Protein kinase domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16970 |
| fragaria_vesca | FvH4_5g20210 FvH4_5g20210 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 |
| malus_domestica | MD04G1051700.v1.1 MD06G1048400.v1.1 MD07G1109800.v1.1 |
| prunus_persica | Prupe.5G058600_v2.0.a1 Prupe.5G058600_v2.0.a1 |
| pyrus_communis | pycom04g04540 pycom06g04150 pycom07g09450 pycom07g09460 |
| rosa_chinensis | RchiOBHm_Chr1g0348071 RchiOBHm_Chr7g0205281 |
| rosa_laevigata | RLG00000003391 RLG00000028693 |
| rosa_multiflora | Rmu_co8277205.1_g000001 Rmu_sc0000253.1_g000018 Rmu_sc0001072.1_g000017 Rmu_sc0002523.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00252510 Rroxscaffold_4G00307260 Rroxscaffold_4G00307270 |
| rosa_rugosa | Rorug01G0192000 Rorug01G0192100 Rorug07G0089300 Rorug07G0089400.1 |
| rosa_samantha | Rh1AG209800 Rh1BG175400 Rh1CG194200 Rh1DG205200 Rh7AG219800 Rh7BG215900 Rh7CG232700 Rh7DG226800 |
| rosa_wichuraiana | Rw1G017500 Rw7G019010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 510, 1559 |
| AatII | GACGTC | 1 cut(s) | 2472 |
| Acc36I | ACCTGC | 1 cut(s) | 328 |
| AccB1I | GGYRCC | 1 cut(s) | 2078 |
| AccI | GTMKAC | 2 cut(s) | 113, 362 |
| AccII | CGCG | 4 cut(s) | 52, 71, 154, 254 |
| AccIII | TCCGGA | 1 cut(s) | 136 |
| AclI | AACGTT | 1 cut(s) | 2561 |
| AclWI | GGATC | 3 cut(s) | 199, 888, 2783 |
| AcoI | YGGCCR | 2 cut(s) | 121, 2592 |
| AcsI | RAATTY | 5 cut(s) | 941, 967, 1162, 1750, 2715 |
| AcuI | CTGAAG | 3 cut(s) | 252, 680, 1561 |
| AcvI | CACGTG | 1 cut(s) | 1861 |
| AcyI | GRCGYC | 1 cut(s) | 2469 |
| AfaI | GTAC | 3 cut(s) | 618, 685, 1826 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 944, 1956, 2048, 2168, 2197, 2506, 2525 |
| AflIII | ACRYGT | 2 cut(s) | 1612, 1860 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2473 |
| AhlI | ACTAGT | 1 cut(s) | 241 |
| AjnI | CCWGG | 4 cut(s) | 747, 1744, 2190, 2272 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1025, 1057, 1167, 1199 |
| Alw21I | GWGCWC | 7 cut(s) | 12, 26, 203, 587, 1731, 2425, 2870 |
| Alw26I | GTCTC | 2 cut(s) | 2319, 2371 |
| Alw44I | GTGCAC | 1 cut(s) | 1727 |
| AlwI | GGATC | 3 cut(s) | 199, 888, 2783 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 962 |
| Ama87I | CYCGRG | 1 cut(s) | 518 |
| Aor13HI | TCCGGA | 1 cut(s) | 136 |
| AoxI | GGCC | 3 cut(s) | 121, 2455, 2592 |
| ApaLI | GTGCAC | 1 cut(s) | 1727 |
