Rh7CG290600

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000465
Physical Location & Seq
Reverse (-)
29674738 .. 29675566
829 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG290600.1

Sequence Viewer

Length: 450 bp
ATGGAGCTCTGCAAGCACTTGGCCTCCAAAAACTTCAAAGCCGTTTTTGTTATCTCTTCCGAATTCTCCTCCTCCATACCCTCATCTATCTGCCAATACCCACTAGTCGAAATCGCTGAAATTTCTGAAGCACCACTATCTGATTCGTCTTCTCCACTGCAGGAGCCGACTTCTCAGCCTCTTCACCGCCACCACGCACGCTACAGCCAGATAGCAGTCGGGCTTGACAAACTCCTCCATGATCCGGATTCAGTCCGACGACCCCTTTGTGCCGTTGTTGACATGATGATGAGCTGGACTTGTGAGATTTTTAACAGATACGAAATTCCGGCAGTCAACTTCTTCACCTCCAATGCTTGCTCTGCCGCCATGGACTATGGGCAGAGCAAGCACAAATTTGGAACAAAATCAAAGAGTCATGGCCTAGATATATATAAGGGAAACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

149

Amino Acids

16.6

Weight (kDa)

6.64

Isoelectric Point (pI)

47.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000465)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48790 AT5G48790 AT5G48790
fragaria_vesca FvH4_5g23760 FvH4_5g23760 FvH4_5g23770 FvH4_5g23771 FvH4_5g23790 FvH4_5g23800 FvH4_7g03421 FvH4_7g07510
malus_domestica MD00G1000600.v1.1 MD06G1013900.v1.1
prunus_persica Prupe.2G101800_v2.0.a1 Prupe.5G022600_v2.0.a1 Prupe.5G022700_v2.0.a1
pyrus_communis pycom07g06280 pycom16g25400
rosa_chinensis RchiOBHm_Chr1g0337881 RchiOBHm_Chr1g0339341 RchiOBHm_Chr7g0213081 RchiOBHm_Chr7g0213111 RchiOBHm_Chr7g0213141 RchiOBHm_Chr7g0213151 RchiOBHm_Chr7g0213161 RchiOBHm_Chr7g0213181
rosa_laevigata RLG00000002825 RLG00000002828 RLG00000002829 RLG00000002832 RLG00000029226
rosa_multiflora Rmu_co8345885.1_g000002 Rmu_co8348513.1_g000001 Rmu_co8456259.1_g000001 Rmu_sc0000613.1_g000002 Rmu_sc0001121.1_g000005 Rmu_sc0001121.1_g000006 Rmu_sc0002989.1_g000003 Rmu_sc0015110.1_g000001 Rmu_sc0030208.1_g000001 Rmu_sc0030209.1_g000001 Rmu_sc0032877.1_g000001 Rmu_sc0039394.1_g000001 Rmu_ssc0000084.1_g000002 Rmu_ssc0000084.1_g000007 Rmu_ssc0000084.1_g000009 Rmu_ssc0000084.1_g000012
rosa_roxburghii Rroxscaffold_3G00246200 Rroxscaffold_3G00246210 Rroxscaffold_3G00246240 Rroxscaffold_3G00246250 Rroxscaffold_4G00313440
rosa_rugosa Rorug01G0142600.1 Rorug07G0139400 Rorug07G0139500 Rorug07G0139600 Rorug07G0139700.1 Rorug07G0139800 Rorug07G0140100
rosa_samantha Rh1AG159300 Rh1BG126400 Rh1CG148500 Rh7AG270700 Rh7AG270800 Rh7AG271200 Rh7AG271400 Rh7AG271500 Rh7BG266400 Rh7BG266600 Rh7BG267000 Rh7BG267100 Rh7BG267200 Rh7BG267400 Rh7CG290000 Rh7CG290100 Rh7CG290600 Rh7CG290700 Rh7CG290800 Rh7DG278900 Rh7DG279200 Rh7DG279300 Rh7DG279400 Rh7DG279500 Rh7DG279600
