Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0002460

Physical Location & Seq

Genomic Coordinates Reverse (-)

54677217 .. 54679630

Gene Structure 2414 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G030580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGAACAAGACTACCACAGCTCCAGAAAACGCAGGAGACAAGACGGCAACGTCGATGACCTCACCAAGCCATTCAATTTCAACAATGGCGATGGCCTTGGTCTCACTGCGGGAATCGGGATGAAGATGCTGAAGAACATGGGCTACAAAGGAGGCGGTCTTGGCAAGGACGAACAGGGAATGCTCAACCCCATTCAACCCAAATTGAGGCCAAAGAATTTGGGCATGGGCTTCAACGACACCAAAACCAAGCTGCCCAATTTGCAAGAAGAATCGGAGCCCACAAAGGCTGATGTTCCTCCGCCCACCACCACCACCACCACCATGCCAACTTGGAAGAAGAACGTAATTAACAAGCAGCAGAAGGATTTCTGTTTGGCAGAGTTCTTGGCCCAGAAGATGGAAGAGGAACAGAATGTTGAGGCCGTCGAAAATTCGGAGAATTTGAATGCTCAGGAGGAAGATGGTGATGATGTTCCGATGCCCAATTTGAACAATGAGATCAGTGCTGTTTTGAACCGACTGAAAGAAGCAAATTCCATGGGAGAATTGACACTGGAAGCGCTGGGCAAGGAGTTTGGTGACATTCGGAGGAGTTGCACTGACCATTGTAAGTTAATTAACTTGTCTCGAATTGTGTTTTCATTTGCAAAGCCTCTGTTTAACAAGATGTTTCAGGGTTGGGATCCTCTGCAGAATCCATGGCATGGTTTCGACGTTGTATCCACCTGGAAGGGTTTGCTTCATGGAGAGGGGGAGAGAGAGGAATGTTATTATACCCAATTGGTTAAAGAGGTTGTGTTCTCTGAGGTCAGGATGTCTGGCCTCAATAGTTGGCAGGCTGAGGACCCCGAACCAATGCTCGTGTTTTTGGAGTCTTGGAAGGAGCTACTGCCCACTTCTGTTGTTCATGACATATTGGATATGGTGGTCTTGCCTGAATTGAAGGTTGCTATGCAGTTGTGGGAACCAAACTTGGGAACTGTTCCTATCCATTTGTGTGTGCATCCATGGCTACCATTACTGTTTGAATTGGGAGACAAGTATCAATTGGAGCTGGAGGAGTTGTTTGGAACAATGAGGTTGAAGTTGTGCGAATTTCTTAGCTCATGGCACCCGAGAGATGGGTCTGGTTATACCATAGTGTCACCGTGGAAAGCGGTGTTTGATTCTACCACTTGGGAACTGCTTATGCGTAGATATGTAGTTCCCAAGTTGGAGCTCGTGCTACTAGAAGATTTTGAAGTGAACCCTTTAAATCAGAAGCTTGATCAGTTTAATTGGGTCATGAGGTGGGCTTCTGCTATTCCTATGCATCTGATGGTCAATGTGATGGTGAAGGGCTTCTTCCCGAATTGGATAAAGGGTTTGCATTTCTGGTTGAAAGCCAATCCGAACTTTGAAGATGTTGCGGATTGGTATAGGGGTTGGAAGGAACTTATCCCCAAAGAGTTTCATGCGAATGAAAGTATTCGTTGTCAGCTTGAGCGTGGTCTTAGTATGATGAACCGGGCTGTTGAGGATATGGAGGCTGCTCAAGCTGATTTGAAAGAGAATTTTAGGGTAGTTGAAAAAAGGCAGGGGAAAGCAGTACCAGCAGCCCAAGCAAACTTCGGCGGCCAAACCAACATGGATGGCATTGATCATGCGATGAATTTGAAAGAGAATGGTAAGATTGATCAAGTGCAATTTGAGGCAAAGAAGAGAGCAGCAGCTTTTCTAGCCATTGCGAAATTGGGCAGCACAACTGACGTGGATGACATTAGTCATCAAATGACCCTGAAAGATGTTATTGAAGCTGAGGCGCAGGAACATGGCTTGCTATTTAGGCCTAAACCTGGGCGAATGTTTGATGGTCACCAGGTATACGGCTTTGGTAACATAAGCATAGTGGTGGACTTTCTAAAGGAGAAGATATATGCCCAAACAGAAGCGACGTGGTCTCTTGTGTCCCTTGAGAGGTTACTTGAGTTACACAAGAACAAGGAGACGATGAGTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000375 