Rh7DG279200

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000465
Physical Location & Seq
Forward (+)
30130677 .. 30132248
1572 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG279200.1

Sequence Viewer

Length: 906 bp
ATGGCAAATGAGATATGGATCATTCCGTTTTTCGGTCAGGGCCATCTCTTGCCTTTAATGGAGCTCTGCAAGCACTTAGCCTCCAGAAACTTCAAAGCCGTTTTCGTCATCTCTTCCAACCTCTCCTCCTCCATACCCTCATCTCTCCGCCAATACCCACTCGTCGAAATCGCTGAGATTTCTGAAGCACCACCGTCTGATCCGTCGTCCCCGCCGCAGGAGCCGAGTTCTCAGCCGCATCACCGCCACCACGGCCAGATGGCAGTCGGGCTTGAGAACCTCCTCTCGACCCGAAACGAGAGTCCGGATTCAGTCCGACCCCTTTGTGCAGTTCTTGACAACATGATGAGCTGGAATTCTGAGTTTTTTCAAAAGTTTGAGATTCCGGTGGTCAGCTTTTTCACTTCCGGAGCTTGCTCCGCTGCCATGGAGTATGCCCTGTGGAAGGCCCACCCGATAGATGTCAAACCGGGCGAGACCCGTTTGCTACCGGGGTTACCCGAAGAGATGGCTGTGACGGTTTCGGATATTAAACGGGAGTCTCGTCGGCCACCATTCCCCATTGGTGGAGGCGGCCCGCCAGGAGGGCCGGGAGGTCCAGGAGCGGGCTTTCCTCCTCATGGACCACCACATGGTGGGCCTGGCCCGCGAAGAATGGGTCCGCCAAAGCCCGGTGACCAACCACATTGGTTAGAGGAGGTCGAGCAATCTATTGGAGTGATGATCAACACGTGTGATGAGCTAGAGCATCCATTTATCGAATACGTCTCTAACAAGATTGAAAAACCCGTTTGGGGAGTGGGCCCGCTGTTACCCGAGCAATATTGGAAATCGGCTCATTCAGTTCTCCATGATCGCGAAGTTCGAACCAATCGGAAATCGAACTTCACCGAAGACGAGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

301

Amino Acids

33.1

Weight (kDa)

5.71

Isoelectric Point (pI)

