Rroxscaffold_4G00313440

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000465
Physical Location & Seq
Reverse (-)
36942601 .. 36944037
1437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00313440.1

Sequence Viewer

Length: 1437 bp
ATGCATGGAGCTCTGCAACCACCTCCTCTCCCGCCACTACCACACCACCATCGTCATTCCCTCCACTCTCTCCTCCGCCATCCCTTCCTCATTTTCCCAAAACCCACTCGCCCAGATCCTCCAACTCACCGCCTCTTCCGGCCCACCCAGACCCGGACCCGACCCGCTTCGCAATCAAGCCGCCCAAGACCTCGACAGCCACCTCGCCAACCGCCCAGCCACCGCCCCCGGCCTCTCTGCGCCGTGATCGACTTCCAGATGGGCTGGTCCAAGGAGGTCTTCTGGAAATTCGACGTCCCCGTCGTCGGATTCTTCACCTTCGGCGCCTGCGCCGCCGCCATGGAGTGGGGCTCGTGGAAGGTCCAAGCCGGCGACATCCGCCCCGACGAGATCCGCCCAATTCCCGGCCTACCCGAAGAAATGGCTCTCACTATTTCCGATCTCAAGCGTAAGGCCGGCGGTCCCGGCGGCCCACCACCTGGCGGTCCGAACGGTCCACATGGAGGTCCTGGCGGTCCGAACGGTCCACCTGGAGGTCCTGGCGGTCCGGGCGGTCCGGGTGGCCCGCCAGGCGGAGGAGGAAAAGGAGGAGGAGGAGGTCCGCCGAAACCGGGGAACCGGCCGCCGTGGGTCCCGGAGGTGGAAGGCTCGGTAGCGTTGATGTTCAACACGTGTGACTACCTGGAGCGTCCGTTCATCGACTACATGACGGAGCAGATGGGGATTCCGACGTGGGGAGTGGGCCCGCTCTTACCGGAATCATATTGGCAGTCGCCGTCGGATTCTTCAATCCGCCACCATCAGATCAGAGCTAAGCAGCGGCAATCGAACTACACCGAAGACGACGTCGTTAAGTGGCTTGACGGAAAGCCTCCCGGGTCGGTGTTGTACGTGGCGTTCGGAAGTGAAGTGGGTCCGACCGCGGAAGAGTATCCGGAGCTGGCTGCCGCATTGGAGGAGTCGACCGGGCCGTTCATCTGGGTCATCCAACCCGGGTCGGGTGGGTCCGACCCAGGCTACGGGTTGGAGAGCAAAGTGGGGGAGAGGGGTTTGATAATACGGGGATGGGCACCACAGCTGTTGATACTGAGCCACCCATCAACGGGTGGGTTCTTGTCACATTGTGGGTGGAACTCAACGGCGGAAGCGTTGGGCCGGGGAGTGCCGTTTTTGGGCTGGCCGGTTAGAGGTGATCAGTACTTCAATGCAAAATTGGTGGTGAACCATTTGAAGGTTGGTTACAGAGTTGCTGAGGATTTGTCGAAGATGGTTAGGAAGGAGGATGTTGTGAGAGGGATAGAGAAGCTGATGGGGGATGAGGAGATGAAGAAGAGGGCGTTGGCGATACGGCAGAAGTTTGAGAATGGGTTTCCGGCCAGCTCCGAGGCGGCATTGGATGCTTTTGGTGATTTTATTACCAGCCAAAAAGCAACTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

478

Amino Acids

51.63

Weight (kDa)

8.9

Isoelectric Point (pI)

52.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 295 - 448 9.3e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000465)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48790 AT5G48790 AT5G48790
fragaria_vesca FvH4_5g23760 FvH4_5g23760 FvH4_5g23770 FvH4_5g23771 FvH4_5g23790 FvH4_5g23800 FvH4_7g03421 FvH4_7g07510
