Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0002460

Physical Location & Seq

Genomic Coordinates Reverse (-)

58821241 .. 58823238

Gene Structure 1998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG358400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGAACAAGACTACCACGGCTCCAGAAAACGCAGGAGACAAGACGGCAACGTCGATGACCTCACCAAGGCATTCAATTTCAACAATGGCGATGGCCTTGGTCTCACTGCTGGAATCGGGATGAAGATGCTGAAGAACATGGGCTACAAAGGAGGCGGTCTTGGCAAGGACGAACAGGGAATGCTCAACCCCATTCAACCCAAATTGAGGCCAAAGAATTTGGGCATGGGCTTCAACGACACCAAAACCAAGCTGCCCAATTTGCAAGAAGAATCGGAGGCTGATGTTCCTCCGCCCACCACCACCACCACCATGCCAACGCCAACTTGGAAGAAGAACGTAATTAACAAGCAGCAGAAGGATTTCTGTTTGGCAGAGTTCTTGGCCCAGAAGATGGAAGAGGAACAGAATGTTGAGGCCGTCGAAAATTCGGAGAATTTGAATGCTCAGGAGGAAGATGGTGATGATGTTCCGATGCCCAATTTGAACAATGAGATCAGTGCTGTTTTGAACCGACTGAAAGAAGCAAATTCCATGGGAGAATTGACACTGGAAGCGCTGGCCAAGGAGTTTGGTGACATTCGGAGGGGTTGCACTGACCATTGTAAGTTAATTAACTTGTCTCGAATTGTGTTTTCATTTGCAAAGCCTCTGTTTAACAAGATGTTTCAGGGTTGGGATCCTCTGCAGAATCCATGGCATGGTTTCGACATTGTGTCCACCTGGAAGGGTTTGCTTCATGGAGAGGGGGAGAGAGAGGAATGTTATTATACCCAATTGGTTAAAGAGGCTGTGTTATCTGAGGTGAGGATGTCTGGCCTCAATAGTTGGCAGGCTGAGGACCCCGAACCAATGCTCATGTTTTTGGAGTCTTGGAAGGAGCTACTGCCCACTTCTGTTGTTCATGACATATTGGATATGGTGGTCTTGCCTGAATTGAAGGTTGCTATACAGTTGTGGGAACCAAACTTGGGAACTGTTCCTATTCATTTGTGGGTGCATCCATGGCTACCGTTACTGTTTGAATTGGGAGACAAGTATCAATTGGAGCTGGAGGAGTTGTTTGGAACAATGAGGTTGATGTTGTGTGATTTTCTTAGCTCATGGCACCCGAGAGATGGGTCTGGTTATACCATAGTGTCACCGTGGAAAGCGGTGTTTGATTCTACCACTTGGGAACTGCTTATGCGTAGATATGTAGTTCCCAAGTTGGAGCTTGTGCTACTAGAAGATTTTGAAGTGAACCCTTTAAATCAGAAGCTTGATCAGTTTAATTGGGTCATGAGGTGGGCTTCTGCTATTCCTATGCATCTGATGGTCAATGTGATGGTCAAGGGCTTCTTCCCGAATTGGATAAAGGGTTTGCATTTCTGGTTGAAAGCCAATCCGAACTTTGAAGATGTTGCGGATTGGTATAGGGGTTGGAAGGAACTTATCCCCAAAGAGTTTCATGCGAATGAAAGTATTCGTTGTCAGCTTGAGCGTGGTCTTAGTATGATGAACCGGGCTGTTGAGGATATGGAGGCTGCTCAAGCTGATTTGAAAGAGAATTTTAGGGTAGTTGAAAAAAGGCAGGGGAAAGCAGTACCAGCAGCCCAAGCAAACTTCGGCAGCCAAACCAACATGGATGGCATTGATCATGAGATGAATTTGAAAGAGAATGGTAAGATTGATCAAGTGCAATTTGAGGCAAAGAAGAGAGCAGCAGCTTTTCTAGCCAATGCGAAATTGGGCAGCACAACTGACGTGGATGACATTAGTCATCAAATGACCCTGAAAGATGTTATTGAAGCTGAGGCGCAGGAACATGGCTTGCTATTTAGGCCTAAACCTGGGCGAATGTTTGATGGTCACCAGGTATACGGCTTTGGTAACATAAGCATAATGGTGGACTTTCTAAAGGAGAAGATATATGCCCAAACAGAAGCGACGTGGTCTCTTGTGTCCCTTGAGAGGTTACTTGAGTTGCACAGGAACAAGGAGACGATGAGTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000375 