Rw7G019010

serine threonine-protein kinase cdc7

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0002088
Physical Location & Seq
Forward (+)
20783139 .. 20789204
6066 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G019010.1

Sequence Viewer

Length: 2820 bp
ATGGCAACTAACCCACTCGACTCAGCCCTCACCGCCTCAACCATCTCCGACTCCGACAAGGCTTGGCACCTCCTCGCCCTCCTCTTATCTCTCGGCCGCCGCACCCCGCCCTCTGAGCTCGCCGCCCGATGCACGGCGTTCCCCGCAACTACTCATTCGGTCCGACGCCTTTGCTCCGTCGCCAATTCGCCGCTCTCCTTGTCCGACGATCTATACGTCATGCCGTCTCTACTCGCCGTAACCGCTCTGGCTGAGTCCGTTTCATGTTCCGGCGCCGCCGGCGGTGCACTGAGAACCTACTCAGGGAAGAGGAAGCGCGTCGTTGTGGATTGCGGATTTGTGCCCTCGGCCAAACGGAGATTGATTGTGGATTTTGAAAATGTATATGAAGAGAAAGGAGCGCGGAAATCAGTCGTAATTTCTCCTCCAAAGATACATTTTCATATGACTGACTACCTCAGCAGAAAAATAAATATGCTACCAAGTGATGTGGCTGTGGGGTTGAATAAACGATGTTCAAATCTATCACAGCCATTTGCTGCTGTTTCTGATAAGCAGCCTGCAACCGGCTCCAGAAGCTTAAAAGAGCAGGATTTTGAAGATACAACACCATTGCATAAAGAGCGACATGAGAACCAAACCATTTGTGTGGCCACTGATCTCTCCTCTCCTAAGGTGTCCAATGATTTAGTACAATATGACGGAGCTGACATGCATGAGATAGATATCCAGGGAAACTCTTACCAAGAGAAAATCAAAGAAAGCATAATGCCAGCTTTGGATGAGAGTGTTAGTGGTAACTGTAAAGGTACAAATGCTACAATCCTTGAAGATAAACGAATTGTGGGAGATGCAGAGGAAGGATTGTTAGTAAATCCTGGCAACCCTATTGGAGAAACAGAAATTCTATACCAGCCATATACTAATGTTTCTGATAAGCTGGCTGGAATTGACTTCAGAAGATTGAATGAGGATGACTATGAAGATACAACACCTGTGAATAAAAGTCTTATGACAAGAAATGAGACCCAAACCACCTGTCCTGCTACTGAATTCTATGTTCCTCAAAAGCAGTTGTTGAAGTCCTCTGCAACAATGAAGGCCATGGACAAGGATAAAATATCTTCAAGATTGCAATCTCTATATAGTTGTAGTCTAGAGCAAGATCAGACTGTTGCCACTCCCAAAGTGAACCTCCACCATAAAATGGATCAGAAGACAAATAGCATGGTACACAAATCAAAGCAGAATTGTGGTGACATGCATATTAATGAAAAAAAGAGACGATACAAATCTATTTCCTCTAAGGATCAGCCAGAGAAAAAAGAACTTCCAAATTTTGATTCTTATATGGTAGAAGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACAGGGCGAGGAGTAAGAATGACAGGACAAGGGTTGCCATTAAGTGTCCACATGCTAATGCTCATAAGAGCCATGTTAACAATGAGTTGAGAATGCTGGAAAGGTTTGGGGGGAAGAACTTTGTGATCAAATATGAAGGCTGTATCAAGAATGGAAATTCAAGTTGCTTTGTATTACAGCATGTTGAGCATGATAGGCCTGAGGTTTTAAAGAAAGAGATAGATGTTTGTGAGCTCCGGTGGTATGGATATTGCTTGTTTAGAGCACTTGCAAGCCTTCATAAGCAGGGAATCGTACATAGAGATGTTAAACCCGGCAATTTCCTTTTCTCTCGTAAGGCCAACAAGGGTTACCTTATTGATTTCAATCTATCCATGGACTTGCATCAGAAGTATGGAAATAATAGTAAGTCAAGAGGGGGATTTGATGTAAGCAGCAATGATGAGAAGCTTATGACTGCAAAAAATTTACCTCCAATCACACTTAGGAAGTTGCCAAGTGGTAAATCTTTACTAACAGCCAATGGAGAGACCTCAAAAGGTTTGAAATCCACTTTTGATATGAAGGATCTGAAAAAGATGGCTTTCAGCCAAATGAAGGCCAATAATGATTCGGGTAGTAGGAAGGTAATCAAAAGTCAGTGTGCAGATGGCTCAGGCATAACGTCAGTAAAGGATGTTACAAGTACCAGAACTCCTTCGGCAGAAAGGATGAGAGAACCTTTGCCATGTCAAGGAAGGAAAGAACTGATCAGCCTAGTACAGGAAGCAAGGGAGAGTCCAAATCATGAGGCATCAAGTATTTCAGCTCTTATGAGAAAGAGGGTTCCTGCCCCTCCCGTAAATGTTGATGGCAAGCTTTTCCATGTCACTCCGATGCCTATGCACTCAGCTACCAGTGGTATTGGTGGTCCATGCTTGATAAGAAGCAGAGGTCTTGGAAAACATAAAGAAGGCCCTTGTGCTGGAACAAAAGGCTTCAGGGCTCCAGAGGTTCTCTTCAGATCTCCACATCAAGGCCCCAAAATTGATATCTGGTCTGCTGGAGTCACGCTACTCTACTTGTTGATTGGCAGAACACCCTTCCTTGGTGAACCTGAACTGAACATCAAGGATATAGCAAAGCTGAGAGGCAGTGAAGATTTATGGGAAGTTGCCAAGCTACACGACCGTGAATCCTCATTTCCAGTGGAGCTCTATAGTACAGATTGTTTGCCCTCTATTAAACTAAAGGAGTGGTGTAAAATGAACACAAAGAGACCGGACTTCTTTGAGCAAATCCCAAGACCCCTTTTCGACCTTGTGGACAAATGCTTGATTGTGAACCCTAGGGTTAGATTGAGTGCAGAGGAAGCGCTTAAACATGAGTTTTTCGCTCCATGCCATGAAGAACTGAGAAAGCACAGGCTTCAAAGGCAGGTATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000082 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006909 GO:0006950 GO:0006974 GO:0007049 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0008360 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010389 GO:0010556 GO:0010557 GO:0010564 GO:0010571 GO:0010604 GO:0010948 GO:0010971 GO:0015630 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022603 GO:0022604 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0033262 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0044843 GO:0045171 GO:0045740 GO:0045786 GO:0045787 GO:0045931 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070316 GO:0070317 GO:0071704 GO:0072686 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0098657 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902749 GO:1902751 GO:1903047 GO:2000105 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
Pkinase

Protein Analysis

939

Amino Acids

104.72

Weight (kDa)

9.01

Isoelectric Point (pI)

46.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 451 - 596 4.7e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 454 - 599 1.1e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 786 - 922 3.7e-16 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2800
AccB1I GGYRCC 2 cut(s) 66, 272
AccB7I CCANNNNNTGG 1 cut(s) 1207
AccBSI CCGCTC 2 cut(s) 193, 245
AccII CGCG 2 cut(s) 318, 403
AclWI GGATC 3 cut(s) 1218, 1317, 1968
AcoI YGGCCR 3 cut(s) 94, 348, 651