GO:0000377 GO:0000390 GO:0000398 GO:0000781 GO:0000784 GO:0003674 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022411 GO:0030154 GO:0030198 GO:0031012 GO:0031333 GO:0031974 GO:0031981 GO:0032091 GO:0032502 GO:0032984 GO:0032988 GO:0032991 GO:0034641 GO:0042752 GO:0043021 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043393 GO:0043933 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0046483 GO:0048519 GO:0048523 GO:0048869 GO:0050789 GO:0050794 GO:0051098 GO:0051100 GO:0051128 GO:0051129 GO:0065007 GO:0065009 GO:0070013 GO:0070990 GO:0071008 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0098687 GO:1901360 GO:1902494 GO:1990446 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch GCFC TIP_N

Protein Analysis

667

Amino Acids

76.31

Weight (kDa)

5.36

Isoelectric Point (pI)

35.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-patch	PF01585	37 - 77	3.2e-12	G-patch domain
G-patch_2	PF12656	39 - 80	1.9e-06	G-patch domain
GCFC	PF07842	187 - 455	6.6e-67	GC-rich sequence DNA-binding factor-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17070
fragaria_vesca	FvH4_2g25582 FvH4_5g27320
malus_domestica	MD08G1250100.v1.1 MD15G1445100.v1.1
prunus_persica	Prupe.1G587200_v2.0.a1 Prupe.5G048700_v2.0.a1
pyrus_communis	pycom08g21680 pycom15g39220
rosa_chinensis	RchiOBHm_Chr6g0293801 RchiOBHm_Chr6g0293811 RchiOBHm_Chr7g0218481
rosa_laevigata	RLG00000002370 RLG00000011921 RLG00000012034
rosa_multiflora	Rmu_co8485319.1_g000001 Rmu_sc0001301.1_g000062 Rmu_sc0001301.1_g000063 Rmu_sc0001354.1_g000013 Rmu_sc0023058.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240910 Rroxscaffold_7G00173890 Rroxscaffold_7G00175120
rosa_rugosa	Rorug06G0238200 Rorug07G0177400
rosa_samantha	Rh6AG339400 Rh6AG351600 Rh6BG346700 Rh6BG358400 Rh6CG353500 Rh6CG365600 Rh6DG339500 Rh6DG352200 Rh6DG352300 Rh7AG318900 Rh7BG310800 Rh7CG335800 Rh7DG318000
