Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002460

Physical Location & Seq

Genomic Coordinates Reverse (-)

5174856 .. 5177853

Gene Structure 2998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G048700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

ATGGATTCAATGGAGACATATTTGCATATGGGTAGCCTGATGGATGATTATCAGGAAATGGAAAGGTTTGGCATGGAGAAGGATTATGAGGACAGTCAATGGATTGGCGGCGAGTTCTATTATCGCAAGCGCAAGGATAAGCGCATCCAGACCAAAGACGATGTACTCTATGGCATATTCTCTGCTGATTCTGACGATGATGAAGACAATGAGGGCTCCAGAAAGCGCAGGAAAGACCAAAAGGTCGACCTCACCAAGCCCGTCAATTTTGTCTCCACCGGCACCGTCTTGCCCAACCAGGAGATGGACACAAATTTAAAGCAGCAAAATGATGACCTCGGTGCTAGCGGCGTTGGAACTAGTGGCCTTGGCTTTGGTGCCGCTACGGGTTCAGGTTTGGGTTTTAATAATTTGAATTCCGGTTTGGGTTTGAATAATTCGAATTTAGATCCCACTGGGGGAGAGGAGGAGGATGAGGAAAACGACAACAATTTTCTACCAACGGCGTTTGGGAAGAAAATAAAGGAGGGAGCAGAGAGGAGACAGAAGGAGAGGGAAAAGCTCAAATTGCTCAAGCAGACTACTAGTCAATCTCGAAGTCGTAGAGATTCTGAGGAATCTCAGTTTGGACTAGGAGGAGCAAGGGGGGGCGACGGGGATGGGGGCCTGGGGGCCTTCGAGAAACACACCAAGGGCATTGGGATGAAGATGCTTAAGAACATGGGCTACAAAGGAGGTGGACTTGGCAAGAATGAGCAAGGGATTCTCGCTCCTGTTGAAGCTAAGTTGAGGCCAAAAAATATGGGTATGGGTTTTAATGATTACAAAGAGACTGAAATCAAGCGGTCTAGCTTGCAAGAATTGGAAGCTGAAAAGCCGAACAAGCCTTTGTCCACTGCCAGTGCCACCAACACCACCAAAAAGAGGCTTTCTTGGAAAAAGGCCGTGGCCAACAGGGCTAACAAGGATCAGTATGTCTCTGCCAAGGAGTTGTTAGCCAAGAAGCAGGAAGAGAGTACTGAGGTCTTTGTGCACAAGGTAGTTGATATGCGTGGACCCCAGGTTCGAGTCTTGACCAATTTGGAGAATTTGAATGCTGAAGAGAAAGCCAGGGAGGAGGATGTTCCCATGCCTGAGCTACAGCATAACTTGAGGTTGATTCTGGACTTAGCTGAGCTCGATATCCAGAAGATTGATAAGGATCTGAGGAATGAGAGGGACACGGCGATCAGCTTGAACCAGGAGAAAGAGAGGCTGGCAACGGAGGTGGCCAGACAGAAGCAACACTTAGATAGCTTGGAGGATATTATGAGTGTGTTAGACCGATTGGGAGAAGAGAATGTCATGGGAACATTGACGCTGGAGTCACTGGCAAAGGGCTTTGGTGACCTGCAGAAGAGATACGCTGATGACTATAAAATATGTAACTTGTCGTGCATTGCATGTTCTTTTGCTCTGCCTCTGTTTATCAGGATGTTTCAAGGTTGGGATCCTCTTAGGAACCCCTCGCATGGATTGAATGTGGTATCCTCATGGAAGCATTTGCTTCATGGAGAGGGGGAGAGAGAACAGTACCTTGATATCTTTGATAATACAATGTCGCCTTATACCCAGTTGGTTTCCGAGGTTGTGGTACCCGCAGTGAGGATTGCTGGCATCAATACATGGCAAGCCAAGGACCCTGAACCCATGCTTCGCTTTTTGGAGTATTGGGAGAAATTGATACCCTCTTCCGTCCTTCATGCCATATTGGATATGGTAGTCTTTCCCAAATTGAAGGACGCAGTTGATTTGTGGGAACCTCACCGTGACACTGTTCCCATCCATGTGTGGGTGCATCCATGGCTACCACTCTTGGGACACAAGCTGGAGGAGTTGTATCACACAATACGCTTCAAGTTGAGTAATGTTCTCGGTGCATGGGACCCCAGTGATGCCTCTGCCTATGCCATACTCTCGCCGTGGAAGAAGGTGTTTGATTCAGCCAGTTGGGAACAGCTCATGCATAGATTTATAGTACCCAAGTTGCAGCTTGTCCTACAAGACTTCCAAGTGAACCCTGCCAATCAGAGACTTGATCAGTTTAATTGGGTGATGAGTTGGGCTTCTGCTATTCCAATTCATCTAATGGTAGATATGATGGAGAAGTTTTTCTTCACCAAGTGGCTACAGGTTTTGTATCACTGGTTATGTTCGAAGCCTAATTTTGAAGAGGTTTTGAATTGGTATAAAGGTTGGAAGGAACTCATTCCTGAGGAGCTTCATGCAAATGAAAGTATCCGATATCAGCTTAATTGTGGTCTTGACATGATGAATCGGGCTGTTGAGGGTATGGAGGTGATCCAACCTGGTTTAAAGGAGAATATTAGCTACCTTAGGGTGCTTGAGCAAAGGCAATTTGAGGCACAACAGAAAGCAGCAGCAGCACAAGCAAACTTGGGTGGCACTGCTCACATGGATGGCATTGGTAATGAGATGAGCTTGAAAGATGTTATCGAAGCCCATGCACAGCAGCATGGTCTGCTATTTAGGCCTAAACCCGGGCGGATGCATAATGGTCACCAGATATATGGCTTTGGTAATGTAAGCATAATAGTTGACTCTCTAAATCAAAAGGTATATGCCCAAACAGAGGAAAGCTGGTCTCTTGTATCCCTTGAAAGGTTGCTTGACATGCACAATAGTTCTCTTACAAGAAGACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000375 GO:0000377 GO:0000390 GO:0000398 GO:0000781 GO:0000784 GO:0003674 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022411 GO:0030154 GO:0030198 GO:0031012 GO:0031333 GO:0031974 GO:0031981 GO:0032091 GO:0032502 GO:0032984 GO:0032988 GO:0032991 GO:0034641 GO:0042752 GO:0043021 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043393 GO:0043933 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0046483 GO:0048519 GO:0048523 GO:0048869 GO:0050789 GO:0050794 GO:0051098 GO:0051100 GO:0051128 GO:0051129 GO:0065007 GO:0065009 GO:0070013 GO:0070990 GO:0071008 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0098687 GO:1901360 GO:1902494 GO:1990446 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch GCFC TIP_N

Protein Analysis

902

Amino Acids

102.62

Weight (kDa)

5.74

Isoelectric Point (pI)

42.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17070
fragaria_vesca	FvH4_2g25582 FvH4_5g27320
malus_domestica	MD08G1250100.v1.1 MD15G1445100.v1.1
prunus_persica	Prupe.1G587200_v2.0.a1 Prupe.5G048700_v2.0.a1
pyrus_communis	pycom08g21680 pycom15g39220
rosa_chinensis	RchiOBHm_Chr6g0293801 RchiOBHm_Chr6g0293811 RchiOBHm_Chr7g0218481
rosa_laevigata	RLG00000002370 RLG00000011921 RLG00000012034