rosa_wichuraiana Rw1G013550 Rw7G023520 Rw7G023530 Rw7G023540 Rw7G023550 Rw7G023560 Rw7G023580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 244
AciI CCGC 2 cut(s) 187, 366
AclWI GGATC 1 cut(s) 236
AcsI RAATTY 4 cut(s) 62, 120, 324, 395
AcuI CTGAAG 1 cut(s) 147
AfiI CCNNNNNNNGG 1 cut(s) 244
AgsI TTSAA 1 cut(s) 37
AhlI ACTAGT 1 cut(s) 103
AluBI AGCT 2 cut(s) 7, 294
AluI AGCT 2 cut(s) 7, 294
Alw21I GWGCWC 1 cut(s) 9
AlwI GGATC 1 cut(s) 236
Aor13HI TCCGGA 1 cut(s) 244
AoxI GGCC 2 cut(s) 21, 421
ApoI RAATTY 4 cut(s) 62, 120, 324, 395
ArsI GACNNNNNNTTYG 2 cut(s) 249, 281
AsuHPI GGTGA 2 cut(s) 176, 337
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 141
Bbv12I GWGCWC 1 cut(s) 9
BceAI ACGGC 2 cut(s) 26, 257
BcuI ACTAGT 1 cut(s) 103
BfaI CTAG 2 cut(s) 104, 425
BfmI CTRYAG 2 cut(s) 158, 202
BisI GCNGC 1 cut(s) 366
BlsI GCNGC 1 cut(s) 367
BmiI GGNNCC 1 cut(s) 165
BpiI GAAGAC 1 cut(s) 141
BsaJI CCNNGG 1 cut(s) 369
BsaWI WCCGGW 1 cut(s) 244
BsaXI ACNNNNNCTCC 2 cut(s) 8, 38
Bsc4I CCNNNNNNNGG 1 cut(s) 244
BseAI TCCGGA 1 cut(s) 244
BseDI CCNNGG 1 cut(s) 369
BseLI CCNNNNNNNGG 1 cut(s) 244
BseMII CTCAG 1 cut(s) 188
BseRI GAGGAG 3 cut(s) 58, 61, 224
BshFI GGCC 2 cut(s) 23, 423
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 2 cut(s) 245, 329
BslI CCNNNNNNNGG 1 cut(s) 244
BsnI GGCC 2 cut(s) 23, 423
Bsp1286I GDGCHC 1 cut(s) 9
Bsp13I TCCGGA 1 cut(s) 244
Bsp143I GATC 1 cut(s) 241
Bsp19I CCATGG 1 cut(s) 369
BspACI CCGC 2 cut(s) 187, 366
BspANI GGCC 2 cut(s) 23, 423
BspCNI CTCAG 1 cut(s) 187
BspEI TCCGGA 1 cut(s) 244
BspLI GGNNCC 1 cut(s) 165
BspMAI CTGCAG 1 cut(s) 162
BspPI GGATC 1 cut(s) 236
BssECI CCNNGG 1 cut(s) 369
BssMI GATC 1 cut(s) 241
BssT1I CCWWGG 1 cut(s) 369
Bst6I CTCTTC 2 cut(s) 61, 186
BstC8I GCNNGC 4 cut(s) 14, 199, 358, 389
BstDEI CTNAG 1 cut(s) 174
BstDSI CCRYGG 1 cut(s) 369
BstKTI GATC 1 cut(s) 244
BstMBI GATC 1 cut(s) 241
BstMWI GCNNNNNNNGC 3 cut(s) 13, 362, 388
BstSFI CTRYAG 2 cut(s) 158, 202
BstV2I GAAGAC 1 cut(s) 141
BsuRI GGCC 2 cut(s) 23, 423
BtgI CCRYGG 1 cut(s) 369
BtsI GCAGTG 1 cut(s) 155
BtsIMutI CAGTG 1 cut(s) 155
Cac8I GCNNGC 4 cut(s) 14, 199, 358, 389
CviAII CATG 4 cut(s) 239, 283, 370, 419
CviJI RGCY 9 cut(s) 7, 23, 41, 166, 178, 207, 223, 294, 423
CviKI_1 RGCY 9 cut(s) 7, 23, 41, 166, 178, 207, 223, 294, 423
DdeI CTNAG 1 cut(s) 174
DpnI GATC 1 cut(s) 243
DpnII GATC 1 cut(s) 241
Eam1104I CTCTTC 2 cut(s) 61, 186
EarI CTCTTC 2 cut(s) 61, 186
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 369
Eco24I GRGCYC 1 cut(s) 9
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 147
EcoICRI GAGCTC 1 cut(s) 7
EcoRI GAATTC 1 cut(s) 62
EcoT14I CCWWGG 1 cut(s) 369
