Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002460

Physical Location & Seq

Genomic Coordinates Forward (+)

18558965 .. 18563309

Gene Structure 4345 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g27320.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2583 bp

ATGGATGATTATCAGGAGATGGAAAGGTTCGGAATGGACAACGATTTCGAGGGCGGCGAGTTGATCGACGGCGAGTTCTATTACCGCAACCGCAAGACTAAGCGCGTCCAGACCAAAGACGATTCTATCTACGGCTGCTTCGCCGATTCCGACTCCGACGAAGACGACGGCTCCAGGAAACGCCGCAAAGACAAAAAGACCGCCGACTTCACAAAGCCCGTCAGCTTCGTCTCCACCGGCGTCGTCATGCCCAACCAGGAAGCCGAGAACGATTTGAAGCAGCCAACCGGCGACATCGACCGCGCTCGTGCTTCAGGTTCTGGTTTAGGGTTCAATAATTCTGGTGGTGGTTTAGGGTTTGGTAATTCTGGTAGTTCCGGTTTAGGATTGAATAGTTCAGTCGGGAAGGATGAGGAAGATGCTAGCAATTTTCTACCGTCGGCGTTTGGGAAGAAGATAATGGAGGCAGCTGAGAGGAGGAGACACAAGGAGAAGGAGAAGATGAAATTGCAGCAGCAGCAGAGTAGTCAGTCTCGGAGAAATTCGGAATCCAAAGGAGTGGGGGATGGGAATTTGGGGTCCTTTGAGCAGCACACAAAGGCTTTTGGGATGAAGATGCTTGAGAAAATGGGATACAAAGGAGGTGGGCTTGGGAAGAACCAGCAAGGGATTCTTGCTCCCATTGAAGCTAAGCTGAGGCCGAAGAATATGGGTATGGGGTTTAATGACTACAAGGAAACCAAGCAGCCCAGTGTGCAAGAGTTGGATGAGGAAAAGCCGAAGAAGCAGTTGCCAGCTGCTGCTGCCGGTACCAAGAAGAGGAATTCCTGGAAGAAGGTGGTTGCCAGTAGGAGTAACAAGGATAGGTATATTTCTGCCAAGGAGTTGTTAGCCAAGAAAGAAGAAGAAGGTGTCGAGGTCTTTGTGCAGAAGGTGGTTGATATGCGGGGACCTCAGGTACGAGTTCTGACCAATTTGGAGAATTTGAATGCTGAGGAGAAGGCTAGGGAAGAGAATGTTCCCATGCCTGAGCTACAGCACAACTTGAGGTTGATTCTAGACATGGCTGAGCTCGATATCCAAAAGATTGATAGGGATTTGAGGAATGAAAGAGAGACTGCATTAATCTTGAAGCAGGAGAAGGAGAAGTTGCAAGCCGAGGTGGATATGCAGAAGGAGCACTTGGATAGCTTGGATGATATCACAAATGTGTTGGACCGATTGGGAGAAGAGAAAGCCATGGGAATATTGACGCTGGATTCTCTGGCAAAGGGTTTCAGTGACCTGCAGAGGAGGTATGCCGATGACTATAAGGTATGTAACCTGGCCTGCATTGCCTGTTCCTTTGCACTCCCTTTGTTTATCAGGATGTTTCAGGGTTGGGATCCTTTGCGGAACCCGTCTCATGGAATGGATGTGGTATCCACCTGGAAGGCTCTGCTTCATGGGGAGGGGGAGTATGAGCGGTGCCTTGATATATGGGATTCTTCAATGTCTCCTTATACCCAATTGGTCTCCGAGGTTGTGGTACCAGCGGTGAGGATCGCTGGAGTAAATACTTGGCAGCCTAAGGACCCTGAACCCATGCTTCGTTTTTTGGAGTCTTGGGAGAAATTGCTGCCGGCTCCTGTTCTTAATAGCATATTGGATGTGGTAGTCTTTCCCAAATTGAAGGAAGCAGTTGACTTTTGGGAACCTCACCGGGACACCATTCCCATTCACGTCTGGGTGCATCCATGGCTACCGCTATTGGGACACAAGTTGGAGGAGGTGTACCACACAATACGCTACAAGTTGAGTAATGTTCTAGGTGCATGGCACCCCAGTGATGGATCTGCTTATACGATACTCTCACCTTGGAAGAAGGTTTTTGATCCTGCAAGCTGGGAACAGCTTATGCATCGATTTATTGTACCCAAATTGCAGCTTGTTTTGCAAGACTTCCAAGTAAACCCTGCAGATCAGAGACTTGATCAGTTTAATTGGGTCATGAGTTGGGCTTCTGCTATTCCAATTCATCTGATGGTAGATATGTTGGAGAAGTTTTTCTTCCCCAAGTGGATACATGTTTTATATCAATGGTTAATATCAAACCCGAACTTTGAAGAAGTTTTGAATTGGTATAAAGGTTGGAAGGAACTTATCTCTGAAGAGCTTCACGCAAATGAAAGTATCCGCTATCAGCTTAATTGTGGCCTTGACATGATGAATCGTGCTGTTGAGGGTATGGAGGTGGTTCAACCTGGTTTGAAAGAGAATATTAGCTACCTAAGAGTGCTTGAGCAACGGCAATTTGAGGCACAGCAAAAAGCAGCAGCAGCCACAGCCCATATGGATGGCACTGGTCACGAGATGACCCTGAAAGATGTTATTGAAGCCCATGCACAGCAGAATGGGTTGCTATTTAGGCCTAAGCCTACTAGGACACATAATGGTCACCAGATATACGGGTTTGGTAAAGTAAGCATAATAGTTGACTCTCTAAATCAAAAGGTGTATGCCCAAACAGAGGATACTTGGTCCCTTGTATCCCTGGAGAAGTTGCTCGACCTGCACAATACCTCCCTTACAAAAAGACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000375 GO:0000377 GO:0000390 GO:0000398 GO:0000781 GO:0000784 GO:0003674 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022411 GO:0030154 GO:0030198 GO:0031012 GO:0031333 GO:0031974 GO:0031981 GO:0032091 GO:0032502 GO:0032984 GO:0032988 GO:0032991 GO:0034641 GO:0042752 GO:0043021 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043393 GO:0043933 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0046483 GO:0048519 GO:0048523 GO:0048869 GO:0050789 GO:0050794 GO:0051098 GO:0051100 GO:0051128 GO:0051129 GO:0065007 GO:0065009 GO:0070013 GO:0070990 GO:0071008 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0098687 GO:1901360 GO:1902494 GO:1990446 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch GCFC TIP_N

Protein Analysis

861

Amino Acids

98.1

Weight (kDa)

6.01

Isoelectric Point (pI)

43.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIP_N	PF12457	2 - 91	1.8e-22	Tuftelin interacting protein N terminal
G-patch	PF01585	199 - 240	2.8e-14	G-patch domain
G-patch_2	PF12656	201 - 242	1.9e-06	G-patch domain
GCFC	PF07842	419 - 691	3.1e-91	GC-rich sequence DNA-binding factor-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17070
fragaria_vesca	FvH4_2g25582 FvH4_5g27320
malus_domestica	MD08G1250100.v1.1 MD15G1445100.v1.1
prunus_persica	Prupe.1G587200_v2.0.a1 Prupe.5G048700_v2.0.a1
pyrus_communis	pycom08g21680 pycom15g39220
rosa_chinensis	RchiOBHm_Chr6g0293801 RchiOBHm_Chr6g0293811 RchiOBHm_Chr7g0218481
rosa_laevigata	RLG00000002370 RLG00000011921 RLG00000012034
rosa_multiflora	Rmu_co8485319.1_g000001 Rmu_sc0001301.1_g000062 Rmu_sc0001301.1_g000063 Rmu_sc0001354.1_g000013 Rmu_sc0023058.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240910 Rroxscaffold_7G00173890 Rroxscaffold_7G00175120