GO:0000377 GO:0000390 GO:0000398 GO:0000781 GO:0000784 GO:0003674 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022411 GO:0030154 GO:0030198 GO:0031012 GO:0031333 GO:0031974 GO:0031981 GO:0032091 GO:0032502 GO:0032984 GO:0032988 GO:0032991 GO:0034641 GO:0042752 GO:0043021 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043393 GO:0043933 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0046483 GO:0048519 GO:0048523 GO:0048869 GO:0050789 GO:0050794 GO:0051098 GO:0051100 GO:0051128 GO:0051129 GO:0065007 GO:0065009 GO:0070013 GO:0070990 GO:0071008 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0098687 GO:1901360 GO:1902494 GO:1990446 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch GCFC TIP_N

Protein Analysis

665

Amino Acids

76.2

Weight (kDa)

5.24

Isoelectric Point (pI)

34.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
G-patch	PF01585	37 - 77	3.2e-12	G-patch domain
G-patch_2	PF12656	39 - 80	1.9e-06	G-patch domain
GCFC	PF07842	184 - 453	3.4e-67	GC-rich sequence DNA-binding factor-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17070
fragaria_vesca	FvH4_2g25582 FvH4_5g27320
malus_domestica	MD08G1250100.v1.1 MD15G1445100.v1.1
prunus_persica	Prupe.1G587200_v2.0.a1 Prupe.5G048700_v2.0.a1
pyrus_communis	pycom08g21680 pycom15g39220
rosa_chinensis	RchiOBHm_Chr6g0293801 RchiOBHm_Chr6g0293811 RchiOBHm_Chr7g0218481
rosa_laevigata	RLG00000002370 RLG00000011921 RLG00000012034
rosa_multiflora	Rmu_co8485319.1_g000001 Rmu_sc0001301.1_g000062 Rmu_sc0001301.1_g000063 Rmu_sc0001354.1_g000013 Rmu_sc0023058.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240910 Rroxscaffold_7G00173890 Rroxscaffold_7G00175120
rosa_rugosa	Rorug06G0238200 Rorug07G0177400
rosa_samantha	Rh6AG339400 Rh6AG351600 Rh6BG346700 Rh6BG358400 Rh6CG353500 Rh6CG365600 Rh6DG339500 Rh6DG352200 Rh6DG352300 Rh7AG318900 Rh7BG310800 Rh7CG335800 Rh7DG318000
rosa_wichuraiana	Rw6G029540 Rw6G030580 Rw7G027140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	50
AccB1I	GGYRCC	1 cut(s)	1107
AccB7I	CCANNNNNTGG	2 cut(s)	394, 701
AccI	GTMKAC	1 cut(s)	1860
AciI	CCGC	4 cut(s)	156, 293, 1154, 1406
AclWI	GGATC	2 cut(s)	674, 687
AcoI	YGGCCR	1 cut(s)	561
AcsI	RAATTY	6 cut(s)	217, 427, 436, 529, 1549, 1648
AcuI	CTGAAG	1 cut(s)	152
AfaI	GTAC	1 cut(s)	1587