malus_domestica MD00G1000600.v1.1 MD06G1013900.v1.1
prunus_persica Prupe.2G101800_v2.0.a1 Prupe.5G022600_v2.0.a1 Prupe.5G022700_v2.0.a1
pyrus_communis pycom07g06280 pycom16g25400
rosa_chinensis RchiOBHm_Chr1g0337881 RchiOBHm_Chr1g0339341 RchiOBHm_Chr7g0213081 RchiOBHm_Chr7g0213111 RchiOBHm_Chr7g0213141 RchiOBHm_Chr7g0213151 RchiOBHm_Chr7g0213161 RchiOBHm_Chr7g0213181
rosa_laevigata RLG00000002825 RLG00000002828 RLG00000002829 RLG00000002832 RLG00000029226
rosa_multiflora Rmu_co8345885.1_g000002 Rmu_co8348513.1_g000001 Rmu_co8456259.1_g000001 Rmu_sc0000613.1_g000002 Rmu_sc0001121.1_g000005 Rmu_sc0001121.1_g000006 Rmu_sc0002989.1_g000003 Rmu_sc0015110.1_g000001 Rmu_sc0030208.1_g000001 Rmu_sc0030209.1_g000001 Rmu_sc0032877.1_g000001 Rmu_sc0039394.1_g000001 Rmu_ssc0000084.1_g000002 Rmu_ssc0000084.1_g000007 Rmu_ssc0000084.1_g000009 Rmu_ssc0000084.1_g000012
rosa_roxburghii Rroxscaffold_3G00246200 Rroxscaffold_3G00246210 Rroxscaffold_3G00246240 Rroxscaffold_3G00246250 Rroxscaffold_4G00313440
rosa_rugosa Rorug01G0142600.1 Rorug07G0139400 Rorug07G0139500 Rorug07G0139600 Rorug07G0139700.1 Rorug07G0139800 Rorug07G0140100
rosa_samantha Rh1AG159300 Rh1BG126400 Rh1CG148500 Rh7AG270700 Rh7AG270800 Rh7AG271200 Rh7AG271400 Rh7AG271500 Rh7BG266400 Rh7BG266600 Rh7BG267000 Rh7BG267100 Rh7BG267200 Rh7BG267400 Rh7CG290000 Rh7CG290100 Rh7CG290600 Rh7CG290700 Rh7CG290800 Rh7DG278900 Rh7DG279200 Rh7DG279300 Rh7DG279400 Rh7DG279500 Rh7DG279600
rosa_wichuraiana Rw1G013550 Rw7G023520 Rw7G023530 Rw7G023540 Rw7G023550 Rw7G023560 Rw7G023580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 299
AatII GACGTC 2 cut(s) 297, 849
AccB1I GGYRCC 2 cut(s) 323, 1069
AccB7I CCANNNNNTGG 2 cut(s) 345, 479
AccBSI CCGCTC 1 cut(s) 748
AccI GTMKAC 1 cut(s) 962
AccII CGCG 1 cut(s) 923
AccIII TCCGGA 1 cut(s) 934
AclWI GGATC 2 cut(s) 110, 385
AcoI YGGCCR 3 cut(s) 620, 1178, 1374
AcsI RAATTY 1 cut(s) 287
AcvI CACGTG 1 cut(s) 672
AcyI GRCGYC 3 cut(s) 294, 324, 846
AdeI CACNNNGTG 1 cut(s) 1124
AfaI GTAC 2 cut(s) 890, 1199
AflIII ACRYGT 2 cut(s) 669, 671
AgsI TTSAA 4 cut(s) 667, 789, 1204, 1231
AjiI CACGTC 1 cut(s) 732