| ApeKI | GCWGC | 6 cut(s) | 31, 654, 2345, 2599, 2665, 2797 |
| ApoI | RAATTY | 5 cut(s) | 941, 967, 1162, 1750, 2715 |
| AseI | ATTAAT | 1 cut(s) | 887 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 933, 1182 |
| AspA2I | CCTAGG | 1 cut(s) | 2167 |
| AspLEI | GCGC | 2 cut(s) | 71, 2783 |
| AspS9I | GGNCC | 3 cut(s) | 2024, 2213, 2456 |
| AsuC2I | CCSGG | 2 cut(s) | 1436, 2609 |
| AsuHPI | GGTGA | 4 cut(s) | 416, 1598, 1946, 2479 |
| AsuII | TTCGAA | 1 cut(s) | 344 |
| AvaI | CYCGRG | 1 cut(s) | 518 |
| AvaII | GGWCC | 2 cut(s) | 2024, 2213 |
| AvrII | CCTAGG | 1 cut(s) | 2167 |
| AxyI | CCTNAGG | 1 cut(s) | 1632 |
| BaeGI | GKGCMC | 3 cut(s) | 96, 285, 1731 |
| BalI | TGGCCA | 2 cut(s) | 123, 2594 |
| BanI | GGYRCC | 1 cut(s) | 2078 |
| BanII | GRGCYC | 3 cut(s) | 26, 1699, 2090 |
| BauI | CACGAG | 1 cut(s) | 19 |
| BbrPI | CACGTG | 1 cut(s) | 1861 |
| BbsI | GAAGAC | 3 cut(s) | 516, 620, 825 |
| Bbv12I | GWGCWC | 7 cut(s) | 12, 26, 203, 587, 1731, 2425, 2870 |
| BbvI | GCAGC | 6 cut(s) | 43, 666, 2332, 2586, 2652, 2809 |
| BccI | CCATC | 4 cut(s) | 407, 1448, 2015, 2140 |
| BceAI | ACGGC | 3 cut(s) | 381, 2146, 2638 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 158, 192 |
| BciT130I | CCWGG | 4 cut(s) | 749, 1746, 2192, 2274 |
| BciVI | GTATCC | 2 cut(s) | 1324, 2350 |
| BclI | TGATCA | 2 cut(s) | 2184, 2502 |
| BcnI | CCSGG | 2 cut(s) | 1436, 2609 |
| BcoDI | GTCTC | 2 cut(s) | 2319, 2371 |
| BcuI | ACTAGT | 1 cut(s) | 241 |
| BfaI | CTAG | 6 cut(s) | 132, 242, 321, 698, 1020, 2168 |
| BfmI | CTRYAG | 4 cut(s) | 177, 1269, 2136, 2795 |
| BfuAI | ACCTGC | 1 cut(s) | 328 |
| BfuI | GTATCC | 2 cut(s) | 1324, 2350 |
| BglII | AGATCT | 3 cut(s) | 1654, 2441, 2578 |
| BlnI | CCTAGG | 1 cut(s) | 2167 |
| BlpI | GCTNAGC | 2 cut(s) | 1440, 1806 |
| Bme1390I | CCNGG | 6 cut(s) | 749, 1436, 1746, 2192, 2274, 2609 |
| Bme18I | GGWCC | 2 cut(s) | 2024, 2213 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2473 |
| BmeT110I | CYCGRG | 1 cut(s) | 518 |
| BmgT120I | GGNCC | 3 cut(s) | 2024, 2213, 2456 |
| BmiI | GGNNCC | 6 cut(s) | 492, 1573, 2026, 2080, 2154, 2407 |
| BmrFI | CCNGG | 6 cut(s) | 749, 1436, 1746, 2192, 2274, 2609 |
| BmsI | GCATC | 7 cut(s) | 146, 160, 829, 886, 2191, 2215, 2458 |
| BoxI | GACNNNNGTC | 1 cut(s) | 244 |
| BpiI | GAAGAC | 3 cut(s) | 516, 620, 825 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2475, 2507 |