rosa_rugosa	Rorug06G0238200 Rorug07G0177400
rosa_samantha	Rh6AG339400 Rh6AG351600 Rh6BG346700 Rh6BG358400 Rh6CG353500 Rh6CG365600 Rh6DG339500 Rh6DG352200 Rh6DG352300 Rh7AG318900 Rh7BG310800 Rh7CG335800 Rh7DG318000
rosa_wichuraiana	Rw6G029540 Rw6G030580 Rw7G027140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1293, 2559
Acc65I	GGTACC	2 cut(s)	809, 1528
AccB1I	GGYRCC	4 cut(s)	809, 1467, 1528, 1818
AccBSI	CCGCTC	1 cut(s)	1465
AccII	CGCG	2 cut(s)	105, 303
AclWI	GGATC	5 cut(s)	1379, 1392, 1550, 1840, 1868
AcsI	RAATTY	4 cut(s)	541, 571, 823, 982
AcuI	CTGAAG	2 cut(s)	297, 2169
AcyI	GRCGYC	1 cut(s)	240
AfaI	GTAC	5 cut(s)	811, 960, 1530, 1775, 1914
AfiI	CCNNNNNNNGG	5 cut(s)	819, 1406, 1751, 1829, 2509
AflIII	ACRYGT	1 cut(s)	2065
AjiI	CACGTC	1 cut(s)	1723
AjnI	CCWGG	7 cut(s)	173, 255, 827, 1323, 1427, 2242, 2532
AjuI	GAANNNNNNNTTGG	2 cut(s)	1166, 1198
AleI	CACNNNNGTG	2 cut(s)	1208, 1824
Alw21I	GWGCWC	2 cut(s)	1074, 1182
Alw26I	GTCTC	8 cut(s)	235, 475, 537, 1109, 1407, 1500, 1519, 1960
AlwI	GGATC	5 cut(s)	1379, 1392, 1550, 1840, 1868
AlwNI	CAGNNNCTG	2 cut(s)	320, 800
AoxI	GGCC	4 cut(s)	698, 1326, 2194, 2408
ApoI	RAATTY	4 cut(s)	541, 571, 823, 982
ArsI	GACNNNNNNTTYG	2 cut(s)	29, 61
AseI	ATTAAT	1 cut(s)	1124
Asp700I	GAANNNNTTC	2 cut(s)	2045, 2154
Asp718I	GGTACC	2 cut(s)	809, 1528
AspLEI	GCGC	2 cut(s)	105, 305
AspS9I	GGNCC	5 cut(s)	579, 950, 1216, 1573, 2520
AsuC2I	CCSGG	1 cut(s)	1703
AsuHPI	GGTGA	4 cut(s)	1549, 1691, 1845, 2429
AsuNHI	GCTAGC	1 cut(s)	422
AvaII	GGWCC	5 cut(s)	579, 950, 1216, 1573, 2520
AxyI	CCTNAGG	2 cut(s)	954, 1569
BamHI	GGATCC	1 cut(s)	1384
BanI	GGYRCC	4 cut(s)	809, 1467, 1528, 1818
BanII	GRGCYC	1 cut(s)	1074
BauI	CACGAG	2 cut(s)	306, 2348
BbsI	GAAGAC	1 cut(s)	168
Bbv12I	GWGCWC	2 cut(s)	1074, 1182
BbvCI	CCTCAGC	2 cut(s)	695, 993
BccI	CCATC	5 cut(s)	13, 560, 1823, 2017, 2330
BceAI	ACGGC	4 cut(s)	85, 148, 184, 2303
BciT130I	CCWGG	7 cut(s)	175, 257, 829, 1325, 1429, 2244, 2534
BciVI	GTATCC	6 cut(s)	626, 1432, 2055, 2183, 2506, 2539
BclI	TGATCA	1 cut(s)	1972
BcnI	CCSGG	1 cut(s)	1703
BcoDI	GTCTC	8 cut(s)	235, 475, 537, 1109, 1407, 1500, 1519, 1960
BfaI	CTAG	5 cut(s)	423, 1005, 1058, 1808, 2421
BfmI	CTRYAG	3 cut(s)	1034, 1286, 1956
BfuAI	ACCTGC	2 cut(s)	1293, 2559
BfuI	GTATCC	6 cut(s)	626, 1432, 2055, 2183, 2506, 2539
BlpI	GCTNAGC	2 cut(s)	690, 1068