rosa_wichuraiana	Rw6G029540 Rw6G030580 Rw7G027140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	50
AccB1I	GGYRCC	1 cut(s)	1113
AccB7I	CCANNNNNTGG	2 cut(s)	400, 707
AccI	GTMKAC	1 cut(s)	1866
AciI	CCGC	6 cut(s)	110, 156, 302, 1160, 1412, 1617
AclWI	GGATC	2 cut(s)	680, 693
AcoI	YGGCCR	1 cut(s)	1618
AcsI	RAATTY	7 cut(s)	217, 433, 442, 535, 1097, 1555, 1654
AcuI	CTGAAG	1 cut(s)	152
AfaI	GTAC	1 cut(s)	1593
AfeI	AGCGCT	1 cut(s)	564
AfiI	CCNNNNNNNGG	7 cut(s)	207, 400, 707, 977, 1124, 1838, 1959
AjiI	CACGTC	2 cut(s)	1753, 1938
AjnI	CCWGG	3 cut(s)	728, 1837, 1860
Alw21I	GWGCWC	1 cut(s)	1224
Alw26I	GTCTC	6 cut(s)	31, 107, 633, 1032, 1947, 1982
AlwI	GGATC	2 cut(s)	680, 693
Ama87I	CYCGRG	1 cut(s)	1117
Aor51HI	AGCGCT	1 cut(s)	564
AoxI	GGCC	7 cut(s)	94, 209, 390, 423, 823, 1618, 1829
ApeKI	GCWGC	7 cut(s)	253, 358, 1532, 1598, 1709, 1712, 1740
ApoI	RAATTY	7 cut(s)	217, 433, 442, 535, 1097, 1555, 1654
Asp700I	GAANNNNTTC	3 cut(s)	368, 1343, 1470
AspLEI	GCGC	2 cut(s)	565, 1807
AspS9I	GGNCC	2 cut(s)	391, 847
AsuC2I	CCSGG	1 cut(s)	1511
AsuHPI	GGTGA	6 cut(s)	55, 479, 593, 1140, 1348, 1850
AvaI	CYCGRG	1 cut(s)	1117
AvaII	GGWCC	1 cut(s)	847
BamHI	GGATCC	1 cut(s)	685
BanI	GGYRCC	1 cut(s)	1113
BanII	GRGCYC	2 cut(s)	282, 1224
BauI	CACGAG	2 cut(s)	863, 1223
Bbv12I	GWGCWC	1 cut(s)	1224
BbvCI	CCTCAGC	2 cut(s)	843, 1800
BbvI	GCAGC	7 cut(s)	240, 370, 1519, 1610, 1721, 1724, 1752
BccI	CCATC	8 cut(s)	86, 394, 458, 1118, 1315, 1327, 1628, 1847
BceAI	ACGGC	3 cut(s)	61, 410, 1885
BciT130I	CCWGG	3 cut(s)	730, 1839, 1862
BciVI	GTATCC	1 cut(s)	733
BclI	TGATCA	3 cut(s)	1270, 1642, 1678
BcnI	CCSGG	1 cut(s)	1511
BcoDI	GTCTC	6 cut(s)	31, 107, 633, 1032, 1947, 1982
BfaI	CTAG	2 cut(s)	1232, 1721
BfmI	CTRYAG	1 cut(s)	692
BfoI	RGCGCY	1 cut(s)	566
BfuI	GTATCC	1 cut(s)	733
BisI	GCNGC	8 cut(s)	254, 359, 1533, 1599, 1618, 1710, 1713, 1741
BlsI	GCNGC	8 cut(s)	255, 360, 1534, 1600, 1619, 1711, 1714, 1742
Bme1390I	CCNGG	4 cut(s)	730, 1511, 1839, 1862
Bme18I	GGWCC	1 cut(s)	847
BmeT110I	CYCGRG	1 cut(s)	1117
BmgBI	CACGTC	2 cut(s)	1753, 1938