| BpmI | CTGGAG | 5 cut(s) | 201, 1376, 1652, 2256, 2409 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2089 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1440, 1806 |
| Bpu14I | TTCGAA | 1 cut(s) | 344 |
| BpuEI | CTTGAG | 2 cut(s) | 479, 1550 |
| BpuMI | CCSGG | 2 cut(s) | 1436, 2609 |
| BsaAI | YACGTR | 1 cut(s) | 1861 |
| BsaBI | GATNNNNATC | 2 cut(s) | 160, 510 |
| BsaHI | GRCGYC | 1 cut(s) | 2469 |
| BsaJI | CCNNGG | 8 cut(s) | 191, 252, 1041, 2074, 2082, 2167, 2409, 2765 |
| BsaWI | WCCGGW | 4 cut(s) | 136, 907, 2525, 2533 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 86, 116, 1226, 1256 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 944, 1956, 2048, 2168, 2197, 2506, 2525 |
| Bse1I | ACTGG | 5 cut(s) | 218, 665, 1669, 2332, 2624 |
| Bse21I | CCTNAGG | 1 cut(s) | 1632 |
| Bse3DI | GCAATG | 2 cut(s) | 571, 2553 |
| Bse8I | GATNNNNATC | 2 cut(s) | 160, 510 |
| BseAI | TCCGGA | 1 cut(s) | 136 |
| BseBI | CCWGG | 4 cut(s) | 749, 1746, 2192, 2274 |
| BseDI | CCNNGG | 8 cut(s) | 191, 252, 1041, 2074, 2082, 2167, 2409, 2765 |
| BseGI | GGATG | 7 cut(s) | 164, 431, 844, 1726, 2005, 2116, 2206 |
| BseJI | GATNNNNATC | 2 cut(s) | 160, 510 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 944, 1956, 2048, 2168, 2197, 2506, 2525 |
| BseMI | GCAATG | 2 cut(s) | 571, 2553 |
| BseMII | CTCAG | 5 cut(s) | 39, 1388, 1506, 1623, 2103 |
| BseNI | ACTGG | 5 cut(s) | 218, 665, 1669, 2332, 2624 |
| BseSI | GKGCMC | 3 cut(s) | 96, 285, 1731 |
| BseXI | GCAGC | 6 cut(s) | 43, 666, 2332, 2586, 2652, 2809 |
| BsgI | GTGCAG | 2 cut(s) | 2216, 2585 |
| Bsh1236I | CGCG | 4 cut(s) | 52, 71, 154, 254 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2608 |
| BshFI | GGCC | 3 cut(s) | 123, 2457, 2594 |
| BshNI | GGYRCC | 1 cut(s) | 2078 |
| BsiEI | CGRYCG | 1 cut(s) | 2608 |
| BsiHKAI | GWGCWC | 7 cut(s) | 12, 26, 203, 587, 1731, 2425, 2870 |
| BsiHKCI | CYCGRG | 1 cut(s) | 518 |
| BsiSI | CCGG | 7 cut(s) | 137, 908, 1435, 2481, 2526, 2534, 2608 |
| BslFI | GGGAC | 4 cut(s) | 252, 655, 1862, 2010 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 944, 1956, 2048, 2168, 2197, 2506, 2525 |
| BsmAI | GTCTC | 2 cut(s) | 2319, 2371 |
| BsmFI | GGGAC | 4 cut(s) | 252, 655, 1862, 2010 |
| BsmI | GAATGC | 2 cut(s) | 846, 1106 |
| BsnI | GGCC | 3 cut(s) | 123, 2457, 2594 |
| BsoBI | CYCGRG | 1 cut(s) | 518 |