Bme1390I	CCNGG	8 cut(s)	175, 257, 829, 1325, 1429, 1703, 2244, 2534
Bme18I	GGWCC	5 cut(s)	579, 950, 1216, 1573, 2520
BmgBI	CACGTC	1 cut(s)	1723
BmgT120I	GGNCC	5 cut(s)	579, 950, 1216, 1573, 2520
BmrFI	CCNGG	8 cut(s)	175, 257, 829, 1325, 1429, 1703, 2244, 2534
BmrI	ACTGGG	2 cut(s)	744, 1818
BmsI	GCATC	4 cut(s)	409, 606, 1741, 1909
BmtI	GCTAGC	1 cut(s)	426
BmuI	ACTGGG	2 cut(s)	744, 1818
BpiI	GAAGAC	1 cut(s)	168
BpmI	CTGGAG	3 cut(s)	157, 1569, 2555
Bpu10I	CCTNAGC	4 cut(s)	695, 993, 1029, 2412
Bpu1102I	GCTNAGC	2 cut(s)	690, 1068
BpuEI	CTTGAG	3 cut(s)	641, 1066, 2300
BpuMI	CCSGG	1 cut(s)	1703
Bsa29I	ATCGAT	1 cut(s)	1903
BsaBI	GATNNNNATC	1 cut(s)	9
BsaHI	GRCGYC	1 cut(s)	240
BsaI	GGTCTC	1 cut(s)	1519
BsaJI	CCNNGG	7 cut(s)	879, 1158, 1239, 1518, 1736, 1856, 2532
BsaWI	WCCGGW	1 cut(s)	377
BsaXI	ACNNNNNCTCC	8 cut(s)	155, 185, 1442, 1472, 1757, 1787, 2546, 2576
Bsc4I	CCNNNNNNNGG	5 cut(s)	819, 1406, 1751, 1829, 2509
Bse118I	RCCGGY	4 cut(s)	236, 287, 806, 1621
Bse1I	ACTGG	4 cut(s)	750, 846, 1824, 2347
Bse21I	CCTNAGG	2 cut(s)	954, 1569
Bse3DI	GCAATG	1 cut(s)	1332
Bse8I	GATNNNNATC	1 cut(s)	9
BseBI	CCWGG	7 cut(s)	175, 257, 829, 1325, 1429, 2244, 2534
BseCI	ATCGAT	1 cut(s)	1903
BseDI	CCNNGG	7 cut(s)	879, 1158, 1239, 1518, 1736, 1856, 2532
BseJI	GATNNNNATC	1 cut(s)	9
BseLI	CCNNNNNNNGG	5 cut(s)	819, 1406, 1751, 1829, 2509
BseMI	GCAATG	1 cut(s)	1332
BseMII	CTCAG	6 cut(s)	462, 686, 968, 984, 1020, 1059
BseNI	ACTGG	4 cut(s)	750, 846, 1824, 2347
BseRI	GAGGAG	5 cut(s)	490, 493, 1010, 1306, 1781
BseYI	CCCAGC	1 cut(s)	1884
BsgI	GTGCAG	2 cut(s)	947, 2537
Bsh1236I	CGCG	2 cut(s)	105, 303
Bsh1285I	CGRYCG	1 cut(s)	301
BshFI	GGCC	4 cut(s)	700, 1328, 2196, 2410
BshNI	GGYRCC	4 cut(s)	809, 1467, 1528, 1818
BshVI	ATCGAT	1 cut(s)	1903
BsiEI	CGRYCG	1 cut(s)	301
BsiHKAI	GWGCWC	2 cut(s)	1074, 1182
BsiSI	CCGG	6 cut(s)	237, 288, 378, 807, 1622, 1702
BslFI	GGGAC	4 cut(s)	963, 1718, 1767, 2506
BslI	CCNNNNNNNGG	5 cut(s)	819, 1406, 1751, 1829, 2509
BsmAI	GTCTC	8 cut(s)	235, 475, 537, 1109, 1407, 1500, 1519, 1960
BsmBI	CGTCTC	2 cut(s)	235, 1407
BsmFI	GGGAC	4 cut(s)	963, 1718, 1767, 2506
BsmI	GAATGC	1 cut(s)	994
BsnI	GGCC	4 cut(s)	700, 1328, 2196, 2410
Bso31I	GGTCTC	1 cut(s)	1519
Bsp1286I	GDGCHC	2 cut(s)	1074, 1182
Bsp143I	GATC	7 cut(s)	63, 1384, 1542, 1832, 1873, 1960, 1972
Bsp1720I	GCTNAGC	2 cut(s)	690, 1068