BmgT120I	GGNCC	2 cut(s)	391, 847
BmiI	GGNNCC	5 cut(s)	279, 687, 849, 969, 1115
BmrFI	CCNGG	4 cut(s)	730, 1511, 1839, 1862
BmsI	GCATC	4 cut(s)	117, 471, 1015, 1324
BoxI	GACNNNNGTC	1 cut(s)	1764
BpmI	CTGGAG	2 cut(s)	7, 1079
Bpu10I	CCTNAGC	3 cut(s)	453, 843, 1800
BpuEI	CTTGAG	4 cut(s)	1505, 1521, 1976, 1988
BpuMI	CCSGG	1 cut(s)	1511
BsaI	GGTCTC	2 cut(s)	107, 1947
BsaJI	CCNNGG	6 cut(s)	97, 540, 701, 1010, 1151, 1838
BsaXI	ACNNNNNCTCC	4 cut(s)	5, 35, 1052, 1082
Bsc4I	CCNNNNNNNGG	7 cut(s)	207, 400, 707, 977, 1124, 1838, 1959
Bse1I	ACTGG	1 cut(s)	561
Bse3DI	GCAATG	1 cut(s)	1725
BseBI	CCWGG	3 cut(s)	730, 1839, 1862
BseDI	CCNNGG	6 cut(s)	97, 540, 701, 1010, 1151, 1838
BseGI	GGATG	5 cut(s)	126, 822, 1006, 1639, 1762
BseLI	CCNNNNNNNGG	7 cut(s)	207, 400, 707, 977, 1124, 1838, 1959
BseMI	GCAATG	1 cut(s)	1725
BseMII	CTCAG	4 cut(s)	467, 798, 834, 1791
BseNI	ACTGG	1 cut(s)	561
BseRI	GAGGAG	2 cut(s)	607, 1076
BseXI	GCAGC	7 cut(s)	240, 370, 1519, 1610, 1721, 1724, 1752
BseYI	CCCAGC	1 cut(s)	565
BshFI	GGCC	7 cut(s)	96, 211, 392, 425, 825, 1620, 1831
BshNI	GGYRCC	1 cut(s)	1113
BsiHKAI	GWGCWC	1 cut(s)	1224
BsiHKCI	CYCGRG	1 cut(s)	1117
BsiSI	CCGG	1 cut(s)	1510
BslFI	GGGAC	1 cut(s)	1936
BslI	CCNNNNNNNGG	7 cut(s)	207, 400, 707, 977, 1124, 1838, 1959
BsmAI	GTCTC	6 cut(s)	31, 107, 633, 1032, 1947, 1982
BsmBI	CGTCTC	1 cut(s)	1982
BsmFI	GGGAC	1 cut(s)	1936
BsmI	GAATGC	2 cut(s)	186, 454
BsnI	GGCC	7 cut(s)	96, 211, 392, 425, 825, 1620, 1831
Bso31I	GGTCTC	2 cut(s)	107, 1947
BsoBI	CYCGRG	1 cut(s)	1117
Bsp1286I	GDGCHC	2 cut(s)	282, 1224
Bsp143I	GATC	5 cut(s)	501, 685, 1270, 1642, 1678
Bsp19I	CCATGG	3 cut(s)	540, 701, 1010
BspACI	CCGC	6 cut(s)	110, 156, 302, 1160, 1412, 1617
BspANI	GGCC	7 cut(s)	96, 211, 392, 425, 825, 1620, 1831
BspCNI	CTCAG	4 cut(s)	466, 799, 835, 1792
BspHI	TCATGA	2 cut(s)	910, 1287
BspLI	GGNNCC	5 cut(s)	279, 687, 849, 969, 1115
BspMAI	CTGCAG	1 cut(s)	696
BspPI	GGATC	2 cut(s)	680, 693
BspT107I	GGYRCC	1 cut(s)	1113
BspTNI	GGTCTC	2 cut(s)	107, 1947
BsrDI	GCAATG	1 cut(s)	1725
BsrI	ACTGG	1 cut(s)	561
BssECI	CCNNGG	6 cut(s)	97, 540, 701, 1010, 1151, 1838
