Rmu_sc0030209.1_g000001

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0030209.1
OG0000465
Physical Location & Seq
Forward (+)
35 .. 781
747 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0030209.1_g000001.1.cds

Sequence Viewer

Length: 747 bp
atggagctctgcaagcacttggcctccagaaacttcaaagccgttttcgtcatctcttccaacctctcctcctccataccctcatctctccgccaatacccgctcgtcgaaatcgctgagatttctgaagcgccaccgtctgatctgccgcaggagccgagttctcacccgcttcaccgccaccacggccagctggcagtcgggcttgagaagctcctctcgacccgaaatgggagtccggactcagtccgacccctttgtgcagttctcgacaacatgatgagctggacttccgagacttttcacaagttcgagattccggcggtcagctttttcacttccggagcttgctccgccgccatggagtatgccctgtggaaggcccacccgatagatgtcaaaccgggggagacccgtttgctacccgggttacccgaagagatggctgtgacggtttcggatattaaagggcagtctcatcggccacccttccctattggtggaggcggcccgccaggaggtccgggaacgggctttcctcctcatggaccacctcatggtgggcctcgcccgcgaaaaatgggtccgccaaagcccggtgacgaaccaatgtggttagaggagatcgagcagtctgttggagtgatgatcaacacttgcgacgacctagagcatccgtttatcgaatacgtctccaacaagattgaaaaacccgtttggggagtgggcccgctgttacccgagcaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

249

Amino Acids

26.98

Weight (kDa)

5.75

Isoelectric Point (pI)