Bsp19I	CCATGG	2 cut(s)	1239, 1736
BspANI	GGCC	4 cut(s)	700, 1328, 2196, 2410
BspCNI	CTCAG	6 cut(s)	463, 687, 967, 985, 1021, 1060
BspDI	ATCGAT	1 cut(s)	1903
BspFNI	CGCG	2 cut(s)	105, 303
BspHI	TCATGA	1 cut(s)	1989
BspMAI	CTGCAG	2 cut(s)	1290, 1960
BspMI	ACCTGC	2 cut(s)	1293, 2559
BspOI	GCTAGC	1 cut(s)	426
BspPI	GGATC	5 cut(s)	1379, 1392, 1550, 1840, 1868
BspQI	GCTCTTC	1 cut(s)	2145
BspT107I	GGYRCC	4 cut(s)	809, 1467, 1528, 1818
BspTNI	GGTCTC	1 cut(s)	1519
BsrBI	CCGCTC	1 cut(s)	1465
BsrDI	GCAATG	1 cut(s)	1332
BsrFI	RCCGGY	4 cut(s)	236, 287, 806, 1621
BsrI	ACTGG	4 cut(s)	750, 846, 1824, 2347
BssAI	RCCGGY	4 cut(s)	236, 287, 806, 1621
BssECI	CCNNGG	7 cut(s)	879, 1158, 1239, 1518, 1736, 1856, 2532
BssMI	GATC	7 cut(s)	63, 1384, 1542, 1832, 1873, 1960, 1972
BssNI	GRCGYC	1 cut(s)	240
BssSI	CACGAG	2 cut(s)	306, 2348
BssT1I	CCWWGG	4 cut(s)	879, 1239, 1736, 1856
Bst2BI	CACGAG	2 cut(s)	306, 2348
Bst2UI	CCWGG	7 cut(s)	175, 257, 829, 1325, 1429, 2244, 2534
Bst4CI	ACNGT	1 cut(s)	438
Bst6I	CTCTTC	4 cut(s)	812, 1005, 1224, 2145
BstACI	GRCGYC	1 cut(s)	240
BstC8I	GCNNGC	6 cut(s)	424, 795, 1155, 1330, 1623, 1882
BstDSI	CCRYGG	2 cut(s)	1239, 1736
BstEII	GGTNACC	1 cut(s)	2435
BstFNI	CGCG	2 cut(s)	105, 303
BstHHI	GCGC	2 cut(s)	105, 305
BstKTI	GATC	7 cut(s)	66, 1387, 1545, 1835, 1876, 1963, 1975
BstMAI	GTCTC	8 cut(s)	235, 475, 537, 1109, 1407, 1500, 1519, 1960
BstMBI	GATC	7 cut(s)	63, 1384, 1542, 1832, 1873, 1960, 1972
BstMCI	CGRYCG	1 cut(s)	301
BstNI	CCWGG	7 cut(s)	175, 257, 829, 1325, 1429, 2244, 2534
BstNSI	RCATGY	1 cut(s)	2069
BstPI	GGTNACC	1 cut(s)	2435
BstSCI	CCNGG	8 cut(s)	173, 255, 827, 1323, 1427, 1701, 2242, 2532
BstSFI	CTRYAG	3 cut(s)	1034, 1286, 1956
BstUI	CGCG	2 cut(s)	105, 303
BstV2I	GAAGAC	1 cut(s)	168
BstX2I	RGATCY	2 cut(s)	1384, 1832
BstXI	CCANNNNNNTGG	2 cut(s)	559, 2336
BstYI	RGATCY	2 cut(s)	1384, 1832
Bsu15I	ATCGAT	1 cut(s)	1903
Bsu36I	CCTNAGG	2 cut(s)	954, 1569
BsuI	GTATCC	6 cut(s)	626, 1432, 2055, 2183, 2506, 2539
BsuRI	GGCC	4 cut(s)	700, 1328, 2196, 2410
BsuTUI	ATCGAT	1 cut(s)	1903
BtgI	CCRYGG	2 cut(s)	1239, 1736
BtrI	CACGTC	1 cut(s)	1723
BtsIMutI	CAGTG	4 cut(s)	757, 1285, 1831, 2340
BveI	ACCTGC	2 cut(s)	1293, 2559
Cac8I	GCNNGC	6 cut(s)	424, 795, 1155, 1330, 1623, 1882
CaiI	CAGNNNCTG	2 cut(s)	320, 800
CciI	TCATGA	1 cut(s)	1989
CfoI	GCGC	2 cut(s)	105, 305