63.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000465)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48790 AT5G48790 AT5G48790
fragaria_vesca FvH4_5g23760 FvH4_5g23760 FvH4_5g23770 FvH4_5g23771 FvH4_5g23790 FvH4_5g23800 FvH4_7g03421 FvH4_7g07510
malus_domestica MD00G1000600.v1.1 MD06G1013900.v1.1
prunus_persica Prupe.2G101800_v2.0.a1 Prupe.5G022600_v2.0.a1 Prupe.5G022700_v2.0.a1
pyrus_communis pycom07g06280 pycom16g25400
rosa_chinensis RchiOBHm_Chr1g0337881 RchiOBHm_Chr1g0339341 RchiOBHm_Chr7g0213081 RchiOBHm_Chr7g0213111 RchiOBHm_Chr7g0213141 RchiOBHm_Chr7g0213151 RchiOBHm_Chr7g0213161 RchiOBHm_Chr7g0213181
rosa_laevigata RLG00000002825 RLG00000002828 RLG00000002829 RLG00000002832 RLG00000029226
rosa_multiflora Rmu_co8345885.1_g000002 Rmu_co8348513.1_g000001 Rmu_co8456259.1_g000001 Rmu_sc0000613.1_g000002 Rmu_sc0001121.1_g000005 Rmu_sc0001121.1_g000006 Rmu_sc0002989.1_g000003 Rmu_sc0015110.1_g000001 Rmu_sc0030208.1_g000001 Rmu_sc0030209.1_g000001 Rmu_sc0032877.1_g000001 Rmu_sc0039394.1_g000001 Rmu_ssc0000084.1_g000002 Rmu_ssc0000084.1_g000007 Rmu_ssc0000084.1_g000009 Rmu_ssc0000084.1_g000012
rosa_roxburghii Rroxscaffold_3G00246200 Rroxscaffold_3G00246210 Rroxscaffold_3G00246240 Rroxscaffold_3G00246250 Rroxscaffold_4G00313440
rosa_rugosa Rorug01G0142600.1 Rorug07G0139400 Rorug07G0139500 Rorug07G0139600 Rorug07G0139700.1 Rorug07G0139800 Rorug07G0140100
rosa_samantha Rh1AG159300 Rh1BG126400 Rh1CG148500 Rh7AG270700 Rh7AG270800 Rh7AG271200 Rh7AG271400 Rh7AG271500 Rh7BG266400 Rh7BG266600 Rh7BG267000 Rh7BG267100 Rh7BG267200 Rh7BG267400 Rh7CG290000 Rh7CG290100 Rh7CG290600 Rh7CG290700 Rh7CG290800 Rh7DG278900 Rh7DG279200 Rh7DG279300 Rh7DG279400 Rh7DG279500 Rh7DG279600
rosa_wichuraiana Rw1G013550 Rw7G023520 Rw7G023530 Rw7G023540 Rw7G023550 Rw7G023560 Rw7G023580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 632, 635
AccBSI CCGCTC 1 cut(s) 605
AccII CGCG 2 cut(s) 649, 858
AccIII TCCGGA 2 cut(s) 304, 407
AclWI GGATC 2 cut(s) 26, 194
AcoI YGGCCR 2 cut(s) 253, 548
AcsI RAATTY 1 cut(s) 355
AcuI CTGAAG 1 cut(s) 204
AcvI CACGTG 1 cut(s) 732
AdeI CACNNNGTG 1 cut(s) 635
AflIII ACRYGT 2 cut(s) 729, 731
AgsI TTSAA 3 cut(s) 94, 371, 782
AjnI CCWGG 3 cut(s) 580, 598, 640
AluBI AGCT 5 cut(s) 64, 351, 396, 413, 742
AluI AGCT 5 cut(s) 64, 351, 396, 413, 742
Alw21I GWGCWC 1 cut(s) 66
Alw26I GTCTC 3 cut(s) 470, 546, 772
AlwI GGATC 2 cut(s) 26, 194
Ama87I CYCGRG 1 cut(s) 815
Aor13HI TCCGGA 2 cut(s) 304, 407
AoxI GGCC 9 cut(s) 40, 253, 447, 548, 574, 587, 638, 643, 802
ApaI GGGCCC 1 cut(s) 806
ApeKI GCWGC 1 cut(s) 422
ApoI RAATTY 1 cut(s) 355
ArsI GACNNNNNNTTYG 4 cut(s) 286, 318, 643, 675
AsuC2I CCSGG 4 cut(s) 471, 492, 591, 672
AsuHPI GGTGA 3 cut(s) 233, 686, 880
AsuII TTCGAA 1 cut(s) 865
AvaI CYCGRG 1 cut(s) 815
AvaII GGWCC 3 cut(s) 596, 623, 659
