Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0002460

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG351600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGGAACAAGACTACCACGGCTCCAGAAAACGCAGGAGACAAGACGGCAACGTCGATGACCTCACCAAGCCATTCAATTTCAACAATGGCGATGGCCTTGGTCTCACTGCGGGAATCGGGATGAAGATGCTGAAGAACATGGGCTACAAAGGAGGCGGACTTGGCAAGGACGAACAGGGAATGCTCAACCCCATTCAACCCAAATTGAGGCCAAAGAATTTGGGCATGGGCTTCAACGACACCAAAACCAAGCTGCCCAATTTGCCAGAAGAATCGGAGCCCACAAAGGCTGATGTTCCTCCGCCCACCACCACCATGCCAACTTGGAAGAAGAACGTAATTAACAAGCAGCAGAAGGATTTCTGTTTGGCAGAGTTCTTGGCCCAGAAGATGGAAGAGGAACAGAATGTTGAGGCCGTCGAAAATTCGGAGAATTTGAATGCTCAGGAGGAAGATGGTGATGATGTTCCGATGCCCAATTTGAACAATGAGATCAGTGCTGTTTTGAACCGACTGAAAGAAGCAAATTCCATGGGAGAATTGACACTGGAAGCGCTGGGCAAGGAGTTTGGTGACATTCGGAGGAGTTGCACTGACCATTGTAAGTTAATTAACTTGTCTCGAATTGTGTTTTCATTTGCAAAGCCTCTGTTTAACAAGATGTTTCAGGGTTGGGATCCTCTGCAGAATCCATGGCATGGTTTCGACGTTGTATCCACCTGGAAGGGTTTGCTTCATGGAGAGGGGGAGAGAGAGGAATGTTATTATACCCAATTGGTTAAAGAGGTTGTGTTCTCTGAGGTCAGGATGTCTGGCCTCAATAGTTGGCAGGCTGAGGACCCCGAACCAATGCTCGTGTTTTTGGAGTCTTGGAAGGAGCTACTGCCCACTTCTGTTGTTCATGACATATTGGATATGGTGGTCTTGCCTGAATTGAAGGTTGCTATGCAGTTGTGGGAACCAAACTTGGGAACTGTTCCTATCCATTTGTGTGTGCATCCATGGCTACCATTACTGTTTGAATTGGGAGACAAGTATCAATTGGAGCTGGAGGAGTTGTTTGGAACAATGAGGTTGAAGTTGTGCGAATTTCTTAGCTCATGGCACCCGAGAGATGGGTCTGGTTATACCATAGTGTCACCGTGGAAAGCGGTGTTTGATTCTACCACTTGGGAACTGCTTATGCGTAGATATGTAGTTCCCAAGTTGGAGCTCGTGCTACTAGAAGATTTTGAAGTGAACCCTTTAAATCAGAAGCTTGATCAGTTTAATTGGGTCATGAGGTGGGCTTCTGCTATTCCTATGCATCTGATGGTCAATGTGATGGTGAAGGGCTTCTTCCCGAATTGGATAAAGGGTTTGCATTTCTGGTTGAAAGCCAATCCGAACTTTGAAGATGTTGCGGATTGGTATAGGGGTTGGAAGGAACTTATCCCCAAAGAGTTTCATGCGAATGAAAGTATTCGTTGTCAGCTTGAGCGTGGTCTTAGTATGATGAACCGGGCTGTTGAGGATATGGAGGCTGCTCAAGCTGATTTGAAAGAGAATTTTAGGGTAGTTGAAAAAAGGCAGGGGAAAGCAGTACCAGCAGCCCAAGCAAACTTCGGCGGCCAAACCAACATGGATGGCATTGATCATGCGATGAATTTGAAAGAGAATGGTAAGATTGATCAAGTGCAATTTGAGGCAAAGAAGAGAGCAGCAGCTTTTCTAGCCATTGCGAAATTGGGCAGCACAACTGACGTGGATGACATTAGTCATCAAATGACCCTGAAAGATGTTATTGAAGCTGAGGCGCAGGAACATGGCTTGCTATTTAGGCCTAAACCTGGGCGAATGTTTGATGGTCACCAGGTATACGGCTTTGGTAACATAAGCATAGTGGTGGACTTTCTAAAGGAGAAGATATATGCCCAAACAGAAGCGACGTGGTCTCTTGTGTCCCTTGAGAGGTTACTTGAGTTACACAAGAACAAGGAGACGATGAGTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000375 