| Bsp119I | TTCGAA | 1 cut(s) | 344 |
| Bsp13I | TCCGGA | 1 cut(s) | 136 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1440, 1806 |
| Bsp68I | TCGCGA | 1 cut(s) | 154 |
| BspANI | GGCC | 3 cut(s) | 123, 2457, 2594 |
| BspCNI | CTCAG | 5 cut(s) | 38, 1387, 1507, 1624, 2102 |
| BspEI | TCCGGA | 1 cut(s) | 136 |
| BspFNI | CGCG | 4 cut(s) | 52, 71, 154, 254 |
| BspHI | TCATGA | 2 cut(s) | 850, 1984 |
| BspLI | GGNNCC | 6 cut(s) | 492, 1573, 2026, 2080, 2154, 2407 |
| BspMAI | CTGCAG | 2 cut(s) | 181, 2799 |
| BspMI | ACCTGC | 1 cut(s) | 328 |
| BspPI | GGATC | 3 cut(s) | 199, 888, 2783 |
| BspT104I | TTCGAA | 1 cut(s) | 344 |
| BspT107I | GGYRCC | 1 cut(s) | 2078 |
| BsrDI | GCAATG | 2 cut(s) | 571, 2553 |
| BsrI | ACTGG | 5 cut(s) | 218, 665, 1669, 2332, 2624 |
| BssECI | CCNNGG | 8 cut(s) | 191, 252, 1041, 2074, 2082, 2167, 2409, 2765 |
| BssNI | GRCGYC | 1 cut(s) | 2469 |
| BssSI | CACGAG | 1 cut(s) | 19 |
| BssT1I | CCWWGG | 5 cut(s) | 1041, 2074, 2167, 2409, 2765 |
| Bst2BI | CACGAG | 1 cut(s) | 19 |
| Bst2UI | CCWGG | 4 cut(s) | 749, 1746, 2192, 2274 |
| Bst4CI | ACNGT | 4 cut(s) | 57, 185, 1429, 2758 |
| Bst6I | CTCTTC | 2 cut(s) | 1280, 1763 |
| BstACI | GRCGYC | 1 cut(s) | 2469 |
| BstBAI | YACGTR | 1 cut(s) | 1861 |
| BstBI | TTCGAA | 1 cut(s) | 344 |
| BstC8I | GCNNGC | 3 cut(s) | 691, 763, 844 |
| BstDSI | CCRYGG | 1 cut(s) | 252 |
| BstEII | GGTNACC | 1 cut(s) | 1781 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2195 |
| BstF5I | GGATG | 7 cut(s) | 164, 431, 844, 1726, 2005, 2116, 2206 |
| BstFNI | CGCG | 4 cut(s) | 52, 71, 154, 254 |
| BstHHI | GCGC | 2 cut(s) | 71, 2783 |
| BstMAI | GTCTC | 2 cut(s) | 2319, 2371 |
| BstMCI | CGRYCG | 1 cut(s) | 2608 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 263, 1525, 2789, 2826 |
| BstNI | CCWGG | 4 cut(s) | 749, 1746, 2192, 2274 |
| BstNSI | RCATGY | 4 cut(s) | 693, 1313, 1616, 1690 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 244 |
| BstPI | GGTNACC | 1 cut(s) | 1781 |
| BstSCI | CCNGG | 6 cut(s) | 747, 1434, 1744, 2190, 2272, 2607 |
| BstSFI | CTRYAG | 4 cut(s) | 177, 1269, 2136, 2795 |
| BstSLI | GKGCMC | 3 cut(s) | 96, 285, 1731 |
| BstUI | CGCG | 4 cut(s) | 52, 71, 154, 254 |
| BstV1I | GCAGC | 6 cut(s) | 43, 666, 2332, 2586, 2652, 2809 |
| BstV2I | GAAGAC | 3 cut(s) | 516, 620, 825 |
