Rh7BG267100

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000465
Physical Location & Seq
Forward (+)
24490626 .. 24491241
616 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG267100.1

Sequence Viewer

Length: 570 bp
ATGGAGCTCTGCAAGCACTTGGCCTCCAGAAACTTCAAAGCTGTTTTAGTTATCTCTTCCGAATTCTCCTCCTCCATACCCTCATCTCTCCGCCAATACCCACTCGTCGAAATCGCTGAAATTTCTGAAGCAGCAGCACCACCGTCTGATTCGTCTTCTCCACCGCAGGAGCCGAGTTCTCAGCCGCTTCACAAACACCACGCACGCTACAGCCAGATAGCAGTCGGGCTTGACAAACTCCTCCATGATCCGGATTCAGTCCGACGTCGACCCCTTTGTGCCGTTGTTGACATGATGATGAGCTGGACTTCCGAGATTTTTAACAGATACGAAATTCCGGCTGTCAACTTCTTCACCTCCGGTGCTTGCTCTGCCGCCATGGACTATGCCATGTGGAAGAGCCACCCGTTGGATGATGTCAAAGCTGGTGAGACCCGTTTACCATCCGGTCTCGTGACGGCCCACAAAGAGGCTCGAGTGAAGGATTTCCTCCTCTTCAGCCACCTCGAACTAAGTTTGGGCCGCAGAGACATCACCCAGCCTACCCCGGTGACAAACCACCGTGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

189

Amino Acids

21.0

Weight (kDa)

6.75

Isoelectric Point (pI)

