Rmu_sc0030208.1_g000001

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0030208.1
OG0000465
Physical Location & Seq
Forward (+)
35 .. 829
795 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0030208.1_g000001.1.cds

Sequence Viewer

Length: 795 bp
atggagctctgcaagcacttggcctccagaaacttcaaagccgttttggtcatctcttccaacctctcctcctccataccctcatctctccgccaatacccactcgtcgaaatcgctgagatttctgaagcgccaccgtctgatctgccgcaggagccgagttctcacccgcttcaccgccaccacggccagctggcagtcgggcttgagaagctcctctcgacccgaaatgggagtccggactcagtccgacccctttgtgcagttctcgacaacatgatgagctggacttccgagacttttcacaagttcgagattccggcggtcagctttttcacttccggagcttgctccgccgccatggagtatgccctgtggaaggcccacccgatagatgtcaaaccgggggagacccgtttgctacccgggttacccgaagagatggctgtgacggtttcggatattaaagggcagtctcatcggccacccttccctattggtggaggcggcccgccgggagggccgggagggccaccattccctattggtggaagcggcccgccaggaggtccgggagcgggctttcctcctcatggaccaccacatggtgggcctcgcccgcgaaaaatgggtccgccgaagcccggtgacgaaccaatgtggttagaggagatcgagcagtctgttggagtgatgatcaacacttgtgacgagctagagcatccgtttatcgaatacgtctccaacaagattgaaaaacccgtttggggagtgggcccgctgttacccgagcaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

265

Amino Acids

28.26

Weight (kDa)

5.75

Isoelectric Point (pI)