GO:0000377 GO:0000390 GO:0000398 GO:0000781 GO:0000784 GO:0003674 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022411 GO:0030154 GO:0030198 GO:0031012 GO:0031333 GO:0031974 GO:0031981 GO:0032091 GO:0032502 GO:0032984 GO:0032988 GO:0032991 GO:0034641 GO:0042752 GO:0043021 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043393 GO:0043933 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0046483 GO:0048519 GO:0048523 GO:0048869 GO:0050789 GO:0050794 GO:0051098 GO:0051100 GO:0051128 GO:0051129 GO:0065007 GO:0065009 GO:0070013 GO:0070990 GO:0071008 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0098687 GO:1901360 GO:1902494 GO:1990446 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch GCFC TIP_N

Protein Analysis

664

Amino Acids

75.95

Weight (kDa)

5.36

Isoelectric Point (pI)

34.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-patch	PF01585	37 - 77	3.2e-12	G-patch domain
G-patch_2	PF12656	39 - 80	1.9e-06	G-patch domain
GCFC	PF07842	184 - 452	6.5e-67	GC-rich sequence DNA-binding factor-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17070
fragaria_vesca	FvH4_2g25582 FvH4_5g27320
malus_domestica	MD08G1250100.v1.1 MD15G1445100.v1.1
prunus_persica	Prupe.1G587200_v2.0.a1 Prupe.5G048700_v2.0.a1
pyrus_communis	pycom08g21680 pycom15g39220
rosa_chinensis	RchiOBHm_Chr6g0293801 RchiOBHm_Chr6g0293811 RchiOBHm_Chr7g0218481
rosa_laevigata	RLG00000002370 RLG00000011921 RLG00000012034
rosa_multiflora	Rmu_co8485319.1_g000001 Rmu_sc0001301.1_g000062 Rmu_sc0001301.1_g000063 Rmu_sc0001354.1_g000013 Rmu_sc0023058.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240910 Rroxscaffold_7G00173890 Rroxscaffold_7G00175120
rosa_rugosa	Rorug06G0238200 Rorug07G0177400
rosa_samantha	Rh6AG339400 Rh6AG351600 Rh6BG346700 Rh6BG358400 Rh6CG353500 Rh6CG365600 Rh6DG339500 Rh6DG352200 Rh6DG352300 Rh7AG318900 Rh7BG310800 Rh7CG335800 Rh7DG318000