AjnI CCWGG 7 cut(s) 478, 508, 529, 538, 568, 681, 1012
AjuI GAANNNNNNNTTGG 4 cut(s) 263, 295, 1322, 1354
AloI GAACNNNNNNTCC 2 cut(s) 677, 709
AluBI AGCT 6 cut(s) 11, 812, 940, 1078, 1306, 1380
AluI AGCT 6 cut(s) 11, 812, 940, 1078, 1306, 1380
Alw21I GWGCWC 1 cut(s) 13
AlwI GGATC 2 cut(s) 110, 385
Ama87I CYCGRG 2 cut(s) 875, 992
Aor13HI TCCGGA 1 cut(s) 934
ApaI GGGCCC 1 cut(s) 746
ApeKI GCWGC 2 cut(s) 817, 944
ApoI RAATTY 1 cut(s) 287
ArsI GACNNNNNNTTYG 2 cut(s) 831, 863
AspLEI GCGC 3 cut(s) 242, 326, 332
AsuHPI GGTGA 5 cut(s) 119, 307, 1202, 1231, 1418
AvaI CYCGRG 2 cut(s) 875, 992
BaeGI GKGCMC 2 cut(s) 746, 1072
BanI GGYRCC 2 cut(s) 323, 1069
BanII GRGCYC 3 cut(s) 13, 353, 746
BarI GAAGNNNNNNTAC 2 cut(s) 1223, 1255
BauI CACGAG 1 cut(s) 352
BbrPI CACGTG 1 cut(s) 672
BbsI GAAGAC 2 cut(s) 271, 846
Bbv12I GWGCWC 1 cut(s) 13
BbvCI CCTCAGC 1 cut(s) 1251
BbvI GCAGC 2 cut(s) 829, 931
BccI CCATC 9 cut(s) 57, 87, 253, 712, 807, 1059, 1105, 1261, 1303
BceAI ACGGC 7 cut(s) 227, 610, 760, 955, 1150, 1155, 1364
BciT130I CCWGG 7 cut(s) 480, 510, 531, 540, 570, 683, 1014
BciVI GTATCC 1 cut(s) 942
BclI TGATCA 1 cut(s) 1192
BfoI RGCGCY 1 cut(s) 327
BfuI GTATCC 1 cut(s) 942
BglI GCCNNNNNGGC 1 cut(s) 570
BlpI GCTNAGC 1 cut(s) 813
BmcAI AGTACT 1 cut(s) 1199
BmeT110I CYCGRG 2 cut(s) 875, 992
BmgBI CACGTC 1 cut(s) 732
BmsI GCATC 1 cut(s) 1387
BpiI GAAGAC 2 cut(s) 271, 846
BplI GAGNNNNNCTC 2 cut(s) 335, 367
BpmI CTGGAG 2 cut(s) 552, 704
Bpu10I CCTNAGC 1 cut(s) 1251
Bpu1102I GCTNAGC 1 cut(s) 813
BpuEI CTTGAG 1 cut(s) 428
BsaAI YACGTR 2 cut(s) 672, 892
BsaHI GRCGYC 3 cut(s) 294, 324, 846
BsaWI WCCGGW 2 cut(s) 754, 934
BsaXI ACNNNNNCTCC 4 cut(s) 12, 42, 677, 707
Bse118I RCCGGY 4 cut(s) 368, 455, 618, 1180
BseAI TCCGGA 1 cut(s) 934
BseBI CCWGG 7 cut(s) 480, 510, 531, 540, 570, 683, 1014
BseGI GGATG 7 cut(s) 79, 375, 984, 1070, 1288, 1321, 1402
BseMII CTCAG 2 cut(s) 1079, 1242
BseRI GAGGAG 8 cut(s) 15, 62, 591, 603, 606, 609, 971, 1334
BseSI GKGCMC 2 cut(s) 746, 1072
BseX3I CGGCCG 1 cut(s) 620
BseXI GCAGC 2 cut(s) 829, 931
BseYI CCCAGC 1 cut(s) 215
Bsh1236I CGCG 1 cut(s) 923
Bsh1285I CGRYCG 3 cut(s) 623, 921, 966
BshNI GGYRCC 2 cut(s) 323, 1069
