FvH4_5g23771

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000465
Physical Location & Seq
Forward (+)
15084287 .. 15085280
994 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g23771.t1

Sequence Viewer

Length: 384 bp
ATGATGATGACCTGGACTTTCGAGATTTTTCAGAAGTTTGAGATTCCGGCGGTCAGCTTTTTCACCTCCGGTGCTTGCTCAGCCGCCATGGAGTATGCCCTGTGGAAGGCCCACCCGTTAGATGTCAAACCGGGCGAGACCCGTTTGTTACCCGGGTTACCCGAAGAGATGGCTGTTACGGTTTCGGATACTAAACGGCAGTCTCGTCGGTCACCATTCTCCATGGGCGGAAGCGGTCCGCCCGGAGGCGGGTCTAGTGGTCCTGGCCGGCGAAGAATGGGTCCGCCAATGCCGGGTGACAAACCACATTGGTTAGAGGTGACGGAGCAGTTTATCGGGGTGTTTCAAAGTTTTAAATCAATCAAAATGATACATGACGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

128

Amino Acids

14.01

Weight (kDa)

8.89

Isoelectric Point (pI)

70.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000465)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48790 AT5G48790 AT5G48790
fragaria_vesca FvH4_5g23760 FvH4_5g23760 FvH4_5g23770 FvH4_5g23771 FvH4_5g23790 FvH4_5g23800 FvH4_7g03421 FvH4_7g07510
malus_domestica MD00G1000600.v1.1 MD06G1013900.v1.1
prunus_persica Prupe.2G101800_v2.0.a1 Prupe.5G022600_v2.0.a1 Prupe.5G022700_v2.0.a1
pyrus_communis pycom07g06280 pycom16g25400
rosa_chinensis RchiOBHm_Chr1g0337881 RchiOBHm_Chr1g0339341 RchiOBHm_Chr7g0213081 RchiOBHm_Chr7g0213111 RchiOBHm_Chr7g0213141 RchiOBHm_Chr7g0213151 RchiOBHm_Chr7g0213161 RchiOBHm_Chr7g0213181
rosa_laevigata RLG00000002825 RLG00000002828 RLG00000002829 RLG00000002832 RLG00000029226
rosa_multiflora Rmu_co8345885.1_g000002 Rmu_co8348513.1_g000001 Rmu_co8456259.1_g000001 Rmu_sc0000613.1_g000002 Rmu_sc0001121.1_g000005 Rmu_sc0001121.1_g000006 Rmu_sc0002989.1_g000003 Rmu_sc0015110.1_g000001 Rmu_sc0030208.1_g000001 Rmu_sc0030209.1_g000001 Rmu_sc0032877.1_g000001 Rmu_sc0039394.1_g000001 Rmu_ssc0000084.1_g000002 Rmu_ssc0000084.1_g000007 Rmu_ssc0000084.1_g000009 Rmu_ssc0000084.1_g000012
rosa_roxburghii Rroxscaffold_3G00246200 Rroxscaffold_3G00246210 Rroxscaffold_3G00246240 Rroxscaffold_3G00246250 Rroxscaffold_4G00313440
rosa_rugosa Rorug01G0142600.1 Rorug07G0139400 Rorug07G0139500 Rorug07G0139600 Rorug07G0139700.1 Rorug07G0139800 Rorug07G0140100