63.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000465)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48790 AT5G48790 AT5G48790
fragaria_vesca FvH4_5g23760 FvH4_5g23760 FvH4_5g23770 FvH4_5g23771 FvH4_5g23790 FvH4_5g23800 FvH4_7g03421 FvH4_7g07510
malus_domestica MD00G1000600.v1.1 MD06G1013900.v1.1
prunus_persica Prupe.2G101800_v2.0.a1 Prupe.5G022600_v2.0.a1 Prupe.5G022700_v2.0.a1
pyrus_communis pycom07g06280 pycom16g25400
rosa_chinensis RchiOBHm_Chr1g0337881 RchiOBHm_Chr1g0339341 RchiOBHm_Chr7g0213081 RchiOBHm_Chr7g0213111 RchiOBHm_Chr7g0213141 RchiOBHm_Chr7g0213151 RchiOBHm_Chr7g0213161 RchiOBHm_Chr7g0213181
rosa_laevigata RLG00000002825 RLG00000002828 RLG00000002829 RLG00000002832 RLG00000029226
rosa_multiflora Rmu_co8345885.1_g000002 Rmu_co8348513.1_g000001 Rmu_co8456259.1_g000001 Rmu_sc0000613.1_g000002 Rmu_sc0001121.1_g000005 Rmu_sc0001121.1_g000006 Rmu_sc0002989.1_g000003 Rmu_sc0015110.1_g000001 Rmu_sc0030208.1_g000001 Rmu_sc0030209.1_g000001 Rmu_sc0032877.1_g000001 Rmu_sc0039394.1_g000001 Rmu_ssc0000084.1_g000002 Rmu_ssc0000084.1_g000007 Rmu_ssc0000084.1_g000009 Rmu_ssc0000084.1_g000012
rosa_roxburghii Rroxscaffold_3G00246200 Rroxscaffold_3G00246210 Rroxscaffold_3G00246240 Rroxscaffold_3G00246250 Rroxscaffold_4G00313440
rosa_rugosa Rorug01G0142600.1 Rorug07G0139400 Rorug07G0139500 Rorug07G0139600 Rorug07G0139700.1 Rorug07G0139800 Rorug07G0140100
rosa_samantha Rh1AG159300 Rh1BG126400 Rh1CG148500 Rh7AG270700 Rh7AG270800 Rh7AG271200 Rh7AG271400 Rh7AG271500 Rh7BG266400 Rh7BG266600 Rh7BG267000 Rh7BG267100 Rh7BG267200 Rh7BG267400 Rh7CG290000 Rh7CG290100 Rh7CG290600 Rh7CG290700 Rh7CG290800 Rh7DG278900 Rh7DG279200 Rh7DG279300 Rh7DG279400 Rh7DG279500 Rh7DG279600
rosa_wichuraiana Rw1G013550 Rw7G023520 Rw7G023530 Rw7G023540 Rw7G023550 Rw7G023560 Rw7G023580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 605, 608
AccBSI CCGCTC 1 cut(s) 578
AccII CGCG 1 cut(s) 622
AccIII TCCGGA 2 cut(s) 238, 341
AcoI YGGCCR 2 cut(s) 187, 482
AcuI CTGAAG 1 cut(s) 147
AdeI CACNNNGTG 1 cut(s) 608
AgsI TTSAA 2 cut(s) 37, 755
AjnI CCWGG 1 cut(s) 562
AluBI AGCT 7 cut(s) 7, 193, 214, 285, 330, 347, 715
AluI AGCT 7 cut(s) 7, 193, 214, 285, 330, 347, 715
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 4 cut(s) 290, 404, 480, 745
Ama87I CYCGRG 2 cut(s) 425, 788
Aor13HI TCCGGA 2 cut(s) 238, 341
ApaI GGGCCC 1 cut(s) 779
ArsI GACNNNNNNTTYG 4 cut(s) 220, 252, 616, 648
AspLEI GCGC 1 cut(s) 133
AsuC2I CCSGG 7 cut(s) 405, 426, 427, 516, 525, 573, 645
AsuHPI GGTGA 3 cut(s) 158, 167, 659