rosa_wichuraiana	Rw6G029540 Rw6G030580 Rw7G027140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	50
AccB1I	GGYRCC	1 cut(s)	1104
AccB7I	CCANNNNNTGG	2 cut(s)	391, 698
AccI	GTMKAC	1 cut(s)	1857
AciI	CCGC	6 cut(s)	110, 156, 302, 1151, 1403, 1608
AclWI	GGATC	2 cut(s)	671, 684
AcoI	YGGCCR	1 cut(s)	1609
AcsI	RAATTY	7 cut(s)	217, 424, 433, 526, 1088, 1546, 1645
AcuI	CTGAAG	1 cut(s)	152
AfaI	GTAC	1 cut(s)	1584
AfeI	AGCGCT	1 cut(s)	555
AfiI	CCNNNNNNNGG	7 cut(s)	207, 391, 698, 968, 1115, 1829, 1950
AjiI	CACGTC	2 cut(s)	1744, 1929
AjnI	CCWGG	3 cut(s)	719, 1828, 1851
Alw21I	GWGCWC	1 cut(s)	1215
Alw26I	GTCTC	6 cut(s)	31, 107, 624, 1023, 1938, 1973
AlwI	GGATC	2 cut(s)	671, 684
Ama87I	CYCGRG	1 cut(s)	1108
Aor51HI	AGCGCT	1 cut(s)	555
AoxI	GGCC	7 cut(s)	94, 209, 381, 414, 814, 1609, 1820
ApeKI	GCWGC	7 cut(s)	253, 349, 1523, 1589, 1700, 1703, 1731
ApoI	RAATTY	7 cut(s)	217, 424, 433, 526, 1088, 1546, 1645
Asp700I	GAANNNNTTC	3 cut(s)	359, 1334, 1461
AspLEI	GCGC	2 cut(s)	556, 1798
AspS9I	GGNCC	2 cut(s)	382, 838
AsuC2I	CCSGG	1 cut(s)	1502
AsuHPI	GGTGA	6 cut(s)	55, 470, 584, 1131, 1339, 1841
AvaI	CYCGRG	1 cut(s)	1108
AvaII	GGWCC	1 cut(s)	838
BamHI	GGATCC	1 cut(s)	676
BanI	GGYRCC	1 cut(s)	1104
BanII	GRGCYC	2 cut(s)	282, 1215
BauI	CACGAG	2 cut(s)	854, 1214
Bbv12I	GWGCWC	1 cut(s)	1215
BbvCI	CCTCAGC	2 cut(s)	834, 1791
BbvI	GCAGC	7 cut(s)	240, 361, 1510, 1601, 1712, 1715, 1743
BccI	CCATC	8 cut(s)	86, 385, 449, 1109, 1306, 1318, 1619, 1838
BceAI	ACGGC	4 cut(s)	34, 61, 401, 1876
BciT130I	CCWGG	3 cut(s)	721, 1830, 1853
BciVI	GTATCC	1 cut(s)	724
BclI	TGATCA	3 cut(s)	1261, 1633, 1669
BcnI	CCSGG	1 cut(s)	1502
BcoDI	GTCTC	6 cut(s)	31, 107, 624, 1023, 1938, 1973
BfaI	CTAG	2 cut(s)	1223, 1712
BfmI	CTRYAG	1 cut(s)	683
BfoI	RGCGCY	1 cut(s)	557
BfuI	GTATCC	1 cut(s)	724
BisI	GCNGC	8 cut(s)	254, 350, 1524, 1590, 1609, 1701, 1704, 1732
BlsI	GCNGC	8 cut(s)	255, 351, 1525, 1591, 1610, 1702, 1705, 1733
Bme1390I	CCNGG	4 cut(s)	721, 1502, 1830, 1853
Bme18I	GGWCC	1 cut(s)	838
BmeT110I	CYCGRG	1 cut(s)	1108
BmgBI	CACGTC	2 cut(s)	1744, 1929
BmgT120I	GGNCC	2 cut(s)	382, 838
BmiI	GGNNCC	6 cut(s)	22, 279, 678, 840, 960, 1106