BaeGI GKGCMC 1 cut(s) 806
BanII GRGCYC 2 cut(s) 66, 806
BbrPI CACGTG 1 cut(s) 732
BbsI GAAGAC 1 cut(s) 900
Bbv12I GWGCWC 1 cut(s) 66
BbvI GCAGC 1 cut(s) 409
BccI CCATC 3 cut(s) 51, 253, 502
BceAI ACGGC 2 cut(s) 83, 268
BciT130I CCWGG 3 cut(s) 582, 600, 642
BclI TGATCA 1 cut(s) 723
BcnI CCSGG 4 cut(s) 471, 492, 591, 672
BcoDI GTCTC 3 cut(s) 470, 546, 772
BfaI CTAG 1 cut(s) 743
BglI GCCNNNNNGGC 2 cut(s) 252, 586
BisI GCNGC 4 cut(s) 215, 236, 423, 574
BlsI GCNGC 4 cut(s) 216, 237, 424, 575
Bme1390I CCNGG 7 cut(s) 471, 492, 582, 591, 600, 642, 672
Bme18I GGWCC 3 cut(s) 596, 623, 659
BmeT110I CYCGRG 1 cut(s) 815
BmiI GGNNCC 3 cut(s) 222, 660, 804
BmrFI CCNGG 7 cut(s) 471, 492, 582, 591, 600, 642, 672
BmsI GCATC 2 cut(s) 247, 757
BpiI GAAGAC 1 cut(s) 900
BpmI CTGGAG 1 cut(s) 67
Bpu14I TTCGAA 1 cut(s) 865
BpuEI CTTGAG 1 cut(s) 293
BpuMI CCSGG 4 cut(s) 471, 492, 591, 672
BsaAI YACGTR 1 cut(s) 732
BsaBI GATNNNNATC 1 cut(s) 17
BsaI GGTCTC 1 cut(s) 470
BsaJI CCNNGG 3 cut(s) 250, 426, 491
BsaWI WCCGGW 3 cut(s) 304, 385, 407
BsaXI ACNNNNNCTCC 4 cut(s) 65, 95, 110, 140
Bse8I GATNNNNATC 1 cut(s) 17
BseAI TCCGGA 2 cut(s) 304, 407
BseBI CCWGG 3 cut(s) 582, 600, 642
BseDI CCNNGG 3 cut(s) 250, 426, 491
BseGI GGATG 1 cut(s) 748
BseJI GATNNNNATC 1 cut(s) 17
BseMII CTCAG 3 cut(s) 165, 245, 351
BseRI GAGGAG 5 cut(s) 115, 118, 272, 606, 710
BseSI GKGCMC 1 cut(s) 806
BseXI GCAGC 1 cut(s) 409
BsgI GTGCAG 1 cut(s) 348
Bsh1236I CGCG 2 cut(s) 649, 858
BshFI GGCC 9 cut(s) 42, 255, 449, 550, 576, 589, 640, 645, 804
BsiHKAI GWGCWC 1 cut(s) 66
BsiHKCI CYCGRG 1 cut(s) 815
BsiSI CCGG 7 cut(s) 305, 386, 408, 470, 491, 590, 672
BslFI GGGAC 1 cut(s) 193
BsmAI GTCTC 3 cut(s) 470, 546, 772
BsmBI CGTCTC 1 cut(s) 772
BsmFI GGGAC 1 cut(s) 193
BsnI GGCC 9 cut(s) 42, 255, 449, 550, 576, 589, 640, 645, 804
Bso31I GGTCTC 1 cut(s) 470
BsoBI CYCGRG 1 cut(s) 815
Bsp119I TTCGAA 1 cut(s) 865
Bsp120I GGGCCC 1 cut(s) 802
Bsp1286I GDGCHC 2 cut(s) 66, 806
Bsp13I TCCGGA 2 cut(s) 304, 407
Bsp143I GATC 4 cut(s) 18, 199, 723, 853
Bsp19I CCATGG 1 cut(s) 426
Bsp68I TCGCGA 1 cut(s) 858
BspANI GGCC 9 cut(s) 42, 255, 449, 550, 576, 589, 640, 645, 804
BspCNI CTCAG 3 cut(s) 166, 244, 352
BspEI TCCGGA 2 cut(s) 304, 407
BspFNI CGCG 2 cut(s) 649, 858
BspLI GGNNCC 3 cut(s) 222, 660, 804
BspPI GGATC 2 cut(s) 26, 194
BspT104I TTCGAA 1 cut(s) 865
BspTNI GGTCTC 1 cut(s) 470
BsrBI CCGCTC 1 cut(s) 605
BssECI CCNNGG 3 cut(s) 250, 426, 491
BssMI GATC 4 cut(s) 18, 199, 723, 853
BssT1I CCWWGG 1 cut(s) 426
Bst2UI CCWGG 3 cut(s) 582, 600, 642
Bst4CI ACNGT 2 cut(s) 195, 520
Bst6I CTCTTC 2 cut(s) 118, 498
BstBAI YACGTR 1 cut(s) 732
BstBI TTCGAA 1 cut(s) 865
BstC8I GCNNGC 6 cut(s) 71, 415, 578, 607, 647, 806
BstDEI CTNAG 4 cut(s) 76, 174, 231, 360
BstDSI CCRYGG 2 cut(s) 250, 426
BstEII GGTNACC 2 cut(s) 495, 674
