Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002088

Physical Location & Seq

Genomic Coordinates Forward (+)

26646534 .. 26649142

Gene Structure 2609 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0192000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGAGGCACTCAATAGCATTTTCCTACTAGGCCTTTGCCTTCTCTTTGCTTCATCGGCAATGTCGACCTTGGCCGATCCCAAAGCTCACCACCATGAATTTGTTATCCAAGCAACACCAGTGAAGAGGCTGTGCAAGATCCACAACACCATCACAGTGAATGGACAGTTCCCTGGACCAACCTTGGATGTAAACAATGGCGACACTCTGGTCGTCAAAGTCACTAACAAAGCTCGATATAATGTCACCATTCACTGGCATGGCATTCGGCAAATGAGAACCGGATGGGCGGATGGGCCCGAGTTTGTTACTCAATGTCCTATTAGACCAGGAGGGAGTTACACCTACCGGTTCACAGTCCAAGGTCAAGAAGGTACTCTGTGGTGGCACGCTCATAGCTCATGGCTTAGAGCCACCGTGTATGGAGCACTTATTATTCATCCGAAACAAGGAGACTCGTATCCATTCACTAAACCGAATCGTCAAGCAACACTTCTTCTTGGTGAGTGGTGGGATGGTAACCCTATTGACGTGGTGAGGAGGGCGACTCGCACAGGAGCAGCTCCAAATGTTTCTAACGCATATACCATTAACGGTCAACCCGGAGATCTTTACAGTTGCTCCAGCAAAGGCACCGTCATAGTTCCAATAGACTCTGGTGAGACCAACCTACTGAGAGTGATAAACGCCGCCCTCAACCAACCTCTTTTCTTCTCCGTCGCCAACCATAAACTGACTGTGGTTGGTGCTGATGCCTCGTACACCAAGCCTTTCACCACCAATGTTCTCATGCTAGGCCCAGGCCAGACTACTGATGTTTTAATCACCGGGGACCAGCCACCATCTCGATACTACTTGGCGGCGAGTGCCTATTTCAGTGCACAAAATGCTGCATTTGACAACACCACCACCACAGCCATTCTTGAATACAAGTCCGTTCGTTGCAACACTACAAGTTGCAAAAAGGGTAAAACAGTAATTAAACCCACAATGCCAAAGCTGCCAGCTTTCAATGACACAAACACTGCATCTGCCTTCACTAAGAGCTTCAGAAGCCCTAGAAAAGTCGAAGTCCCAACTGAAATCGACGAGAACCTCTTCTTCACAATCGGTCTCGGACTCAACAAATGCCCCAAGCACTTTCGATCTAGAAGATGCCAAGGCCCCAATGGCACGCGCTTCACTGCTAGCATGAACAATGTCTCATTTGTGCTTCCAAACAACTTGTCAATTCTCCAAGCTTACCAGCAAAACATTCCTGGAGTTTACACTAGTGATTTTCCAGCCAACCCGCCACGGAAGTTTGATTATACTGGGAATGTCAGCCGCTCGCTTTGGCAACCCAGTTCTGGAACAAAGGCATACAAGTTGAAGTACGGGTCTAGGGTGCAGGTGGTGTTACAAGACACAAGTATTGTCACACCCGAGAACCATCCCATTCATCTCCACGGTTATGATTTCTACATCCTTGCAGAGGGTTTTGGAAATTTCAACCCCAAGACTGATACTAAAATGTTTAATCTTGTTGATCCACCTCTAAGGAACACGGTCGCGGTGCCCGTAAATGGTTGGGCAGTCATCAGATTTGTAGCTGACAATCCAGGTGCTTGGATGATGCATTGTCACTTGGATGTTCATATCAACTGGGGTTTGGCCATGGTTTTCTTGGTGGACAATGGAGTTGGGGAGCTGCAATCAATAGAGCCACCGCCAGCGGATTATCCTCTGTGTTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

Pkinase

Protein Analysis

578

Amino Acids

63.83

Weight (kDa)

9.12

Isoelectric Point (pI)