BmrFI	CCNGG	4 cut(s)	721, 1502, 1830, 1853
BmsI	GCATC	4 cut(s)	117, 462, 1006, 1315
BoxI	GACNNNNGTC	1 cut(s)	1755
BpmI	CTGGAG	2 cut(s)	7, 1070
Bpu10I	CCTNAGC	3 cut(s)	444, 834, 1791
BpuEI	CTTGAG	4 cut(s)	1496, 1512, 1967, 1979
BpuMI	CCSGG	1 cut(s)	1502
BsaI	GGTCTC	2 cut(s)	107, 1938
BsaJI	CCNNGG	7 cut(s)	16, 97, 531, 692, 1001, 1142, 1829
BsaXI	ACNNNNNCTCC	4 cut(s)	5, 35, 1043, 1073
Bsc4I	CCNNNNNNNGG	7 cut(s)	207, 391, 698, 968, 1115, 1829, 1950
Bse1I	ACTGG	1 cut(s)	552
Bse3DI	GCAATG	1 cut(s)	1716
BseBI	CCWGG	3 cut(s)	721, 1830, 1853
BseDI	CCNNGG	7 cut(s)	16, 97, 531, 692, 1001, 1142, 1829
BseGI	GGATG	5 cut(s)	126, 813, 997, 1630, 1753
BseLI	CCNNNNNNNGG	7 cut(s)	207, 391, 698, 968, 1115, 1829, 1950
BseMI	GCAATG	1 cut(s)	1716
BseMII	CTCAG	4 cut(s)	458, 789, 825, 1782
BseNI	ACTGG	1 cut(s)	552
BseRI	GAGGAG	2 cut(s)	598, 1067
BseXI	GCAGC	7 cut(s)	240, 361, 1510, 1601, 1712, 1715, 1743
BseYI	CCCAGC	1 cut(s)	556
BshFI	GGCC	7 cut(s)	96, 211, 383, 416, 816, 1611, 1822
BshNI	GGYRCC	1 cut(s)	1104
BsiHKAI	GWGCWC	1 cut(s)	1215
BsiHKCI	CYCGRG	1 cut(s)	1108
BsiSI	CCGG	1 cut(s)	1501
BslFI	GGGAC	1 cut(s)	1927
BslI	CCNNNNNNNGG	7 cut(s)	207, 391, 698, 968, 1115, 1829, 1950
BsmAI	GTCTC	6 cut(s)	31, 107, 624, 1023, 1938, 1973
BsmBI	CGTCTC	1 cut(s)	1973
BsmFI	GGGAC	1 cut(s)	1927
BsmI	GAATGC	2 cut(s)	186, 445
BsnI	GGCC	7 cut(s)	96, 211, 383, 416, 816, 1611, 1822
Bso31I	GGTCTC	2 cut(s)	107, 1938
BsoBI	CYCGRG	1 cut(s)	1108
Bsp1286I	GDGCHC	2 cut(s)	282, 1215
Bsp143I	GATC	5 cut(s)	492, 676, 1261, 1633, 1669
Bsp19I	CCATGG	3 cut(s)	531, 692, 1001
BspACI	CCGC	6 cut(s)	110, 156, 302, 1151, 1403, 1608
BspANI	GGCC	7 cut(s)	96, 211, 383, 416, 816, 1611, 1822
BspCNI	CTCAG	4 cut(s)	457, 790, 826, 1783
BspHI	TCATGA	2 cut(s)	901, 1278
BspLI	GGNNCC	6 cut(s)	22, 279, 678, 840, 960, 1106
BspMAI	CTGCAG	1 cut(s)	687
BspPI	GGATC	2 cut(s)	671, 684
BspT107I	GGYRCC	1 cut(s)	1104
BspTNI	GGTCTC	2 cut(s)	107, 1938
BsrDI	GCAATG	1 cut(s)	1716
BsrI	ACTGG	1 cut(s)	552
BssECI	CCNNGG	7 cut(s)	16, 97, 531, 692, 1001, 1142, 1829
BssMI	GATC	5 cut(s)	492, 676, 1261, 1633, 1669
BssNAI	GTATAC	1 cut(s)	1858
BssSI	CACGAG	2 cut(s)	854, 1214
BssT1I	CCWWGG	4 cut(s)	97, 531, 692, 1001
Bst1107I	GTATAC	1 cut(s)	1858
Bst2BI	CACGAG	2 cut(s)	854, 1214
Bst2UI	CCWGG	3 cut(s)	721, 1830, 1853
Bst4CI	ACNGT	3 cut(s)	976, 1017, 1143
Bst6I	CTCTTC	2 cut(s)	390, 1688
BstC8I	GCNNGC	2 cut(s)	831, 1811
BstDEI	CTNAG	6 cut(s)	444, 798, 834, 1094, 1487, 1791
BstDSI	CCRYGG	5 cut(s)	16, 531, 692, 1001, 1142
BstEII	GGTNACC	1 cut(s)	1847
BstF5I	GGATG	5 cut(s)	126, 813, 997, 1630, 1753
BstH2I	RGCGCY	1 cut(s)	557
BstHHI	GCGC	2 cut(s)	556, 1798
BstKTI	GATC	5 cut(s)	495, 679, 1264, 1636, 1672
BstMAI	GTCTC	6 cut(s)	31, 107, 624, 1023, 1938, 1973
BstMBI	GATC	5 cut(s)	492, 676, 1261, 1633, 1669
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 262, 1003, 1529, 1586, 1595, 1712, 1819
BstNI	CCWGG	3 cut(s)	721, 1830, 1853
BstPAI	GACNNNNGTC	1 cut(s)	1755
BstPI	GGTNACC	1 cut(s)	1847
BstSCI	CCNGG	4 cut(s)	719, 1500, 1828, 1851
BstSFI	CTRYAG	1 cut(s)	683
BstV1I	GCAGC	7 cut(s)	240, 361, 1510, 1601, 1712, 1715, 1743
BstX2I	RGATCY	1 cut(s)	676
BstYI	RGATCY	1 cut(s)	676
BstZ17I	GTATAC	1 cut(s)	1858
BsuI	GTATCC	1 cut(s)	724
BsuRI	GGCC	7 cut(s)	96, 211, 383, 416, 816, 1611, 1822
BtgI	CCRYGG	5 cut(s)	16, 531, 692, 1001, 1142
BtgZI	GCGATG	2 cut(s)	105, 1655
BtrI	CACGTC	2 cut(s)	1744, 1929
BtsCI	GGATG	5 cut(s)	126, 813, 997, 1630, 1753
BtsI	GCAGTG	1 cut(s)	105
BtsIMutI	CAGTG	4 cut(s)	105, 502, 545, 591
Cac8I	GCNNGC	2 cut(s)	831, 1811
CciI	TCATGA	2 cut(s)	901, 1278
CfoI	GCGC	2 cut(s)	556, 1798
Cfr13I	GGNCC	2 cut(s)	382, 838
CsiI	ACCWGGT	1 cut(s)	1851
Csp6I	GTAC	1 cut(s)	1583
CspCI	CAANNNNNGTGG	4 cut(s)	877, 912, 1725, 1760
CviQI	GTAC	1 cut(s)	1583
DdeI	CTNAG	6 cut(s)	444, 798, 834, 1094, 1487, 1791
DpnI	GATC	5 cut(s)	494, 678, 1263, 1635, 1671
DpnII	GATC	5 cut(s)	492, 676, 1261, 1633, 1669
DraI	TTTAAA	1 cut(s)	1248
DrdI	GACNNNNNNGTC	1 cut(s)	50
DseDI	GACNNNNNNGTC	1 cut(s)	50
EaeI	YGGCCR	1 cut(s)	1609
Eam1104I	CTCTTC	2 cut(s)	390, 1688
EarI	CTCTTC	2 cut(s)	390, 1688
EciI	GGCGGA	2 cut(s)	171, 291
Ecl136II	GAGCTC	1 cut(s)	1213