AcsI RAATTY 5 cut(s) 903, 1052, 1336, 1549, 1858
AcuI CTGAAG 3 cut(s) 940, 2356, 2377
AcyI GRCGYC 2 cut(s) 166, 273
AfaI GTAC 7 cut(s) 693, 811, 1233, 1689, 2080, 2154, 2596
AfeI AGCGCT 1 cut(s) 2748
AjnI CCWGG 2 cut(s) 729, 877
AjuI GAANNNNNNNTTGG 2 cut(s) 1327, 1359
AleI CACNNNNGTG 1 cut(s) 2562
Alw21I GWGCWC 5 cut(s) 120, 289, 1629, 1660, 2589
Alw26I GTCTC 5 cut(s) 231, 1019, 1276, 1916, 2644
Alw44I GTGCAC 1 cut(s) 285
AlwI GGATC 3 cut(s) 1218, 1317, 1968
Aor51HI AGCGCT 1 cut(s) 2748
AoxI GGCC 9 cut(s) 94, 348, 651, 1101, 1589, 1731, 1992, 2347, 2410
ApaLI GTGCAC 1 cut(s) 285
ApeKI GCWGC 3 cut(s) 539, 556, 1827
ApoI RAATTY 5 cut(s) 903, 1052, 1336, 1549, 1858
ArsI GACNNNNNNTTYG 2 cut(s) 1024, 1056
AseI ATTAAT 1 cut(s) 1269
Asp700I GAANNNNTTC 1 cut(s) 2089
AspA2I CCTAGG 1 cut(s) 2720
AspLEI GCGC 4 cut(s) 275, 318, 403, 2749
AspS9I GGNCC 4 cut(s) 160, 2303, 2348, 2411
AsuC2I CCSGG 1 cut(s) 1707
AsuHPI GGTGA 3 cut(s) 22, 1268, 2495
AvaII GGWCC 2 cut(s) 160, 2303
AvrII CCTAGG 1 cut(s) 2720
AxyI CCTNAGG 2 cut(s) 672, 1593
BaeGI GKGCMC 2 cut(s) 289, 345
BalI TGGCCA 1 cut(s) 653
BanI GGYRCC 2 cut(s) 66, 272
BanII GRGCYC 4 cut(s) 120, 1629, 2380, 2589
BbsI GAAGAC 1 cut(s) 1223
Bbv12I GWGCWC 5 cut(s) 120, 289, 1629, 1660, 2589
BbvCI CCTCAGC 1 cut(s) 458
BbvI GCAGC 3 cut(s) 526, 568, 1839
BccI CCATC 4 cut(s) 50, 1966, 2036, 2237
BceAI ACGGC 3 cut(s) 150, 208, 221
BcgI CGANNNNNNTGC 4 cut(s) 153, 187, 2257, 2291
BciT130I CCWGG 2 cut(s) 731, 879
BclI TGATCA 2 cut(s) 1518, 2142
BcnI CCSGG 1 cut(s) 1707
BcoDI GTCTC 5 cut(s) 231, 1019, 1276, 1916, 2644
BfaI CTAG 3 cut(s) 1157, 2150, 2721
BfmI CTRYAG 1 cut(s) 2590
BfoI RGCGCY 2 cut(s) 276, 2750
BfuAI ACCTGC 1 cut(s) 2800
BglII AGATCT 1 cut(s) 2396
BisI GCNGC 8 cut(s) 97, 100, 123, 191, 276, 540, 557, 1828
BlnI CCTAGG 1 cut(s) 2720
BlsI GCNGC 8 cut(s) 98, 101, 124, 192, 277, 541, 558, 1829
Bme1390I CCNGG 3 cut(s) 731, 879, 1707
Bme18I GGWCC 2 cut(s) 160, 2303
BmgT120I GGNCC 4 cut(s) 160, 2303, 2348, 2411
BmiI GGNNCC 6 cut(s) 68, 274, 571, 2220, 2379, 2413
BmrFI CCNGG 3 cut(s) 731, 879, 1707
BmsI GCATC 5 cut(s) 119, 841, 1786, 2195, 2259
BpiI GAAGAC 1 cut(s) 1223
BpmI CTGGAG 3 cut(s) 556, 2364, 2457
Bpu10I CCTNAGC 2 cut(s) 458, 2047
BpuMI CCSGG 1 cut(s) 1707
BsaBI GATNNNNATC 4 cut(s) 725, 1135, 1291, 1758
BsaHI GRCGYC 2 cut(s) 166, 273