61.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000465)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48790 AT5G48790 AT5G48790
fragaria_vesca FvH4_5g23760 FvH4_5g23760 FvH4_5g23770 FvH4_5g23771 FvH4_5g23790 FvH4_5g23800 FvH4_7g03421 FvH4_7g07510
malus_domestica MD00G1000600.v1.1 MD06G1013900.v1.1
prunus_persica Prupe.2G101800_v2.0.a1 Prupe.5G022600_v2.0.a1 Prupe.5G022700_v2.0.a1
pyrus_communis pycom07g06280 pycom16g25400
rosa_chinensis RchiOBHm_Chr1g0337881 RchiOBHm_Chr1g0339341 RchiOBHm_Chr7g0213081 RchiOBHm_Chr7g0213111 RchiOBHm_Chr7g0213141 RchiOBHm_Chr7g0213151 RchiOBHm_Chr7g0213161 RchiOBHm_Chr7g0213181
rosa_laevigata RLG00000002825 RLG00000002828 RLG00000002829 RLG00000002832 RLG00000029226
rosa_multiflora Rmu_co8345885.1_g000002 Rmu_co8348513.1_g000001 Rmu_co8456259.1_g000001 Rmu_sc0000613.1_g000002 Rmu_sc0001121.1_g000005 Rmu_sc0001121.1_g000006 Rmu_sc0002989.1_g000003 Rmu_sc0015110.1_g000001 Rmu_sc0030208.1_g000001 Rmu_sc0030209.1_g000001 Rmu_sc0032877.1_g000001 Rmu_sc0039394.1_g000001 Rmu_ssc0000084.1_g000002 Rmu_ssc0000084.1_g000007 Rmu_ssc0000084.1_g000009 Rmu_ssc0000084.1_g000012
rosa_roxburghii Rroxscaffold_3G00246200 Rroxscaffold_3G00246210 Rroxscaffold_3G00246240 Rroxscaffold_3G00246250 Rroxscaffold_4G00313440
rosa_rugosa Rorug01G0142600.1 Rorug07G0139400 Rorug07G0139500 Rorug07G0139600 Rorug07G0139700.1 Rorug07G0139800 Rorug07G0140100
rosa_samantha Rh1AG159300 Rh1BG126400 Rh1CG148500 Rh7AG270700 Rh7AG270800 Rh7AG271200 Rh7AG271400 Rh7AG271500 Rh7BG266400 Rh7BG266600 Rh7BG267000 Rh7BG267100 Rh7BG267200 Rh7BG267400 Rh7CG290000 Rh7CG290100 Rh7CG290600 Rh7CG290700 Rh7CG290800 Rh7DG278900 Rh7DG279200 Rh7DG279300 Rh7DG279400 Rh7DG279500 Rh7DG279600
rosa_wichuraiana Rw1G013550 Rw7G023520 Rw7G023530 Rw7G023540 Rw7G023550 Rw7G023560 Rw7G023580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 557
AccBSI CCGCTC 1 cut(s) 103
AccII CGCG 1 cut(s) 574
AccIII TCCGGA 2 cut(s) 238, 341
AcoI YGGCCR 2 cut(s) 187, 482
AcuI CTGAAG 1 cut(s) 147
AgsI TTSAA 2 cut(s) 37, 707
AjnI CCWGG 1 cut(s) 514
AloI GAACNNNNNNTCC 2 cut(s) 520, 552
AluBI AGCT 6 cut(s) 7, 193, 214, 285, 330, 347
AluI AGCT 6 cut(s) 7, 193, 214, 285, 330, 347
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 4 cut(s) 290, 404, 480, 697
Ama87I CYCGRG 2 cut(s) 425, 740
Aor13HI TCCGGA 2 cut(s) 238, 341
AoxI GGCC 7 cut(s) 21, 187, 381, 482, 508, 563, 727
ApaI GGGCCC 1 cut(s) 731
ArsI GACNNNNNNTTYG 4 cut(s) 220, 252, 568, 600
AspLEI GCGC 1 cut(s) 133
AspS9I GGNCC 8 cut(s) 382, 509, 521, 548, 563, 584, 727, 728
AsuC2I CCSGG 5 cut(s) 405, 426, 427, 525, 597