Cfr10I	RCCGGY	4 cut(s)	236, 287, 806, 1621
Cfr13I	GGNCC	5 cut(s)	579, 950, 1216, 1573, 2520
ClaI	ATCGAT	1 cut(s)	1903
CseI	GACGC	3 cut(s)	94, 229, 1261
CsiI	ACCWGGT	1 cut(s)	2242
Csp6I	GTAC	5 cut(s)	810, 959, 1529, 1774, 1913
CspCI	CAANNNNNGTGG	2 cut(s)	625, 660
CviQI	GTAC	5 cut(s)	810, 959, 1529, 1774, 1913
DpnI	GATC	7 cut(s)	65, 1386, 1544, 1834, 1875, 1962, 1974
DpnII	GATC	7 cut(s)	63, 1384, 1542, 1832, 1873, 1960, 1972
Eam1104I	CTCTTC	4 cut(s)	812, 1005, 1224, 2145
EarI	CTCTTC	4 cut(s)	812, 1005, 1224, 2145
Ecl136II	GAGCTC	1 cut(s)	1072
Eco130I	CCWWGG	4 cut(s)	879, 1239, 1736, 1856
Eco147I	AGGCCT	1 cut(s)	2410
Eco24I	GRGCYC	1 cut(s)	1074
Eco31I	GGTCTC	1 cut(s)	1519
Eco32I	GATATC	2 cut(s)	1078, 1201
Eco47I	GGWCC	5 cut(s)	579, 950, 1216, 1573, 2520
Eco53kI	GAGCTC	1 cut(s)	1072
Eco57I	CTGAAG	2 cut(s)	297, 2169
Eco81I	CCTNAGG	2 cut(s)	954, 1569
Eco91I	GGTNACC	1 cut(s)	2435
EcoICRI	GAGCTC	1 cut(s)	1072
EcoO109I	RGGNCCY	3 cut(s)	579, 950, 1573
EcoO65I	GGTNACC	1 cut(s)	2435
EcoRI	GAATTC	1 cut(s)	823
EcoRII	CCWGG	7 cut(s)	173, 255, 827, 1323, 1427, 2242, 2532
EcoRV	GATATC	2 cut(s)	1078, 1201
EcoT14I	CCWWGG	4 cut(s)	879, 1239, 1736, 1856
EcoT22I	ATGCAT	1 cut(s)	1902
EcoT38I	GRGCYC	1 cut(s)	1074
ErhI	CCWWGG	4 cut(s)	879, 1239, 1736, 1856
Esp3I	CGTCTC	2 cut(s)	235, 1407
FalI	AAGNNNNNCTT	6 cut(s)	657, 689, 1166, 1198, 2033, 2065
FaqI	GGGAC	4 cut(s)	963, 1718, 1767, 2506
FauI	CCCGC	1 cut(s)	939
FauNDI	CATATG	1 cut(s)	2331
FbaI	TGATCA	1 cut(s)	1972
FriOI	GRGCYC	1 cut(s)	1074
FspBI	CTAG	5 cut(s)	423, 1005, 1058, 1808, 2421
GlaI	GCGC	2 cut(s)	104, 304
GsaI	CCCAGC	1 cut(s)	1888
GsuI	CTGGAG	3 cut(s)	157, 1569, 2555
HaeIII	GGCC	4 cut(s)	700, 1328, 2196, 2410
HapII	CCGG	6 cut(s)	237, 288, 378, 807, 1622, 1702
HgaI	GACGC	3 cut(s)	94, 229, 1261
HhaI	GCGC	2 cut(s)	105, 305
Hin1I	GRCGYC	1 cut(s)	240
Hin6I	GCGC	2 cut(s)	103, 303
HinP1I	GCGC	2 cut(s)	103, 303
HincII	GTYRAC	2 cut(s)	1684, 2476
HindII	GTYRAC	2 cut(s)	1684, 2476
HpaII	CCGG	6 cut(s)	237, 288, 378, 807, 1622, 1702
HphI	GGTGA	4 cut(s)	1549, 1691, 1845, 2429
Hpy166II	GTNNAC	4 cut(s)	1684, 1774, 1951, 2476
Hpy188III	TCNNGA	8 cut(s)	14, 109, 403, 1058, 1129, 1366, 1990, 2348
Hpy8I	GTNNAC	4 cut(s)	1684, 1774, 1951, 2476
Hpy99I	CGWCG	5 cut(s)	71, 161, 170, 245, 442
HpyCH4III	ACNGT	1 cut(s)	438
HpyCH4IV	ACGT	1 cut(s)	1722
HpySE526I	ACGT	1 cut(s)	1722