Eco130I	CCWWGG	4 cut(s)	97, 531, 692, 1001
Eco147I	AGGCCT	1 cut(s)	1822
Eco24I	GRGCYC	2 cut(s)	282, 1215
Eco31I	GGTCTC	2 cut(s)	107, 1938
Eco47I	GGWCC	1 cut(s)	838
Eco47III	AGCGCT	1 cut(s)	555
Eco53kI	GAGCTC	1 cut(s)	1213
Eco57I	CTGAAG	1 cut(s)	152
Eco88I	CYCGRG	1 cut(s)	1108
Eco91I	GGTNACC	1 cut(s)	1847
EcoICRI	GAGCTC	1 cut(s)	1213
EcoO109I	RGGNCCY	1 cut(s)	838
EcoO65I	GGTNACC	1 cut(s)	1847
EcoRII	CCWGG	3 cut(s)	719, 1828, 1851
EcoT14I	CCWWGG	4 cut(s)	97, 531, 692, 1001
EcoT22I	ATGCAT	1 cut(s)	1308
EcoT38I	GRGCYC	2 cut(s)	282, 1215
ErhI	CCWWGG	4 cut(s)	97, 531, 692, 1001
Esp3I	CGTCTC	1 cut(s)	1973
FalI	AAGNNNNNCTT	2 cut(s)	1322, 1354
FaqI	GGGAC	1 cut(s)	1927
FauI	CCCGC	1 cut(s)	103
FbaI	TGATCA	3 cut(s)	1261, 1633, 1669
FblI	GTMKAC	1 cut(s)	1857
Fnu4HI	GCNGC	8 cut(s)	254, 350, 1524, 1590, 1609, 1701, 1704, 1732
FokI	GGATG	5 cut(s)	133, 820, 984, 1637, 1760
FriOI	GRGCYC	2 cut(s)	282, 1215
Fsp4HI	GCNGC	8 cut(s)	254, 350, 1524, 1590, 1609, 1701, 1704, 1732
FspBI	CTAG	2 cut(s)	1223, 1712
GlaI	GCGC	2 cut(s)	555, 1797
GluI	GCNGC	8 cut(s)	254, 350, 1524, 1590, 1609, 1701, 1704, 1732
GsaI	CCCAGC	1 cut(s)	560
GsuI	CTGGAG	2 cut(s)	7, 1070
HaeII	RGCGCY	1 cut(s)	557
HaeIII	GGCC	7 cut(s)	96, 211, 383, 416, 816, 1611, 1822
HapII	CCGG	1 cut(s)	1501
HhaI	GCGC	2 cut(s)	556, 1798
Hin6I	GCGC	2 cut(s)	554, 1796
HinP1I	GCGC	2 cut(s)	554, 1796
HindIII	AAGCTT	1 cut(s)	1256
HinfI	GANTC	5 cut(s)	114, 272, 688, 866, 1160
HpaII	CCGG	1 cut(s)	1501
HphI	GGTGA	6 cut(s)	55, 470, 584, 1131, 1339, 1841
Hpy166II	GTNNAC	3 cut(s)	1240, 1858, 1888
Hpy188I	TCNGA	9 cut(s)	277, 430, 471, 582, 799, 1254, 1311, 1386, 1994
Hpy188III	TCNNGA	8 cut(s)	24, 118, 446, 621, 805, 902, 1279, 1342
Hpy8I	GTNNAC	3 cut(s)	1240, 1858, 1888
Hpy99I	CGWCG	4 cut(s)	56, 422, 710, 1930
HpyAV	CCTTC	6 cut(s)	349, 718, 868, 931, 1324, 1417
HpyCH4III	ACNGT	3 cut(s)	976, 1017, 1143
HpyCH4IV	ACGT	5 cut(s)	51, 336, 708, 1743, 1928
HpyCH4V	TGCA	8 cut(s)	591, 641, 685, 949, 997, 1306, 1363, 1678
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 262, 1003, 1529, 1586, 1595, 1712, 1819
HpyF3I	CTNAG	6 cut(s)	444, 798, 834, 1094, 1487, 1791