AsuHPI GGTGA 3 cut(s) 158, 167, 611
AvaI CYCGRG 2 cut(s) 425, 740
AvaII GGWCC 3 cut(s) 521, 548, 584
BaeGI GKGCMC 1 cut(s) 731
BanII GRGCYC 2 cut(s) 9, 731
Bbv12I GWGCWC 1 cut(s) 9
BccI CCATC 1 cut(s) 436
BceAI ACGGC 2 cut(s) 26, 202
BcgI CGANNNNNNTGC 2 cut(s) 461, 495
BciT130I CCWGG 1 cut(s) 516
BclI TGATCA 1 cut(s) 648
BcnI CCSGG 5 cut(s) 405, 426, 427, 525, 597
BcoDI GTCTC 4 cut(s) 290, 404, 480, 697
BfaI CTAG 1 cut(s) 668
BfoI RGCGCY 1 cut(s) 134
BglI GCCNNNNNGGC 1 cut(s) 186
BisI GCNGC 3 cut(s) 149, 357, 508
BlsI GCNGC 3 cut(s) 150, 358, 509
Bme1390I CCNGG 6 cut(s) 405, 426, 427, 516, 525, 597
Bme18I GGWCC 3 cut(s) 521, 548, 584
BmeT110I CYCGRG 2 cut(s) 425, 740
BmgT120I GGNCC 8 cut(s) 382, 509, 521, 548, 563, 584, 727, 728
BmiI GGNNCC 3 cut(s) 156, 585, 729
BmrFI CCNGG 6 cut(s) 405, 426, 427, 516, 525, 597
BmsI GCATC 1 cut(s) 682
BpmI CTGGAG 1 cut(s) 10
BpuEI CTTGAG 1 cut(s) 227
BpuMI CCSGG 5 cut(s) 405, 426, 427, 525, 597
BsaI GGTCTC 1 cut(s) 404
BsaJI CCNNGG 4 cut(s) 184, 360, 404, 425
BsaWI WCCGGW 2 cut(s) 238, 341
BsaXI ACNNNNNCTCC 4 cut(s) 8, 38, 53, 83
BseAI TCCGGA 2 cut(s) 238, 341
BseBI CCWGG 1 cut(s) 516
BseDI CCNNGG 4 cut(s) 184, 360, 404, 425
BseGI GGATG 1 cut(s) 673
BseMII CTCAG 2 cut(s) 108, 258
BseRI GAGGAG 5 cut(s) 58, 61, 206, 531, 635
BseSI GKGCMC 1 cut(s) 731
BsgI GTGCAG 1 cut(s) 282
Bsh1236I CGCG 1 cut(s) 574
BshFI GGCC 7 cut(s) 23, 189, 383, 484, 510, 565, 729
BsiHKAI GWGCWC 1 cut(s) 9
BsiHKCI CYCGRG 2 cut(s) 425, 740
BsiSI CCGG 7 cut(s) 239, 320, 342, 404, 426, 524, 597
BsmAI GTCTC 4 cut(s) 290, 404, 480, 697
BsmBI CGTCTC 1 cut(s) 697
BsnI GGCC 7 cut(s) 23, 189, 383, 484, 510, 565, 729
Bso31I GGTCTC 1 cut(s) 404
BsoBI CYCGRG 2 cut(s) 425, 740
Bsp120I GGGCCC 1 cut(s) 727
Bsp1286I GDGCHC 2 cut(s) 9, 731
Bsp13I TCCGGA 2 cut(s) 238, 341
Bsp143I GATC 3 cut(s) 142, 624, 648
Bsp19I CCATGG 1 cut(s) 360
BspANI GGCC 7 cut(s) 23, 189, 383, 484, 510, 565, 729
BspCNI CTCAG 2 cut(s) 109, 257
BspEI TCCGGA 2 cut(s) 238, 341
BspFNI CGCG 1 cut(s) 574
BspLI GGNNCC 3 cut(s) 156, 585, 729
BspTNI GGTCTC 1 cut(s) 404
BsrBI CCGCTC 1 cut(s) 103
BssECI CCNNGG 4 cut(s) 184, 360, 404, 425
BssMI GATC 3 cut(s) 142, 624, 648
BssT1I CCWWGG 1 cut(s) 360
Bst2UI CCWGG 1 cut(s) 516
Bst4CI ACNGT 2 cut(s) 138, 454
Bst6I CTCTTC 2 cut(s) 61, 432
BstC8I GCNNGC 7 cut(s) 14, 191, 195, 349, 512, 572, 731
BstDEI CTNAG 2 cut(s) 117, 244
BstDSI CCRYGG 2 cut(s) 184, 360
BstEII GGTNACC 1 cut(s) 429
BstENI CCTNNNNNAGG 1 cut(s) 377
BstF5I GGATG 1 cut(s) 673
BstFNI CGCG 1 cut(s) 574
BstH2I RGCGCY 1 cut(s) 134
BstHHI GCGC 1 cut(s) 133
BstKTI GATC 3 cut(s) 145, 627, 651