AfeI	AGCGCT	1 cut(s)	558
AfiI	CCNNNNNNNGG	8 cut(s)	67, 207, 394, 701, 971, 1118, 1832, 1953
AhdI	GACNNNNNGTC	1 cut(s)	715
AjiI	CACGTC	2 cut(s)	1747, 1932
AjnI	CCWGG	3 cut(s)	722, 1831, 1854
Alw26I	GTCTC	6 cut(s)	31, 107, 627, 1026, 1941, 1976
AlwI	GGATC	2 cut(s)	674, 687
Ama87I	CYCGRG	1 cut(s)	1111
Aor51HI	AGCGCT	1 cut(s)	558
AoxI	GGCC	7 cut(s)	94, 209, 384, 417, 561, 817, 1823
ApeKI	GCWGC	8 cut(s)	253, 352, 1526, 1592, 1611, 1703, 1706, 1734
ApoI	RAATTY	6 cut(s)	217, 427, 436, 529, 1549, 1648
Asp700I	GAANNNNTTC	2 cut(s)	362, 1464
AspLEI	GCGC	2 cut(s)	559, 1801
AspS9I	GGNCC	2 cut(s)	385, 841
AsuC2I	CCSGG	1 cut(s)	1505
AsuHPI	GGTGA	6 cut(s)	55, 473, 587, 817, 1134, 1844
AvaI	CYCGRG	1 cut(s)	1111
AvaII	GGWCC	1 cut(s)	841
BalI	TGGCCA	1 cut(s)	563
BamHI	GGATCC	1 cut(s)	679
BanI	GGYRCC	1 cut(s)	1107
BbvCI	CCTCAGC	2 cut(s)	837, 1794
BbvI	GCAGC	8 cut(s)	240, 364, 1513, 1604, 1623, 1715, 1718, 1746
BccI	CCATC	8 cut(s)	86, 388, 452, 1112, 1309, 1321, 1622, 1841
BceAI	ACGGC	4 cut(s)	34, 61, 404, 1879
BciT130I	CCWGG	3 cut(s)	724, 1833, 1856
BclI	TGATCA	3 cut(s)	1264, 1636, 1672
BcnI	CCSGG	1 cut(s)	1505
BcoDI	GTCTC	6 cut(s)	31, 107, 627, 1026, 1941, 1976
BfaI	CTAG	2 cut(s)	1226, 1715
BfmI	CTRYAG	1 cut(s)	686
BfoI	RGCGCY	1 cut(s)	560
BisI	GCNGC	8 cut(s)	254, 353, 1527, 1593, 1612, 1704, 1707, 1735
BlsI	GCNGC	8 cut(s)	255, 354, 1528, 1594, 1613, 1705, 1708, 1736
Bme1390I	CCNGG	4 cut(s)	724, 1505, 1833, 1856
Bme18I	GGWCC	1 cut(s)	841
BmeRI	GACNNNNNGTC	1 cut(s)	715
BmeT110I	CYCGRG	1 cut(s)	1111
BmgBI	CACGTC	2 cut(s)	1747, 1932
BmgT120I	GGNCC	2 cut(s)	385, 841
BmiI	GGNNCC	5 cut(s)	22, 681, 843, 963, 1109
BmrFI	CCNGG	4 cut(s)	724, 1505, 1833, 1856
BmsI	GCATC	4 cut(s)	117, 465, 1009, 1318
BoxI	GACNNNNGTC	1 cut(s)	1758
BpmI	CTGGAG	2 cut(s)	7, 1073
Bpu10I	CCTNAGC	3 cut(s)	447, 837, 1794
BpuEI	CTTGAG	4 cut(s)	1499, 1515, 1970, 1982
BpuMI	CCSGG	1 cut(s)	1505
BsaI	GGTCTC	2 cut(s)	107, 1941
BsaJI	CCNNGG	9 cut(s)	16, 66, 97, 534, 564, 695, 1004, 1145, 1832
BsaXI	ACNNNNNCTCC	4 cut(s)	5, 35, 1046, 1076
Bsc4I	CCNNNNNNNGG	8 cut(s)	67, 207, 394, 701, 971, 1118, 1832, 1953
Bse1I	ACTGG	1 cut(s)	555
BseBI	CCWGG	3 cut(s)	724, 1833, 1856
BseDI	CCNNGG	9 cut(s)	16, 66, 97, 534, 564, 695, 1004, 1145, 1832
BseGI	GGATG	5 cut(s)	126, 816, 1000, 1633, 1756
BseLI	CCNNNNNNNGG	8 cut(s)	67, 207, 394, 701, 971, 1118, 1832, 1953