Hsp92I	GRCGYC	1 cut(s)	240
HspAI	GCGC	2 cut(s)	103, 303
KpnI	GGTACC	2 cut(s)	813, 1532
KroI	GCCGGC	1 cut(s)	1621
KroNI	GCCGGC	1 cut(s)	1623
Ksp22I	TGATCA	1 cut(s)	1972
Kzo9I	GATC	7 cut(s)	63, 1384, 1542, 1832, 1873, 1960, 1972
LguI	GCTCTTC	1 cut(s)	2145
LmnI	GCTCC	4 cut(s)	176, 682, 1177, 1630
LweI	GCATC	4 cut(s)	409, 606, 1741, 1909
MabI	ACCWGGT	1 cut(s)	2242
MaeI	CTAG	5 cut(s)	423, 1005, 1058, 1808, 2421
MaeII	ACGT	1 cut(s)	1722
MaeIII	GTNAC	5 cut(s)	854, 1280, 1319, 2345, 2435
MalI	GATC	7 cut(s)	65, 1386, 1544, 1834, 1875, 1962, 1974
MbiI	CCGCTC	1 cut(s)	1465
MboI	GATC	7 cut(s)	63, 1384, 1542, 1832, 1873, 1960, 1972
MfeI	CAATTG	1 cut(s)	1508
MflI	RGATCY	2 cut(s)	1384, 1832
MhlI	GDGCHC	2 cut(s)	1074, 1182
MlyI	GAGTC	3 cut(s)	146, 1610, 2471
MmeI	TCCRAC	7 cut(s)	174, 180, 744, 1194, 1743, 2016, 2111
Mph1103I	ATGCAT	1 cut(s)	1902
MroNI	GCCGGC	1 cut(s)	1621
MroXI	GAANNNNTTC	2 cut(s)	2045, 2154
MseI	TTAA	6 cut(s)	723, 1124, 1635, 1980, 2084, 2187
MslI	CAYNNNNRTG	4 cut(s)	1208, 1824, 2163, 2334
MspA1I	CMGCKG	3 cut(s)	470, 797, 1535
MspI	CCGG	6 cut(s)	237, 288, 378, 807, 1622, 1702
MspR9I	CCNGG	8 cut(s)	175, 257, 829, 1325, 1429, 1703, 2244, 2534
MunI	CAATTG	1 cut(s)	1508
Mva1269I	GAATGC	1 cut(s)	994
MvaI	CCWGG	7 cut(s)	175, 257, 829, 1325, 1429, 2244, 2534
MvnI	CGCG	2 cut(s)	105, 303
NaeI	GCCGGC	1 cut(s)	1623
NciI	CCSGG	1 cut(s)	1703
NcoI	CCATGG	2 cut(s)	1239, 1736
NdeI	CATATG	1 cut(s)	2331
NdeII	GATC	7 cut(s)	63, 1384, 1542, 1832, 1873, 1960, 1972
NgoMIV	GCCGGC	1 cut(s)	1621
NheI	GCTAGC	1 cut(s)	422
NmeAIII	GCCGAG	2 cut(s)	289, 1183
NmuCI	GTSAC	3 cut(s)	1280, 2345, 2435
NsiI	ATGCAT	1 cut(s)	1902
NspI	RCATGY	1 cut(s)	2069
OliI	CACNNNNGTG	2 cut(s)	1208, 1824
PagI	TCATGA	1 cut(s)	1989
PceI	AGGCCT	1 cut(s)	2410
PciI	ACATGT	1 cut(s)	2065
PciSI	GCTCTTC	1 cut(s)	2145
PcsI	WCGNNNNNNNCGW	2 cut(s)	54, 147
PctI	GAATGC	1 cut(s)	994
PdiI	GCCGGC	1 cut(s)	1623
PdmI	GAANNNNTTC	2 cut(s)	2045, 2154
PfeI	GAWTC	8 cut(s)	122, 146, 548, 670, 1054, 1259, 1484, 2209
PfoI	TCCNGGA	2 cut(s)	173, 827
PleI	GAGTC	3 cut(s)	146, 1609, 2471
PpsI	GAGTC	3 cut(s)	146, 1609, 2471
PpuMI	RGGWCCY	3 cut(s)	579, 950, 1573
PscI	ACATGT	1 cut(s)	2065
PshBI	ATTAAT	1 cut(s)	1124
Psp124BI	GAGCTC	1 cut(s)	1074
Psp5II	RGGWCCY	3 cut(s)	579, 950, 1573
Psp6I	CCWGG	7 cut(s)	173, 255, 827, 1323, 1427, 2242, 2532
PspEI	GGTNACC	1 cut(s)	2435