BsaI GGTCTC 3 cut(s) 1019, 1916, 2644
BsaJI CCNNGG 6 cut(s) 345, 730, 1104, 1767, 2479, 2720
BsaWI WCCGGW 2 cut(s) 1629, 2653
BsaXI ACNNNNNCTCC 2 cut(s) 2071, 2101
Bse118I RCCGGY 2 cut(s) 278, 566
Bse1I ACTGG 2 cut(s) 2289, 2579
Bse21I CCTNAGG 2 cut(s) 672, 1593
Bse3DI GCAATG 2 cut(s) 611, 1837
Bse8I GATNNNNATC 4 cut(s) 725, 1135, 1291, 1758
BseBI CCWGG 2 cut(s) 731, 879
BseDI CCNNGG 6 cut(s) 345, 730, 1104, 1767, 2479, 2720
BseGI GGATG 4 cut(s) 787, 979, 2074, 2109
BseJI GATNNNNATC 4 cut(s) 725, 1135, 1291, 1758
BseMI GCAATG 2 cut(s) 611, 1837
BseNI ACTGG 2 cut(s) 2289, 2579
BseRI GAGGAG 5 cut(s) 62, 71, 414, 655, 1417
BseSI GKGCMC 2 cut(s) 289, 345
BseX3I CGGCCG 1 cut(s) 94
BseXI GCAGC 3 cut(s) 526, 568, 1839
BsgI GTGCAG 2 cut(s) 2058, 2757
Bsh1236I CGCG 2 cut(s) 318, 403
Bsh1285I CGRYCG 2 cut(s) 97, 2563
BshFI GGCC 9 cut(s) 96, 350, 653, 1103, 1591, 1733, 1994, 2349, 2412
BshNI GGYRCC 2 cut(s) 66, 272
BsiEI CGRYCG 2 cut(s) 97, 2563
BsiHKAI GWGCWC 5 cut(s) 120, 289, 1629, 1660, 2589
BsiSI CCGG 6 cut(s) 270, 279, 567, 1630, 1707, 2654
BsmAI GTCTC 5 cut(s) 231, 1019, 1276, 1916, 2644
BsmBI CGTCTC 2 cut(s) 231, 1276
BsmI GAATGC 1 cut(s) 1491
BsnI GGCC 9 cut(s) 96, 350, 653, 1103, 1591, 1733, 1994, 2349, 2412
Bso31I GGTCTC 3 cut(s) 1019, 1916, 2644
Bsp1286I GDGCHC 7 cut(s) 120, 289, 345, 1629, 1660, 2380, 2589
Bsp143I GATC 9 cut(s) 208, 658, 1165, 1210, 1309, 1518, 1960, 2142, 2396
Bsp19I CCATGG 2 cut(s) 1104, 1767
BspANI GGCC 9 cut(s) 96, 350, 653, 1103, 1591, 1733, 1994, 2349, 2412
BspFNI CGCG 2 cut(s) 318, 403
BspHI TCATGA 1 cut(s) 2179
BspLI GGNNCC 6 cut(s) 68, 274, 571, 2220, 2379, 2413
BspMI ACCTGC 1 cut(s) 2800
BspPI GGATC 3 cut(s) 1218, 1317, 1968
BspT107I GGYRCC 2 cut(s) 66, 272
BspTNI GGTCTC 3 cut(s) 1019, 1916, 2644
BsrBI CCGCTC 2 cut(s) 193, 245
BsrDI GCAATG 2 cut(s) 611, 1837
BsrFI RCCGGY 2 cut(s) 278, 566
BsrI ACTGG 2 cut(s) 2289, 2579
BssAI RCCGGY 2 cut(s) 278, 566
BssECI CCNNGG 6 cut(s) 345, 730, 1104, 1767, 2479, 2720
BssMI GATC 9 cut(s) 208, 658, 1165, 1210, 1309, 1518, 1960, 2142, 2396
BssNI GRCGYC 2 cut(s) 166, 273
BssT1I CCWWGG 4 cut(s) 1104, 1767, 2479, 2720
Bst2UI CCWGG 2 cut(s) 731, 879
Bst4CI ACNGT 4 cut(s) 803, 1174, 1390, 2564
Bst6I CTCTTC 3 cut(s) 302, 384, 2396
BstACI GRCGYC 2 cut(s) 166, 273
BstC8I GCNNGC 7 cut(s) 120, 280, 561, 774, 942, 1666, 2249