56.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000465)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48790 AT5G48790 AT5G48790
fragaria_vesca FvH4_5g23760 FvH4_5g23760 FvH4_5g23770 FvH4_5g23771 FvH4_5g23790 FvH4_5g23800 FvH4_7g03421 FvH4_7g07510
malus_domestica MD00G1000600.v1.1 MD06G1013900.v1.1
prunus_persica Prupe.2G101800_v2.0.a1 Prupe.5G022600_v2.0.a1 Prupe.5G022700_v2.0.a1
pyrus_communis pycom07g06280 pycom16g25400
rosa_chinensis RchiOBHm_Chr1g0337881 RchiOBHm_Chr1g0339341 RchiOBHm_Chr7g0213081 RchiOBHm_Chr7g0213111 RchiOBHm_Chr7g0213141 RchiOBHm_Chr7g0213151 RchiOBHm_Chr7g0213161 RchiOBHm_Chr7g0213181
rosa_laevigata RLG00000002825 RLG00000002828 RLG00000002829 RLG00000002832 RLG00000029226
rosa_multiflora Rmu_co8345885.1_g000002 Rmu_co8348513.1_g000001 Rmu_co8456259.1_g000001 Rmu_sc0000613.1_g000002 Rmu_sc0001121.1_g000005 Rmu_sc0001121.1_g000006 Rmu_sc0002989.1_g000003 Rmu_sc0015110.1_g000001 Rmu_sc0030208.1_g000001 Rmu_sc0030209.1_g000001 Rmu_sc0032877.1_g000001 Rmu_sc0039394.1_g000001 Rmu_ssc0000084.1_g000002 Rmu_ssc0000084.1_g000007 Rmu_ssc0000084.1_g000009 Rmu_ssc0000084.1_g000012
rosa_roxburghii Rroxscaffold_3G00246200 Rroxscaffold_3G00246210 Rroxscaffold_3G00246240 Rroxscaffold_3G00246250 Rroxscaffold_4G00313440
rosa_rugosa Rorug01G0142600.1 Rorug07G0139400 Rorug07G0139500 Rorug07G0139600 Rorug07G0139700.1 Rorug07G0139800 Rorug07G0140100
rosa_samantha Rh1AG159300 Rh1BG126400 Rh1CG148500 Rh7AG270700 Rh7AG270800 Rh7AG271200 Rh7AG271400 Rh7AG271500 Rh7BG266400 Rh7BG266600 Rh7BG267000 Rh7BG267100 Rh7BG267200 Rh7BG267400 Rh7CG290000 Rh7CG290100 Rh7CG290600 Rh7CG290700 Rh7CG290800 Rh7DG278900 Rh7DG279200 Rh7DG279300 Rh7DG279400 Rh7DG279500 Rh7DG279600
rosa_wichuraiana Rw1G013550 Rw7G023520 Rw7G023530 Rw7G023540 Rw7G023550 Rw7G023560 Rw7G023580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 268
AccB7I CCANNNNNTGG 1 cut(s) 409
AccI GTMKAC 1 cut(s) 268
AccIII TCCGGA 1 cut(s) 250
AciI CCGC 5 cut(s) 91, 164, 185, 375, 523
AclWI GGATC 1 cut(s) 242
AcsI RAATTY 3 cut(s) 62, 120, 333
AcuI CTGAAG 2 cut(s) 147, 481
AcyI GRCGYC 1 cut(s) 265
AfiI CCNNNNNNNGG 3 cut(s) 250, 409, 469
AgsI TTSAA 1 cut(s) 37
AluBI AGCT 4 cut(s) 7, 41, 303, 425
AluI AGCT 4 cut(s) 7, 41, 303, 425
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 3 cut(s) 425, 455, 522
AlwI GGATC 1 cut(s) 242
Ama87I CYCGRG 1 cut(s) 474
Aor13HI TCCGGA 1 cut(s) 250
AoxI GGCC 3 cut(s) 21, 459, 520
ApeKI GCWGC 2 cut(s) 131, 134
ApoI RAATTY 3 cut(s) 62, 120, 333
Asp700I GAANNNNTTC 1 cut(s) 485
AspS9I GGNCC 2 cut(s) 460, 520
AsuC2I CCSGG 1 cut(s) 548
AsuHPI GGTGA 4 cut(s) 346, 440, 526, 562
AvaI CYCGRG 1 cut(s) 474
BanII GRGCYC 1 cut(s) 9
BauI CACGAG 1 cut(s) 452
BbsI GAAGAC 1 cut(s) 147
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 2 cut(s) 143, 146
BccI CCATC 1 cut(s) 451
BceAI ACGGC 2 cut(s) 266, 474
BcnI CCSGG 1 cut(s) 548
BcoDI GTCTC 3 cut(s) 425, 455, 522
BfmI CTRYAG 1 cut(s) 208
BisI GCNGC 5 cut(s) 132, 135, 185, 375, 523
BlsI GCNGC 5 cut(s) 133, 136, 186, 376, 524
Bme1390I CCNGG 1 cut(s) 548
BmeT110I CYCGRG 1 cut(s) 474