33.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	36 - 150	9.3e-45	Multicopper oxidase
Cu-oxidase	PF00394	163 - 311	9.1e-41	Multicopper oxidase
Cu-oxidase_2	PF07731	426 - 559	2e-43	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16970
fragaria_vesca	FvH4_5g20210 FvH4_5g20210 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370
malus_domestica	MD04G1051700.v1.1 MD06G1048400.v1.1 MD07G1109800.v1.1
prunus_persica	Prupe.5G058600_v2.0.a1 Prupe.5G058600_v2.0.a1
pyrus_communis	pycom04g04540 pycom06g04150 pycom07g09450 pycom07g09460
rosa_chinensis	RchiOBHm_Chr1g0348071 RchiOBHm_Chr7g0205281
rosa_laevigata	RLG00000003391 RLG00000028693
rosa_multiflora	Rmu_co8277205.1_g000001 Rmu_sc0000253.1_g000018 Rmu_sc0001072.1_g000017 Rmu_sc0002523.1_g000002
rosa_roxburghii	Rroxscaffold_3G00252510 Rroxscaffold_4G00307260 Rroxscaffold_4G00307270
rosa_rugosa	Rorug01G0192000 Rorug01G0192100 Rorug07G0089300 Rorug07G0089400.1
rosa_samantha	Rh1AG209800 Rh1BG175400 Rh1CG194200 Rh1DG205200 Rh7AG219800 Rh7BG215900 Rh7CG232700 Rh7DG226800
rosa_wichuraiana	Rw1G017500 Rw7G019010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1381
AasI	GACNNNNNNGTC	1 cut(s)	209
Acc36I	ACCTGC	1 cut(s)	1381
AccB1I	GGYRCC	2 cut(s)	632, 1555
AccB7I	CCANNNNNTGG	1 cut(s)	255
AccBSI	CCGCTC	1 cut(s)	1329
AccI	GTMKAC	1 cut(s)	65
AccII	CGCG	2 cut(s)	1177, 1553
AciI	CCGC	8 cut(s)	290, 690, 860, 1292, 1327, 1553, 1709, 1715
AclWI	GGATC	3 cut(s)	71, 133, 1523
AcoI	YGGCCR	2 cut(s)	72, 1653
AcsI	RAATTY	2 cut(s)	98, 1486
AcuI	CTGAAG	1 cut(s)	1033
AfaI	GTAC	3 cut(s)	376, 761, 1376
AfiI	CCNNNNNNNGG	5 cut(s)	255, 449, 1349, 1474, 1565
AgeI	ACCGGT	1 cut(s)	348
AgsI	TTSAA	4 cut(s)	926, 1012, 1372, 1492
AhlI	ACTAGT	1 cut(s)	1271
AjiI	CACGTC	1 cut(s)	532
AjnI	CCWGG	5 cut(s)	172, 328, 799, 1258, 1600
Alw21I	GWGCWC	2 cut(s)	430, 883
Alw26I	GTCTC	4 cut(s)	447, 656, 1118, 1207
Alw44I	GTGCAC	1 cut(s)	879
AlwI	GGATC	3 cut(s)	71, 133, 1523
Ama87I	CYCGRG	2 cut(s)	299, 1424
AoxI	GGCC	7 cut(s)	31, 72, 296, 796, 802, 1162, 1653
ApaI	GGGCCC	1 cut(s)	300
ApaLI	GTGCAC	1 cut(s)	879
ApeKI	GCWGC	4 cut(s)	560, 890, 1000, 1690
ApoI	RAATTY	2 cut(s)	98, 1486
ArsI	GACNNNNNNTTYG	4 cut(s)	621, 653, 1211, 1243
AsiGI	ACCGGT	1 cut(s)	348
Asp700I	GAANNNNTTC	1 cut(s)	1097
AspLEI	GCGC	1 cut(s)	1179
AspS9I	GGNCC	6 cut(s)	176, 296, 297, 797, 832, 1163
AsuC2I	CCSGG	2 cut(s)	603, 829