BstDSI CCRYGG 2 cut(s) 1104, 1767
BstEII GGTNACC 1 cut(s) 1742
BstENI CCTNNNNNAGG 1 cut(s) 2153
BstF5I GGATG 4 cut(s) 787, 979, 2074, 2109
BstFNI CGCG 2 cut(s) 318, 403
BstH2I RGCGCY 2 cut(s) 276, 2750
BstHHI GCGC 4 cut(s) 275, 318, 403, 2749
BstKTI GATC 9 cut(s) 211, 661, 1168, 1213, 1312, 1521, 1963, 2145, 2399
BstMAI GTCTC 5 cut(s) 231, 1019, 1276, 1916, 2644
BstMBI GATC 9 cut(s) 208, 658, 1165, 1210, 1309, 1518, 1960, 2142, 2396
BstMCI CGRYCG 2 cut(s) 97, 2563
BstNI CCWGG 2 cut(s) 731, 879
BstNSI RCATGY 4 cut(s) 715, 1264, 1448, 1577
BstPI GGTNACC 1 cut(s) 1742
BstSCI CCNGG 3 cut(s) 729, 877, 1705
BstSFI CTRYAG 1 cut(s) 2590
BstSLI GKGCMC 2 cut(s) 289, 345
BstUI CGCG 2 cut(s) 318, 403
BstV1I GCAGC 3 cut(s) 526, 568, 1839
BstV2I GAAGAC 1 cut(s) 1223
BstX2I RGATCY 2 cut(s) 1960, 2396
BstXI CCANNNNNNTGG 1 cut(s) 649
BstYI RGATCY 2 cut(s) 1960, 2396
BstZI CGGCCG 1 cut(s) 94
Bsu36I CCTNAGG 2 cut(s) 672, 1593
BsuRI GGCC 9 cut(s) 96, 350, 653, 1103, 1591, 1733, 1994, 2349, 2412
BtgI CCRYGG 2 cut(s) 1104, 1767
BtsCI GGATG 4 cut(s) 787, 979, 2074, 2109
BtsI GCAGTG 1 cut(s) 2533
BtsIMutI CAGTG 7 cut(s) 287, 654, 1386, 2039, 2296, 2533, 2586
BveI ACCTGC 1 cut(s) 2800
Cac8I GCNNGC 7 cut(s) 120, 280, 561, 774, 942, 1666, 2249
CciI TCATGA 1 cut(s) 2179
CfoI GCGC 4 cut(s) 275, 318, 403, 2749
Cfr10I RCCGGY 2 cut(s) 278, 566
Cfr13I GGNCC 4 cut(s) 160, 2303, 2348, 2411
CpoI CGGWCCG 1 cut(s) 160
CseI GACGC 2 cut(s) 174, 307
Csp6I GTAC 7 cut(s) 692, 810, 1232, 1688, 2079, 2153, 2595
CspCI CAANNNNNGTGG 2 cut(s) 471, 506
CspI CGGWCCG 1 cut(s) 160
CviQI GTAC 7 cut(s) 692, 810, 1232, 1688, 2079, 2153, 2595
DinI GGCGCC 1 cut(s) 274
DpnI GATC 9 cut(s) 210, 660, 1167, 1212, 1311, 1520, 1962, 2144, 2398
DpnII GATC 9 cut(s) 208, 658, 1165, 1210, 1309, 1518, 1960, 2142, 2396
DraI TTTAAA 1 cut(s) 1602
EaeI YGGCCR 3 cut(s) 94, 348, 651
EagI CGGCCG 1 cut(s) 94
Eam1104I CTCTTC 3 cut(s) 302, 384, 2396
EarI CTCTTC 3 cut(s) 302, 384, 2396
Ecl136II GAGCTC 3 cut(s) 118, 1627, 2587
EclXI CGGCCG 1 cut(s) 94
Eco130I CCWWGG 4 cut(s) 1104, 1767, 2479, 2720
Eco147I AGGCCT 1 cut(s) 1591
Eco24I GRGCYC 4 cut(s) 120, 1629, 2380, 2589
Eco31I GGTCTC 3 cut(s) 1019, 1916, 2644
Eco32I GATATC 2 cut(s) 727, 2425
Eco47I GGWCC 2 cut(s) 160, 2303
Eco47III AGCGCT 1 cut(s) 2748
Eco52I CGGCCG 1 cut(s) 94