PspFI	CCCAGC	1 cut(s)	1884
PspGI	CCWGG	7 cut(s)	173, 255, 827, 1323, 1427, 2242, 2532
PspPI	GGNCC	5 cut(s)	579, 950, 1216, 1573, 2520
PspPPI	RGGWCCY	3 cut(s)	579, 950, 1573
PstI	CTGCAG	2 cut(s)	1290, 1960
PstNI	CAGNNNCTG	2 cut(s)	320, 800
PsuI	RGATCY	2 cut(s)	1384, 1832
PvuII	CAGCTG	2 cut(s)	470, 797
RsaI	GTAC	5 cut(s)	811, 960, 1530, 1775, 1914
RsaNI	GTAC	5 cut(s)	810, 959, 1529, 1774, 1913
RseI	CAYNNNNRTG	4 cut(s)	1208, 1824, 2163, 2334
SacI	GAGCTC	1 cut(s)	1074
SapI	GCTCTTC	1 cut(s)	2145
SaqAI	TTAA	6 cut(s)	723, 1124, 1635, 1980, 2084, 2187
Sau3AI	GATC	7 cut(s)	63, 1384, 1542, 1832, 1873, 1960, 1972
Sau96I	GGNCC	5 cut(s)	579, 950, 1216, 1573, 2520
SchI	GAGTC	3 cut(s)	146, 1610, 2471
ScrFI	CCNGG	8 cut(s)	175, 257, 829, 1325, 1429, 1703, 2244, 2534
SduI	GDGCHC	2 cut(s)	1074, 1182
SexAI	ACCWGGT	1 cut(s)	2242
SfaNI	GCATC	4 cut(s)	409, 606, 1741, 1909
SfcI	CTRYAG	3 cut(s)	1034, 1286, 1956
SgrAI	CRCCGGYG	1 cut(s)	236
SinI	GGWCC	5 cut(s)	579, 950, 1216, 1573, 2520
SmiMI	CAYNNNNRTG	4 cut(s)	1208, 1824, 2163, 2334
SmlI	CTYRAG	3 cut(s)	620, 1045, 2279
SmoI	CTYRAG	3 cut(s)	620, 1045, 2279
SseBI	AGGCCT	1 cut(s)	2410
SspI	AATATT	2 cut(s)	1248, 2260
SspMI	CTAG	5 cut(s)	423, 1005, 1058, 1808, 2421
SstI	GAGCTC	1 cut(s)	1074
StuI	AGGCCT	1 cut(s)	2410
StyD4I	CCNGG	8 cut(s)	173, 255, 827, 1323, 1427, 1701, 2242, 2532
StyI	CCWWGG	4 cut(s)	879, 1239, 1736, 1856
TaaI	ACNGT	1 cut(s)	438
TaiI	ACGT	1 cut(s)	1725
TaqI	TCGA	7 cut(s)	48, 66, 297, 915, 1074, 1903, 2547
TaqII	GACCGA	1 cut(s)	1233
TauI	GCSGC	2 cut(s)	57, 186
TfiI	GAWTC	8 cut(s)	122, 146, 548, 670, 1054, 1259, 1484, 2209
Tru1I	TTAA	6 cut(s)	723, 1124, 1635, 1980, 2084, 2187
Tru9I	TTAA	6 cut(s)	723, 1124, 1635, 1980, 2084, 2187
TscAI	CASTG	4 cut(s)	757, 1285, 1831, 2347
TseFI	GTSAC	3 cut(s)	1280, 2345, 2435
Tsp45I	GTSAC	3 cut(s)	1280, 2345, 2435
TspDTI	ATGAA	7 cut(s)	518, 626, 1122, 1433, 2006, 2181, 2222
TspRI	CASTG	4 cut(s)	757, 1285, 1831, 2347
VpaK11BI	GGWCC	5 cut(s)	579, 950, 1216, 1573, 2520
VspI	ATTAAT	1 cut(s)	1124
XapI	RAATTY	4 cut(s)	541, 571, 823, 982
XbaI	TCTAGA	1 cut(s)	1057
XceI	RCATGY	1 cut(s)	2069
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2329
XmnI	GAANNNNTTC	2 cut(s)	2045, 2154
XspI	CTAG	5 cut(s)	423, 1005, 1058, 1808, 2421
Zsp2I	ATGCAT	1 cut(s)	1902

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.