BseMII	CTCAG	4 cut(s)	461, 792, 828, 1785
BseNI	ACTGG	1 cut(s)	555
BseRI	GAGGAG	1 cut(s)	1070
BseXI	GCAGC	8 cut(s)	240, 364, 1513, 1604, 1623, 1715, 1718, 1746
BshFI	GGCC	7 cut(s)	96, 211, 386, 419, 563, 819, 1825
BshNI	GGYRCC	1 cut(s)	1107
BsiHKCI	CYCGRG	1 cut(s)	1111
BsiSI	CCGG	1 cut(s)	1504
BslFI	GGGAC	1 cut(s)	1930
BslI	CCNNNNNNNGG	8 cut(s)	67, 207, 394, 701, 971, 1118, 1832, 1953
BsmAI	GTCTC	6 cut(s)	31, 107, 627, 1026, 1941, 1976
BsmBI	CGTCTC	1 cut(s)	1976
BsmFI	GGGAC	1 cut(s)	1930
BsmI	GAATGC	3 cut(s)	71, 186, 448
BsnI	GGCC	7 cut(s)	96, 211, 386, 419, 563, 819, 1825
Bso31I	GGTCTC	2 cut(s)	107, 1941
BsoBI	CYCGRG	1 cut(s)	1111
Bsp143I	GATC	5 cut(s)	495, 679, 1264, 1636, 1672
Bsp19I	CCATGG	3 cut(s)	534, 695, 1004
BspACI	CCGC	4 cut(s)	156, 293, 1154, 1406
BspANI	GGCC	7 cut(s)	96, 211, 386, 419, 563, 819, 1825
BspCNI	CTCAG	4 cut(s)	460, 793, 829, 1786
BspHI	TCATGA	3 cut(s)	904, 1281, 1639
BspLI	GGNNCC	5 cut(s)	22, 681, 843, 963, 1109
BspMAI	CTGCAG	1 cut(s)	690
BspPI	GGATC	2 cut(s)	674, 687
BspT107I	GGYRCC	1 cut(s)	1107
BspTNI	GGTCTC	2 cut(s)	107, 1941
BsrI	ACTGG	1 cut(s)	555
BssECI	CCNNGG	9 cut(s)	16, 66, 97, 534, 564, 695, 1004, 1145, 1832
BssMI	GATC	5 cut(s)	495, 679, 1264, 1636, 1672
BssNAI	GTATAC	1 cut(s)	1861
BssT1I	CCWWGG	6 cut(s)	66, 97, 534, 564, 695, 1004
Bst1107I	GTATAC	1 cut(s)	1861
Bst2UI	CCWGG	3 cut(s)	724, 1833, 1856
Bst4CI	ACNGT	5 cut(s)	954, 979, 1014, 1020, 1146
Bst6I	CTCTTC	2 cut(s)	393, 1691
BstC8I	GCNNGC	3 cut(s)	561, 834, 1814
BstDEI	CTNAG	6 cut(s)	447, 801, 837, 1097, 1490, 1794
BstDSI	CCRYGG	5 cut(s)	16, 534, 695, 1004, 1145
BstEII	GGTNACC	1 cut(s)	1850
BstENI	CCTNNNNNAGG	1 cut(s)	65
BstF5I	GGATG	5 cut(s)	126, 816, 1000, 1633, 1756
BstH2I	RGCGCY	1 cut(s)	560
BstHHI	GCGC	2 cut(s)	559, 1801
BstKTI	GATC	5 cut(s)	498, 682, 1267, 1639, 1675
BstMAI	GTCTC	6 cut(s)	31, 107, 627, 1026, 1941, 1976
BstMBI	GATC	5 cut(s)	495, 679, 1264, 1636, 1672
BstMWI	GCNNNNNNNGC	8 cut(s)	162, 262, 1006, 1532, 1589, 1598, 1715, 1822
BstNI	CCWGG	3 cut(s)	724, 1833, 1856
BstPAI	GACNNNNGTC	1 cut(s)	1758
BstPI	GGTNACC	1 cut(s)	1850
BstSCI	CCNGG	4 cut(s)	722, 1503, 1831, 1854
BstSFI	CTRYAG	1 cut(s)	686
BstV1I	GCAGC	8 cut(s)	240, 364, 1513, 1604, 1623, 1715, 1718, 1746
BstX2I	RGATCY	1 cut(s)	679
BstYI	RGATCY	1 cut(s)	679
BstZ17I	GTATAC	1 cut(s)	1861