AvaI CYCGRG 2 cut(s) 425, 788
AvaII GGWCC 3 cut(s) 569, 596, 632
BaeGI GKGCMC 1 cut(s) 779
BanII GRGCYC 2 cut(s) 9, 779
Bbv12I GWGCWC 1 cut(s) 9
BccI CCATC 1 cut(s) 436
BceAI ACGGC 2 cut(s) 26, 202
BcgI CGANNNNNNTGC 2 cut(s) 461, 495
BciT130I CCWGG 1 cut(s) 564
BclI TGATCA 1 cut(s) 696
BcnI CCSGG 7 cut(s) 405, 426, 427, 516, 525, 573, 645
BcoDI GTCTC 4 cut(s) 290, 404, 480, 745
BfaI CTAG 1 cut(s) 716
BfoI RGCGCY 1 cut(s) 134
BglI GCCNNNNNGGC 3 cut(s) 186, 520, 529
BisI GCNGC 4 cut(s) 149, 357, 508, 556
BlsI GCNGC 4 cut(s) 150, 358, 509, 557
Bme1390I CCNGG 8 cut(s) 405, 426, 427, 516, 525, 564, 573, 645
Bme18I GGWCC 3 cut(s) 569, 596, 632
BmeT110I CYCGRG 2 cut(s) 425, 788
BmiI GGNNCC 3 cut(s) 156, 633, 777
BmrFI CCNGG 8 cut(s) 405, 426, 427, 516, 525, 564, 573, 645
BmsI GCATC 1 cut(s) 730
BpmI CTGGAG 1 cut(s) 10
BpuEI CTTGAG 1 cut(s) 227
BpuMI CCSGG 7 cut(s) 405, 426, 427, 516, 525, 573, 645
BsaI GGTCTC 1 cut(s) 404
BsaJI CCNNGG 4 cut(s) 184, 360, 404, 425
BsaWI WCCGGW 2 cut(s) 238, 341
BsaXI ACNNNNNCTCC 4 cut(s) 8, 38, 53, 83
BseAI TCCGGA 2 cut(s) 238, 341
BseBI CCWGG 1 cut(s) 564
BseDI CCNNGG 4 cut(s) 184, 360, 404, 425
BseGI GGATG 1 cut(s) 721
BseMII CTCAG 2 cut(s) 108, 258
BseRI GAGGAG 5 cut(s) 58, 61, 206, 579, 683
BseSI GKGCMC 1 cut(s) 779
BsgI GTGCAG 1 cut(s) 282
Bsh1236I CGCG 1 cut(s) 622
BsiHKAI GWGCWC 1 cut(s) 9
BsiHKCI CYCGRG 2 cut(s) 425, 788
BsiSI CCGG 9 cut(s) 239, 320, 342, 404, 426, 515, 524, 572, 645
BsmAI GTCTC 4 cut(s) 290, 404, 480, 745
BsmBI CGTCTC 1 cut(s) 745
Bso31I GGTCTC 1 cut(s) 404
BsoBI CYCGRG 2 cut(s) 425, 788
Bsp120I GGGCCC 1 cut(s) 775
Bsp1286I GDGCHC 2 cut(s) 9, 779
Bsp13I TCCGGA 2 cut(s) 238, 341
Bsp143I GATC 3 cut(s) 142, 672, 696
Bsp19I CCATGG 1 cut(s) 360
BspCNI CTCAG 2 cut(s) 109, 257
BspEI TCCGGA 2 cut(s) 238, 341
BspFNI CGCG 1 cut(s) 622
BspLI GGNNCC 3 cut(s) 156, 633, 777
BspTNI GGTCTC 1 cut(s) 404
BsrBI CCGCTC 1 cut(s) 578
BssECI CCNNGG 4 cut(s) 184, 360, 404, 425
BssMI GATC 3 cut(s) 142, 672, 696
BssT1I CCWWGG 1 cut(s) 360
Bst2UI CCWGG 1 cut(s) 564
Bst4CI ACNGT 2 cut(s) 138, 454
Bst6I CTCTTC 2 cut(s) 61, 432
BstC8I GCNNGC 9 cut(s) 14, 191, 195, 349, 512, 560, 580, 620, 779
BstDEI CTNAG 2 cut(s) 117, 244
BstDSI CCRYGG 2 cut(s) 184, 360
BstEII GGTNACC 1 cut(s) 429
BstENI CCTNNNNNAGG 1 cut(s) 377
BstF5I GGATG 1 cut(s) 721
BstFNI CGCG 1 cut(s) 622
BstH2I RGCGCY 1 cut(s) 134
BstHHI GCGC 1 cut(s) 133
BstKTI GATC 3 cut(s) 145, 675, 699
BstMAI GTCTC 4 cut(s) 290, 404, 480, 745
BstMBI GATC 3 cut(s) 142, 672, 696