Eco53kI GAGCTC 3 cut(s) 118, 1627, 2587
Eco57I CTGAAG 3 cut(s) 940, 2356, 2377
Eco81I CCTNAGG 2 cut(s) 672, 1593
Eco91I GGTNACC 1 cut(s) 1742
EcoICRI GAGCTC 3 cut(s) 118, 1627, 2587
EcoNI CCTNNNNNAGG 1 cut(s) 2153
EcoO109I RGGNCCY 2 cut(s) 2348, 2411
EcoO65I GGTNACC 1 cut(s) 1742
EcoRI GAATTC 1 cut(s) 1052
EcoRII CCWGG 2 cut(s) 729, 877
EcoRV GATATC 2 cut(s) 727, 2425
EcoT14I CCWWGG 4 cut(s) 1104, 1767, 2479, 2720
EcoT22I ATGCAT 2 cut(s) 717, 1266
EcoT38I GRGCYC 4 cut(s) 120, 1629, 2380, 2589
EgeI GGCGCC 1 cut(s) 274
EheI GGCGCC 1 cut(s) 274
ErhI CCWWGG 4 cut(s) 1104, 1767, 2479, 2720
Esp3I CGTCTC 2 cut(s) 231, 1276
FauI CCCGC 2 cut(s) 114, 151
FauNDI CATATG 1 cut(s) 444
FbaI TGATCA 2 cut(s) 1518, 2142
Fnu4HI GCNGC 8 cut(s) 97, 100, 123, 191, 276, 540, 557, 1828
FokI GGATG 4 cut(s) 794, 986, 2081, 2116
FriOI GRGCYC 4 cut(s) 120, 1629, 2380, 2589
Fsp4HI GCNGC 8 cut(s) 97, 100, 123, 191, 276, 540, 557, 1828
FspBI CTAG 3 cut(s) 1157, 2150, 2721
GlaI GCGC 4 cut(s) 274, 317, 402, 2748
GluI GCNGC 8 cut(s) 97, 100, 123, 191, 276, 540, 557, 1828
GsuI CTGGAG 3 cut(s) 556, 2364, 2457
HaeII RGCGCY 2 cut(s) 276, 2750
HaeIII GGCC 9 cut(s) 96, 350, 653, 1103, 1591, 1733, 1994, 2349, 2412
HapII CCGG 6 cut(s) 270, 279, 567, 1630, 1707, 2654
HgaI GACGC 2 cut(s) 174, 307
HhaI GCGC 4 cut(s) 275, 318, 403, 2749
Hin1I GRCGYC 2 cut(s) 166, 273
Hin6I GCGC 4 cut(s) 273, 316, 401, 2747
HinP1I GCGC 4 cut(s) 273, 316, 401, 2747
HincII GTYRAC 1 cut(s) 1471
HindII GTYRAC 1 cut(s) 1471
HindIII AAGCTT 3 cut(s) 577, 1841, 2249
HinfI GANTC 9 cut(s) 20, 50, 254, 1343, 1683, 2003, 2170, 2439, 2567
HpaI GTTAAC 1 cut(s) 1471
HpaII CCGG 6 cut(s) 270, 279, 567, 1630, 1707, 2654
HphI GGTGA 3 cut(s) 22, 1268, 2495
Hpy166II GTNNAC 9 cut(s) 287, 1192, 1234, 1393, 1442, 1471, 2486, 2698, 2716
Hpy188III TCNNGA 7 cut(s) 573, 1128, 1157, 1540, 1806, 2180, 2381
Hpy8I GTNNAC 9 cut(s) 287, 1192, 1234, 1393, 1442, 1471, 2486, 2698, 2716
Hpy99I CGWCG 4 cut(s) 168, 182, 209, 323
HpyCH4III ACNGT 4 cut(s) 803, 1174, 1390, 2564
HpyCH4IV ACGT 2 cut(s) 216, 2057
HpySE526I ACGT 2 cut(s) 216, 2057
Hsp92I GRCGYC 2 cut(s) 166, 273
HspAI GCGC 4 cut(s) 273, 316, 401, 2747
KasI GGCGCC 1 cut(s) 272
KroI GCCGGC 1 cut(s) 278
KroNI GCCGGC 1 cut(s) 280
Ksp22I TGATCA 2 cut(s) 1518, 2142
KspAI GTTAAC 1 cut(s) 1471