AsuHPI	GGTGA	7 cut(s)	80, 238, 515, 547, 671, 766, 817
AsuNHI	GCTAGC	1 cut(s)	1187
AvaI	CYCGRG	2 cut(s)	299, 1424
AvaII	GGWCC	2 cut(s)	176, 832
BaeGI	GKGCMC	3 cut(s)	300, 883, 1560
BalI	TGGCCA	1 cut(s)	1655
BanI	GGYRCC	2 cut(s)	632, 1555
BanII	GRGCYC	1 cut(s)	300
Bbv12I	GWGCWC	2 cut(s)	430, 883
BbvI	GCAGC	4 cut(s)	572, 877, 987, 1677
BccI	CCATC	6 cut(s)	158, 279, 287, 509, 850, 1440
BcgI	CGANNNNNNTGC	2 cut(s)	248, 282
BciT130I	CCWGG	5 cut(s)	174, 330, 801, 1260, 1602
BciVI	GTATCC	1 cut(s)	471
BcnI	CCSGG	2 cut(s)	603, 829
BcoDI	GTCTC	4 cut(s)	447, 656, 1118, 1207
BcuI	ACTAGT	1 cut(s)	1271
BfaI	CTAG	7 cut(s)	29, 794, 1059, 1149, 1188, 1272, 1383
BfuAI	ACCTGC	1 cut(s)	1381
BfuI	GTATCC	1 cut(s)	471
BglI	GCCNNNNNGGC	1 cut(s)	1170
BglII	AGATCT	1 cut(s)	607
BisI	GCNGC	7 cut(s)	561, 690, 861, 891, 1001, 1327, 1691
BlsI	GCNGC	7 cut(s)	562, 691, 862, 892, 1002, 1328, 1692
Bme1390I	CCNGG	7 cut(s)	174, 330, 603, 801, 829, 1260, 1602
Bme18I	GGWCC	2 cut(s)	176, 832
BmeT110I	CYCGRG	2 cut(s)	299, 1424
BmgBI	CACGTC	1 cut(s)	532
BmgT120I	GGNCC	6 cut(s)	176, 296, 297, 797, 832, 1163
BmiI	GGNNCC	5 cut(s)	298, 634, 833, 1165, 1557
BmrFI	CCNGG	7 cut(s)	174, 330, 603, 801, 829, 1260, 1602
BmrI	ACTGGG	3 cut(s)	1323, 1338, 1654
BmsI	GCATC	4 cut(s)	742, 1037, 1145, 1605
BmtI	GCTAGC	1 cut(s)	1191
BmuI	ACTGGG	3 cut(s)	1323, 1338, 1654
BplI	GAGNNNNNCTC	2 cut(s)	532, 564
BpmI	CTGGAG	2 cut(s)	607, 1281
BpuMI	CCSGG	2 cut(s)	603, 829
BsaI	GGTCTC	2 cut(s)	656, 1118
BsaWI	WCCGGW	2 cut(s)	281, 348
BsaXI	ACNNNNNCTCC	2 cut(s)	605, 635
Bsc4I	CCNNNNNNNGG	5 cut(s)	255, 449, 1349, 1474, 1565
Bse118I	RCCGGY	1 cut(s)	348
Bse1I	ACTGG	5 cut(s)	119, 260, 1318, 1344, 1649
Bse3DI	GCAATG	1 cut(s)	66
BseBI	CCWGG	5 cut(s)	174, 330, 801, 1260, 1602
BseGI	GGATG	9 cut(s)	193, 290, 298, 439, 520, 1432, 1464, 1617, 1636
BseLI	CCNNNNNNNGG	5 cut(s)	255, 449, 1349, 1474, 1565
BseMI	GCAATG	1 cut(s)	66
BseMII	CTCAG	1 cut(s)	665
BseNI	ACTGG	5 cut(s)	119, 260, 1318, 1344, 1649
BseRI	GAGGAG	1 cut(s)	553
BseSI	GKGCMC	3 cut(s)	300, 883, 1560
BseXI	GCAGC	4 cut(s)	572, 877, 987, 1677
BsgI	GTGCAG	1 cut(s)	1409
Bsh1236I	CGCG	2 cut(s)	1177, 1553
Bsh1285I	CGRYCG	1 cut(s)	1551
BshFI	GGCC	7 cut(s)	33, 74, 298, 798, 804, 1164, 1655
BshNI	GGYRCC	2 cut(s)	632, 1555
BshTI	ACCGGT	1 cut(s)	348
BsiEI	CGRYCG	1 cut(s)	1551
BsiHKAI	GWGCWC	2 cut(s)	430, 883