BssMI	GATC	5 cut(s)	501, 685, 1270, 1642, 1678
BssNAI	GTATAC	1 cut(s)	1867
BssSI	CACGAG	2 cut(s)	863, 1223
BssT1I	CCWWGG	4 cut(s)	97, 540, 701, 1010
Bst1107I	GTATAC	1 cut(s)	1867
Bst2BI	CACGAG	2 cut(s)	863, 1223
Bst2UI	CCWGG	3 cut(s)	730, 1839, 1862
Bst4CI	ACNGT	3 cut(s)	985, 1026, 1152
Bst6I	CTCTTC	2 cut(s)	399, 1697
BstC8I	GCNNGC	2 cut(s)	840, 1820
BstDEI	CTNAG	6 cut(s)	453, 807, 843, 1103, 1496, 1800
BstDSI	CCRYGG	4 cut(s)	540, 701, 1010, 1151
BstEII	GGTNACC	1 cut(s)	1856
BstF5I	GGATG	5 cut(s)	126, 822, 1006, 1639, 1762
BstH2I	RGCGCY	1 cut(s)	566
BstHHI	GCGC	2 cut(s)	565, 1807
BstKTI	GATC	5 cut(s)	504, 688, 1273, 1645, 1681
BstMAI	GTCTC	6 cut(s)	31, 107, 633, 1032, 1947, 1982
BstMBI	GATC	5 cut(s)	501, 685, 1270, 1642, 1678
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 262, 1012, 1538, 1595, 1604, 1721, 1828
BstNI	CCWGG	3 cut(s)	730, 1839, 1862
BstPAI	GACNNNNGTC	1 cut(s)	1764
BstPI	GGTNACC	1 cut(s)	1856
BstSCI	CCNGG	4 cut(s)	728, 1509, 1837, 1860
BstSFI	CTRYAG	1 cut(s)	692
BstV1I	GCAGC	7 cut(s)	240, 370, 1519, 1610, 1721, 1724, 1752
BstX2I	RGATCY	1 cut(s)	685
BstYI	RGATCY	1 cut(s)	685
BstZ17I	GTATAC	1 cut(s)	1867
BsuI	GTATCC	1 cut(s)	733
BsuRI	GGCC	7 cut(s)	96, 211, 392, 425, 825, 1620, 1831
BtgI	CCRYGG	4 cut(s)	540, 701, 1010, 1151
BtgZI	GCGATG	2 cut(s)	105, 1664
BtrI	CACGTC	2 cut(s)	1753, 1938
BtsCI	GGATG	5 cut(s)	126, 822, 1006, 1639, 1762
BtsI	GCAGTG	1 cut(s)	105
BtsIMutI	CAGTG	4 cut(s)	105, 511, 554, 600
Cac8I	GCNNGC	2 cut(s)	840, 1820
CciI	TCATGA	2 cut(s)	910, 1287
CfoI	GCGC	2 cut(s)	565, 1807
Cfr13I	GGNCC	2 cut(s)	391, 847
CsiI	ACCWGGT	1 cut(s)	1860
Csp6I	GTAC	1 cut(s)	1592
CspCI	CAANNNNNGTGG	4 cut(s)	886, 921, 1734, 1769
CviQI	GTAC	1 cut(s)	1592
DdeI	CTNAG	6 cut(s)	453, 807, 843, 1103, 1496, 1800
DpnI	GATC	5 cut(s)	503, 687, 1272, 1644, 1680
DpnII	GATC	5 cut(s)	501, 685, 1270, 1642, 1678
DraI	TTTAAA	1 cut(s)	1257
DrdI	GACNNNNNNGTC	1 cut(s)	50
DseDI	GACNNNNNNGTC	1 cut(s)	50
EaeI	YGGCCR	1 cut(s)	1618
Eam1104I	CTCTTC	2 cut(s)	399, 1697
EarI	CTCTTC	2 cut(s)	399, 1697
EciI	GGCGGA	1 cut(s)	291
Ecl136II	GAGCTC	1 cut(s)	1222