Kzo9I GATC 9 cut(s) 208, 658, 1165, 1210, 1309, 1518, 1960, 2142, 2396
LmnI GCTCC 8 cut(s) 179, 398, 575, 704, 1632, 2383, 2584, 2773
Lsp1109I GCAGC 3 cut(s) 526, 568, 1839
LweI GCATC 5 cut(s) 119, 841, 1786, 2195, 2259
MaeI CTAG 3 cut(s) 1157, 2150, 2721
MaeII ACGT 2 cut(s) 216, 2057
MaeIII GTNAC 7 cut(s) 238, 797, 1256, 1742, 2071, 2260, 2440
MalI GATC 9 cut(s) 210, 660, 1167, 1212, 1311, 1520, 1962, 2144, 2398
MbiI CCGCTC 2 cut(s) 193, 245
MboI GATC 9 cut(s) 208, 658, 1165, 1210, 1309, 1518, 1960, 2142, 2396
MflI RGATCY 2 cut(s) 1960, 2396
MhlI GDGCHC 7 cut(s) 120, 289, 345, 1629, 1660, 2380, 2589
MlsI TGGCCA 1 cut(s) 653
MluNI TGGCCA 1 cut(s) 653
Mly113I GGCGCC 1 cut(s) 273
MlyI GAGTC 5 cut(s) 14, 44, 263, 2179, 2448
MmeI TCCRAC 4 cut(s) 72, 78, 187, 228
Mox20I TGGCCA 1 cut(s) 653
Mph1103I ATGCAT 2 cut(s) 717, 1266
MreI CGCCGGCG 1 cut(s) 278
MroNI GCCGGC 1 cut(s) 278
MroXI GAANNNNTTC 1 cut(s) 2089
MscI TGGCCA 1 cut(s) 653
MseI TTAA 8 cut(s) 581, 1269, 1434, 1470, 1601, 1701, 2616, 2751
MslI CAYNNNNRTG 6 cut(s) 647, 1269, 1449, 1695, 2267, 2562
Msp20I TGGCCA 1 cut(s) 653
MspI CCGG 6 cut(s) 270, 279, 567, 1630, 1707, 2654
MspR9I CCNGG 3 cut(s) 731, 879, 1707
Mva1269I GAATGC 1 cut(s) 1491
MvaI CCWGG 2 cut(s) 731, 879
MvnI CGCG 2 cut(s) 318, 403
NaeI GCCGGC 1 cut(s) 280
NarI GGCGCC 1 cut(s) 273
NciI CCSGG 1 cut(s) 1707
NcoI CCATGG 2 cut(s) 1104, 1767
NdeI CATATG 1 cut(s) 444
NdeII GATC 9 cut(s) 208, 658, 1165, 1210, 1309, 1518, 1960, 2142, 2396
NgoMIV GCCGGC 1 cut(s) 278
NlaIV GGNNCC 6 cut(s) 68, 274, 571, 2220, 2379, 2413
NmeAIII GCCGAG 2 cut(s) 72, 326
NmuCI GTSAC 3 cut(s) 1256, 2260, 2440
NsiI ATGCAT 2 cut(s) 717, 1266
NspI RCATGY 4 cut(s) 715, 1264, 1448, 1577
OliI CACNNNNGTG 1 cut(s) 2562
PagI TCATGA 1 cut(s) 2179
PceI AGGCCT 1 cut(s) 1591
PcsI WCGNNNNNNNCGW 1 cut(s) 213
PctI GAATGC 1 cut(s) 1491
PdiI GCCGGC 1 cut(s) 280
PdmI GAANNNNTTC 1 cut(s) 2089
PfeI GAWTC 4 cut(s) 1343, 1683, 2003, 2567
PflMI CCANNNNNTGG 1 cut(s) 1207
PkrI GCNGC 8 cut(s) 98, 101, 124, 192, 277, 541, 558, 1829
PleI GAGTC 5 cut(s) 14, 44, 262, 2178, 2447
PluTI GGCGCC 1 cut(s) 276
PpsI GAGTC 5 cut(s) 14, 44, 262, 2178, 2447
PshBI ATTAAT 1 cut(s) 1269
Psp124BI GAGCTC 3 cut(s) 120, 1629, 2589
Psp6I CCWGG 2 cut(s) 729, 877
PspEI GGTNACC 1 cut(s) 1742
PspGI CCWGG 2 cut(s) 729, 877
