Rmu_sc0032877.1_g000001

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032877.1
OG0000465
Physical Location & Seq
Forward (+)
81 .. 920
840 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032877.1_g000001.1.cds

Sequence Viewer

Length: 840 bp
atgggagtcttgatcaacacgtgcaacgatctggagtatccattcatcgagtacgtctccaataacatcggaaaaccagtttggggcgtgggcccgctcttgcccgagcaatattggaaatcggccggttcggttttccacgaccacaaaattcgaaccaatcggaaatcaaatgtcaccgaagaagaggtaaatgtgtggctagatacgaaaccacatggttcggtgttgtacatttcatttggaactgtggggggtcctgctaaggaggagtacgagatactagccaaggcgttggaagcgtcaacccggccattcatatgggtggtccaaaccaatgcaggcctctcgcggggtcctcccggccctccacagtccggttcagaccctgaagaggcttattttccgcacaagctgaatgatcgcgtcggaaaaagaggcttgatcatacacgggtgggcgccacagctcttgattctaagtcatccatcaacaggaggattcttatcgcactgtgggtggaattctactgtggaggcaattggtcgtggagttccattcttggcgtggccaattagaggggatcaatactcggacgctaaattggtagcaagctatctcaaagttgggtatctgatttctgaggatttctcacagacaataaaggaggaggatataacgagaggaattgagaagctactgagtgatgaagacatgaagcaacgagctgtgaagctaagtgctaagtttaagcatggttttccaacaagttctgaggctgctttagatgcttttggggacttcattagacagaaaggcaaagcaacttcagctcattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

279

Amino Acids

30.79

Weight (kDa)

6.51

Isoelectric Point (pI)

35.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000465)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48790 AT5G48790 AT5G48790
fragaria_vesca FvH4_5g23760 FvH4_5g23760 FvH4_5g23770 FvH4_5g23771 FvH4_5g23790 FvH4_5g23800 FvH4_7g03421 FvH4_7g07510
malus_domestica MD00G1000600.v1.1 MD06G1013900.v1.1
prunus_persica Prupe.2G101800_v2.0.a1 Prupe.5G022600_v2.0.a1 Prupe.5G022700_v2.0.a1
pyrus_communis pycom07g06280 pycom16g25400
rosa_chinensis RchiOBHm_Chr1g0337881 RchiOBHm_Chr1g0339341 RchiOBHm_Chr7g0213081 RchiOBHm_Chr7g0213111 RchiOBHm_Chr7g0213141 RchiOBHm_Chr7g0213151 RchiOBHm_Chr7g0213161 RchiOBHm_Chr7g0213181
rosa_laevigata RLG00000002825 RLG00000002828 RLG00000002829 RLG00000002832 RLG00000029226
rosa_multiflora Rmu_co8345885.1_g000002 Rmu_co8348513.1_g000001 Rmu_co8456259.1_g000001 Rmu_sc0000613.1_g000002 Rmu_sc0001121.1_g000005 Rmu_sc0001121.1_g000006 Rmu_sc0002989.1_g000003 Rmu_sc0015110.1_g000001 Rmu_sc0030208.1_g000001 Rmu_sc0030209.1_g000001 Rmu_sc0032877.1_g000001 Rmu_sc0039394.1_g000001 Rmu_ssc0000084.1_g000002 Rmu_ssc0000084.1_g000007 Rmu_ssc0000084.1_g000009 Rmu_ssc0000084.1_g000012