BsuRI	GGCC	7 cut(s)	96, 211, 386, 419, 563, 819, 1825
BtgI	CCRYGG	5 cut(s)	16, 534, 695, 1004, 1145
BtgZI	GCGATG	1 cut(s)	105
BtrI	CACGTC	2 cut(s)	1747, 1932
BtsCI	GGATG	5 cut(s)	126, 816, 1000, 1633, 1756
BtsI	GCAGTG	1 cut(s)	105
BtsIMutI	CAGTG	4 cut(s)	105, 505, 548, 594
Cac8I	GCNNGC	3 cut(s)	561, 834, 1814
CciI	TCATGA	3 cut(s)	904, 1281, 1639
CfoI	GCGC	2 cut(s)	559, 1801
Cfr13I	GGNCC	2 cut(s)	385, 841
CsiI	ACCWGGT	1 cut(s)	1854
Csp6I	GTAC	1 cut(s)	1586
CspCI	CAANNNNNGTGG	4 cut(s)	880, 915, 1728, 1763
CviQI	GTAC	1 cut(s)	1586
DdeI	CTNAG	6 cut(s)	447, 801, 837, 1097, 1490, 1794
DpnI	GATC	5 cut(s)	497, 681, 1266, 1638, 1674
DpnII	GATC	5 cut(s)	495, 679, 1264, 1636, 1672
DraI	TTTAAA	1 cut(s)	1251
DrdI	GACNNNNNNGTC	1 cut(s)	50
DriI	GACNNNNNGTC	1 cut(s)	715
DseDI	GACNNNNNNGTC	1 cut(s)	50
EaeI	YGGCCR	1 cut(s)	561
Eam1104I	CTCTTC	2 cut(s)	393, 1691
Eam1105I	GACNNNNNGTC	1 cut(s)	715
EarI	CTCTTC	2 cut(s)	393, 1691
EciI	GGCGGA	1 cut(s)	282
Eco130I	CCWWGG	6 cut(s)	66, 97, 534, 564, 695, 1004
Eco147I	AGGCCT	1 cut(s)	1825
Eco31I	GGTCTC	2 cut(s)	107, 1941
Eco47I	GGWCC	1 cut(s)	841
Eco47III	AGCGCT	1 cut(s)	558
Eco57I	CTGAAG	1 cut(s)	152
Eco88I	CYCGRG	1 cut(s)	1111
Eco91I	GGTNACC	1 cut(s)	1850
EcoNI	CCTNNNNNAGG	1 cut(s)	65
EcoO109I	RGGNCCY	1 cut(s)	841
EcoO65I	GGTNACC	1 cut(s)	1850
EcoRII	CCWGG	3 cut(s)	722, 1831, 1854
EcoT14I	CCWWGG	6 cut(s)	66, 97, 534, 564, 695, 1004
EcoT22I	ATGCAT	1 cut(s)	1311
ErhI	CCWWGG	6 cut(s)	66, 97, 534, 564, 695, 1004
Esp3I	CGTCTC	1 cut(s)	1976
FalI	AAGNNNNNCTT	2 cut(s)	1325, 1357
FaqI	GGGAC	1 cut(s)	1930
FbaI	TGATCA	3 cut(s)	1264, 1636, 1672
FblI	GTMKAC	1 cut(s)	1860
Fnu4HI	GCNGC	8 cut(s)	254, 353, 1527, 1593, 1612, 1704, 1707, 1735
FokI	GGATG	5 cut(s)	133, 823, 987, 1640, 1763
Fsp4HI	GCNGC	8 cut(s)	254, 353, 1527, 1593, 1612, 1704, 1707, 1735
FspBI	CTAG	2 cut(s)	1226, 1715
GlaI	GCGC	2 cut(s)	558, 1800
GluI	GCNGC	8 cut(s)	254, 353, 1527, 1593, 1612, 1704, 1707, 1735
GsuI	CTGGAG	2 cut(s)	7, 1073
HaeII	RGCGCY	1 cut(s)	560
HaeIII	GGCC	7 cut(s)	96, 211, 386, 419, 563, 819, 1825
HapII	CCGG	1 cut(s)	1504
HhaI	GCGC	2 cut(s)	559, 1801
Hin6I	GCGC	2 cut(s)	557, 1799
HinP1I	GCGC	2 cut(s)	557, 1799
HindIII	AAGCTT	1 cut(s)	1259
HinfI	GANTC	5 cut(s)	114, 272, 691, 869, 1163
HpaII	CCGG	1 cut(s)	1504
HphI	GGTGA	6 cut(s)	55, 473, 587, 817, 1134, 1844