rosa_samantha Rh1AG159300 Rh1BG126400 Rh1CG148500 Rh7AG270700 Rh7AG270800 Rh7AG271200 Rh7AG271400 Rh7AG271500 Rh7BG266400 Rh7BG266600 Rh7BG267000 Rh7BG267100 Rh7BG267200 Rh7BG267400 Rh7CG290000 Rh7CG290100 Rh7CG290600 Rh7CG290700 Rh7CG290800 Rh7DG278900 Rh7DG279200 Rh7DG279300 Rh7DG279400 Rh7DG279500 Rh7DG279600
rosa_wichuraiana Rw1G013550 Rw7G023520 Rw7G023530 Rw7G023540 Rw7G023550 Rw7G023560 Rw7G023580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 7 cut(s) 50, 84, 228, 234, 239, 249, 284
AcoI YGGCCR 1 cut(s) 265
AfiI CCNNNNNNNGG 5 cut(s) 106, 245, 248, 249, 293
AgsI TTSAA 1 cut(s) 347
AjnI CCWGG 2 cut(s) 11, 262
AluBI AGCT 1 cut(s) 57
AluI AGCT 1 cut(s) 57
Alw26I GTCTC 2 cut(s) 131, 207
Ama87I CYCGRG 1 cut(s) 152
AoxI GGCC 2 cut(s) 108, 265
ArsI GACNNNNNNTTYG 2 cut(s) 265, 297
AspS9I GGNCC 4 cut(s) 109, 236, 260, 281
AsuC2I CCSGG 5 cut(s) 132, 153, 154, 243, 294
AsuHPI GGTGA 4 cut(s) 55, 204, 308, 331
AvaI CYCGRG 1 cut(s) 152
AvaII GGWCC 3 cut(s) 236, 260, 281
BccI CCATC 1 cut(s) 163
BceAI ACGGC 1 cut(s) 212
BcgI CGANNNNNNTGC 2 cut(s) 188, 222
BciT130I CCWGG 2 cut(s) 13, 264
BciVI GTATCC 1 cut(s) 181
BcnI CCSGG 5 cut(s) 132, 153, 154, 243, 294
BcoDI GTCTC 2 cut(s) 131, 207
BfaI CTAG 1 cut(s) 255
BfuI GTATCC 1 cut(s) 181
BisI GCNGC 1 cut(s) 84
BlpI GCTNAGC 1 cut(s) 79
BlsI GCNGC 1 cut(s) 85
Bme1390I CCNGG 7 cut(s) 13, 132, 153, 154, 243, 264, 294
Bme18I GGWCC 3 cut(s) 236, 260, 281
BmeT110I CYCGRG 1 cut(s) 152
BmgT120I GGNCC 4 cut(s) 109, 236, 260, 281
BmiI GGNNCC 1 cut(s) 282
BmrFI CCNGG 7 cut(s) 13, 132, 153, 154, 243, 264, 294
Bpu1102I GCTNAGC 1 cut(s) 79
BpuMI CCSGG 5 cut(s) 132, 153, 154, 243, 294
BsaI GGTCTC 1 cut(s) 131
BsaJI CCNNGG 3 cut(s) 87, 152, 222
BsaWI WCCGGW 1 cut(s) 68
Bsc4I CCNNNNNNNGG 5 cut(s) 106, 245, 248, 249, 293
Bse118I RCCGGY 1 cut(s) 267
BseBI CCWGG 2 cut(s) 13, 264
BseDI CCNNGG 3 cut(s) 87, 152, 222
BseLI CCNNNNNNNGG 5 cut(s) 106, 245, 248, 249, 293
BseMII CTCAG 1 cut(s) 93
BshFI GGCC 2 cut(s) 110, 267
BsiHKCI CYCGRG 1 cut(s) 152
BsiSI CCGG 7 cut(s) 47, 69, 131, 153, 243, 268, 293
BslI CCNNNNNNNGG 5 cut(s) 106, 245, 248, 249, 293
BsmAI GTCTC 2 cut(s) 131, 207
BsnI GGCC 2 cut(s) 110, 267
Bso31I GGTCTC 1 cut(s) 131