BstMAI GTCTC 4 cut(s) 290, 404, 480, 697
BstMBI GATC 3 cut(s) 142, 624, 648
BstMWI GCNNNNNNNGC 6 cut(s) 13, 154, 186, 211, 353, 571
BstNI CCWGG 1 cut(s) 516
BstPI GGTNACC 1 cut(s) 429
BstSCI CCNGG 6 cut(s) 403, 424, 425, 514, 523, 595
BstSLI GKGCMC 1 cut(s) 731
BstUI CGCG 1 cut(s) 574
BsuRI GGCC 7 cut(s) 23, 189, 383, 484, 510, 565, 729
BtgI CCRYGG 2 cut(s) 184, 360
BtsCI GGATG 1 cut(s) 673
Cac8I GCNNGC 7 cut(s) 14, 191, 195, 349, 512, 572, 731
CfoI GCGC 1 cut(s) 133
Cfr13I GGNCC 8 cut(s) 382, 509, 521, 548, 563, 584, 727, 728
Cfr9I CCCGGG 1 cut(s) 425
CviAII CATG 4 cut(s) 277, 361, 545, 557
DdeI CTNAG 2 cut(s) 117, 244
DpnI GATC 3 cut(s) 144, 626, 650
DpnII GATC 3 cut(s) 142, 624, 648
EaeI YGGCCR 2 cut(s) 187, 482
Eam1104I CTCTTC 2 cut(s) 61, 432
EarI CTCTTC 2 cut(s) 61, 432
EciI GGCGGA 3 cut(s) 80, 343, 576
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 360
Eco24I GRGCYC 2 cut(s) 9, 731
Eco31I GGTCTC 1 cut(s) 404
Eco47I GGWCC 3 cut(s) 521, 548, 584
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 1 cut(s) 147
Eco88I CYCGRG 2 cut(s) 425, 740
Eco91I GGTNACC 1 cut(s) 429
EcoICRI GAGCTC 1 cut(s) 7
EcoNI CCTNNNNNAGG 1 cut(s) 377
EcoO65I GGTNACC 1 cut(s) 429
EcoRII CCWGG 1 cut(s) 514
EcoT14I CCWWGG 1 cut(s) 360
EcoT38I GRGCYC 2 cut(s) 9, 731
ErhI CCWWGG 1 cut(s) 360
Esp3I CGTCTC 1 cut(s) 697
FaeI CATG 4 cut(s) 280, 364, 548, 560
FaiI YATR 6 cut(s) 77, 278, 362, 369, 546, 558
FatI CATG 4 cut(s) 276, 360, 544, 556
FauI CCCGC 5 cut(s) 108, 177, 519, 579, 738
FbaI TGATCA 1 cut(s) 648
Fnu4HI GCNGC 3 cut(s) 149, 357, 508
FokI GGATG 1 cut(s) 660
FriOI GRGCYC 2 cut(s) 9, 731
Fsp4HI GCNGC 3 cut(s) 149, 357, 508
FspBI CTAG 1 cut(s) 668
GlaI GCGC 1 cut(s) 132
GluI GCNGC 3 cut(s) 149, 357, 508
GsuI CTGGAG 1 cut(s) 10
HaeII RGCGCY 1 cut(s) 134
HaeIII GGCC 7 cut(s) 23, 189, 383, 484, 510, 565, 729
HapII CCGG 7 cut(s) 239, 320, 342, 404, 426, 524, 597
HhaI GCGC 1 cut(s) 133
Hin1II CATG 4 cut(s) 280, 364, 548, 560
Hin6I GCGC 1 cut(s) 131
HinP1I GCGC 1 cut(s) 131
HinfI GANTC 3 cut(s) 235, 242, 316
HpaII CCGG 7 cut(s) 239, 320, 342, 404, 426, 524, 597
HphI GGTGA 3 cut(s) 158, 167, 611
Hpy188I TCNGA 5 cut(s) 127, 142, 251, 295, 460
Hpy188III TCNNGA 6 cut(s) 27, 220, 239, 269, 313, 342
Hpy99I CGWCG 2 cut(s) 110, 665
HpyAV CCTTC 2 cut(s) 373, 499
HpyCH4III ACNGT 2 cut(s) 138, 454
HpyCH4IV ACGT 1 cut(s) 690
HpyCH4V TGCA 2 cut(s) 12, 263
HpyF10VI GCNNNNNNNGC 6 cut(s) 13, 154, 186, 211, 353, 571
HpyF3I CTNAG 2 cut(s) 117, 244
HpySE526I ACGT 1 cut(s) 690
Hsp92II CATG 4 cut(s) 280, 364, 548, 560
HspAI GCGC 1 cut(s) 131
Kpn2I TCCGGA 2 cut(s) 238, 341