BsiEI CGRYCG 3 cut(s) 623, 921, 966
BsiHKAI GWGCWC 1 cut(s) 13
BsiHKCI CYCGRG 2 cut(s) 875, 992
BslFI GGGAC 3 cut(s) 281, 447, 617
BsmFI GGGAC 3 cut(s) 281, 447, 617
BsoBI CYCGRG 2 cut(s) 875, 992
Bsp120I GGGCCC 1 cut(s) 742
Bsp1286I GDGCHC 4 cut(s) 13, 353, 746, 1072
Bsp13I TCCGGA 1 cut(s) 934
Bsp143I GATC 6 cut(s) 115, 246, 390, 439, 804, 1192
Bsp1720I GCTNAGC 1 cut(s) 813
Bsp19I CCATGG 1 cut(s) 339
BspCNI CTCAG 2 cut(s) 1080, 1243
BspEI TCCGGA 1 cut(s) 934
BspFNI CGCG 1 cut(s) 923
BspPI GGATC 2 cut(s) 110, 385
BspT107I GGYRCC 2 cut(s) 323, 1069
BsrBI CCGCTC 1 cut(s) 748
BsrFI RCCGGY 4 cut(s) 368, 455, 618, 1180
BssAI RCCGGY 4 cut(s) 368, 455, 618, 1180
BssMI GATC 6 cut(s) 115, 246, 390, 439, 804, 1192
BssNI GRCGYC 3 cut(s) 294, 324, 846
BssSI CACGAG 1 cut(s) 352
BssT1I CCWWGG 2 cut(s) 270, 339
Bst2BI CACGAG 1 cut(s) 352
Bst2UI CCWGG 7 cut(s) 480, 510, 531, 540, 570, 683, 1014
Bst4CI ACNGT 2 cut(s) 494, 524
Bst6I CTCTTC 3 cut(s) 140, 921, 1325
BstACI GRCGYC 3 cut(s) 294, 324, 846
BstAPI GCANNNNNTGC 1 cut(s) 1397
BstBAI YACGTR 2 cut(s) 672, 892
BstC8I GCNNGC 8 cut(s) 328, 370, 457, 566, 746, 942, 1178, 1378
BstDEI CTNAG 3 cut(s) 813, 1088, 1251
BstDSI CCRYGG 3 cut(s) 339, 626, 921
BstF5I GGATG 7 cut(s) 79, 375, 984, 1070, 1288, 1321, 1402
BstFNI CGCG 1 cut(s) 923
BstH2I RGCGCY 1 cut(s) 327
BstHHI GCGC 3 cut(s) 242, 326, 332
BstKTI GATC 6 cut(s) 118, 249, 393, 442, 807, 1195
BstMBI GATC 6 cut(s) 115, 246, 390, 439, 804, 1192
BstMCI CGRYCG 3 cut(s) 623, 921, 966
BstMWI GCNNNNNNNGC 6 cut(s) 332, 378, 465, 549, 570, 1397
BstNI CCWGG 7 cut(s) 480, 510, 531, 540, 570, 683, 1014
BstSLI GKGCMC 2 cut(s) 746, 1072
BstUI CGCG 1 cut(s) 923
BstV1I GCAGC 2 cut(s) 829, 931
BstV2I GAAGAC 2 cut(s) 271, 846
BstX2I RGATCY 2 cut(s) 115, 390
BstYI RGATCY 2 cut(s) 115, 390
BstZI CGGCCG 1 cut(s) 620
BsuI GTATCC 1 cut(s) 942
BtgI CCRYGG 3 cut(s) 339, 626, 921
BtrI CACGTC 1 cut(s) 732
BtsCI GGATG 7 cut(s) 79, 375, 984, 1070, 1288, 1321, 1402
Cac8I GCNNGC 8 cut(s) 328, 370, 457, 566, 746, 942, 1178, 1378
CfoI GCGC 3 cut(s) 242, 326, 332
Cfr10I RCCGGY 4 cut(s) 368, 455, 618, 1180
Cfr42I CCGCGG 1 cut(s) 924