rosa_multiflora	Rmu_co8485319.1_g000001 Rmu_sc0001301.1_g000062 Rmu_sc0001301.1_g000063 Rmu_sc0001354.1_g000013 Rmu_sc0023058.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240910 Rroxscaffold_7G00173890 Rroxscaffold_7G00175120
rosa_rugosa	Rorug06G0238200 Rorug07G0177400
rosa_samantha	Rh6AG339400 Rh6AG351600 Rh6BG346700 Rh6BG358400 Rh6CG353500 Rh6CG365600 Rh6DG339500 Rh6DG352200 Rh6DG352300 Rh7AG318900 Rh7BG310800 Rh7CG335800 Rh7DG318000
rosa_wichuraiana	Rw6G029540 Rw6G030580 Rw7G027140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	242, 1363
Acc36I	ACCTGC	1 cut(s)	1398
Acc65I	GGTACC	1 cut(s)	1633
AccB1I	GGYRCC	3 cut(s)	281, 377, 1633
AccB7I	CCANNNNNTGG	1 cut(s)	304
AccI	GTMKAC	1 cut(s)	246
AciI	CCGC	6 cut(s)	108, 348, 381, 844, 1638, 2545
AclWI	GGATC	6 cut(s)	443, 975, 1209, 1484, 1497, 2335
AcoI	YGGCCR	2 cut(s)	948, 1269
AcsI	RAATTY	4 cut(s)	313, 415, 442, 1087
AcuI	CTGAAG	1 cut(s)	1119
AdeI	CACNNNGTG	1 cut(s)	2163
AfaI	GTAC	5 cut(s)	165, 1018, 1574, 1635, 2019
AflII	CTTAAG	1 cut(s)	713
AhdI	GACNNNNNGTC	1 cut(s)	585
AhlI	ACTAGT	2 cut(s)	359, 584
AjnI	CCWGG	6 cut(s)	297, 666, 1059, 1109, 1239, 2347
AjuI	GAANNNNNNNTTGG	4 cut(s)	407, 439, 609, 641
AloI	GAACNNNNNNTCC	2 cut(s)	1047, 1079
Alw21I	GWGCWC	2 cut(s)	1035, 1179
Alw26I	GTCTC	7 cut(s)	8, 277, 535, 824, 982, 2065, 2649
Alw44I	GTGCAC	1 cut(s)	1031
AlwI	GGATC	6 cut(s)	443, 975, 1209, 1484, 1497, 2335
Ama87I	CYCGRG	1 cut(s)	2540
AoxI	GGCC	8 cut(s)	364, 664, 672, 791, 942, 948, 1269, 2531
ApaLI	GTGCAC	1 cut(s)	1031
ApeKI	GCWGC	6 cut(s)	322, 2029, 2417, 2420, 2423, 2512
ApoI	RAATTY	4 cut(s)	313, 415, 442, 1087
ArsI	GACNNNNNNTTYG	2 cut(s)	1047, 1079
Asp700I	GAANNNNTTC	2 cut(s)	2150, 2247
Asp718I	GGTACC	1 cut(s)	1633
AspLEI	GCGC	3 cut(s)	132, 144, 228
AspS9I	GGNCC	5 cut(s)	664, 672, 1055, 1678, 1924
AsuC2I	CCSGG	2 cut(s)	2541, 2542
AsuHPI	GGTGA	7 cut(s)	244, 1397, 1796, 2104, 2149, 2350, 2552
AsuII	TTCGAA	2 cut(s)	440, 2195
AsuNHI	GCTAGC	1 cut(s)	344
AvaI	CYCGRG	1 cut(s)	2540
AvaII	GGWCC	3 cut(s)	1055, 1678, 1924
AxyI	CCTNAGG	2 cut(s)	2253, 2375
BaeGI	GKGCMC	1 cut(s)	1035
BalI	TGGCCA	2 cut(s)	950, 1271
BamHI	GGATCC	1 cut(s)	1489
BanI	GGYRCC	3 cut(s)	281, 377, 1633
BanII	GRGCYC	2 cut(s)	218, 1179
BbsI	GAAGAC	1 cut(s)	210