BstMWI GCNNNNNNNGC 8 cut(s) 13, 154, 186, 211, 353, 520, 529, 619
BstNI CCWGG 1 cut(s) 564
BstPI GGTNACC 1 cut(s) 429
BstSCI CCNGG 8 cut(s) 403, 424, 425, 514, 523, 562, 571, 643
BstSLI GKGCMC 1 cut(s) 779
BstUI CGCG 1 cut(s) 622
BtgI CCRYGG 2 cut(s) 184, 360
BtsCI GGATG 1 cut(s) 721
Cac8I GCNNGC 9 cut(s) 14, 191, 195, 349, 512, 560, 580, 620, 779
CfoI GCGC 1 cut(s) 133
Cfr9I CCCGGG 1 cut(s) 425
CviAII CATG 4 cut(s) 277, 361, 593, 605
DdeI CTNAG 2 cut(s) 117, 244
DpnI GATC 3 cut(s) 144, 674, 698
DpnII GATC 3 cut(s) 142, 672, 696
DraIII CACNNNGTG 1 cut(s) 608
EaeI YGGCCR 2 cut(s) 187, 482
Eam1104I CTCTTC 2 cut(s) 61, 432
EarI CTCTTC 2 cut(s) 61, 432
EciI GGCGGA 3 cut(s) 80, 343, 624
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 360
Eco24I GRGCYC 2 cut(s) 9, 779
Eco31I GGTCTC 1 cut(s) 404
Eco47I GGWCC 3 cut(s) 569, 596, 632
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 147
Eco88I CYCGRG 2 cut(s) 425, 788
Eco91I GGTNACC 1 cut(s) 429
EcoICRI GAGCTC 1 cut(s) 7
EcoNI CCTNNNNNAGG 1 cut(s) 377
EcoO65I GGTNACC 1 cut(s) 429
EcoRII CCWGG 1 cut(s) 562
EcoT14I CCWWGG 1 cut(s) 360
EcoT38I GRGCYC 2 cut(s) 9, 779
ErhI CCWWGG 1 cut(s) 360
Esp3I CGTCTC 1 cut(s) 745
FaeI CATG 4 cut(s) 280, 364, 596, 608
FaiI YATR 6 cut(s) 77, 278, 362, 369, 594, 606
FatI CATG 4 cut(s) 276, 360, 592, 604
FauI CCCGC 6 cut(s) 177, 519, 567, 571, 627, 786
FbaI TGATCA 1 cut(s) 696
Fnu4HI GCNGC 4 cut(s) 149, 357, 508, 556
FokI GGATG 1 cut(s) 708
FriOI GRGCYC 2 cut(s) 9, 779
Fsp4HI GCNGC 4 cut(s) 149, 357, 508, 556
FspBI CTAG 1 cut(s) 716
GlaI GCGC 1 cut(s) 132
GluI GCNGC 4 cut(s) 149, 357, 508, 556
GsuI CTGGAG 1 cut(s) 10
HaeII RGCGCY 1 cut(s) 134
HapII CCGG 9 cut(s) 239, 320, 342, 404, 426, 515, 524, 572, 645
HhaI GCGC 1 cut(s) 133
Hin1II CATG 4 cut(s) 280, 364, 596, 608
Hin6I GCGC 1 cut(s) 131
HinP1I GCGC 1 cut(s) 131
HinfI GANTC 3 cut(s) 235, 242, 316
HpaII CCGG 9 cut(s) 239, 320, 342, 404, 426, 515, 524, 572, 645
HphI GGTGA 3 cut(s) 158, 167, 659
Hpy188I TCNGA 5 cut(s) 127, 142, 251, 295, 460
Hpy188III TCNNGA 6 cut(s) 27, 220, 239, 269, 313, 342
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 2 cut(s) 373, 499
HpyCH4III ACNGT 2 cut(s) 138, 454
HpyCH4IV ACGT 1 cut(s) 738
HpyCH4V TGCA 2 cut(s) 12, 263
HpyF10VI GCNNNNNNNGC 8 cut(s) 13, 154, 186, 211, 353, 520, 529, 619
HpyF3I CTNAG 2 cut(s) 117, 244
HpySE526I ACGT 1 cut(s) 738
Hsp92II CATG 4 cut(s) 280, 364, 596, 608
HspAI GCGC 1 cut(s) 131
Kpn2I TCCGGA 2 cut(s) 238, 341
Ksp22I TGATCA 1 cut(s) 696
Kzo9I GATC 3 cut(s) 142, 672, 696
LmnI GCTCC 6 cut(s) 4, 154, 219, 344, 356, 575