Hpy166II	GTNNAC	4 cut(s)	720, 1243, 1861, 1891
Hpy188I	TCNGA	9 cut(s)	277, 433, 474, 585, 802, 1257, 1314, 1389, 1997
Hpy188III	TCNNGA	8 cut(s)	24, 118, 449, 624, 905, 1282, 1345, 1640
Hpy8I	GTNNAC	4 cut(s)	720, 1243, 1861, 1891
Hpy99I	CGWCG	3 cut(s)	56, 425, 1933
HpyAV	CCTTC	5 cut(s)	352, 721, 871, 934, 1420
HpyCH4III	ACNGT	5 cut(s)	954, 979, 1014, 1020, 1146
HpyCH4IV	ACGT	4 cut(s)	51, 339, 1746, 1931
HpyCH4V	TGCA	9 cut(s)	265, 594, 644, 688, 1000, 1309, 1366, 1681, 1969
HpyF10VI	GCNNNNNNNGC	8 cut(s)	162, 262, 1006, 1532, 1589, 1598, 1715, 1822
HpyF3I	CTNAG	6 cut(s)	447, 801, 837, 1097, 1490, 1794
HpySE526I	ACGT	4 cut(s)	51, 339, 1746, 1931
HspAI	GCGC	2 cut(s)	557, 1799
Ksp22I	TGATCA	3 cut(s)	1264, 1636, 1672
Kzo9I	GATC	5 cut(s)	495, 679, 1264, 1636, 1672
LmnI	GCTCC	4 cut(s)	26, 880, 1048, 1213
Lsp1109I	GCAGC	8 cut(s)	240, 364, 1513, 1604, 1623, 1715, 1718, 1746
LweI	GCATC	4 cut(s)	117, 465, 1009, 1318
MabI	ACCWGGT	1 cut(s)	1854
MaeI	CTAG	2 cut(s)	1226, 1715
MaeII	ACGT	4 cut(s)	51, 339, 1746, 1931
MaeIII	GTNAC	6 cut(s)	575, 1014, 1140, 1850, 1871, 1956
MalI	GATC	5 cut(s)	497, 681, 1266, 1638, 1674
MboI	GATC	5 cut(s)	495, 679, 1264, 1636, 1672
MfeI	CAATTG	2 cut(s)	776, 1043
MflI	RGATCY	1 cut(s)	679
MlsI	TGGCCA	1 cut(s)	563
MluNI	TGGCCA	1 cut(s)	563
MlyI	GAGTC	1 cut(s)	878
MmeI	TCCRAC	2 cut(s)	1191, 1403
Mox20I	TGGCCA	1 cut(s)	563
Mph1103I	ATGCAT	1 cut(s)	1311
MroXI	GAANNNNTTC	2 cut(s)	362, 1464
MscI	TGGCCA	1 cut(s)	563
MseI	TTAA	7 cut(s)	345, 611, 615, 657, 783, 1250, 1272
MslI	CAYNNNNRTG	3 cut(s)	311, 1455, 1886
Msp20I	TGGCCA	1 cut(s)	563
MspI	CCGG	1 cut(s)	1504
MspR9I	CCNGG	4 cut(s)	724, 1505, 1833, 1856
MunI	CAATTG	2 cut(s)	776, 1043
Mva1269I	GAATGC	3 cut(s)	71, 186, 448
MvaI	CCWGG	3 cut(s)	724, 1833, 1856
MwoI	GCNNNNNNNGC	8 cut(s)	162, 262, 1006, 1532, 1589, 1598, 1715, 1822
NciI	CCSGG	1 cut(s)	1505
NcoI	CCATGG	3 cut(s)	534, 695, 1004
NdeII	GATC	5 cut(s)	495, 679, 1264, 1636, 1672
NlaIV	GGNNCC	5 cut(s)	22, 681, 843, 963, 1109
NmuCI	GTSAC	3 cut(s)	575, 1140, 1850
NsiI	ATGCAT	1 cut(s)	1311
PacI	TTAATTAA	1 cut(s)	615
PagI	TCATGA	3 cut(s)	904, 1281, 1639
PceI	AGGCCT	1 cut(s)	1825
PcsI	WCGNNNNNNNCGW	1 cut(s)	51
PctI	GAATGC	3 cut(s)	71, 186, 448
PdmI	GAANNNNTTC	2 cut(s)	362, 1464
PfeI	GAWTC	4 cut(s)	114, 272, 691, 1163
PflFI	GACNNNGTC	1 cut(s)	1933
PflMI	CCANNNNNTGG	2 cut(s)	394, 701