Bbv12I	GWGCWC	2 cut(s)	1035, 1179
BbvI	GCAGC	6 cut(s)	334, 2041, 2429, 2432, 2435, 2524
BccI	CCATC	6 cut(s)	34, 298, 653, 1829, 2134, 2453
BceAI	ACGGC	4 cut(s)	519, 929, 1239, 1945
BcgI	CGANNNNNNTGC	2 cut(s)	2486, 2520
BciT130I	CCWGG	6 cut(s)	299, 668, 1061, 1111, 1241, 2349
BciVI	GTATCC	3 cut(s)	1537, 2288, 2662
BclI	TGATCA	1 cut(s)	2077
BcnI	CCSGG	2 cut(s)	2541, 2542
BcoDI	GTCTC	7 cut(s)	8, 277, 535, 824, 982, 2065, 2649
BcuI	ACTAGT	2 cut(s)	359, 584
BfaI	CTAG	5 cut(s)	345, 360, 585, 632, 849
BfmI	CTRYAG	3 cut(s)	1139, 1391, 2168
BfrI	CTTAAG	1 cut(s)	713
BfuAI	ACCTGC	1 cut(s)	1398
BfuI	GTATCC	3 cut(s)	1537, 2288, 2662
BglI	GCCNNNNNGGC	1 cut(s)	956
BisI	GCNGC	9 cut(s)	109, 323, 349, 381, 2030, 2418, 2421, 2424, 2513
BlpI	GCTNAGC	1 cut(s)	1173
BlsI	GCNGC	9 cut(s)	110, 324, 350, 382, 2031, 2419, 2422, 2425, 2514
BmcAI	AGTACT	1 cut(s)	1018
Bme1390I	CCNGG	8 cut(s)	299, 668, 1061, 1111, 1241, 2349, 2541, 2542
Bme18I	GGWCC	3 cut(s)	1055, 1678, 1924
BmeRI	GACNNNNNGTC	1 cut(s)	585
BmeT110I	CYCGRG	1 cut(s)	2540
BmgT120I	GGNCC	5 cut(s)	664, 672, 1055, 1678, 1924
BmrFI	CCNGG	8 cut(s)	299, 668, 1061, 1111, 1241, 2349, 2541, 2542
BmrI	ACTGGG	3 cut(s)	465, 1606, 1923
BmsI	GCATC	6 cut(s)	153, 699, 1665, 1846, 1924, 2538
BmtI	GCTAGC	1 cut(s)	348
BmuI	ACTGGG	3 cut(s)	465, 1606, 1923
BpiI	GAAGAC	1 cut(s)	210
BpmI	CTGGAG	3 cut(s)	202, 1382, 1889
Bpu10I	CCTNAGC	1 cut(s)	1134
Bpu1102I	GCTNAGC	1 cut(s)	1173
Bpu14I	TTCGAA	2 cut(s)	440, 2195
BpuEI	CTTGAG	3 cut(s)	557, 1171, 2405
BpuMI	CCSGG	2 cut(s)	2541, 2542
BsaBI	GATNNNNATC	2 cut(s)	48, 1200
BsaI	GGTCTC	1 cut(s)	2649
BsaWI	WCCGGW	1 cut(s)	419
BsaXI	ACNNNNNCTCC	2 cut(s)	1862, 1892
Bse118I	RCCGGY	1 cut(s)	278
Bse1I	ACTGG	7 cut(s)	460, 900, 1374, 1612, 1929, 1986, 2189
Bse21I	CCTNAGG	2 cut(s)	2253, 2375
Bse3DI	GCAATG	1 cut(s)	1437
Bse8I	GATNNNNATC	2 cut(s)	48, 1200
BseBI	CCWGG	6 cut(s)	299, 668, 1061, 1111, 1241, 2349
BseJI	GATNNNNATC	2 cut(s)	48, 1200
BseMI	GCAATG	1 cut(s)	1437
BseMII	CTCAG	7 cut(s)	603, 635, 1011, 1125, 1164, 1196, 2244
BseNI	ACTGG	7 cut(s)	460, 900, 1374, 1612, 1929, 1986, 2189
BseRI	GAGGAG	7 cut(s)	479, 482, 553, 651, 1130, 1886, 2270
BseSI	GKGCMC	1 cut(s)	1035