HpySE526I	ACGT	5 cut(s)	51, 336, 708, 1743, 1928
HspAI	GCGC	2 cut(s)	554, 1796
Ksp22I	TGATCA	3 cut(s)	1261, 1633, 1669
Kzo9I	GATC	5 cut(s)	492, 676, 1261, 1633, 1669
LmnI	GCTCC	5 cut(s)	26, 277, 877, 1045, 1210
Lsp1109I	GCAGC	7 cut(s)	240, 361, 1510, 1601, 1712, 1715, 1743
LweI	GCATC	4 cut(s)	117, 462, 1006, 1315
MabI	ACCWGGT	1 cut(s)	1851
MaeI	CTAG	2 cut(s)	1223, 1712
MaeII	ACGT	5 cut(s)	51, 336, 708, 1743, 1928
MaeIII	GTNAC	6 cut(s)	572, 1137, 1847, 1868, 1953, 1962
MalI	GATC	5 cut(s)	494, 678, 1263, 1635, 1671
MboI	GATC	5 cut(s)	492, 676, 1261, 1633, 1669
MfeI	CAATTG	2 cut(s)	773, 1040
MflI	RGATCY	1 cut(s)	676
MhlI	GDGCHC	2 cut(s)	282, 1215
MlyI	GAGTC	1 cut(s)	875
MmeI	TCCRAC	2 cut(s)	1188, 1400
Mph1103I	ATGCAT	1 cut(s)	1308
MroXI	GAANNNNTTC	3 cut(s)	359, 1334, 1461
MseI	TTAA	7 cut(s)	342, 608, 612, 654, 780, 1247, 1269
MslI	CAYNNNNRTG	4 cut(s)	314, 990, 1452, 1883
MspI	CCGG	1 cut(s)	1501
MspR9I	CCNGG	4 cut(s)	721, 1502, 1830, 1853
MunI	CAATTG	2 cut(s)	773, 1040
Mva1269I	GAATGC	2 cut(s)	186, 445
MvaI	CCWGG	3 cut(s)	721, 1830, 1853
MwoI	GCNNNNNNNGC	8 cut(s)	162, 262, 1003, 1529, 1586, 1595, 1712, 1819
NciI	CCSGG	1 cut(s)	1502
NcoI	CCATGG	3 cut(s)	531, 692, 1001
NdeII	GATC	5 cut(s)	492, 676, 1261, 1633, 1669
NlaIV	GGNNCC	6 cut(s)	22, 279, 678, 840, 960, 1106
NmuCI	GTSAC	3 cut(s)	572, 1137, 1847
NsiI	ATGCAT	1 cut(s)	1308
PacI	TTAATTAA	1 cut(s)	612
PagI	TCATGA	2 cut(s)	901, 1278
PceI	AGGCCT	1 cut(s)	1822
PcsI	WCGNNNNNNNCGW	1 cut(s)	51
PctI	GAATGC	2 cut(s)	186, 445
PdmI	GAANNNNTTC	3 cut(s)	359, 1334, 1461
PfeI	GAWTC	4 cut(s)	114, 272, 688, 1160
PflFI	GACNNNGTC	1 cut(s)	1930
PflMI	CCANNNNNTGG	2 cut(s)	391, 698
PkrI	GCNGC	8 cut(s)	255, 351, 1525, 1591, 1610, 1702, 1705, 1733
PleI	GAGTC	1 cut(s)	874
PpsI	GAGTC	1 cut(s)	874
PpuMI	RGGWCCY	1 cut(s)	838
PshAI	GACNNNNGTC	1 cut(s)	1755
Psp124BI	GAGCTC	1 cut(s)	1215
Psp5II	RGGWCCY	1 cut(s)	838
Psp6I	CCWGG	3 cut(s)	719, 1828, 1851
PspEI	GGTNACC	1 cut(s)	1847
PspFI	CCCAGC	1 cut(s)	556
PspGI	CCWGG	3 cut(s)	719, 1828, 1851
PspN4I	GGNNCC	6 cut(s)	22, 279, 678, 840, 960, 1106