PspN4I GGNNCC 6 cut(s) 68, 274, 571, 2220, 2379, 2413
PspPI GGNCC 4 cut(s) 160, 2303, 2348, 2411
PsuI RGATCY 2 cut(s) 1960, 2396
RsaI GTAC 7 cut(s) 693, 811, 1233, 1689, 2080, 2154, 2596
RsaNI GTAC 7 cut(s) 692, 810, 1232, 1688, 2079, 2153, 2595
RseI CAYNNNNRTG 6 cut(s) 647, 1269, 1449, 1695, 2267, 2562
Rsr2I CGGWCCG 1 cut(s) 160
RsrII CGGWCCG 1 cut(s) 160
SacI GAGCTC 3 cut(s) 120, 1629, 2589
SaqAI TTAA 8 cut(s) 581, 1269, 1434, 1470, 1601, 1701, 2616, 2751
SatI GCNGC 8 cut(s) 97, 100, 123, 191, 276, 540, 557, 1828
Sau3AI GATC 9 cut(s) 208, 658, 1165, 1210, 1309, 1518, 1960, 2142, 2396
Sau96I GGNCC 4 cut(s) 160, 2303, 2348, 2411
SchI GAGTC 5 cut(s) 14, 44, 263, 2179, 2448
ScrFI CCNGG 3 cut(s) 731, 879, 1707
SduI GDGCHC 7 cut(s) 120, 289, 345, 1629, 1660, 2380, 2589
SfaNI GCATC 5 cut(s) 119, 841, 1786, 2195, 2259
SfcI CTRYAG 1 cut(s) 2590
SfoI GGCGCC 1 cut(s) 274
SgrAI CRCCGGYG 1 cut(s) 278
SinI GGWCC 2 cut(s) 160, 2303
SmiMI CAYNNNNRTG 6 cut(s) 647, 1269, 1449, 1695, 2267, 2562
SseBI AGGCCT 1 cut(s) 1591
SspDI GGCGCC 1 cut(s) 272
SspMI CTAG 3 cut(s) 1157, 2150, 2721
SstI GAGCTC 3 cut(s) 120, 1629, 2589
StuI AGGCCT 1 cut(s) 1591
StyD4I CCNGG 3 cut(s) 729, 877, 1705
StyI CCWWGG 4 cut(s) 1104, 1767, 2479, 2720
TaaI ACNGT 4 cut(s) 803, 1174, 1390, 2564
TaiI ACGT 2 cut(s) 219, 2060
TaqI TCGA 2 cut(s) 18, 2688
TaqII GACCGA 1 cut(s) 148
TatI WGTACW 3 cut(s) 691, 2152, 2594
TauI GCSGC 5 cut(s) 99, 102, 125, 193, 278
TfiI GAWTC 4 cut(s) 1343, 1683, 2003, 2567
Tru1I TTAA 8 cut(s) 581, 1269, 1434, 1470, 1601, 1701, 2616, 2751
Tru9I TTAA 8 cut(s) 581, 1269, 1434, 1470, 1601, 1701, 2616, 2751
TscAI CASTG 7 cut(s) 294, 661, 1393, 2039, 2296, 2533, 2586
TseFI GTSAC 3 cut(s) 1256, 2260, 2440
TseI GCWGC 3 cut(s) 539, 556, 1827
Tsp45I GTSAC 3 cut(s) 1256, 2260, 2440
TspGWI ACGGA 4 cut(s) 166, 247, 370, 717
TspRI CASTG 7 cut(s) 294, 661, 1393, 2039, 2296, 2533, 2586
Van91I CCANNNNNTGG 1 cut(s) 1207
VneI GTGCAC 1 cut(s) 285
VpaK11BI GGWCC 2 cut(s) 160, 2303
VspI ATTAAT 1 cut(s) 1269
XagI CCTNNNNNAGG 1 cut(s) 2153
XapI RAATTY 5 cut(s) 903, 1052, 1336, 1549, 1858
XbaI TCTAGA 1 cut(s) 1156
XceI RCATGY 4 cut(s) 715, 1264, 1448, 1577
XmaJI CCTAGG 1 cut(s) 2720
XmnI GAANNNNTTC 1 cut(s) 2089
XspI CTAG 3 cut(s) 1157, 2150, 2721
Zsp2I ATGCAT 2 cut(s) 717, 1266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.