BstENI CCTNNNNNAGG 1 cut(s) 443
BstF5I GGATG 1 cut(s) 748
BstFNI CGCG 2 cut(s) 649, 858
BstKTI GATC 4 cut(s) 21, 202, 726, 856
BstMAI GTCTC 3 cut(s) 470, 546, 772
BstMBI GATC 4 cut(s) 18, 199, 723, 853
BstMWI GCNNNNNNNGC 6 cut(s) 70, 220, 252, 419, 586, 646
BstNI CCWGG 3 cut(s) 582, 600, 642
BstPI GGTNACC 2 cut(s) 495, 674
BstSCI CCNGG 7 cut(s) 469, 490, 580, 589, 598, 640, 670
BstSLI GKGCMC 1 cut(s) 806
BstUI CGCG 2 cut(s) 649, 858
BstV1I GCAGC 1 cut(s) 409
BstV2I GAAGAC 1 cut(s) 900
BsuRI GGCC 9 cut(s) 42, 255, 449, 550, 576, 589, 640, 645, 804
BtgI CCRYGG 2 cut(s) 250, 426
BtsCI GGATG 1 cut(s) 748
BtuMI TCGCGA 1 cut(s) 858
Cac8I GCNNGC 6 cut(s) 71, 415, 578, 607, 647, 806
CviAII CATG 5 cut(s) 343, 427, 620, 632, 851
DdeI CTNAG 4 cut(s) 76, 174, 231, 360
DpnI GATC 4 cut(s) 20, 201, 725, 855
DpnII GATC 4 cut(s) 18, 199, 723, 853
DraIII CACNNNGTG 1 cut(s) 635
EaeI YGGCCR 2 cut(s) 253, 548
Eam1104I CTCTTC 2 cut(s) 118, 498
EarI CTCTTC 2 cut(s) 118, 498
EciI GGCGGA 2 cut(s) 137, 651
Ecl136II GAGCTC 1 cut(s) 64
Eco130I CCWWGG 1 cut(s) 426
Eco24I GRGCYC 2 cut(s) 66, 806
Eco31I GGTCTC 1 cut(s) 470
Eco47I GGWCC 3 cut(s) 596, 623, 659
Eco53kI GAGCTC 1 cut(s) 64
Eco57I CTGAAG 1 cut(s) 204
Eco72I CACGTG 1 cut(s) 732
Eco88I CYCGRG 1 cut(s) 815
Eco91I GGTNACC 2 cut(s) 495, 674
EcoICRI GAGCTC 1 cut(s) 64
EcoNI CCTNNNNNAGG 1 cut(s) 443
EcoO65I GGTNACC 2 cut(s) 495, 674
EcoRI GAATTC 1 cut(s) 355
EcoRII CCWGG 3 cut(s) 580, 598, 640
EcoT14I CCWWGG 1 cut(s) 426
EcoT38I GRGCYC 2 cut(s) 66, 806
ErhI CCWWGG 1 cut(s) 426
Esp3I CGTCTC 1 cut(s) 772
FaeI CATG 5 cut(s) 346, 430, 623, 635, 854
FaiI YATR 8 cut(s) 16, 134, 344, 428, 435, 621, 633, 852
FaqI GGGAC 1 cut(s) 193
FatI CATG 5 cut(s) 342, 426, 619, 631, 850
FauI CCCGC 5 cut(s) 219, 585, 598, 654, 813
FbaI TGATCA 1 cut(s) 723
Fnu4HI GCNGC 4 cut(s) 215, 236, 423, 574
FokI GGATG 1 cut(s) 735
FriOI GRGCYC 2 cut(s) 66, 806
Fsp4HI GCNGC 4 cut(s) 215, 236, 423, 574
FspBI CTAG 1 cut(s) 743
GluI GCNGC 4 cut(s) 215, 236, 423, 574
GsuI CTGGAG 1 cut(s) 67
HaeIII GGCC 9 cut(s) 42, 255, 449, 550, 576, 589, 640, 645, 804
HapII CCGG 7 cut(s) 305, 386, 408, 470, 491, 590, 672
Hin1II CATG 5 cut(s) 346, 430, 623, 635, 854
HinfI GANTC 5 cut(s) 301, 308, 382, 539, 899
HpaII CCGG 7 cut(s) 305, 386, 408, 470, 491, 590, 672
HphI GGTGA 3 cut(s) 233, 686, 880
Hpy188I TCNGA 6 cut(s) 184, 199, 317, 361, 526, 876
Hpy188III TCNNGA 7 cut(s) 84, 286, 305, 335, 408, 857, 903
Hpy99I CGWCG 3 cut(s) 167, 208, 549
HpyAV CCTTC 1 cut(s) 439
HpyCH4III ACNGT 2 cut(s) 195, 520
HpyCH4IV ACGT 2 cut(s) 731, 765
HpyCH4V TGCA 2 cut(s) 69, 329
HpyF10VI GCNNNNNNNGC 6 cut(s) 70, 220, 252, 419, 586, 646
HpyF3I CTNAG 4 cut(s) 76, 174, 231, 360
HpySE526I ACGT 2 cut(s) 731, 765
Hsp92II CATG 5 cut(s) 346, 430, 623, 635, 854
Kpn2I TCCGGA 2 cut(s) 304, 407
Ksp22I TGATCA 1 cut(s) 723