BmgT120I GGNCC 2 cut(s) 460, 520
BmiI GGNNCC 1 cut(s) 171
BmrFI CCNGG 1 cut(s) 548
BpiI GAAGAC 1 cut(s) 147
BpmI CTGGAG 1 cut(s) 10
BpuMI CCSGG 1 cut(s) 548
BsaHI GRCGYC 1 cut(s) 265
BsaI GGTCTC 2 cut(s) 425, 455
BsaJI CCNNGG 3 cut(s) 378, 546, 562
BsaWI WCCGGW 3 cut(s) 250, 359, 446
BsaXI ACNNNNNCTCC 2 cut(s) 8, 38
Bsc4I CCNNNNNNNGG 3 cut(s) 250, 409, 469
BseAI TCCGGA 1 cut(s) 250
BseDI CCNNGG 3 cut(s) 378, 546, 562
BseGI GGATG 2 cut(s) 418, 443
BseLI CCNNNNNNNGG 3 cut(s) 250, 409, 469
BseMII CTCAG 1 cut(s) 194
BseRI GAGGAG 4 cut(s) 58, 61, 230, 482
BseXI GCAGC 2 cut(s) 143, 146
BseYI CCCAGC 1 cut(s) 537
BshFI GGCC 3 cut(s) 23, 461, 522
BsiHKAI GWGCWC 1 cut(s) 9
BsiHKCI CYCGRG 1 cut(s) 474
BsiSI CCGG 5 cut(s) 251, 338, 360, 447, 548
BslI CCNNNNNNNGG 3 cut(s) 250, 409, 469
BsmAI GTCTC 3 cut(s) 425, 455, 522
BsnI GGCC 3 cut(s) 23, 461, 522
Bso31I GGTCTC 2 cut(s) 425, 455
BsoBI CYCGRG 1 cut(s) 474
Bsp1286I GDGCHC 1 cut(s) 9
Bsp13I TCCGGA 1 cut(s) 250
Bsp143I GATC 1 cut(s) 247
Bsp19I CCATGG 1 cut(s) 378
BspACI CCGC 5 cut(s) 91, 164, 185, 375, 523
BspANI GGCC 3 cut(s) 23, 461, 522
BspCNI CTCAG 1 cut(s) 193
BspEI TCCGGA 1 cut(s) 250
BspLI GGNNCC 1 cut(s) 171
BspPI GGATC 1 cut(s) 242
BspQI GCTCTTC 1 cut(s) 392
BspTNI GGTCTC 2 cut(s) 425, 455
BssECI CCNNGG 3 cut(s) 378, 546, 562
BssMI GATC 1 cut(s) 247
BssNI GRCGYC 1 cut(s) 265
BssSI CACGAG 1 cut(s) 452
BssT1I CCWWGG 1 cut(s) 378
Bst2BI CACGAG 1 cut(s) 452
Bst4CI ACNGT 2 cut(s) 144, 563
Bst6I CTCTTC 3 cut(s) 61, 392, 500
BstACI GRCGYC 1 cut(s) 265
BstC8I GCNNGC 3 cut(s) 14, 205, 367
BstDEI CTNAG 2 cut(s) 180, 512
BstDSI CCRYGG 2 cut(s) 378, 562
BstF5I GGATG 2 cut(s) 418, 443
BstKTI GATC 1 cut(s) 250
BstMAI GTCTC 3 cut(s) 425, 455, 522
BstMBI GATC 1 cut(s) 247
BstMWI GCNNNNNNNGC 2 cut(s) 13, 371
BstSCI CCNGG 1 cut(s) 546
BstSFI CTRYAG 1 cut(s) 208
BstV1I GCAGC 2 cut(s) 143, 146
BstV2I GAAGAC 1 cut(s) 147
BsuRI GGCC 3 cut(s) 23, 461, 522
BtgI CCRYGG 2 cut(s) 378, 562
BtsCI GGATG 2 cut(s) 418, 443
Cac8I GCNNGC 3 cut(s) 14, 205, 367
Cfr13I GGNCC 2 cut(s) 460, 520
CviAII CATG 4 cut(s) 245, 292, 379, 391
DdeI CTNAG 2 cut(s) 180, 512
DpnI GATC 1 cut(s) 249
DpnII GATC 1 cut(s) 247
Eam1104I CTCTTC 3 cut(s) 61, 392, 500
EarI CTCTTC 3 cut(s) 61, 392, 500
EciI GGCGGA 1 cut(s) 80
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 378
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 2 cut(s) 425, 455
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 2 cut(s) 147, 481
Eco88I CYCGRG 1 cut(s) 474
EcoICRI GAGCTC 1 cut(s) 7
EcoRI GAATTC 1 cut(s) 62
EcoT14I CCWWGG 1 cut(s) 378
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 378
FaeI CATG 4 cut(s) 248, 295, 382, 394
FaiI YATR 6 cut(s) 77, 246, 293, 380, 387, 392
FatI CATG 4 cut(s) 244, 291, 378, 390
FblI GTMKAC 1 cut(s) 268
Fnu4HI GCNGC 5 cut(s) 132, 135, 185, 375, 523
FokI GGATG 2 cut(s) 425, 430
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 5 cut(s) 132, 135, 185, 375, 523
GluI GCNGC 5 cut(s) 132, 135, 185, 375, 523
GsaI CCCAGC 1 cut(s) 541
GsuI CTGGAG 1 cut(s) 10
HaeIII GGCC 3 cut(s) 23, 461, 522