BsiHKCI	CYCGRG	2 cut(s)	299, 1424
BsiSI	CCGG	4 cut(s)	282, 349, 603, 828
BslFI	GGGAC	2 cut(s)	845, 1058
BslI	CCNNNNNNNGG	5 cut(s)	255, 449, 1349, 1474, 1565
BsmAI	GTCTC	4 cut(s)	447, 656, 1118, 1207
BsmFI	GGGAC	2 cut(s)	845, 1058
BsmI	GAATGC	1 cut(s)	264
BsnI	GGCC	7 cut(s)	33, 74, 298, 798, 804, 1164, 1655
Bso31I	GGTCTC	2 cut(s)	656, 1118
BsoBI	CYCGRG	2 cut(s)	299, 1424
Bsp120I	GGGCCC	1 cut(s)	296
Bsp1286I	GDGCHC	4 cut(s)	300, 430, 883, 1560
Bsp143I	GATC	5 cut(s)	76, 138, 607, 1145, 1528
Bsp19I	CCATGG	1 cut(s)	1656
BspACI	CCGC	8 cut(s)	290, 690, 860, 1292, 1327, 1553, 1709, 1715
BspANI	GGCC	7 cut(s)	33, 74, 298, 798, 804, 1164, 1655
BspCNI	CTCAG	1 cut(s)	666
BspFNI	CGCG	2 cut(s)	1177, 1553
BspLI	GGNNCC	5 cut(s)	298, 634, 833, 1165, 1557
BspMI	ACCTGC	1 cut(s)	1381
BspOI	GCTAGC	1 cut(s)	1191
BspPI	GGATC	3 cut(s)	71, 133, 1523
BspT107I	GGYRCC	2 cut(s)	632, 1555
BspTNI	GGTCTC	2 cut(s)	656, 1118
BsrBI	CCGCTC	1 cut(s)	1329
BsrDI	GCAATG	1 cut(s)	66
BsrFI	RCCGGY	1 cut(s)	348
BsrI	ACTGG	5 cut(s)	119, 260, 1318, 1344, 1649
BssAI	RCCGGY	1 cut(s)	348
BssMI	GATC	5 cut(s)	76, 138, 607, 1145, 1528
BssT1I	CCWWGG	5 cut(s)	69, 183, 361, 1159, 1656
Bst2UI	CCWGG	5 cut(s)	174, 330, 801, 1260, 1602
Bst6I	CTCTTC	2 cut(s)	119, 1103
BstAPI	GCANNNNNTGC	1 cut(s)	887
BstC8I	GCNNGC	6 cut(s)	390, 1005, 1175, 1189, 1331, 1713
BstDEI	CTNAG	4 cut(s)	407, 674, 1041, 1538
BstDSI	CCRYGG	3 cut(s)	1295, 1447, 1656
BstEII	GGTNACC	1 cut(s)	518
BstENI	CCTNNNNNAGG	1 cut(s)	1472
BstF5I	GGATG	9 cut(s)	193, 290, 298, 439, 520, 1432, 1464, 1617, 1636
BstFNI	CGCG	2 cut(s)	1177, 1553
BstHHI	GCGC	1 cut(s)	1179
BstKTI	GATC	5 cut(s)	79, 141, 610, 1148, 1531
BstMAI	GTCTC	4 cut(s)	447, 656, 1118, 1207
BstMBI	GATC	5 cut(s)	76, 138, 607, 1145, 1528
BstMCI	CGRYCG	1 cut(s)	1551
BstMWI	GCNNNNNNNGC	6 cut(s)	56, 866, 887, 1000, 1053, 1170
BstNI	CCWGG	5 cut(s)	174, 330, 801, 1260, 1602
BstPI	GGTNACC	1 cut(s)	518
BstSCI	CCNGG	7 cut(s)	172, 328, 601, 799, 827, 1258, 1600
BstSLI	GKGCMC	3 cut(s)	300, 883, 1560
BstUI	CGCG	2 cut(s)	1177, 1553
BstV1I	GCAGC	4 cut(s)	572, 877, 987, 1677
BstX2I	RGATCY	2 cut(s)	138, 607
BstXI	CCANNNNNNTGG	1 cut(s)	1608
BstYI	RGATCY	2 cut(s)	138, 607
BsuI	GTATCC	1 cut(s)	471
BsuRI	GGCC	7 cut(s)	33, 74, 298, 798, 804, 1164, 1655
BtgI	CCRYGG	3 cut(s)	1295, 1447, 1656
BtrI	CACGTC	1 cut(s)	532
BtsCI	GGATG	9 cut(s)	193, 290, 298, 439, 520, 1432, 1464, 1617, 1636