PspPI	GGNCC	2 cut(s)	382, 838
PspPPI	RGGWCCY	1 cut(s)	838
PsrI	GAACNNNNNNTAC	2 cut(s)	128, 160
PstI	CTGCAG	1 cut(s)	687
PsuI	RGATCY	1 cut(s)	676
PsyI	GACNNNGTC	1 cut(s)	1930
RsaI	GTAC	1 cut(s)	1584
RsaNI	GTAC	1 cut(s)	1583
RseI	CAYNNNNRTG	4 cut(s)	314, 990, 1452, 1883
SacI	GAGCTC	1 cut(s)	1215
SaqAI	TTAA	7 cut(s)	342, 608, 612, 654, 780, 1247, 1269
SatI	GCNGC	8 cut(s)	254, 350, 1524, 1590, 1609, 1701, 1704, 1732
Sau3AI	GATC	5 cut(s)	492, 676, 1261, 1633, 1669
Sau96I	GGNCC	2 cut(s)	382, 838
SchI	GAGTC	1 cut(s)	875
ScrFI	CCNGG	4 cut(s)	721, 1502, 1830, 1853
SduI	GDGCHC	2 cut(s)	282, 1215
SexAI	ACCWGGT	1 cut(s)	1851
SfaNI	GCATC	4 cut(s)	117, 462, 1006, 1315
SfcI	CTRYAG	1 cut(s)	683
SinI	GGWCC	1 cut(s)	838
SmiMI	CAYNNNNRTG	4 cut(s)	314, 990, 1452, 1883
SmlI	CTYRAG	4 cut(s)	1475, 1527, 1946, 1958
SmoI	CTYRAG	4 cut(s)	1475, 1527, 1946, 1958
SseBI	AGGCCT	1 cut(s)	1822
SsiI	CCGC	6 cut(s)	110, 156, 302, 1151, 1403, 1608
SspMI	CTAG	2 cut(s)	1223, 1712
SstI	GAGCTC	1 cut(s)	1215
StuI	AGGCCT	1 cut(s)	1822
StyD4I	CCNGG	4 cut(s)	719, 1500, 1828, 1851
StyI	CCWWGG	4 cut(s)	97, 531, 692, 1001
TaaI	ACNGT	3 cut(s)	976, 1017, 1143
TaiI	ACGT	5 cut(s)	54, 339, 711, 1746, 1931
TaqI	TCGA	4 cut(s)	54, 420, 622, 705
TauI	GCSGC	1 cut(s)	1611
TfiI	GAWTC	4 cut(s)	114, 272, 688, 1160
Tru1I	TTAA	7 cut(s)	342, 608, 612, 654, 780, 1247, 1269
Tru9I	TTAA	7 cut(s)	342, 608, 612, 654, 780, 1247, 1269
TscAI	CASTG	4 cut(s)	112, 502, 552, 598
TseFI	GTSAC	3 cut(s)	572, 1137, 1847
TseI	GCWGC	7 cut(s)	253, 349, 1523, 1589, 1700, 1703, 1731
Tsp45I	GTSAC	3 cut(s)	572, 1137, 1847
TspDTI	ATGAA	8 cut(s)	137, 624, 725, 890, 1436, 1470, 1511, 1658
TspRI	CASTG	4 cut(s)	112, 502, 552, 598
Tth111I	GACNNNGTC	1 cut(s)	1930
Van91I	CCANNNNNTGG	2 cut(s)	391, 698
VpaK11BI	GGWCC	1 cut(s)	838
XapI	RAATTY	7 cut(s)	217, 424, 433, 526, 1088, 1546, 1645
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1723
XmiI	GTMKAC	1 cut(s)	1857
XmnI	GAANNNNTTC	3 cut(s)	359, 1334, 1461
XspI	CTAG	2 cut(s)	1223, 1712
Zsp2I	ATGCAT	1 cut(s)	1308

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.