Cfr9I CCCGGG 2 cut(s) 875, 992
CpoI CGGWCCG 4 cut(s) 485, 515, 545, 554
CseI GACGC 1 cut(s) 677
Csp6I GTAC 2 cut(s) 889, 1198
CspCI CAANNNNNGTGG 4 cut(s) 1062, 1097, 1197, 1232
CspI CGGWCCG 4 cut(s) 485, 515, 545, 554
CviAII CATG 4 cut(s) 5, 340, 500, 706
CviQI GTAC 2 cut(s) 889, 1198
DdeI CTNAG 3 cut(s) 813, 1088, 1251
DinI GGCGCC 1 cut(s) 325
DpnI GATC 6 cut(s) 117, 248, 392, 441, 806, 1194
DpnII GATC 6 cut(s) 115, 246, 390, 439, 804, 1192
DraIII CACNNNGTG 1 cut(s) 1124
DrdI GACNNNNNNGTC 1 cut(s) 299
DseDI GACNNNNNNGTC 1 cut(s) 299
EaeI YGGCCR 3 cut(s) 620, 1178, 1374
EagI CGGCCG 1 cut(s) 620
Eam1104I CTCTTC 3 cut(s) 140, 921, 1325
EarI CTCTTC 3 cut(s) 140, 921, 1325
EciI GGCGGA 7 cut(s) 65, 368, 383, 588, 591, 782, 1157
Ecl136II GAGCTC 1 cut(s) 11
EclXI CGGCCG 1 cut(s) 620
Eco130I CCWWGG 2 cut(s) 270, 339
Eco24I GRGCYC 3 cut(s) 13, 353, 746
Eco52I CGGCCG 1 cut(s) 620
Eco53kI GAGCTC 1 cut(s) 11
Eco72I CACGTG 1 cut(s) 672
Eco88I CYCGRG 2 cut(s) 875, 992
EcoICRI GAGCTC 1 cut(s) 11
EcoO109I RGGNCCY 3 cut(s) 506, 536, 631
EcoRII CCWGG 7 cut(s) 478, 508, 529, 538, 568, 681, 1012
EcoT14I CCWWGG 2 cut(s) 270, 339
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 3 cut(s) 13, 353, 746
EgeI GGCGCC 1 cut(s) 325
EheI GGCGCC 1 cut(s) 325
ErhI CCWWGG 2 cut(s) 270, 339
FaeI CATG 4 cut(s) 8, 343, 503, 709
FaiI YATR 5 cut(s) 6, 341, 501, 707, 763
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FaqI GGGAC 3 cut(s) 281, 447, 617
FatI CATG 4 cut(s) 4, 339, 499, 705
FauI CCCGC 4 cut(s) 39, 172, 573, 753
FbaI TGATCA 1 cut(s) 1192
FblI GTMKAC 1 cut(s) 962
FokI GGATG 7 cut(s) 66, 362, 971, 1077, 1295, 1328, 1409
FriOI GRGCYC 3 cut(s) 13, 353, 746
GlaI GCGC 3 cut(s) 241, 325, 331
GsaI CCCAGC 1 cut(s) 219
GsuI CTGGAG 2 cut(s) 552, 704
HaeII RGCGCY 1 cut(s) 327
HgaI GACGC 1 cut(s) 677
HhaI GCGC 3 cut(s) 242, 326, 332
Hin1I GRCGYC 3 cut(s) 294, 324, 846
Hin1II CATG 4 cut(s) 8, 343, 503, 709
Hin6I GCGC 3 cut(s) 240, 324, 330
HinP1I GCGC 3 cut(s) 240, 324, 330
HincII GTYRAC 1 cut(s) 963
HindII GTYRAC 1 cut(s) 963
HinfI GANTC 5 cut(s) 309, 724, 758, 782, 959
HphI GGTGA 5 cut(s) 119, 307, 1202, 1231, 1418