| BstX2I | RGATCY | 3 cut(s) | 1654, 2441, 2578 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1676 |
| BstYI | RGATCY | 3 cut(s) | 1654, 2441, 2578 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1632 |
| BsuI | GTATCC | 2 cut(s) | 1324, 2350 |
| BsuRI | GGCC | 3 cut(s) | 123, 2457, 2594 |
| BtgI | CCRYGG | 1 cut(s) | 252 |
| BtgZI | GCGATG | 1 cut(s) | 169 |
| BtsCI | GGATG | 7 cut(s) | 164, 431, 844, 1726, 2005, 2116, 2206 |
| BtsI | GCAGTG | 1 cut(s) | 2578 |
| BtsIMutI | CAGTG | 7 cut(s) | 190, 987, 1247, 1425, 1676, 2578, 2631 |
| BtuMI | TCGCGA | 1 cut(s) | 154 |
| BveI | ACCTGC | 1 cut(s) | 328 |
| Cac8I | GCNNGC | 3 cut(s) | 691, 763, 844 |
| CaiI | CAGNNNCTG | 1 cut(s) | 962 |
| CciI | TCATGA | 2 cut(s) | 850, 1984 |
| CfoI | GCGC | 2 cut(s) | 71, 2783 |
| Cfr13I | GGNCC | 3 cut(s) | 2024, 2213, 2456 |
| Cfr42I | CCGCGG | 1 cut(s) | 255 |
| CseI | GACGC | 1 cut(s) | 2389 |
| Csp6I | GTAC | 3 cut(s) | 617, 684, 1825 |
| CviQI | GTAC | 3 cut(s) | 617, 684, 1825 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2473 |
| EaeI | YGGCCR | 2 cut(s) | 121, 2592 |
| Eam1104I | CTCTTC | 2 cut(s) | 1280, 1763 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2473 |
| EarI | CTCTTC | 2 cut(s) | 1280, 1763 |
| EciI | GGCGGA | 2 cut(s) | 89, 245 |
| Ecl136II | GAGCTC | 1 cut(s) | 24 |
| Eco130I | CCWWGG | 5 cut(s) | 1041, 2074, 2167, 2409, 2765 |
| Eco24I | GRGCYC | 3 cut(s) | 26, 1699, 2090 |
| Eco32I | GATATC | 1 cut(s) | 2641 |
| Eco47I | GGWCC | 2 cut(s) | 2024, 2213 |
| Eco53kI | GAGCTC | 1 cut(s) | 24 |
| Eco57I | CTGAAG | 3 cut(s) | 252, 680, 1561 |
| Eco72I | CACGTG | 1 cut(s) | 1861 |
| Eco81I | CCTNAGG | 1 cut(s) | 1632 |
| Eco88I | CYCGRG | 1 cut(s) | 518 |
| Eco91I | GGTNACC | 1 cut(s) | 1781 |
| EcoICRI | GAGCTC | 1 cut(s) | 24 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2195 |
| EcoO65I | GGTNACC | 1 cut(s) | 1781 |
| EcoRII | CCWGG | 4 cut(s) | 747, 1744, 2190, 2272 |
| EcoRV | GATATC | 1 cut(s) | 2641 |
| EcoT14I | CCWWGG | 5 cut(s) | 1041, 2074, 2167, 2409, 2765 |
| EcoT22I | ATGCAT | 1 cut(s) | 597 |
| EcoT38I | GRGCYC | 3 cut(s) | 26, 1699, 2090 |
| ErhI | CCWWGG | 5 cut(s) | 1041, 2074, 2167, 2409, 2765 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2503, 2535 |
| FaqI | GGGAC | 4 cut(s) | 252, 655, 1862, 2010 |
| FauI | CCCGC | 2 cut(s) | 136, 2004 |
| FbaI | TGATCA | 2 cut(s) | 2184, 2502 |
| FblI | GTMKAC | 2 cut(s) | 113, 362 |