HapII CCGG 5 cut(s) 251, 338, 360, 447, 548
Hin1I GRCGYC 1 cut(s) 265
Hin1II CATG 4 cut(s) 248, 295, 382, 394
HincII GTYRAC 3 cut(s) 269, 289, 346
HindII GTYRAC 3 cut(s) 269, 289, 346
HinfI GANTC 2 cut(s) 149, 254
HpaII CCGG 5 cut(s) 251, 338, 360, 447, 548
HphI GGTGA 4 cut(s) 346, 440, 526, 562
Hpy166II GTNNAC 4 cut(s) 269, 289, 346, 440
Hpy188I TCNGA 5 cut(s) 61, 127, 148, 263, 313
Hpy188III TCNNGA 3 cut(s) 27, 251, 454
Hpy8I GTNNAC 4 cut(s) 269, 289, 346, 440
Hpy99I CGWCG 3 cut(s) 110, 267, 270
HpyAV CCTTC 1 cut(s) 475
HpyCH4III ACNGT 2 cut(s) 144, 563
HpyCH4IV ACGT 1 cut(s) 265
HpyCH4V TGCA 1 cut(s) 12
HpyF10VI GCNNNNNNNGC 2 cut(s) 13, 371
HpyF3I CTNAG 2 cut(s) 180, 512
HpySE526I ACGT 1 cut(s) 265
Hsp92I GRCGYC 1 cut(s) 265
Hsp92II CATG 4 cut(s) 248, 295, 382, 394
Kpn2I TCCGGA 1 cut(s) 250
Kzo9I GATC 1 cut(s) 247
LguI GCTCTTC 1 cut(s) 392
LmnI GCTCC 2 cut(s) 4, 169
Lsp1109I GCAGC 2 cut(s) 143, 146
MaeII ACGT 1 cut(s) 265
MaeIII GTNAC 2 cut(s) 454, 550
MalI GATC 1 cut(s) 249
MboI GATC 1 cut(s) 247
MboII GAAGA 5 cut(s) 48, 147, 343, 409, 487
MhlI GDGCHC 1 cut(s) 9
MluCI AATT 3 cut(s) 62, 120, 333
MmeI TCCRAC 2 cut(s) 286, 390
MroI TCCGGA 1 cut(s) 250
MroXI GAANNNNTTC 1 cut(s) 485
MseI TTAA 1 cut(s) 321
MslI CAYNNNNRTG 1 cut(s) 296
MspI CCGG 5 cut(s) 251, 338, 360, 447, 548
MspR9I CCNGG 1 cut(s) 548
MwoI GCNNNNNNNGC 2 cut(s) 13, 371
NciI CCSGG 1 cut(s) 548
NcoI CCATGG 1 cut(s) 378
NdeII GATC 1 cut(s) 247
NlaIII CATG 4 cut(s) 248, 295, 382, 394
NlaIV GGNNCC 1 cut(s) 171
NmeAIII GCCGAG 1 cut(s) 198
NmuCI GTSAC 2 cut(s) 454, 550
PaeR7I CTCGAG 1 cut(s) 474
PciSI GCTCTTC 1 cut(s) 392
PdmI GAANNNNTTC 1 cut(s) 485
PfeI GAWTC 2 cut(s) 149, 254
PflMI CCANNNNNTGG 1 cut(s) 409
PkrI GCNGC 5 cut(s) 133, 136, 186, 376, 524
Psp124BI GAGCTC 1 cut(s) 9
PspFI CCCAGC 1 cut(s) 537
PspN4I GGNNCC 1 cut(s) 171
PspPI GGNCC 2 cut(s) 460, 520
PspXI VCTCGAGB 1 cut(s) 474
RseI CAYNNNNRTG 1 cut(s) 296
SacI GAGCTC 1 cut(s) 9
SalI GTCGAC 1 cut(s) 267
SapI GCTCTTC 1 cut(s) 392
SaqAI TTAA 1 cut(s) 321
SatI GCNGC 5 cut(s) 132, 135, 185, 375, 523
Sau3AI GATC 1 cut(s) 247
Sau96I GGNCC 2 cut(s) 460, 520
ScrFI CCNGG 1 cut(s) 548
SduI GDGCHC 1 cut(s) 9
SetI ASST 7 cut(s) 9, 43, 268, 305, 359, 427, 507
SfcI CTRYAG 1 cut(s) 208
Sfr274I CTCGAG 1 cut(s) 474
SlaI CTCGAG 1 cut(s) 474
SmiMI CAYNNNNRTG 1 cut(s) 296
SmlI CTYRAG 1 cut(s) 474
SmoI CTYRAG 1 cut(s) 474
Sse9I AATT 3 cut(s) 62, 120, 333
SsiI CCGC 5 cut(s) 91, 164, 185, 375, 523
SstI GAGCTC 1 cut(s) 9
StyD4I CCNGG 1 cut(s) 546
StyI CCWWGG 1 cut(s) 378
TaaI ACNGT 2 cut(s) 144, 563
TaiI ACGT 1 cut(s) 268
TaqI TCGA 4 cut(s) 108, 268, 475, 507
TasI AATT 3 cut(s) 62, 120, 333
TauI GCSGC 3 cut(s) 187, 377, 525
TfiI GAWTC 2 cut(s) 149, 254
Tru1I TTAA 1 cut(s) 321
Tru9I TTAA 1 cut(s) 321
TseFI GTSAC 2 cut(s) 454, 550
TseI GCWGC 2 cut(s) 131, 134
Tsp45I GTSAC 2 cut(s) 454, 550
Van91I CCANNNNNTGG 1 cut(s) 409
XapI RAATTY 3 cut(s) 62, 120, 333
XhoI CTCGAG 1 cut(s) 474
XmiI GTMKAC 1 cut(s) 268
XmnI GAANNNNTTC 1 cut(s) 485
ZraI GACGTC 1 cut(s) 266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.