BtsI	GCAGTG	2 cut(s)	1023, 1182
BtsIMutI	CAGTG	6 cut(s)	126, 162, 253, 883, 1023, 1182
BveI	ACCTGC	1 cut(s)	1381
Cac8I	GCNNGC	6 cut(s)	390, 1005, 1175, 1189, 1331, 1713
CfoI	GCGC	1 cut(s)	1179
Cfr10I	RCCGGY	1 cut(s)	348
Cfr13I	GGNCC	6 cut(s)	176, 296, 297, 797, 832, 1163
Csp6I	GTAC	3 cut(s)	375, 760, 1375
CspAI	ACCGGT	1 cut(s)	348
CviAII	CATG	6 cut(s)	95, 260, 402, 790, 1192, 1657
CviQI	GTAC	3 cut(s)	375, 760, 1375
DdeI	CTNAG	4 cut(s)	407, 674, 1041, 1538
DpnI	GATC	5 cut(s)	78, 140, 609, 1147, 1530
DpnII	GATC	5 cut(s)	76, 138, 607, 1145, 1528
DrdI	GACNNNNNNGTC	1 cut(s)	209
DseDI	GACNNNNNNGTC	1 cut(s)	209
EaeI	YGGCCR	2 cut(s)	72, 1653
Eam1104I	CTCTTC	2 cut(s)	119, 1103
EarI	CTCTTC	2 cut(s)	119, 1103
EciI	GGCGGA	1 cut(s)	305
Eco130I	CCWWGG	5 cut(s)	69, 183, 361, 1159, 1656
Eco147I	AGGCCT	1 cut(s)	33
Eco24I	GRGCYC	1 cut(s)	300
Eco31I	GGTCTC	2 cut(s)	656, 1118
Eco47I	GGWCC	2 cut(s)	176, 832
Eco57I	CTGAAG	1 cut(s)	1033
Eco88I	CYCGRG	2 cut(s)	299, 1424
Eco91I	GGTNACC	1 cut(s)	518
EcoNI	CCTNNNNNAGG	1 cut(s)	1472
EcoO109I	RGGNCCY	1 cut(s)	1163
EcoO65I	GGTNACC	1 cut(s)	518
EcoRII	CCWGG	5 cut(s)	172, 328, 799, 1258, 1600
EcoT14I	CCWWGG	5 cut(s)	69, 183, 361, 1159, 1656
EcoT22I	ATGCAT	1 cut(s)	1620
EcoT38I	GRGCYC	1 cut(s)	300
ErhI	CCWWGG	5 cut(s)	69, 183, 361, 1159, 1656
FaeI	CATG	6 cut(s)	98, 263, 405, 793, 1195, 1660
FalI	AAGNNNNNCTT	2 cut(s)	477, 509
FaqI	GGGAC	2 cut(s)	845, 1058
FatI	CATG	6 cut(s)	94, 259, 401, 789, 1191, 1656
FauI	CCCGC	1 cut(s)	1299
FblI	GTMKAC	1 cut(s)	65
Fnu4HI	GCNGC	7 cut(s)	561, 690, 861, 891, 1001, 1327, 1691
FokI	GGATG	9 cut(s)	200, 297, 305, 426, 527, 1419, 1451, 1624, 1643
FriOI	GRGCYC	1 cut(s)	300
Fsp4HI	GCNGC	7 cut(s)	561, 690, 861, 891, 1001, 1327, 1691
FspBI	CTAG	7 cut(s)	29, 794, 1059, 1149, 1188, 1272, 1383
GlaI	GCGC	1 cut(s)	1178
GluI	GCNGC	7 cut(s)	561, 690, 861, 891, 1001, 1327, 1691
GsuI	CTGGAG	2 cut(s)	607, 1281
HaeIII	GGCC	7 cut(s)	33, 74, 298, 798, 804, 1164, 1655
HapII	CCGG	4 cut(s)	282, 349, 603, 828
HhaI	GCGC	1 cut(s)	1179
Hin1II	CATG	6 cut(s)	98, 263, 405, 793, 1195, 1660
Hin6I	GCGC	1 cut(s)	1177
HinP1I	GCGC	1 cut(s)	1177
HincII	GTYRAC	2 cut(s)	66, 599
HindII	GTYRAC	2 cut(s)	66, 599
HindIII	AAGCTT	1 cut(s)	1239
HinfI	GANTC	5 cut(s)	455, 478, 547, 653, 1119
HpaII	CCGG	4 cut(s)	282, 349, 603, 828
HphI	GGTGA	7 cut(s)	80, 238, 515, 547, 671, 766, 817