rosa_roxburghii Rroxscaffold_3G00246200 Rroxscaffold_3G00246210 Rroxscaffold_3G00246240 Rroxscaffold_3G00246250 Rroxscaffold_4G00313440
rosa_rugosa Rorug01G0142600.1 Rorug07G0139400 Rorug07G0139500 Rorug07G0139600 Rorug07G0139700.1 Rorug07G0139800 Rorug07G0140100
rosa_samantha Rh1AG159300 Rh1BG126400 Rh1CG148500 Rh7AG270700 Rh7AG270800 Rh7AG271200 Rh7AG271400 Rh7AG271500 Rh7BG266400 Rh7BG266600 Rh7BG267000 Rh7BG267100 Rh7BG267200 Rh7BG267400 Rh7CG290000 Rh7CG290100 Rh7CG290600 Rh7CG290700 Rh7CG290800 Rh7DG278900 Rh7DG279200 Rh7DG279300 Rh7DG279400 Rh7DG279500 Rh7DG279600
rosa_wichuraiana Rw1G013550 Rw7G023520 Rw7G023530 Rw7G023540 Rw7G023550 Rw7G023560 Rw7G023580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 460
AccBSI CCGCTC 1 cut(s) 97
AccII CGCG 2 cut(s) 352, 426
AciI CCGC 3 cut(s) 95, 352, 407
AclWI GGATC 1 cut(s) 591
AcoI YGGCCR 3 cut(s) 123, 311, 569
AcsI RAATTY 2 cut(s) 150, 523
AcuI CTGAAG 2 cut(s) 411, 813
AcvI CACGTG 1 cut(s) 21
AcyI GRCGYC 1 cut(s) 461
AfaI GTAC 3 cut(s) 53, 233, 275
AfiI CCNNNNNNNGG 6 cut(s) 83, 352, 377, 394, 494, 578
AflIII ACRYGT 1 cut(s) 18
AjuI GAANNNNNNNTTGG 2 cut(s) 64, 96
AluBI AGCT 7 cut(s) 415, 469, 615, 697, 728, 736, 833
AluI AGCT 7 cut(s) 415, 469, 615, 697, 728, 736, 833
Alw26I GTCTC 1 cut(s) 61
AlwI GGATC 1 cut(s) 591
AlwNI CAGNNNCTG 1 cut(s) 389
Ama87I CYCGRG 1 cut(s) 104
AoxI GGCC 6 cut(s) 91, 123, 311, 343, 364, 569
ApaI GGGCCC 1 cut(s) 95
ApeKI GCWGC 1 cut(s) 779
ApoI RAATTY 2 cut(s) 150, 523
AspLEI GCGC 1 cut(s) 463
AspS9I GGNCC 6 cut(s) 91, 92, 257, 328, 356, 365
AsuC2I CCSGG 2 cut(s) 310, 363
AsuHPI GGTGA 1 cut(s) 169
AsuII TTCGAA 1 cut(s) 154
AvaI CYCGRG 1 cut(s) 104
AvaII GGWCC 3 cut(s) 257, 328, 356
BaeGI GKGCMC 1 cut(s) 95
BalI TGGCCA 1 cut(s) 571
BanI GGYRCC 1 cut(s) 460
BanII GRGCYC 1 cut(s) 95
BbrPI CACGTG 1 cut(s) 21
BbsI GAAGAC 1 cut(s) 717
BbvI GCAGC 1 cut(s) 766
BccI CCATC 1 cut(s) 496
BcgI CGANNNNNNTGC 2 cut(s) 330, 364
BciVI GTATCC 1 cut(s) 48
BclI TGATCA 2 cut(s) 12, 444