| FokI | GGATG | 7 cut(s) | 151, 438, 851, 1733, 2012, 2123, 2213 |
| FriOI | GRGCYC | 3 cut(s) | 26, 1699, 2090 |
| FspBI | CTAG | 6 cut(s) | 132, 242, 321, 698, 1020, 2168 |
| GlaI | GCGC | 2 cut(s) | 70, 2782 |
| GsuI | CTGGAG | 5 cut(s) | 201, 1376, 1652, 2256, 2409 |
| HaeIII | GGCC | 3 cut(s) | 123, 2457, 2594 |
| HapII | CCGG | 7 cut(s) | 137, 908, 1435, 2481, 2526, 2534, 2608 |
| HgaI | GACGC | 1 cut(s) | 2389 |
| HhaI | GCGC | 2 cut(s) | 71, 2783 |
| Hin1I | GRCGYC | 1 cut(s) | 2469 |
| Hin6I | GCGC | 2 cut(s) | 69, 2781 |
| HinP1I | GCGC | 2 cut(s) | 69, 2781 |
| HincII | GTYRAC | 4 cut(s) | 114, 363, 1219, 2467 |
| HindII | GTYRAC | 4 cut(s) | 114, 363, 1219, 2467 |
| HindIII | AAGCTT | 2 cut(s) | 870, 986 |
| HpaI | GTTAAC | 1 cut(s) | 1219 |
| HpaII | CCGG | 7 cut(s) | 137, 908, 1435, 2481, 2526, 2534, 2608 |
| HphI | GGTGA | 4 cut(s) | 416, 1598, 1946, 2479 |
| Hpy99I | CGWCG | 4 cut(s) | 57, 367, 1138, 2405 |
| HpyCH4III | ACNGT | 4 cut(s) | 57, 185, 1429, 2758 |
| HpyCH4IV | ACGT | 4 cut(s) | 615, 1860, 2469, 2561 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 263, 1525, 2789, 2826 |
| HpySE526I | ACGT | 4 cut(s) | 615, 1860, 2469, 2561 |
| Hsp92I | GRCGYC | 1 cut(s) | 2469 |
| HspAI | GCGC | 2 cut(s) | 69, 2781 |
| Kpn2I | TCCGGA | 1 cut(s) | 136 |
| Ksp22I | TGATCA | 2 cut(s) | 2184, 2502 |
| KspAI | GTTAAC | 1 cut(s) | 1219 |
| KspI | CCGCGG | 1 cut(s) | 255 |
| LmnI | GCTCC | 3 cut(s) | 107, 1671, 2428 |
| Lsp1109I | GCAGC | 6 cut(s) | 43, 666, 2332, 2586, 2652, 2809 |
| LweI | GCATC | 7 cut(s) | 146, 160, 829, 886, 2191, 2215, 2458 |
| MaeI | CTAG | 6 cut(s) | 132, 242, 321, 698, 1020, 2168 |
| MaeII | ACGT | 4 cut(s) | 615, 1860, 2469, 2561 |
| MaeIII | GTNAC | 4 cut(s) | 1781, 1927, 2485, 2562 |
| MfeI | CAATTG | 3 cut(s) | 97, 636, 1830 |
| MflI | RGATCY | 3 cut(s) | 1654, 2441, 2578 |
| MlsI | TGGCCA | 2 cut(s) | 123, 2594 |
| MluNI | TGGCCA | 2 cut(s) | 123, 2594 |
| MlyI | GAGTC | 5 cut(s) | 530, 1010, 1082, 1202, 2493 |
| MmeI | TCCRAC | 1 cut(s) | 2383 |
| Mox20I | TGGCCA | 2 cut(s) | 123, 2594 |
| Mph1103I | ATGCAT | 1 cut(s) | 597 |
| MroI | TCCGGA | 1 cut(s) | 136 |
| MroXI | GAANNNNTTC | 2 cut(s) | 933, 1182 |
| MscI | TGGCCA | 2 cut(s) | 123, 2594 |
| MseI | TTAA | 6 cut(s) | 590, 887, 1218, 1473, 1701, 1740 |
| MslI | CAYNNNNRTG | 2 cut(s) | 590, 1734 |
| Msp20I | TGGCCA | 2 cut(s) | 123, 2594 |