LweI GCATC 1 cut(s) 730
MaeI CTAG 1 cut(s) 716
MaeII ACGT 1 cut(s) 738
MaeIII GTNAC 5 cut(s) 429, 448, 647, 707, 783
MalI GATC 3 cut(s) 144, 674, 698
MbiI CCGCTC 1 cut(s) 578
MboI GATC 3 cut(s) 142, 672, 696
MboII GAAGA 2 cut(s) 48, 449
MhlI GDGCHC 2 cut(s) 9, 779
MlyI GAGTC 2 cut(s) 236, 244
MmeI TCCRAC 4 cut(s) 84, 274, 667, 768
MroI TCCGGA 2 cut(s) 238, 341
MseI TTAA 1 cut(s) 465
MspA1I CMGCKG 2 cut(s) 193, 781
MspI CCGG 9 cut(s) 239, 320, 342, 404, 426, 515, 524, 572, 645
MspR9I CCNGG 8 cut(s) 405, 426, 427, 516, 525, 564, 573, 645
MvaI CCWGG 1 cut(s) 564
MvnI CGCG 1 cut(s) 622
MwoI GCNNNNNNNGC 8 cut(s) 13, 154, 186, 211, 353, 520, 529, 619
NciI CCSGG 7 cut(s) 405, 426, 427, 516, 525, 573, 645
NcoI CCATGG 1 cut(s) 360
NdeII GATC 3 cut(s) 142, 672, 696
NlaIII CATG 4 cut(s) 280, 364, 596, 608
NlaIV GGNNCC 3 cut(s) 156, 633, 777
NmeAIII GCCGAG 1 cut(s) 183
NmuCI GTSAC 3 cut(s) 448, 647, 707
PfeI GAWTC 1 cut(s) 316
PflFI GACNNNGTC 1 cut(s) 245
PflMI CCANNNNNTGG 2 cut(s) 605, 608
PfoI TCCNGGA 1 cut(s) 571
PkrI GCNGC 4 cut(s) 150, 358, 509, 557
PleI GAGTC 2 cut(s) 236, 243
PpsI GAGTC 2 cut(s) 236, 243
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 1 cut(s) 562
PspEI GGTNACC 1 cut(s) 429
PspGI CCWGG 1 cut(s) 562
PspN4I GGNNCC 3 cut(s) 156, 633, 777
PspOMI GGGCCC 1 cut(s) 775
PsyI GACNNNGTC 1 cut(s) 245
PvuII CAGCTG 1 cut(s) 193
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 1 cut(s) 465
SatI GCNGC 4 cut(s) 149, 357, 508, 556
Sau3AI GATC 3 cut(s) 142, 672, 696
SchI GAGTC 2 cut(s) 236, 244
ScrFI CCNGG 8 cut(s) 405, 426, 427, 516, 525, 564, 573, 645
SduI GDGCHC 2 cut(s) 9, 779
SfaNI GCATC 1 cut(s) 730
SfiI GGCCNNNNNGGCC 1 cut(s) 529
SinI GGWCC 3 cut(s) 569, 596, 632
SmaI CCCGGG 1 cut(s) 427
SmlI CTYRAG 1 cut(s) 206
SmoI CTYRAG 1 cut(s) 206
SspMI CTAG 1 cut(s) 716
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 8 cut(s) 403, 424, 425, 514, 523, 562, 571, 643
StyI CCWWGG 1 cut(s) 360
TaaI ACNGT 2 cut(s) 138, 454
TaiI ACGT 1 cut(s) 741
TaqI TCGA 6 cut(s) 108, 221, 270, 312, 675, 732
TauI GCSGC 4 cut(s) 151, 359, 510, 558
TfiI GAWTC 1 cut(s) 316
Tru1I TTAA 1 cut(s) 465
Tru9I TTAA 1 cut(s) 465
TseFI GTSAC 3 cut(s) 448, 647, 707
Tsp45I GTSAC 3 cut(s) 448, 647, 707
TspGWI ACGGA 1 cut(s) 714
TspMI CCCGGG 1 cut(s) 425
Tth111I GACNNNGTC 1 cut(s) 245
Van91I CCANNNNNTGG 2 cut(s) 605, 608
VpaK11BI GGWCC 3 cut(s) 569, 596, 632
XagI CCTNNNNNAGG 1 cut(s) 377
XmaI CCCGGG 1 cut(s) 425
XspI CTAG 1 cut(s) 716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.