BseXI	GCAGC	6 cut(s)	334, 2041, 2429, 2432, 2435, 2524
BshFI	GGCC	8 cut(s)	366, 666, 674, 793, 944, 950, 1271, 2533
BshNI	GGYRCC	3 cut(s)	281, 377, 1633
BsiHKAI	GWGCWC	2 cut(s)	1035, 1179
BsiHKCI	CYCGRG	1 cut(s)	2540
BsiSI	CCGG	3 cut(s)	279, 420, 2541
BslFI	GGGAC	3 cut(s)	1232, 1872, 1937
BsmAI	GTCTC	7 cut(s)	8, 277, 535, 824, 982, 2065, 2649
BsmFI	GGGAC	3 cut(s)	1232, 1872, 1937
BsmI	GAATGC	1 cut(s)	1099
BsnI	GGCC	8 cut(s)	366, 666, 674, 793, 944, 950, 1271, 2533
Bso31I	GGTCTC	1 cut(s)	2649
BsoBI	CYCGRG	1 cut(s)	2540
Bsp119I	TTCGAA	2 cut(s)	440, 2195
Bsp1286I	GDGCHC	3 cut(s)	218, 1035, 1179
Bsp143I	GATC	7 cut(s)	448, 967, 1201, 1227, 1489, 2077, 2340
Bsp1720I	GCTNAGC	1 cut(s)	1173
Bsp19I	CCATGG	1 cut(s)	1841
BspACI	CCGC	6 cut(s)	108, 348, 381, 844, 1638, 2545
BspANI	GGCC	8 cut(s)	366, 666, 674, 793, 944, 950, 1271, 2533
BspCNI	CTCAG	7 cut(s)	604, 634, 1012, 1126, 1165, 1197, 2245
BspMAI	CTGCAG	1 cut(s)	1395
BspMI	ACCTGC	1 cut(s)	1398
BspOI	GCTAGC	1 cut(s)	348
BspPI	GGATC	6 cut(s)	443, 975, 1209, 1484, 1497, 2335
BspT104I	TTCGAA	2 cut(s)	440, 2195
BspT107I	GGYRCC	3 cut(s)	281, 377, 1633
BspTI	CTTAAG	1 cut(s)	713
BspTNI	GGTCTC	1 cut(s)	2649
BsrDI	GCAATG	1 cut(s)	1437
BsrFI	RCCGGY	1 cut(s)	278
BsrI	ACTGG	7 cut(s)	460, 900, 1374, 1612, 1929, 1986, 2189
BssAI	RCCGGY	1 cut(s)	278
BssMI	GATC	7 cut(s)	448, 967, 1201, 1227, 1489, 2077, 2340
BssT1I	CCWWGG	5 cut(s)	367, 690, 984, 1674, 1841
Bst2UI	CCWGG	6 cut(s)	299, 668, 1061, 1111, 1241, 2349
Bst4CI	ACNGT	5 cut(s)	95, 286, 1572, 1808, 1816
Bst6I	CTCTTC	6 cut(s)	1005, 1095, 1329, 1391, 1735, 2205
BstAFI	CTTAAG	1 cut(s)	713
BstAPI	GCANNNNNTGC	1 cut(s)	2521
BstBI	TTCGAA	2 cut(s)	440, 2195
BstC8I	GCNNGC	6 cut(s)	128, 346, 854, 1257, 1654, 1671
BstDSI	CCRYGG	3 cut(s)	945, 1841, 1961
BstEII	GGTNACC	2 cut(s)	1385, 2558
BstHHI	GCGC	3 cut(s)	132, 144, 228
BstKTI	GATC	7 cut(s)	451, 970, 1204, 1230, 1492, 2080, 2343
BstMAI	GTCTC	7 cut(s)	8, 277, 535, 824, 982, 2065, 2649
BstMBI	GATC	7 cut(s)	448, 967, 1201, 1227, 1489, 2077, 2340
BstMWI	GCNNNNNNNGC	9 cut(s)	568, 883, 956, 1843, 2423, 2429, 2521, 2530, 2674
BstNI	CCWGG	6 cut(s)	299, 668, 1061, 1111, 1241, 2349
BstNSI	RCATGY	2 cut(s)	1446, 2677