| MspA1I | CMGCKG | 4 cut(s) | 34, 254, 1354, 2345 |
| MspI | CCGG | 7 cut(s) | 137, 908, 1435, 2481, 2526, 2534, 2608 |
| MspR9I | CCNGG | 6 cut(s) | 749, 1436, 1746, 2192, 2274, 2609 |
| MunI | CAATTG | 3 cut(s) | 97, 636, 1830 |
| Mva1269I | GAATGC | 2 cut(s) | 846, 1106 |
| MvaI | CCWGG | 4 cut(s) | 749, 1746, 2192, 2274 |
| MvnI | CGCG | 4 cut(s) | 52, 71, 154, 254 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 263, 1525, 2789, 2826 |
| NciI | CCSGG | 2 cut(s) | 1436, 2609 |
| NlaIV | GGNNCC | 6 cut(s) | 492, 1573, 2026, 2080, 2154, 2407 |
| NmeAIII | GCCGAG | 1 cut(s) | 2107 |
| NmuCI | GTSAC | 1 cut(s) | 2485 |
| NruI | TCGCGA | 1 cut(s) | 154 |
| NsiI | ATGCAT | 1 cut(s) | 597 |
| NspI | RCATGY | 4 cut(s) | 693, 1313, 1616, 1690 |
| NspV | TTCGAA | 1 cut(s) | 344 |
| PaeI | GCATGC | 1 cut(s) | 693 |
| PagI | TCATGA | 2 cut(s) | 850, 1984 |
| PciI | ACATGT | 1 cut(s) | 1612 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 350, 368 |
| PctI | GAATGC | 2 cut(s) | 846, 1106 |
| PdmI | GAANNNNTTC | 2 cut(s) | 933, 1182 |
| PfeI | GAWTC | 5 cut(s) | 647, 1237, 1970, 2415, 2612 |
| PleI | GAGTC | 5 cut(s) | 529, 1010, 1081, 1201, 2492 |
| PmaCI | CACGTG | 1 cut(s) | 1861 |
| PmlI | CACGTG | 1 cut(s) | 1861 |
| PpsI | GAGTC | 5 cut(s) | 529, 1010, 1081, 1201, 2492 |
| Ppu21I | YACGTR | 1 cut(s) | 1861 |
| PscI | ACATGT | 1 cut(s) | 1612 |
| PshAI | GACNNNNGTC | 1 cut(s) | 244 |
| PshBI | ATTAAT | 1 cut(s) | 887 |
| PsiI | TTATAA | 2 cut(s) | 510, 1559 |
| Psp124BI | GAGCTC | 1 cut(s) | 26 |
| Psp1406I | AACGTT | 1 cut(s) | 2561 |
| Psp6I | CCWGG | 4 cut(s) | 747, 1744, 2190, 2272 |
| PspCI | CACGTG | 1 cut(s) | 1861 |
| PspEI | GGTNACC | 1 cut(s) | 1781 |
| PspGI | CCWGG | 4 cut(s) | 747, 1744, 2190, 2272 |
| PspN4I | GGNNCC | 6 cut(s) | 492, 1573, 2026, 2080, 2154, 2407 |
| PspPI | GGNCC | 3 cut(s) | 2024, 2213, 2456 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 2119, 2151, 2506, 2538 |
| PstI | CTGCAG | 2 cut(s) | 181, 2799 |
| PstNI | CAGNNNCTG | 1 cut(s) | 962 |
| PsuI | RGATCY | 3 cut(s) | 1654, 2441, 2578 |
| PvuII | CAGCTG | 1 cut(s) | 1354 |
| RruI | TCGCGA | 1 cut(s) | 154 |
| RsaI | GTAC | 3 cut(s) | 618, 685, 1826 |
| RsaNI | GTAC | 3 cut(s) | 617, 684, 1825 |
| RseI | CAYNNNNRTG | 2 cut(s) | 590, 1734 |
| SacI | GAGCTC | 1 cut(s) | 26 |
| SacII | CCGCGG | 1 cut(s) | 255 |
| SalI | GTCGAC | 2 cut(s) | 112, 361 |