Kzo9I GATC 4 cut(s) 18, 199, 723, 853
LmnI GCTCC 5 cut(s) 61, 220, 410, 422, 602
Lsp1109I GCAGC 1 cut(s) 409
LweI GCATC 2 cut(s) 247, 757
MaeI CTAG 1 cut(s) 743
MaeII ACGT 2 cut(s) 731, 765
MaeIII GTNAC 4 cut(s) 495, 514, 674, 810
MalI GATC 4 cut(s) 20, 201, 725, 855
MbiI CCGCTC 1 cut(s) 605
MboI GATC 4 cut(s) 18, 199, 723, 853
MboII GAAGA 4 cut(s) 105, 515, 663, 905
MhlI GDGCHC 2 cut(s) 66, 806
MluCI AATT 1 cut(s) 355
MlyI GAGTC 2 cut(s) 310, 548
MmeI TCCRAC 2 cut(s) 141, 340
MroI TCCGGA 2 cut(s) 304, 407
MseI TTAA 2 cut(s) 56, 531
MspA1I CMGCKG 2 cut(s) 422, 808
MspI CCGG 7 cut(s) 305, 386, 408, 470, 491, 590, 672
MspR9I CCNGG 7 cut(s) 471, 492, 582, 591, 600, 642, 672
MvaI CCWGG 3 cut(s) 582, 600, 642
MvnI CGCG 2 cut(s) 649, 858
MwoI GCNNNNNNNGC 6 cut(s) 70, 220, 252, 419, 586, 646
NciI CCSGG 4 cut(s) 471, 492, 591, 672
NcoI CCATGG 1 cut(s) 426
NdeII GATC 4 cut(s) 18, 199, 723, 853
NlaIII CATG 5 cut(s) 346, 430, 623, 635, 854
NlaIV GGNNCC 3 cut(s) 222, 660, 804
NmeAIII GCCGAG 1 cut(s) 249
NmuCI GTSAC 2 cut(s) 514, 674
NruI TCGCGA 1 cut(s) 858
NspV TTCGAA 1 cut(s) 865
PcsI WCGNNNNNNNCGW 2 cut(s) 541, 862
PfeI GAWTC 2 cut(s) 308, 382
PflMI CCANNNNNTGG 2 cut(s) 632, 635
PfoI TCCNGGA 1 cut(s) 598
PkrI GCNGC 4 cut(s) 216, 237, 424, 575
PleI GAGTC 2 cut(s) 309, 547
PmaCI CACGTG 1 cut(s) 732
PmlI CACGTG 1 cut(s) 732
PpsI GAGTC 2 cut(s) 309, 547
Ppu21I YACGTR 1 cut(s) 732
Psp124BI GAGCTC 1 cut(s) 66
Psp6I CCWGG 3 cut(s) 580, 598, 640
PspCI CACGTG 1 cut(s) 732
PspEI GGTNACC 2 cut(s) 495, 674
PspGI CCWGG 3 cut(s) 580, 598, 640
PspN4I GGNNCC 3 cut(s) 222, 660, 804
PspOMI GGGCCC 1 cut(s) 802
RruI TCGCGA 1 cut(s) 858
SacI GAGCTC 1 cut(s) 66
SaqAI TTAA 2 cut(s) 56, 531
SatI GCNGC 4 cut(s) 215, 236, 423, 574
Sau3AI GATC 4 cut(s) 18, 199, 723, 853
SchI GAGTC 2 cut(s) 310, 548
ScrFI CCNGG 7 cut(s) 471, 492, 582, 591, 600, 642, 672
SduI GDGCHC 2 cut(s) 66, 806
SfaNI GCATC 2 cut(s) 247, 757
SfuI TTCGAA 1 cut(s) 865
SinI GGWCC 3 cut(s) 596, 623, 659
SmlI CTYRAG 1 cut(s) 272
SmoI CTYRAG 1 cut(s) 272
Sse9I AATT 1 cut(s) 355
SspI AATATT 1 cut(s) 824
SspMI CTAG 1 cut(s) 743
SstI GAGCTC 1 cut(s) 66
StyD4I CCNGG 7 cut(s) 469, 490, 580, 589, 598, 640, 670
StyI CCWWGG 1 cut(s) 426
TaaI ACNGT 2 cut(s) 195, 520
TaiI ACGT 2 cut(s) 734, 768
TaqI TCGA 6 cut(s) 165, 287, 702, 759, 865, 881
TaqII GACCGA 1 cut(s) 23
TasI AATT 1 cut(s) 355
TauI GCSGC 3 cut(s) 217, 238, 576
TfiI GAWTC 2 cut(s) 308, 382
Tru1I TTAA 2 cut(s) 56, 531
Tru9I TTAA 2 cut(s) 56, 531
TseFI GTSAC 2 cut(s) 514, 674
TseI GCWGC 1 cut(s) 422
Tsp45I GTSAC 2 cut(s) 514, 674
TspGWI ACGGA 2 cut(s) 15, 192
Van91I CCANNNNNTGG 2 cut(s) 632, 635
VpaK11BI GGWCC 3 cut(s) 596, 623, 659
XagI CCTNNNNNAGG 1 cut(s) 443
XapI RAATTY 1 cut(s) 355
XspI CTAG 1 cut(s) 743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.