BstPI	GGTNACC	2 cut(s)	1385, 2558
BstSCI	CCNGG	8 cut(s)	297, 666, 1059, 1109, 1239, 2347, 2539, 2540
BstSFI	CTRYAG	3 cut(s)	1139, 1391, 2168
BstSLI	GKGCMC	1 cut(s)	1035
BstV1I	GCAGC	6 cut(s)	334, 2041, 2429, 2432, 2435, 2524
BstV2I	GAAGAC	1 cut(s)	210
BstX2I	RGATCY	3 cut(s)	448, 1201, 1489
BstXI	CCANNNNNNTGG	1 cut(s)	2570
BstYI	RGATCY	3 cut(s)	448, 1201, 1489
Bsu36I	CCTNAGG	2 cut(s)	2253, 2375
BsuI	GTATCC	3 cut(s)	1537, 2288, 2662
BsuRI	GGCC	8 cut(s)	366, 666, 674, 793, 944, 950, 1271, 2533
BtgI	CCRYGG	3 cut(s)	945, 1841, 1961
BtsI	GCAGTG	3 cut(s)	894, 1647, 2445
BtsIMutI	CAGTG	9 cut(s)	453, 894, 907, 1367, 1647, 1812, 1936, 2182, 2445
BveI	ACCTGC	1 cut(s)	1398
Cac8I	GCNNGC	6 cut(s)	128, 346, 854, 1257, 1654, 1671
CfoI	GCGC	3 cut(s)	132, 144, 228
Cfr10I	RCCGGY	1 cut(s)	278
Cfr13I	GGNCC	5 cut(s)	664, 672, 1055, 1678, 1924
Cfr9I	CCCGGG	1 cut(s)	2540
CseI	GACGC	2 cut(s)	1366, 1790
CsiI	ACCWGGT	1 cut(s)	2347
Csp6I	GTAC	5 cut(s)	164, 1017, 1573, 1634, 2018
CspCI	CAANNNNNGTGG	4 cut(s)	718, 753, 1248, 1283
CviQI	GTAC	5 cut(s)	164, 1017, 1573, 1634, 2018
DpnI	GATC	7 cut(s)	450, 969, 1203, 1229, 1491, 2079, 2342
DpnII	GATC	7 cut(s)	448, 967, 1201, 1227, 1489, 2077, 2340
DraI	TTTAAA	2 cut(s)	318, 2355
DraIII	CACNNNGTG	1 cut(s)	2163
DrdI	GACNNNNNNGTC	2 cut(s)	242, 1363
DriI	GACNNNNNGTC	1 cut(s)	585
DseDI	GACNNNNNNGTC	2 cut(s)	242, 1363
EaeI	YGGCCR	2 cut(s)	948, 1269
Eam1104I	CTCTTC	6 cut(s)	1005, 1095, 1329, 1391, 1735, 2205
Eam1105I	GACNNNNNGTC	1 cut(s)	585
EarI	CTCTTC	6 cut(s)	1005, 1095, 1329, 1391, 1735, 2205
EciI	GGCGGA	1 cut(s)	2560
Ecl136II	GAGCTC	1 cut(s)	1177
Eco130I	CCWWGG	5 cut(s)	367, 690, 984, 1674, 1841
Eco147I	AGGCCT	1 cut(s)	2533
Eco24I	GRGCYC	2 cut(s)	218, 1179
Eco31I	GGTCTC	1 cut(s)	2649
Eco32I	GATATC	3 cut(s)	1183, 1582, 2285
Eco47I	GGWCC	3 cut(s)	1055, 1678, 1924
Eco53kI	GAGCTC	1 cut(s)	1177
Eco57I	CTGAAG	1 cut(s)	1119
Eco81I	CCTNAGG	2 cut(s)	2253, 2375
Eco88I	CYCGRG	1 cut(s)	2540
Eco91I	GGTNACC	2 cut(s)	1385, 2558
EcoICRI	GAGCTC	1 cut(s)	1177
EcoO109I	RGGNCCY	4 cut(s)	664, 672, 1678, 1924
EcoO65I	GGTNACC	2 cut(s)	1385, 2558
EcoRI	GAATTC	1 cut(s)	415
EcoRII	CCWGG	6 cut(s)	297, 666, 1059, 1109, 1239, 2347