BsoBI CYCGRG 1 cut(s) 152
Bsp1720I GCTNAGC 1 cut(s) 79
Bsp19I CCATGG 2 cut(s) 87, 222
BspACI CCGC 7 cut(s) 50, 84, 228, 234, 239, 249, 284
BspANI GGCC 2 cut(s) 110, 267
BspCNI CTCAG 1 cut(s) 92
BspLI GGNNCC 1 cut(s) 282
BspTNI GGTCTC 1 cut(s) 131
BsrFI RCCGGY 1 cut(s) 267
BssAI RCCGGY 1 cut(s) 267
BssECI CCNNGG 3 cut(s) 87, 152, 222
BssT1I CCWWGG 2 cut(s) 87, 222
Bst2UI CCWGG 2 cut(s) 13, 264
Bst4CI ACNGT 1 cut(s) 181
Bst6I CTCTTC 1 cut(s) 159
BstC8I GCNNGC 2 cut(s) 76, 269
BstDEI CTNAG 1 cut(s) 79
BstDSI CCRYGG 2 cut(s) 87, 222
BstEII GGTNACC 2 cut(s) 156, 210
BstENI CCTNNNNNAGG 1 cut(s) 104
BstMAI GTCTC 2 cut(s) 131, 207
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNI CCWGG 2 cut(s) 13, 264
BstPI GGTNACC 2 cut(s) 156, 210
BstSCI CCNGG 7 cut(s) 11, 130, 151, 152, 241, 262, 292
BsuI GTATCC 1 cut(s) 181
BsuRI GGCC 2 cut(s) 110, 267
BtgI CCRYGG 2 cut(s) 87, 222
Cac8I GCNNGC 2 cut(s) 76, 269
Cfr10I RCCGGY 1 cut(s) 267
Cfr13I GGNCC 4 cut(s) 109, 236, 260, 281
Cfr9I CCCGGG 1 cut(s) 152
CpoI CGGWCCG 1 cut(s) 236
CspI CGGWCCG 1 cut(s) 236
CviAII CATG 3 cut(s) 88, 223, 374
CviJI RGCY 5 cut(s) 57, 83, 110, 173, 267
CviKI_1 RGCY 5 cut(s) 57, 83, 110, 173, 267
DdeI CTNAG 1 cut(s) 79
DraI TTTAAA 1 cut(s) 355
EaeI YGGCCR 1 cut(s) 265
Eam1104I CTCTTC 1 cut(s) 159
EarI CTCTTC 1 cut(s) 159
EciI GGCGGA 3 cut(s) 228, 243, 273
Eco130I CCWWGG 2 cut(s) 87, 222
Eco31I GGTCTC 1 cut(s) 131
Eco47I GGWCC 3 cut(s) 236, 260, 281
Eco88I CYCGRG 1 cut(s) 152
Eco91I GGTNACC 2 cut(s) 156, 210
EcoNI CCTNNNNNAGG 1 cut(s) 104
EcoO65I GGTNACC 2 cut(s) 156, 210
EcoRII CCWGG 2 cut(s) 11, 262
EcoT14I CCWWGG 2 cut(s) 87, 222
ErhI CCWWGG 2 cut(s) 87, 222
FaeI CATG 3 cut(s) 91, 226, 377
FaiI YATR 4 cut(s) 89, 96, 224, 375
FatI CATG 3 cut(s) 87, 222, 373
FauI CCCGC 1 cut(s) 242
Fnu4HI GCNGC 1 cut(s) 84
Fsp4HI GCNGC 1 cut(s) 84
FspBI CTAG 1 cut(s) 255
GluI GCNGC 1 cut(s) 84
HaeIII GGCC 2 cut(s) 110, 267
HapII CCGG 7 cut(s) 47, 69, 131, 153, 243, 268, 293
Hin1II CATG 3 cut(s) 91, 226, 377
HinfI GANTC 1 cut(s) 43
HpaII CCGG 7 cut(s) 47, 69, 131, 153, 243, 268, 293
HphI GGTGA 4 cut(s) 55, 204, 308, 331
Hpy188I TCNGA 2 cut(s) 33, 187
Hpy188III TCNNGA 1 cut(s) 22