BcnI CCSGG 2 cut(s) 310, 363
BcoDI GTCTC 1 cut(s) 61
BfaI CTAG 2 cut(s) 203, 284
BfoI RGCGCY 1 cut(s) 464
BfuI GTATCC 1 cut(s) 48
BisI GCNGC 1 cut(s) 780
BlsI GCNGC 1 cut(s) 781
Bme1390I CCNGG 2 cut(s) 310, 363
Bme18I GGWCC 3 cut(s) 257, 328, 356
BmeT110I CYCGRG 1 cut(s) 104
BmgT120I GGNCC 6 cut(s) 91, 92, 257, 328, 356, 365
BmiI GGNNCC 4 cut(s) 93, 258, 357, 462
BmrFI CCNGG 2 cut(s) 310, 363
BmsI GCATC 1 cut(s) 778
BpiI GAAGAC 1 cut(s) 717
BplI GAGNNNNNCTC 4 cut(s) 41, 73, 635, 667
BpmI CTGGAG 1 cut(s) 53
Bpu10I CCTNAGC 1 cut(s) 264
Bpu14I TTCGAA 1 cut(s) 154
BpuMI CCSGG 2 cut(s) 310, 363
BsaAI YACGTR 1 cut(s) 21
BsaBI GATNNNNATC 1 cut(s) 505
BsaHI GRCGYC 1 cut(s) 461
BsaJI CCNNGG 1 cut(s) 288
BsaWI WCCGGW 1 cut(s) 377
Bsc4I CCNNNNNNNGG 6 cut(s) 83, 352, 377, 394, 494, 578
Bse118I RCCGGY 1 cut(s) 125
Bse1I ACTGG 1 cut(s) 77
Bse8I GATNNNNATC 1 cut(s) 505
BseDI CCNNGG 1 cut(s) 288
BseGI GGATG 1 cut(s) 484
BseJI GATNNNNATC 1 cut(s) 505
BseLI CCNNNNNNNGG 6 cut(s) 83, 352, 377, 394, 494, 578
BseMII CTCAG 3 cut(s) 633, 692, 765
BseNI ACTGG 1 cut(s) 77
BseRI GAGGAG 2 cut(s) 284, 683
BseSI GKGCMC 1 cut(s) 95
BseX3I CGGCCG 1 cut(s) 123
BseXI GCAGC 1 cut(s) 766
Bsh1236I CGCG 2 cut(s) 352, 426
Bsh1285I CGRYCG 1 cut(s) 126
BshFI GGCC 6 cut(s) 93, 125, 313, 345, 366, 571
BshNI GGYRCC 1 cut(s) 460
BsiEI CGRYCG 1 cut(s) 126
BsiHKCI CYCGRG 1 cut(s) 104
BsiSI CCGG 4 cut(s) 126, 310, 363, 378
BslFI GGGAC 1 cut(s) 812
BslI CCNNNNNNNGG 6 cut(s) 83, 352, 377, 394, 494, 578
BsmAI GTCTC 1 cut(s) 61
BsmBI CGTCTC 1 cut(s) 61
BsmFI GGGAC 1 cut(s) 812
BsnI GGCC 6 cut(s) 93, 125, 313, 345, 366, 571
BsoBI CYCGRG 1 cut(s) 104
Bsp119I TTCGAA 1 cut(s) 154
Bsp120I GGGCCC 1 cut(s) 91
Bsp1286I GDGCHC 1 cut(s) 95
Bsp1407I TGTACA 1 cut(s) 231
Bsp143I GATC 5 cut(s) 12, 28, 421, 444, 583
BspACI CCGC 3 cut(s) 95, 352, 407
BspANI GGCC 6 cut(s) 93, 125, 313, 345, 366, 571
BspCNI CTCAG 3 cut(s) 634, 693, 766
BspFNI CGCG 2 cut(s) 352, 426
BspLI GGNNCC 4 cut(s) 93, 258, 357, 462
BspPI GGATC 1 cut(s) 591
BspT104I TTCGAA 1 cut(s) 154
BspT107I GGYRCC 1 cut(s) 460
BsrBI CCGCTC 1 cut(s) 97
BsrFI RCCGGY 1 cut(s) 125
BsrGI TGTACA 1 cut(s) 231
BsrI ACTGG 1 cut(s) 77