Hpy166II	GTNNAC	8 cut(s)	66, 193, 354, 599, 762, 881, 1267, 1672
Hpy188I	TCNGA	4 cut(s)	444, 1052, 1118, 1583
Hpy188III	TCNNGA	5 cut(s)	368, 846, 923, 1149, 1350
Hpy8I	GTNNAC	8 cut(s)	66, 193, 354, 599, 762, 881, 1267, 1672
Hpy99I	CGWCG	2 cut(s)	722, 1091
HpyAV	CCTTC	3 cut(s)	50, 365, 1045
HpyCH4IV	ACGT	1 cut(s)	531
HpyF10VI	GCNNNNNNNGC	6 cut(s)	56, 866, 887, 1000, 1053, 1170
HpyF3I	CTNAG	4 cut(s)	407, 674, 1041, 1538
HpySE526I	ACGT	1 cut(s)	531
Hsp92II	CATG	6 cut(s)	98, 263, 405, 793, 1195, 1660
HspAI	GCGC	1 cut(s)	1177
Kzo9I	GATC	5 cut(s)	76, 138, 607, 1145, 1528
LmnI	GCTCC	5 cut(s)	425, 557, 568, 626, 1687
Lsp1109I	GCAGC	4 cut(s)	572, 877, 987, 1677
LweI	GCATC	4 cut(s)	742, 1037, 1145, 1605
MaeI	CTAG	7 cut(s)	29, 794, 1059, 1149, 1188, 1272, 1383
MaeII	ACGT	1 cut(s)	531
MaeIII	GTNAC	8 cut(s)	220, 244, 307, 338, 518, 1398, 1417, 1622
MalI	GATC	5 cut(s)	78, 140, 609, 1147, 1530
MbiI	CCGCTC	1 cut(s)	1329
MboI	GATC	5 cut(s)	76, 138, 607, 1145, 1528
MboII	GAAGA	6 cut(s)	136, 488, 703, 1090, 1093, 1164
MflI	RGATCY	2 cut(s)	138, 607
MhlI	GDGCHC	4 cut(s)	300, 430, 883, 1560
MlsI	TGGCCA	1 cut(s)	1655
MluCI	AATT	4 cut(s)	98, 978, 1230, 1486
MluNI	TGGCCA	1 cut(s)	1655
MlyI	GAGTC	4 cut(s)	449, 541, 647, 1113
Mox20I	TGGCCA	1 cut(s)	1655
Mph1103I	ATGCAT	1 cut(s)	1620
MroXI	GAANNNNTTC	1 cut(s)	1097
MscI	TGGCCA	1 cut(s)	1655
MseI	TTAA	4 cut(s)	591, 821, 981, 1518
MslI	CAYNNNNRTG	5 cut(s)	93, 155, 258, 1452, 1629
Msp20I	TGGCCA	1 cut(s)	1655
MspA1I	CMGCKG	1 cut(s)	1715
MspI	CCGG	4 cut(s)	282, 349, 603, 828
MspR9I	CCNGG	7 cut(s)	174, 330, 603, 801, 829, 1260, 1602
Mva1269I	GAATGC	1 cut(s)	264
MvaI	CCWGG	5 cut(s)	174, 330, 801, 1260, 1602
MvnI	CGCG	2 cut(s)	1177, 1553
MwoI	GCNNNNNNNGC	6 cut(s)	56, 866, 887, 1000, 1053, 1170
NciI	CCSGG	2 cut(s)	603, 829
NcoI	CCATGG	1 cut(s)	1656
NdeII	GATC	5 cut(s)	76, 138, 607, 1145, 1528
NheI	GCTAGC	1 cut(s)	1187
NlaIII	CATG	6 cut(s)	98, 263, 405, 793, 1195, 1660
NlaIV	GGNNCC	5 cut(s)	298, 634, 833, 1165, 1557
NmuCI	GTSAC	4 cut(s)	220, 244, 1417, 1622
NsiI	ATGCAT	1 cut(s)	1620
PaqCI	CACCTGC	1 cut(s)	1381
PceI	AGGCCT	1 cut(s)	33
PcsI	WCGNNNNNNNCGW	2 cut(s)	62, 1557
PctI	GAATGC	1 cut(s)	264
PdmI	GAANNNNTTC	1 cut(s)	1097
PfeI	GAWTC	1 cut(s)	478
PflMI	CCANNNNNTGG	1 cut(s)	255
PfoI	TCCNGGA	1 cut(s)	1258
PinAI	ACCGGT	1 cut(s)	348
PkrI	GCNGC	7 cut(s)	562, 691, 862, 892, 1002, 1328, 1692