Ksp22I TGATCA 1 cut(s) 648
Kzo9I GATC 3 cut(s) 142, 624, 648
LmnI GCTCC 5 cut(s) 4, 154, 219, 344, 356
LweI GCATC 1 cut(s) 682
MaeI CTAG 1 cut(s) 668
MaeII ACGT 1 cut(s) 690
MaeIII GTNAC 4 cut(s) 429, 448, 599, 735
MalI GATC 3 cut(s) 144, 626, 650
MbiI CCGCTC 1 cut(s) 103
MboI GATC 3 cut(s) 142, 624, 648
MboII GAAGA 2 cut(s) 48, 449
MhlI GDGCHC 2 cut(s) 9, 731
MlyI GAGTC 2 cut(s) 236, 244
MmeI TCCRAC 4 cut(s) 84, 274, 619, 720
MroI TCCGGA 2 cut(s) 238, 341
MseI TTAA 1 cut(s) 465
MspA1I CMGCKG 2 cut(s) 193, 733
MspI CCGG 7 cut(s) 239, 320, 342, 404, 426, 524, 597
MspR9I CCNGG 6 cut(s) 405, 426, 427, 516, 525, 597
MvaI CCWGG 1 cut(s) 516
MvnI CGCG 1 cut(s) 574
MwoI GCNNNNNNNGC 6 cut(s) 13, 154, 186, 211, 353, 571
NciI CCSGG 5 cut(s) 405, 426, 427, 525, 597
NcoI CCATGG 1 cut(s) 360
NdeII GATC 3 cut(s) 142, 624, 648
NlaIII CATG 4 cut(s) 280, 364, 548, 560
NlaIV GGNNCC 3 cut(s) 156, 585, 729
NmeAIII GCCGAG 1 cut(s) 183
NmuCI GTSAC 2 cut(s) 448, 599
PfeI GAWTC 1 cut(s) 316
PflFI GACNNNGTC 1 cut(s) 245
PflMI CCANNNNNTGG 1 cut(s) 557
PfoI TCCNGGA 1 cut(s) 523
PkrI GCNGC 3 cut(s) 150, 358, 509
PleI GAGTC 2 cut(s) 236, 243
PpsI GAGTC 2 cut(s) 236, 243
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 1 cut(s) 514
PspEI GGTNACC 1 cut(s) 429
PspGI CCWGG 1 cut(s) 514
PspN4I GGNNCC 3 cut(s) 156, 585, 729
PspOMI GGGCCC 1 cut(s) 727
PspPI GGNCC 8 cut(s) 382, 509, 521, 548, 563, 584, 727, 728
PsyI GACNNNGTC 1 cut(s) 245
PvuII CAGCTG 1 cut(s) 193
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 1 cut(s) 465
SatI GCNGC 3 cut(s) 149, 357, 508
Sau3AI GATC 3 cut(s) 142, 624, 648
Sau96I GGNCC 8 cut(s) 382, 509, 521, 548, 563, 584, 727, 728
SchI GAGTC 2 cut(s) 236, 244
ScrFI CCNGG 6 cut(s) 405, 426, 427, 516, 525, 597
SduI GDGCHC 2 cut(s) 9, 731
SfaNI GCATC 1 cut(s) 682
SinI GGWCC 3 cut(s) 521, 548, 584
SmaI CCCGGG 1 cut(s) 427
SmlI CTYRAG 1 cut(s) 206
SmoI CTYRAG 1 cut(s) 206
SspMI CTAG 1 cut(s) 668
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 6 cut(s) 403, 424, 425, 514, 523, 595
StyI CCWWGG 1 cut(s) 360
TaaI ACNGT 2 cut(s) 138, 454
TaiI ACGT 1 cut(s) 693
TaqI TCGA 6 cut(s) 108, 221, 270, 312, 627, 684
TauI GCSGC 3 cut(s) 151, 359, 510
TfiI GAWTC 1 cut(s) 316
Tru1I TTAA 1 cut(s) 465
Tru9I TTAA 1 cut(s) 465
TseFI GTSAC 2 cut(s) 448, 599
Tsp45I GTSAC 2 cut(s) 448, 599
TspGWI ACGGA 1 cut(s) 666
TspMI CCCGGG 1 cut(s) 425
Tth111I GACNNNGTC 1 cut(s) 245
Van91I CCANNNNNTGG 1 cut(s) 557
VpaK11BI GGWCC 3 cut(s) 521, 548, 584
XagI CCTNNNNNAGG 1 cut(s) 377
XmaI CCCGGG 1 cut(s) 425
XspI CTAG 1 cut(s) 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.