BssAI RCCGGY 1 cut(s) 125
BssECI CCNNGG 1 cut(s) 288
BssMI GATC 5 cut(s) 12, 28, 421, 444, 583
BssNI GRCGYC 1 cut(s) 461
BssT1I CCWWGG 1 cut(s) 288
Bst4CI ACNGT 4 cut(s) 250, 375, 515, 532
Bst6I CTCTTC 2 cut(s) 180, 387
BstACI GRCGYC 1 cut(s) 461
BstAUI TGTACA 1 cut(s) 231
BstBAI YACGTR 1 cut(s) 21
BstBI TTCGAA 1 cut(s) 154
BstC8I GCNNGC 3 cut(s) 95, 343, 613
BstDEI CTNAG 7 cut(s) 264, 479, 642, 701, 737, 744, 774
BstF5I GGATG 1 cut(s) 484
BstFNI CGCG 2 cut(s) 352, 426
BstH2I RGCGCY 1 cut(s) 464
BstHHI GCGC 1 cut(s) 463
BstKTI GATC 5 cut(s) 15, 31, 424, 447, 586
BstMAI GTCTC 1 cut(s) 61
BstMBI GATC 5 cut(s) 12, 28, 421, 444, 583
BstMCI CGRYCG 1 cut(s) 126
BstMWI GCNNNNNNNGC 3 cut(s) 299, 788, 830
BstSCI CCNGG 2 cut(s) 308, 361
BstSLI GKGCMC 1 cut(s) 95
BstUI CGCG 2 cut(s) 352, 426
BstV1I GCAGC 1 cut(s) 766
BstV2I GAAGAC 1 cut(s) 717
BstXI CCANNNNNNTGG 2 cut(s) 295, 321
BstZI CGGCCG 1 cut(s) 123
BsuI GTATCC 1 cut(s) 48
BsuRI GGCC 6 cut(s) 93, 125, 313, 345, 366, 571
BtsCI GGATG 1 cut(s) 484
BtsIMutI CAGTG 1 cut(s) 511
Cac8I GCNNGC 3 cut(s) 95, 343, 613
CaiI CAGNNNCTG 1 cut(s) 389
CfoI GCGC 1 cut(s) 463
Cfr10I RCCGGY 1 cut(s) 125
Cfr13I GGNCC 6 cut(s) 91, 92, 257, 328, 356, 365
CseI GACGC 3 cut(s) 291, 415, 605
Csp6I GTAC 3 cut(s) 52, 232, 274
CspCI CAANNNNNGTGG 2 cut(s) 453, 488
CviAII CATG 3 cut(s) 218, 715, 755
CviQI GTAC 3 cut(s) 52, 232, 274
DdeI CTNAG 7 cut(s) 264, 479, 642, 701, 737, 744, 774
DinI GGCGCC 1 cut(s) 462
DpnI GATC 5 cut(s) 14, 30, 423, 446, 585
DpnII GATC 5 cut(s) 12, 28, 421, 444, 583
EaeI YGGCCR 3 cut(s) 123, 311, 569
EagI CGGCCG 1 cut(s) 123
Eam1104I CTCTTC 2 cut(s) 180, 387
EarI CTCTTC 2 cut(s) 180, 387
EclXI CGGCCG 1 cut(s) 123
Eco130I CCWWGG 1 cut(s) 288
Eco147I AGGCCT 1 cut(s) 345
Eco24I GRGCYC 1 cut(s) 95
Eco47I GGWCC 3 cut(s) 257, 328, 356
Eco52I CGGCCG 1 cut(s) 123
Eco57I CTGAAG 2 cut(s) 411, 813
Eco72I CACGTG 1 cut(s) 21
Eco88I CYCGRG 1 cut(s) 104
EcoO109I RGGNCCY 2 cut(s) 257, 356
EcoRI GAATTC 1 cut(s) 523
EcoT14I CCWWGG 1 cut(s) 288
EcoT38I GRGCYC 1 cut(s) 95
EgeI GGCGCC 1 cut(s) 462
EheI GGCGCC 1 cut(s) 462
ErhI CCWWGG 1 cut(s) 288
Esp3I CGTCTC 1 cut(s) 61
FaeI CATG 3 cut(s) 221, 718, 758