Hpy99I CGWCG 1 cut(s) 210
HpyAV CCTTC 1 cut(s) 100
HpyCH4III ACNGT 1 cut(s) 181
HpyCH4IV ACGT 1 cut(s) 378
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 1 cut(s) 79
HpySE526I ACGT 1 cut(s) 378
Hsp92II CATG 3 cut(s) 91, 226, 377
KroI GCCGGC 1 cut(s) 267
KroNI GCCGGC 1 cut(s) 269
LmnI GCTCC 1 cut(s) 325
MaeI CTAG 1 cut(s) 255
MaeII ACGT 1 cut(s) 378
MaeIII GTNAC 6 cut(s) 147, 156, 175, 210, 296, 319
MboII GAAGA 2 cut(s) 176, 285
MnlI CCTC 3 cut(s) 76, 239, 310
MroNI GCCGGC 1 cut(s) 267
MseI TTAA 2 cut(s) 354, 382
MspI CCGG 7 cut(s) 47, 69, 131, 153, 243, 268, 293
MspR9I CCNGG 7 cut(s) 13, 132, 153, 154, 243, 264, 294
MvaI CCWGG 2 cut(s) 13, 264
MwoI GCNNNNNNNGC 1 cut(s) 80
NaeI GCCGGC 1 cut(s) 269
NciI CCSGG 5 cut(s) 132, 153, 154, 243, 294
NcoI CCATGG 2 cut(s) 87, 222
NgoMIV GCCGGC 1 cut(s) 267
NlaIII CATG 3 cut(s) 91, 226, 377
NlaIV GGNNCC 1 cut(s) 282
NmuCI GTSAC 3 cut(s) 210, 296, 319
PcsI WCGNNNNNNNCGW 1 cut(s) 202
PdiI GCCGGC 1 cut(s) 269
PfeI GAWTC 1 cut(s) 43
PkrI GCNGC 1 cut(s) 85
Psp6I CCWGG 2 cut(s) 11, 262
PspEI GGTNACC 2 cut(s) 156, 210
PspGI CCWGG 2 cut(s) 11, 262
PspN4I GGNNCC 1 cut(s) 282
PspPI GGNCC 4 cut(s) 109, 236, 260, 281
Rsr2I CGGWCCG 1 cut(s) 236
RsrII CGGWCCG 1 cut(s) 236
SaqAI TTAA 2 cut(s) 354, 382
SatI GCNGC 1 cut(s) 84
Sau96I GGNCC 4 cut(s) 109, 236, 260, 281
ScrFI CCNGG 7 cut(s) 13, 132, 153, 154, 243, 264, 294
SetI ASST 5 cut(s) 14, 59, 68, 321, 381
SinI GGWCC 3 cut(s) 236, 260, 281
SmaI CCCGGG 1 cut(s) 154
SsiI CCGC 7 cut(s) 50, 84, 228, 234, 239, 249, 284
SspMI CTAG 1 cut(s) 255
StyD4I CCNGG 7 cut(s) 11, 130, 151, 152, 241, 262, 292
StyI CCWWGG 2 cut(s) 87, 222
TaaI ACNGT 1 cut(s) 181
TaiI ACGT 1 cut(s) 381
TaqI TCGA 1 cut(s) 21
TaqII GACCGA 1 cut(s) 198
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 1 cut(s) 43
Tru1I TTAA 2 cut(s) 354, 382
Tru9I TTAA 2 cut(s) 354, 382
TseFI GTSAC 3 cut(s) 210, 296, 319
Tsp45I GTSAC 3 cut(s) 210, 296, 319
TspGWI ACGGA 1 cut(s) 338
TspMI CCCGGG 1 cut(s) 152
VpaK11BI GGWCC 3 cut(s) 236, 260, 281
XagI CCTNNNNNAGG 1 cut(s) 104
XmaI CCCGGG 1 cut(s) 152
XspI CTAG 1 cut(s) 255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.