Hpy166II GTNNAC 4 cut(s) 497, 527, 963, 1222
Hpy188III TCNNGA 3 cut(s) 256, 283, 935
Hpy8I GTNNAC 4 cut(s) 497, 527, 963, 1222
Hpy99I CGWCG 8 cut(s) 296, 305, 308, 389, 733, 781, 848, 851
HpyAV CCTTC 6 cut(s) 94, 328, 352, 638, 1225, 1270
HpyCH4III ACNGT 2 cut(s) 494, 524
HpyCH4IV ACGT 5 cut(s) 294, 671, 731, 846, 891
HpyCH4V TGCA 3 cut(s) 4, 16, 1208
HpyF10VI GCNNNNNNNGC 6 cut(s) 332, 378, 465, 549, 570, 1397
HpyF3I CTNAG 3 cut(s) 813, 1088, 1251
HpySE526I ACGT 5 cut(s) 294, 671, 731, 846, 891
Hsp92I GRCGYC 3 cut(s) 294, 324, 846
Hsp92II CATG 4 cut(s) 8, 343, 503, 709
HspAI GCGC 3 cut(s) 240, 324, 330
KasI GGCGCC 1 cut(s) 323
KflI GGGWCCC 1 cut(s) 631
Kpn2I TCCGGA 1 cut(s) 934
KroI GCCGGC 2 cut(s) 368, 455
KroNI GCCGGC 2 cut(s) 370, 457
Ksp22I TGATCA 1 cut(s) 1192
KspI CCGCGG 1 cut(s) 924
Kzo9I GATC 6 cut(s) 115, 246, 390, 439, 804, 1192
LmnI GCTCC 5 cut(s) 8, 685, 712, 937, 1385
Lsp1109I GCAGC 2 cut(s) 829, 931
LweI GCATC 1 cut(s) 1387
MaeII ACGT 5 cut(s) 294, 671, 731, 846, 891
MaeIII GTNAC 3 cut(s) 674, 1116, 1238
MalI GATC 6 cut(s) 117, 248, 392, 441, 806, 1194
MbiI CCGCTC 1 cut(s) 748
MboI GATC 6 cut(s) 115, 246, 390, 439, 804, 1192
MflI RGATCY 2 cut(s) 115, 390
MhlI GDGCHC 4 cut(s) 13, 353, 746, 1072
MluCI AATT 3 cut(s) 287, 399, 1211
Mly113I GGCGCC 1 cut(s) 324
MlyI GAGTC 1 cut(s) 968
MmeI TCCRAC 8 cut(s) 146, 286, 752, 759, 941, 1005, 1012, 1032
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 934
MroNI GCCGGC 2 cut(s) 368, 455
MseI TTAA 2 cut(s) 852, 1435
MspA1I CMGCKG 3 cut(s) 820, 923, 1078
MvaI CCWGG 7 cut(s) 480, 510, 531, 540, 570, 683, 1014
MvnI CGCG 1 cut(s) 923
MwoI GCNNNNNNNGC 6 cut(s) 332, 378, 465, 549, 570, 1397
NaeI GCCGGC 2 cut(s) 370, 457
NarI GGCGCC 1 cut(s) 324
NcoI CCATGG 1 cut(s) 339
NdeII GATC 6 cut(s) 115, 246, 390, 439, 804, 1192
NgoMIV GCCGGC 2 cut(s) 368, 455
NlaIII CATG 4 cut(s) 8, 343, 503, 709
NmuCI GTSAC 2 cut(s) 674, 1116
NsiI ATGCAT 1 cut(s) 6
PcsI WCGNNNNNNNCGW 4 cut(s) 297, 300, 968, 1145
PdiI GCCGGC 2 cut(s) 370, 457
PfeI GAWTC 4 cut(s) 309, 724, 758, 782
PflFI GACNNNGTC 1 cut(s) 845
PflMI CCANNNNNTGG 2 cut(s) 345, 479
PfoI TCCNGGA 1 cut(s) 633