PkrI	GCNGC	8 cut(s)	255, 354, 1528, 1594, 1613, 1705, 1708, 1736
PleI	GAGTC	1 cut(s)	877
PpsI	GAGTC	1 cut(s)	877
PpuMI	RGGWCCY	1 cut(s)	841
PshAI	GACNNNNGTC	1 cut(s)	1758
Psp5II	RGGWCCY	1 cut(s)	841
Psp6I	CCWGG	3 cut(s)	722, 1831, 1854
PspEI	GGTNACC	1 cut(s)	1850
PspGI	CCWGG	3 cut(s)	722, 1831, 1854
PspN4I	GGNNCC	5 cut(s)	22, 681, 843, 963, 1109
PspPI	GGNCC	2 cut(s)	385, 841
PspPPI	RGGWCCY	1 cut(s)	841
PsrI	GAACNNNNNNTAC	2 cut(s)	128, 160
PstI	CTGCAG	1 cut(s)	690
PsuI	RGATCY	1 cut(s)	679
PsyI	GACNNNGTC	1 cut(s)	1933
RsaI	GTAC	1 cut(s)	1587
RsaNI	GTAC	1 cut(s)	1586
RseI	CAYNNNNRTG	3 cut(s)	311, 1455, 1886
SaqAI	TTAA	7 cut(s)	345, 611, 615, 657, 783, 1250, 1272
SatI	GCNGC	8 cut(s)	254, 353, 1527, 1593, 1612, 1704, 1707, 1735
Sau3AI	GATC	5 cut(s)	495, 679, 1264, 1636, 1672
Sau96I	GGNCC	2 cut(s)	385, 841
SchI	GAGTC	1 cut(s)	878
ScrFI	CCNGG	4 cut(s)	724, 1505, 1833, 1856
SexAI	ACCWGGT	1 cut(s)	1854
SfaNI	GCATC	4 cut(s)	117, 465, 1009, 1318
SfcI	CTRYAG	1 cut(s)	686
SinI	GGWCC	1 cut(s)	841
SmiMI	CAYNNNNRTG	3 cut(s)	311, 1455, 1886
SmlI	CTYRAG	4 cut(s)	1478, 1530, 1949, 1961
SmoI	CTYRAG	4 cut(s)	1478, 1530, 1949, 1961
SseBI	AGGCCT	1 cut(s)	1825
SsiI	CCGC	4 cut(s)	156, 293, 1154, 1406
SspMI	CTAG	2 cut(s)	1226, 1715
StuI	AGGCCT	1 cut(s)	1825
StyD4I	CCNGG	4 cut(s)	722, 1503, 1831, 1854
StyI	CCWWGG	6 cut(s)	66, 97, 534, 564, 695, 1004
TaaI	ACNGT	5 cut(s)	954, 979, 1014, 1020, 1146
TaiI	ACGT	4 cut(s)	54, 342, 1749, 1934
TaqI	TCGA	4 cut(s)	54, 423, 625, 708
TfiI	GAWTC	4 cut(s)	114, 272, 691, 1163
Tru1I	TTAA	7 cut(s)	345, 611, 615, 657, 783, 1250, 1272
Tru9I	TTAA	7 cut(s)	345, 611, 615, 657, 783, 1250, 1272
TscAI	CASTG	4 cut(s)	112, 505, 555, 601
TseFI	GTSAC	3 cut(s)	575, 1140, 1850
TseI	GCWGC	8 cut(s)	253, 352, 1526, 1592, 1611, 1703, 1706, 1734
Tsp45I	GTSAC	3 cut(s)	575, 1140, 1850
TspDTI	ATGAA	9 cut(s)	137, 627, 728, 893, 977, 1439, 1473, 1514, 1661
TspRI	CASTG	4 cut(s)	112, 505, 555, 601
Tth111I	GACNNNGTC	1 cut(s)	1933
Van91I	CCANNNNNTGG	2 cut(s)	394, 701
VpaK11BI	GGWCC	1 cut(s)	841
XagI	CCTNNNNNAGG	1 cut(s)	65
XapI	RAATTY	6 cut(s)	217, 427, 436, 529, 1549, 1648
XcmI	CCANNNNNNNNNTGG	2 cut(s)	324, 1726
XmiI	GTMKAC	1 cut(s)	1860
XmnI	GAANNNNTTC	2 cut(s)	362, 1464
XspI	CTAG	2 cut(s)	1226, 1715
Zsp2I	ATGCAT	1 cut(s)	1311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.