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 369
FaeI CATG 4 cut(s) 242, 286, 373, 422
FaiI YATR 9 cut(s) 77, 240, 284, 371, 378, 420, 431, 433, 435
FatI CATG 4 cut(s) 238, 282, 369, 418
Fnu4HI GCNGC 1 cut(s) 366
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 1 cut(s) 366
FspBI CTAG 2 cut(s) 104, 425
GluI GCNGC 1 cut(s) 366
HaeIII GGCC 2 cut(s) 23, 423
HapII CCGG 2 cut(s) 245, 329
Hin1II CATG 4 cut(s) 242, 286, 373, 422
HincII GTYRAC 2 cut(s) 280, 337
HindII GTYRAC 2 cut(s) 280, 337
HinfI GANTC 3 cut(s) 143, 248, 415
HpaII CCGG 2 cut(s) 245, 329
HphI GGTGA 2 cut(s) 176, 337
Hpy166II GTNNAC 2 cut(s) 280, 337
Hpy188I TCNGA 4 cut(s) 61, 127, 142, 257
Hpy188III TCNNGA 1 cut(s) 245
Hpy8I GTNNAC 2 cut(s) 280, 337
Hpy99I CGWCG 1 cut(s) 261
HpyCH4V TGCA 2 cut(s) 12, 160
HpyF10VI GCNNNNNNNGC 3 cut(s) 13, 362, 388
HpyF3I CTNAG 1 cut(s) 174
Hsp92II CATG 4 cut(s) 242, 286, 373, 422
Kpn2I TCCGGA 1 cut(s) 244
Kzo9I GATC 1 cut(s) 241
LmnI GCTCC 2 cut(s) 4, 163
LpnPI CCDG 5 cut(s) 146, 221, 258, 280, 342
MaeI CTAG 2 cut(s) 104, 425
MalI GATC 1 cut(s) 243
MboI GATC 1 cut(s) 241
MboII GAAGA 4 cut(s) 48, 141, 173, 334
MhlI GDGCHC 1 cut(s) 9
MluCI AATT 5 cut(s) 62, 120, 324, 395, 445
MlyI GAGTC 1 cut(s) 424
MmeI TCCRAC 1 cut(s) 280
MnlI CCTC 7 cut(s) 34, 79, 82, 91, 189, 245, 358
MroI TCCGGA 1 cut(s) 244
MseI TTAA 2 cut(s) 312, 448
MslI CAYNNNNRTG 1 cut(s) 287
MspI CCGG 2 cut(s) 245, 329
MwoI GCNNNNNNNGC 3 cut(s) 13, 362, 388
NcoI CCATGG 1 cut(s) 369
NdeII GATC 1 cut(s) 241
NlaIII CATG 4 cut(s) 242, 286, 373, 422
NlaIV GGNNCC 1 cut(s) 165
PfeI GAWTC 2 cut(s) 143, 248
PkrI GCNGC 1 cut(s) 367
PleI GAGTC 1 cut(s) 423
PpsI GAGTC 1 cut(s) 423
Psp124BI GAGCTC 1 cut(s) 9
PspN4I GGNNCC 1 cut(s) 165
PstI CTGCAG 1 cut(s) 162
RseI CAYNNNNRTG 1 cut(s) 287
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 2 cut(s) 312, 448
SatI GCNGC 1 cut(s) 366
Sau3AI GATC 1 cut(s) 241
SchI GAGTC 1 cut(s) 424
SduI GDGCHC 1 cut(s) 9
SetI ASST 3 cut(s) 9, 296, 350
SfcI CTRYAG 2 cut(s) 158, 202
SmiMI CAYNNNNRTG 1 cut(s) 287
SpeI ACTAGT 1 cut(s) 103
Sse9I AATT 5 cut(s) 62, 120, 324, 395, 445
SsiI CCGC 2 cut(s) 187, 366
SspMI CTAG 2 cut(s) 104, 425
SstI GAGCTC 1 cut(s) 9
StyI CCWWGG 1 cut(s) 369
TaqI TCGA 1 cut(s) 108
TasI AATT 5 cut(s) 62, 120, 324, 395, 445
TauI GCSGC 1 cut(s) 368
TfiI GAWTC 2 cut(s) 143, 248
Tru1I TTAA 2 cut(s) 312, 448
Tru9I TTAA 2 cut(s) 312, 448
TscAI CASTG 1 cut(s) 162
TspRI CASTG 1 cut(s) 162
XapI RAATTY 4 cut(s) 62, 120, 324, 395
XspI CTAG 2 cut(s) 104, 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.