Eco130I	CCWWGG	4 cut(s)	97, 540, 701, 1010
Eco147I	AGGCCT	1 cut(s)	1831
Eco24I	GRGCYC	2 cut(s)	282, 1224
Eco31I	GGTCTC	2 cut(s)	107, 1947
Eco47I	GGWCC	1 cut(s)	847
Eco47III	AGCGCT	1 cut(s)	564
Eco53kI	GAGCTC	1 cut(s)	1222
Eco57I	CTGAAG	1 cut(s)	152
Eco88I	CYCGRG	1 cut(s)	1117
Eco91I	GGTNACC	1 cut(s)	1856
EcoICRI	GAGCTC	1 cut(s)	1222
EcoO109I	RGGNCCY	1 cut(s)	847
EcoO65I	GGTNACC	1 cut(s)	1856
EcoRII	CCWGG	3 cut(s)	728, 1837, 1860
EcoT14I	CCWWGG	4 cut(s)	97, 540, 701, 1010
EcoT22I	ATGCAT	1 cut(s)	1317
EcoT38I	GRGCYC	2 cut(s)	282, 1224
ErhI	CCWWGG	4 cut(s)	97, 540, 701, 1010
Esp3I	CGTCTC	1 cut(s)	1982
FalI	AAGNNNNNCTT	2 cut(s)	1331, 1363
FaqI	GGGAC	1 cut(s)	1936
FauI	CCCGC	1 cut(s)	103
FbaI	TGATCA	3 cut(s)	1270, 1642, 1678
FblI	GTMKAC	1 cut(s)	1866
Fnu4HI	GCNGC	8 cut(s)	254, 359, 1533, 1599, 1618, 1710, 1713, 1741
FokI	GGATG	5 cut(s)	133, 829, 993, 1646, 1769
FriOI	GRGCYC	2 cut(s)	282, 1224
Fsp4HI	GCNGC	8 cut(s)	254, 359, 1533, 1599, 1618, 1710, 1713, 1741
FspBI	CTAG	2 cut(s)	1232, 1721
GlaI	GCGC	2 cut(s)	564, 1806
GluI	GCNGC	8 cut(s)	254, 359, 1533, 1599, 1618, 1710, 1713, 1741
GsaI	CCCAGC	1 cut(s)	569
GsuI	CTGGAG	2 cut(s)	7, 1079
HaeII	RGCGCY	1 cut(s)	566
HaeIII	GGCC	7 cut(s)	96, 211, 392, 425, 825, 1620, 1831
HapII	CCGG	1 cut(s)	1510
HhaI	GCGC	2 cut(s)	565, 1807
Hin6I	GCGC	2 cut(s)	563, 1805
HinP1I	GCGC	2 cut(s)	563, 1805
HindIII	AAGCTT	1 cut(s)	1265
HinfI	GANTC	5 cut(s)	114, 272, 697, 875, 1169
HpaII	CCGG	1 cut(s)	1510
HphI	GGTGA	6 cut(s)	55, 479, 593, 1140, 1348, 1850
Hpy166II	GTNNAC	3 cut(s)	1249, 1867, 1897
Hpy188I	TCNGA	9 cut(s)	277, 439, 480, 591, 808, 1263, 1320, 1395, 2003
Hpy188III	TCNNGA	8 cut(s)	24, 118, 455, 630, 814, 911, 1288, 1351
Hpy8I	GTNNAC	3 cut(s)	1249, 1867, 1897
Hpy99I	CGWCG	4 cut(s)	56, 431, 719, 1939
HpyAV	CCTTC	6 cut(s)	358, 727, 877, 940, 1333, 1426
HpyCH4III	ACNGT	3 cut(s)	985, 1026, 1152
HpyCH4IV	ACGT	5 cut(s)	51, 345, 717, 1752, 1937
HpyCH4V	TGCA	9 cut(s)	265, 600, 650, 694, 958, 1006, 1315, 1372, 1687
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 262, 1012, 1538, 1595, 1604, 1721, 1828