FaiI YATR 7 cut(s) 219, 320, 322, 449, 677, 716, 756
FaqI GGGAC 1 cut(s) 812
FatI CATG 3 cut(s) 217, 714, 754
FauI CCCGC 2 cut(s) 102, 345
FauNDI CATATG 1 cut(s) 320
FbaI TGATCA 2 cut(s) 12, 444
Fnu4HI GCNGC 1 cut(s) 780
FokI GGATG 1 cut(s) 471
FriOI GRGCYC 1 cut(s) 95
Fsp4HI GCNGC 1 cut(s) 780
FspBI CTAG 2 cut(s) 203, 284
GlaI GCGC 1 cut(s) 462
GluI GCNGC 1 cut(s) 780
GsuI CTGGAG 1 cut(s) 53
HaeII RGCGCY 1 cut(s) 464
HaeIII GGCC 6 cut(s) 93, 125, 313, 345, 366, 571
HapII CCGG 4 cut(s) 126, 310, 363, 378
HgaI GACGC 3 cut(s) 291, 415, 605
HhaI GCGC 1 cut(s) 463
Hin1I GRCGYC 1 cut(s) 461
Hin1II CATG 3 cut(s) 221, 718, 758
Hin6I GCGC 1 cut(s) 461
HinP1I GCGC 1 cut(s) 461
HincII GTYRAC 1 cut(s) 306
HindII GTYRAC 1 cut(s) 306
HinfI GANTC 3 cut(s) 6, 475, 501
HpaII CCGG 4 cut(s) 126, 310, 363, 378
HphI GGTGA 1 cut(s) 169
Hpy166II GTNNAC 1 cut(s) 306
Hpy188I TCNGA 8 cut(s) 71, 165, 385, 431, 595, 636, 643, 775
Hpy188III TCNNGA 3 cut(s) 10, 32, 472
Hpy8I GTNNAC 1 cut(s) 306
Hpy99I CGWCG 1 cut(s) 431
HpyCH4III ACNGT 4 cut(s) 250, 375, 515, 532
HpyCH4IV ACGT 2 cut(s) 20, 54
HpyCH4V TGCA 2 cut(s) 24, 341
HpyF10VI GCNNNNNNNGC 3 cut(s) 299, 788, 830
HpyF3I CTNAG 7 cut(s) 264, 479, 642, 701, 737, 744, 774
HpySE526I ACGT 2 cut(s) 20, 54
Hsp92I GRCGYC 1 cut(s) 461
Hsp92II CATG 3 cut(s) 221, 718, 758
HspAI GCGC 1 cut(s) 461
KasI GGCGCC 1 cut(s) 460
Ksp22I TGATCA 2 cut(s) 12, 444
Kzo9I GATC 5 cut(s) 12, 28, 421, 444, 583
Lsp1109I GCAGC 1 cut(s) 766
LweI GCATC 1 cut(s) 778
MaeI CTAG 2 cut(s) 203, 284
MaeII ACGT 2 cut(s) 20, 54
MaeIII GTNAC 1 cut(s) 175
MalI GATC 5 cut(s) 14, 30, 423, 446, 585
MbiI CCGCTC 1 cut(s) 97
MboI GATC 5 cut(s) 12, 28, 421, 444, 583
MboII GAAGA 4 cut(s) 194, 197, 404, 722
MfeI CAATTG 1 cut(s) 540
MhlI GDGCHC 1 cut(s) 95
MlsI TGGCCA 1 cut(s) 571
MluCI AATT 6 cut(s) 150, 523, 540, 573, 602, 687
MluNI TGGCCA 1 cut(s) 571
Mly113I GGCGCC 1 cut(s) 461
MlyI GAGTC 1 cut(s) 15
MmeI TCCRAC 3 cut(s) 276, 409, 788
Mox20I TGGCCA 1 cut(s) 571
MscI TGGCCA 1 cut(s) 571
MseI TTAA 1 cut(s) 750
MslI CAYNNNNRTG 2 cut(s) 319, 323
Msp20I TGGCCA 1 cut(s) 571
MspI CCGG 4 cut(s) 126, 310, 363, 378
MspR9I CCNGG 2 cut(s) 310, 363