EcoRV	GATATC	3 cut(s)	1183, 1582, 2285
EcoT14I	CCWWGG	5 cut(s)	367, 690, 984, 1674, 1841
EcoT22I	ATGCAT	2 cut(s)	2007, 2553
EcoT38I	GRGCYC	2 cut(s)	218, 1179
ErhI	CCWWGG	5 cut(s)	367, 690, 984, 1674, 1841
FalI	AAGNNNNNCTT	4 cut(s)	1271, 1303, 2138, 2170
FaqI	GGGAC	3 cut(s)	1232, 1872, 1937
FauI	CCCGC	1 cut(s)	1645
FauNDI	CATATG	1 cut(s)	27
FbaI	TGATCA	1 cut(s)	2077
FblI	GTMKAC	1 cut(s)	246
Fnu4HI	GCNGC	9 cut(s)	109, 323, 349, 381, 2030, 2418, 2421, 2424, 2513
FriOI	GRGCYC	2 cut(s)	218, 1179
Fsp4HI	GCNGC	9 cut(s)	109, 323, 349, 381, 2030, 2418, 2421, 2424, 2513
FspBI	CTAG	5 cut(s)	345, 360, 585, 632, 849
GlaI	GCGC	3 cut(s)	131, 143, 227
GluI	GCNGC	9 cut(s)	109, 323, 349, 381, 2030, 2418, 2421, 2424, 2513
GsuI	CTGGAG	3 cut(s)	202, 1382, 1889
HaeIII	GGCC	8 cut(s)	366, 666, 674, 793, 944, 950, 1271, 2533
HapII	CCGG	3 cut(s)	279, 420, 2541
HgaI	GACGC	2 cut(s)	1366, 1790
HhaI	GCGC	3 cut(s)	132, 144, 228
Hin6I	GCGC	3 cut(s)	130, 142, 226
HinP1I	GCGC	3 cut(s)	130, 142, 226
HincII	GTYRAC	2 cut(s)	247, 2599
HindII	GTYRAC	2 cut(s)	247, 2599
HpaII	CCGG	3 cut(s)	279, 420, 2541
HphI	GGTGA	7 cut(s)	244, 1397, 1796, 2104, 2149, 2350, 2552
Hpy166II	GTNNAC	7 cut(s)	247, 740, 894, 1033, 1055, 2056, 2599
Hpy188I	TCNGA	6 cut(s)	193, 613, 1206, 1624, 2070, 2282
Hpy8I	GTNNAC	7 cut(s)	247, 740, 894, 1033, 1055, 2056, 2599
Hpy99I	CGWCG	1 cut(s)	656
HpyAV	CCTTC	7 cut(s)	73, 541, 685, 1748, 1771, 1963, 2233
HpyCH4III	ACNGT	5 cut(s)	95, 286, 1572, 1808, 1816
HpyF10VI	GCNNNNNNNGC	9 cut(s)	568, 883, 956, 1843, 2423, 2429, 2521, 2530, 2674
HspAI	GCGC	3 cut(s)	130, 142, 226
KflI	GGGWCCC	1 cut(s)	1924
KpnI	GGTACC	1 cut(s)	1637
Ksp22I	TGATCA	1 cut(s)	2077
Kzo9I	GATC	7 cut(s)	448, 967, 1201, 1227, 1489, 2077, 2340
LmnI	GCTCC	5 cut(s)	221, 530, 638, 775, 2257
Lsp1109I	GCAGC	6 cut(s)	334, 2041, 2429, 2432, 2435, 2524
LweI	GCATC	6 cut(s)	153, 699, 1665, 1846, 1924, 2538
MabI	ACCWGGT	1 cut(s)	2347
MaeI	CTAG	5 cut(s)	345, 360, 585, 632, 849
MaeIII	GTNAC	5 cut(s)	1365, 1385, 1424, 1808, 2558
MalI	GATC	7 cut(s)	450, 969, 1203, 1229, 1491, 2079, 2342
MboI	GATC	7 cut(s)	448, 967, 1201, 1227, 1489, 2077, 2340
MflI	RGATCY	3 cut(s)	448, 1201, 1489