HpyF3I	CTNAG	6 cut(s)	453, 807, 843, 1103, 1496, 1800
HpySE526I	ACGT	5 cut(s)	51, 345, 717, 1752, 1937
HspAI	GCGC	2 cut(s)	563, 1805
Ksp22I	TGATCA	3 cut(s)	1270, 1642, 1678
Kzo9I	GATC	5 cut(s)	501, 685, 1270, 1642, 1678
LmnI	GCTCC	5 cut(s)	26, 277, 886, 1054, 1219
Lsp1109I	GCAGC	7 cut(s)	240, 370, 1519, 1610, 1721, 1724, 1752
LweI	GCATC	4 cut(s)	117, 471, 1015, 1324
MabI	ACCWGGT	1 cut(s)	1860
MaeI	CTAG	2 cut(s)	1232, 1721
MaeII	ACGT	5 cut(s)	51, 345, 717, 1752, 1937
MaeIII	GTNAC	6 cut(s)	581, 1146, 1856, 1877, 1962, 1971
MalI	GATC	5 cut(s)	503, 687, 1272, 1644, 1680
MboI	GATC	5 cut(s)	501, 685, 1270, 1642, 1678
MfeI	CAATTG	2 cut(s)	782, 1049
MflI	RGATCY	1 cut(s)	685
MhlI	GDGCHC	2 cut(s)	282, 1224
MlyI	GAGTC	1 cut(s)	884
MmeI	TCCRAC	2 cut(s)	1197, 1409
Mph1103I	ATGCAT	1 cut(s)	1317
MroXI	GAANNNNTTC	3 cut(s)	368, 1343, 1470
MseI	TTAA	7 cut(s)	351, 617, 621, 663, 789, 1256, 1278
MslI	CAYNNNNRTG	4 cut(s)	323, 999, 1461, 1892
MspI	CCGG	1 cut(s)	1510
MspR9I	CCNGG	4 cut(s)	730, 1511, 1839, 1862
MunI	CAATTG	2 cut(s)	782, 1049
Mva1269I	GAATGC	2 cut(s)	186, 454
MvaI	CCWGG	3 cut(s)	730, 1839, 1862
MwoI	GCNNNNNNNGC	8 cut(s)	162, 262, 1012, 1538, 1595, 1604, 1721, 1828
NciI	CCSGG	1 cut(s)	1511
NcoI	CCATGG	3 cut(s)	540, 701, 1010
NdeII	GATC	5 cut(s)	501, 685, 1270, 1642, 1678
NlaIV	GGNNCC	5 cut(s)	279, 687, 849, 969, 1115
NmuCI	GTSAC	3 cut(s)	581, 1146, 1856
NsiI	ATGCAT	1 cut(s)	1317
PacI	TTAATTAA	1 cut(s)	621
PagI	TCATGA	2 cut(s)	910, 1287
PceI	AGGCCT	1 cut(s)	1831
PcsI	WCGNNNNNNNCGW	1 cut(s)	51
PctI	GAATGC	2 cut(s)	186, 454
PdmI	GAANNNNTTC	3 cut(s)	368, 1343, 1470
PfeI	GAWTC	4 cut(s)	114, 272, 697, 1169
PflFI	GACNNNGTC	1 cut(s)	1939
PflMI	CCANNNNNTGG	2 cut(s)	400, 707
PkrI	GCNGC	8 cut(s)	255, 360, 1534, 1600, 1619, 1711, 1714, 1742
PleI	GAGTC	1 cut(s)	883
PpsI	GAGTC	1 cut(s)	883
PpuMI	RGGWCCY	1 cut(s)	847
PshAI	GACNNNNGTC	1 cut(s)	1764
Psp124BI	GAGCTC	1 cut(s)	1224
Psp5II	RGGWCCY	1 cut(s)	847
Psp6I	CCWGG	3 cut(s)	728, 1837, 1860
PspEI	GGTNACC	1 cut(s)	1856
PspFI	CCCAGC	1 cut(s)	565
PspGI	CCWGG	3 cut(s)	728, 1837, 1860
PspN4I	GGNNCC	5 cut(s)	279, 687, 849, 969, 1115