PleI	GAGTC	4 cut(s)	449, 541, 647, 1113
PpsI	GAGTC	4 cut(s)	449, 541, 647, 1113
Psp6I	CCWGG	5 cut(s)	172, 328, 799, 1258, 1600
PspEI	GGTNACC	1 cut(s)	518
PspGI	CCWGG	5 cut(s)	172, 328, 799, 1258, 1600
PspN4I	GGNNCC	5 cut(s)	298, 634, 833, 1165, 1557
PspOMI	GGGCCC	1 cut(s)	296
PspPI	GGNCC	6 cut(s)	176, 296, 297, 797, 832, 1163
PsuI	RGATCY	2 cut(s)	138, 607
RsaI	GTAC	3 cut(s)	376, 761, 1376
RsaNI	GTAC	3 cut(s)	375, 760, 1375
RseI	CAYNNNNRTG	5 cut(s)	93, 155, 258, 1452, 1629
SalI	GTCGAC	1 cut(s)	64
SaqAI	TTAA	4 cut(s)	591, 821, 981, 1518
SatI	GCNGC	7 cut(s)	561, 690, 861, 891, 1001, 1327, 1691
Sau3AI	GATC	5 cut(s)	76, 138, 607, 1145, 1528
Sau96I	GGNCC	6 cut(s)	176, 296, 297, 797, 832, 1163
SchI	GAGTC	4 cut(s)	449, 541, 647, 1113
ScrFI	CCNGG	7 cut(s)	174, 330, 603, 801, 829, 1260, 1602
SduI	GDGCHC	4 cut(s)	300, 430, 883, 1560
SfaNI	GCATC	4 cut(s)	742, 1037, 1145, 1605
SinI	GGWCC	2 cut(s)	176, 832
SmiMI	CAYNNNNRTG	5 cut(s)	93, 155, 258, 1452, 1629
SpeI	ACTAGT	1 cut(s)	1271
Sse9I	AATT	4 cut(s)	98, 978, 1230, 1486
SseBI	AGGCCT	1 cut(s)	33
SsiI	CCGC	8 cut(s)	290, 690, 860, 1292, 1327, 1553, 1709, 1715
SspMI	CTAG	7 cut(s)	29, 794, 1059, 1149, 1188, 1272, 1383
StuI	AGGCCT	1 cut(s)	33
StyD4I	CCNGG	7 cut(s)	172, 328, 601, 799, 827, 1258, 1600
StyI	CCWWGG	5 cut(s)	69, 183, 361, 1159, 1656
TaiI	ACGT	1 cut(s)	534
TaqI	TCGA	6 cut(s)	65, 235, 847, 1068, 1086, 1144
TaqII	GACCGA	1 cut(s)	1100
TasI	AATT	4 cut(s)	98, 978, 1230, 1486
TauI	GCSGC	3 cut(s)	692, 863, 1329
TfiI	GAWTC	1 cut(s)	478
Tru1I	TTAA	4 cut(s)	591, 821, 981, 1518
Tru9I	TTAA	4 cut(s)	591, 821, 981, 1518
TscAI	CASTG	6 cut(s)	126, 162, 260, 883, 1030, 1189
TseFI	GTSAC	4 cut(s)	220, 244, 1417, 1622
TseI	GCWGC	4 cut(s)	560, 890, 1000, 1690
Tsp45I	GTSAC	4 cut(s)	220, 244, 1417, 1622
TspDTI	ATGAA	6 cut(s)	42, 111, 428, 1208, 1430, 1625
TspGWI	ACGGA	3 cut(s)	706, 925, 1312
TspRI	CASTG	6 cut(s)	126, 162, 260, 883, 1030, 1189
Van91I	CCANNNNNTGG	1 cut(s)	255
VneI	GTGCAC	1 cut(s)	879
VpaK11BI	GGWCC	2 cut(s)	176, 832
XagI	CCTNNNNNAGG	1 cut(s)	1472
XapI	RAATTY	2 cut(s)	98, 1486
XbaI	TCTAGA	1 cut(s)	1148
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1166, 1663
XmiI	GTMKAC	1 cut(s)	65
XmnI	GAANNNNTTC	1 cut(s)	1097
XspI	CTAG	7 cut(s)	29, 794, 1059, 1149, 1188, 1272, 1383
Zsp2I	ATGCAT	1 cut(s)	1620

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.