PleI GAGTC 1 cut(s) 967
PluTI GGCGCC 1 cut(s) 327
PmaCI CACGTG 1 cut(s) 672
PmlI CACGTG 1 cut(s) 672
PpsI GAGTC 1 cut(s) 967
Ppu21I YACGTR 2 cut(s) 672, 892
PpuMI RGGWCCY 3 cut(s) 506, 536, 631
Psp124BI GAGCTC 1 cut(s) 13
Psp5II RGGWCCY 3 cut(s) 506, 536, 631
Psp6I CCWGG 7 cut(s) 478, 508, 529, 538, 568, 681, 1012
PspCI CACGTG 1 cut(s) 672
PspFI CCCAGC 1 cut(s) 215
PspGI CCWGG 7 cut(s) 478, 508, 529, 538, 568, 681, 1012
PspOMI GGGCCC 1 cut(s) 742
PspPPI RGGWCCY 3 cut(s) 506, 536, 631
PsrI GAACNNNNNNTAC 2 cut(s) 881, 913
PsuI RGATCY 2 cut(s) 115, 390
PsyI GACNNNGTC 1 cut(s) 845
PvuII CAGCTG 1 cut(s) 1078
RsaI GTAC 2 cut(s) 890, 1199
RsaNI GTAC 2 cut(s) 889, 1198
Rsr2I CGGWCCG 4 cut(s) 485, 515, 545, 554
RsrII CGGWCCG 4 cut(s) 485, 515, 545, 554
SacI GAGCTC 1 cut(s) 13
SacII CCGCGG 1 cut(s) 924
SalI GTCGAC 1 cut(s) 961
SaqAI TTAA 2 cut(s) 852, 1435
Sau3AI GATC 6 cut(s) 115, 246, 390, 439, 804, 1192
ScaI AGTACT 1 cut(s) 1199
SchI GAGTC 1 cut(s) 968
SduI GDGCHC 4 cut(s) 13, 353, 746, 1072
SfaNI GCATC 1 cut(s) 1387
SfoI GGCGCC 1 cut(s) 325
Sfr303I CCGCGG 1 cut(s) 924
SgrBI CCGCGG 1 cut(s) 924
SmaI CCCGGG 2 cut(s) 877, 994
SmlI CTYRAG 1 cut(s) 443
SmoI CTYRAG 1 cut(s) 443
Sse9I AATT 3 cut(s) 287, 399, 1211
SspDI GGCGCC 1 cut(s) 323
SstI GAGCTC 1 cut(s) 13
StyI CCWWGG 2 cut(s) 270, 339
TaaI ACNGT 2 cut(s) 494, 524
TaiI ACGT 5 cut(s) 297, 674, 734, 849, 894
TaqI TCGA 7 cut(s) 193, 249, 291, 699, 827, 962, 1262
TasI AATT 3 cut(s) 287, 399, 1211
TatI WGTACW 1 cut(s) 1197
TauI GCSGC 8 cut(s) 183, 335, 338, 471, 625, 823, 950, 1391
TfiI GAWTC 4 cut(s) 309, 724, 758, 782
Tru1I TTAA 2 cut(s) 852, 1435
Tru9I TTAA 2 cut(s) 852, 1435
TseFI GTSAC 2 cut(s) 674, 1116
TseI GCWGC 2 cut(s) 817, 944
Tsp45I GTSAC 2 cut(s) 674, 1116
TspDTI ATGAA 3 cut(s) 685, 964, 1340
TspGWI ACGGA 3 cut(s) 681, 725, 879
TspMI CCCGGG 2 cut(s) 875, 992
Tth111I GACNNNGTC 1 cut(s) 845
Van91I CCANNNNNTGG 2 cut(s) 345, 479
XapI RAATTY 1 cut(s) 287
XcmI CCANNNNNNNNNTGG 1 cut(s) 1232
XmaI CCCGGG 2 cut(s) 875, 992
XmiI GTMKAC 1 cut(s) 962
ZraI GACGTC 2 cut(s) 295, 847
ZrmI AGTACT 1 cut(s) 1199
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.