PspPI	GGNCC	2 cut(s)	391, 847
PspPPI	RGGWCCY	1 cut(s)	847
PsrI	GAACNNNNNNTAC	2 cut(s)	128, 160
PstI	CTGCAG	1 cut(s)	696
PsuI	RGATCY	1 cut(s)	685
PsyI	GACNNNGTC	1 cut(s)	1939
RsaI	GTAC	1 cut(s)	1593
RsaNI	GTAC	1 cut(s)	1592
RseI	CAYNNNNRTG	4 cut(s)	323, 999, 1461, 1892
SacI	GAGCTC	1 cut(s)	1224
SaqAI	TTAA	7 cut(s)	351, 617, 621, 663, 789, 1256, 1278
SatI	GCNGC	8 cut(s)	254, 359, 1533, 1599, 1618, 1710, 1713, 1741
Sau3AI	GATC	5 cut(s)	501, 685, 1270, 1642, 1678
Sau96I	GGNCC	2 cut(s)	391, 847
SchI	GAGTC	1 cut(s)	884
ScrFI	CCNGG	4 cut(s)	730, 1511, 1839, 1862
SduI	GDGCHC	2 cut(s)	282, 1224
SexAI	ACCWGGT	1 cut(s)	1860
SfaNI	GCATC	4 cut(s)	117, 471, 1015, 1324
SfcI	CTRYAG	1 cut(s)	692
SinI	GGWCC	1 cut(s)	847
SmiMI	CAYNNNNRTG	4 cut(s)	323, 999, 1461, 1892
SmlI	CTYRAG	4 cut(s)	1484, 1536, 1955, 1967
SmoI	CTYRAG	4 cut(s)	1484, 1536, 1955, 1967
SseBI	AGGCCT	1 cut(s)	1831
SsiI	CCGC	6 cut(s)	110, 156, 302, 1160, 1412, 1617
SspMI	CTAG	2 cut(s)	1232, 1721
SstI	GAGCTC	1 cut(s)	1224
StuI	AGGCCT	1 cut(s)	1831
StyD4I	CCNGG	4 cut(s)	728, 1509, 1837, 1860
StyI	CCWWGG	4 cut(s)	97, 540, 701, 1010
TaaI	ACNGT	3 cut(s)	985, 1026, 1152
TaiI	ACGT	5 cut(s)	54, 348, 720, 1755, 1940
TaqI	TCGA	4 cut(s)	54, 429, 631, 714
TauI	GCSGC	1 cut(s)	1620
TfiI	GAWTC	4 cut(s)	114, 272, 697, 1169
Tru1I	TTAA	7 cut(s)	351, 617, 621, 663, 789, 1256, 1278
Tru9I	TTAA	7 cut(s)	351, 617, 621, 663, 789, 1256, 1278
TscAI	CASTG	4 cut(s)	112, 511, 561, 607
TseFI	GTSAC	3 cut(s)	581, 1146, 1856
TseI	GCWGC	7 cut(s)	253, 358, 1532, 1598, 1709, 1712, 1740
Tsp45I	GTSAC	3 cut(s)	581, 1146, 1856
TspDTI	ATGAA	8 cut(s)	137, 633, 734, 899, 1445, 1479, 1520, 1667
TspRI	CASTG	4 cut(s)	112, 511, 561, 607
Tth111I	GACNNNGTC	1 cut(s)	1939
Van91I	CCANNNNNTGG	2 cut(s)	400, 707
VpaK11BI	GGWCC	1 cut(s)	847
XapI	RAATTY	7 cut(s)	217, 433, 442, 535, 1097, 1555, 1654
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1732
XmiI	GTMKAC	1 cut(s)	1866
XmnI	GAANNNNTTC	3 cut(s)	368, 1343, 1470
XspI	CTAG	2 cut(s)	1232, 1721
Zsp2I	ATGCAT	1 cut(s)	1317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.