MunI CAATTG 1 cut(s) 540
MvnI CGCG 2 cut(s) 352, 426
MwoI GCNNNNNNNGC 3 cut(s) 299, 788, 830
NarI GGCGCC 1 cut(s) 461
NciI CCSGG 2 cut(s) 310, 363
NdeI CATATG 1 cut(s) 320
NdeII GATC 5 cut(s) 12, 28, 421, 444, 583
NlaIII CATG 3 cut(s) 221, 718, 758
NlaIV GGNNCC 4 cut(s) 93, 258, 357, 462
NmuCI GTSAC 1 cut(s) 175
NspV TTCGAA 1 cut(s) 154
PceI AGGCCT 1 cut(s) 345
PfeI GAWTC 2 cut(s) 475, 501
PkrI GCNGC 1 cut(s) 781
PleI GAGTC 1 cut(s) 14
PluTI GGCGCC 1 cut(s) 464
PmaCI CACGTG 1 cut(s) 21
PmlI CACGTG 1 cut(s) 21
PpsI GAGTC 1 cut(s) 14
Ppu21I YACGTR 1 cut(s) 21
PpuMI RGGWCCY 2 cut(s) 257, 356
Psp5II RGGWCCY 2 cut(s) 257, 356
PspCI CACGTG 1 cut(s) 21
PspN4I GGNNCC 4 cut(s) 93, 258, 357, 462
PspOMI GGGCCC 1 cut(s) 91
PspPI GGNCC 6 cut(s) 91, 92, 257, 328, 356, 365
PspPPI RGGWCCY 2 cut(s) 257, 356
PstNI CAGNNNCTG 1 cut(s) 389
RsaI GTAC 3 cut(s) 53, 233, 275
RsaNI GTAC 3 cut(s) 52, 232, 274
RseI CAYNNNNRTG 2 cut(s) 319, 323
SaqAI TTAA 1 cut(s) 750
SatI GCNGC 1 cut(s) 780
Sau3AI GATC 5 cut(s) 12, 28, 421, 444, 583
Sau96I GGNCC 6 cut(s) 91, 92, 257, 328, 356, 365
SchI GAGTC 1 cut(s) 15
ScrFI CCNGG 2 cut(s) 310, 363
SduI GDGCHC 1 cut(s) 95
SfaNI GCATC 1 cut(s) 778
SfoI GGCGCC 1 cut(s) 462
SfuI TTCGAA 1 cut(s) 154
SinI GGWCC 3 cut(s) 257, 328, 356
SmiMI CAYNNNNRTG 2 cut(s) 319, 323
Sse9I AATT 6 cut(s) 150, 523, 540, 573, 602, 687
SseBI AGGCCT 1 cut(s) 345
SsiI CCGC 3 cut(s) 95, 352, 407
SspDI GGCGCC 1 cut(s) 460
SspI AATATT 1 cut(s) 113
SspMI CTAG 2 cut(s) 203, 284
StuI AGGCCT 1 cut(s) 345
StyD4I CCNGG 2 cut(s) 308, 361
StyI CCWWGG 1 cut(s) 288
TaaI ACNGT 4 cut(s) 250, 375, 515, 532
TaiI ACGT 2 cut(s) 23, 57
TaqI TCGA 2 cut(s) 48, 154
TasI AATT 6 cut(s) 150, 523, 540, 573, 602, 687
TatI WGTACW 1 cut(s) 231
TfiI GAWTC 2 cut(s) 475, 501
Tru1I TTAA 1 cut(s) 750
Tru9I TTAA 1 cut(s) 750
TscAI CASTG 1 cut(s) 518
TseFI GTSAC 1 cut(s) 175
TseI GCWGC 1 cut(s) 779
Tsp45I GTSAC 1 cut(s) 175
TspDTI ATGAA 6 cut(s) 34, 228, 307, 723, 731, 793
TspRI CASTG 1 cut(s) 518
VpaK11BI GGWCC 3 cut(s) 257, 328, 356
XapI RAATTY 2 cut(s) 150, 523
XcmI CCANNNNNNNNNTGG 1 cut(s) 564
XspI CTAG 2 cut(s) 203, 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.