| SaqAI | TTAA | 6 cut(s) | 590, 887, 1218, 1473, 1701, 1740 |
| Sau96I | GGNCC | 3 cut(s) | 2024, 2213, 2456 |
| SchI | GAGTC | 5 cut(s) | 530, 1010, 1082, 1202, 2493 |
| ScrFI | CCNGG | 6 cut(s) | 749, 1436, 1746, 2192, 2274, 2609 |
| SfaNI | GCATC | 7 cut(s) | 146, 160, 829, 886, 2191, 2215, 2458 |
| SfcI | CTRYAG | 4 cut(s) | 177, 1269, 2136, 2795 |
| Sfr303I | CCGCGG | 1 cut(s) | 255 |
| SfuI | TTCGAA | 1 cut(s) | 344 |
| SgrBI | CCGCGG | 1 cut(s) | 255 |
| SinI | GGWCC | 2 cut(s) | 2024, 2213 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 590, 1734 |
| SmlI | CTYRAG | 2 cut(s) | 458, 1529 |
| SmoI | CTYRAG | 2 cut(s) | 458, 1529 |
| SpeI | ACTAGT | 1 cut(s) | 241 |
| SphI | GCATGC | 1 cut(s) | 693 |
| SspI | AATATT | 1 cut(s) | 1464 |
| SspMI | CTAG | 6 cut(s) | 132, 242, 321, 698, 1020, 2168 |
| SstI | GAGCTC | 1 cut(s) | 26 |
| StyD4I | CCNGG | 6 cut(s) | 747, 1434, 1744, 2190, 2272, 2607 |
| StyI | CCWWGG | 5 cut(s) | 1041, 2074, 2167, 2409, 2765 |
| TaaI | ACNGT | 4 cut(s) | 57, 185, 1429, 2758 |
| TaiI | ACGT | 4 cut(s) | 618, 1863, 2472, 2564 |
| TaqI | TCGA | 6 cut(s) | 113, 203, 344, 362, 581, 2733 |
| TaqII | GACCGA | 1 cut(s) | 2201 |
| TatI | WGTACW | 1 cut(s) | 1824 |
| TauI | GCSGC | 6 cut(s) | 37, 74, 254, 257, 371, 2267 |
| TfiI | GAWTC | 5 cut(s) | 647, 1237, 1970, 2415, 2612 |
| Tru1I | TTAA | 6 cut(s) | 590, 887, 1218, 1473, 1701, 1740 |
| Tru9I | TTAA | 6 cut(s) | 590, 887, 1218, 1473, 1701, 1740 |
| TscAI | CASTG | 7 cut(s) | 190, 987, 1247, 1432, 1676, 2578, 2631 |
| TseFI | GTSAC | 1 cut(s) | 2485 |
| TseI | GCWGC | 6 cut(s) | 31, 654, 2345, 2599, 2665, 2797 |
| Tsp45I | GTSAC | 1 cut(s) | 2485 |
| TspGWI | ACGGA | 5 cut(s) | 94, 343, 893, 1926, 2408 |
| TspRI | CASTG | 7 cut(s) | 190, 987, 1247, 1432, 1676, 2578, 2631 |
| VneI | GTGCAC | 1 cut(s) | 1727 |
| VpaK11BI | GGWCC | 2 cut(s) | 2024, 2213 |
| VspI | ATTAAT | 1 cut(s) | 887 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2195 |
| XapI | RAATTY | 5 cut(s) | 941, 967, 1162, 1750, 2715 |
| XbaI | TCTAGA | 1 cut(s) | 1019 |
| XceI | RCATGY | 4 cut(s) | 693, 1313, 1616, 1690 |
| XmaJI | CCTAGG | 1 cut(s) | 2167 |
| XmiI | GTMKAC | 2 cut(s) | 113, 362 |
| XmnI | GAANNNNTTC | 2 cut(s) | 933, 1182 |
| XspI | CTAG | 6 cut(s) | 132, 242, 321, 698, 1020, 2168 |
| ZraI | GACGTC | 1 cut(s) | 2470 |
| Zsp2I | ATGCAT | 1 cut(s) | 597 |