MhlI	GDGCHC	3 cut(s)	218, 1035, 1179
MlsI	TGGCCA	2 cut(s)	950, 1271
MluNI	TGGCCA	2 cut(s)	950, 1271
MlyI	GAGTC	3 cut(s)	1077, 1373, 2594
MmeI	TCCRAC	3 cut(s)	334, 2216, 2368
Mox20I	TGGCCA	2 cut(s)	950, 1271
Mph1103I	ATGCAT	2 cut(s)	2007, 2553
MroXI	GAANNNNTTC	2 cut(s)	2150, 2247
MscI	TGGCCA	2 cut(s)	950, 1271
MseI	TTAA	7 cut(s)	317, 405, 714, 816, 2085, 2292, 2354
MslI	CAYNNNNRTG	4 cut(s)	701, 1826, 2268, 2457
Msp20I	TGGCCA	2 cut(s)	950, 1271
MspCI	CTTAAG	1 cut(s)	713
MspI	CCGG	3 cut(s)	279, 420, 2541
MspR9I	CCNGG	8 cut(s)	299, 668, 1061, 1111, 1241, 2349, 2541, 2542
Mva1269I	GAATGC	1 cut(s)	1099
MvaI	CCWGG	6 cut(s)	299, 668, 1061, 1111, 1241, 2349
MwoI	GCNNNNNNNGC	9 cut(s)	568, 883, 956, 1843, 2423, 2429, 2521, 2530, 2674
NciI	CCSGG	2 cut(s)	2541, 2542
NcoI	CCATGG	1 cut(s)	1841
NdeI	CATATG	1 cut(s)	27
NdeII	GATC	7 cut(s)	448, 967, 1201, 1227, 1489, 2077, 2340
NheI	GCTAGC	1 cut(s)	344
NmuCI	GTSAC	4 cut(s)	1365, 1385, 1808, 2558
NsiI	ATGCAT	2 cut(s)	2007, 2553
NspI	RCATGY	2 cut(s)	1446, 2677
NspV	TTCGAA	2 cut(s)	440, 2195
PceI	AGGCCT	1 cut(s)	2533
PctI	GAATGC	1 cut(s)	1099
PdmI	GAANNNNTTC	2 cut(s)	2150, 2247
PfeI	GAWTC	8 cut(s)	5, 188, 608, 617, 763, 1159, 1979, 2314
PflMI	CCANNNNNTGG	1 cut(s)	304
PkrI	GCNGC	9 cut(s)	110, 324, 350, 382, 2031, 2419, 2422, 2425, 2514
PleI	GAGTC	3 cut(s)	1076, 1372, 2594
PpsI	GAGTC	3 cut(s)	1076, 1372, 2594
PpuMI	RGGWCCY	2 cut(s)	1678, 1924
Psp124BI	GAGCTC	1 cut(s)	1179
Psp5II	RGGWCCY	2 cut(s)	1678, 1924
Psp6I	CCWGG	6 cut(s)	297, 666, 1059, 1109, 1239, 2347
PspEI	GGTNACC	2 cut(s)	1385, 2558
PspGI	CCWGG	6 cut(s)	297, 666, 1059, 1109, 1239, 2347
PspPI	GGNCC	5 cut(s)	664, 672, 1055, 1678, 1924
PspPPI	RGGWCCY	2 cut(s)	1678, 1924
PsrI	GAACNNNNNNTAC	2 cut(s)	710, 742
PstI	CTGCAG	1 cut(s)	1395
PsuI	RGATCY	3 cut(s)	448, 1201, 1489
RsaI	GTAC	5 cut(s)	165, 1018, 1574, 1635, 2019
RsaNI	GTAC	5 cut(s)	164, 1017, 1573, 1634, 2018
RseI	CAYNNNNRTG	4 cut(s)	701, 1826, 2268, 2457
SacI	GAGCTC	1 cut(s)	1179
SalI	GTCGAC	1 cut(s)	245
SaqAI	TTAA	7 cut(s)	317, 405, 714, 816, 2085, 2292, 2354
SatI	GCNGC	9 cut(s)	109, 323, 349, 381, 2030, 2418, 2421, 2424, 2513
Sau3AI	GATC	7 cut(s)	448, 967, 1201, 1227, 1489, 2077, 2340
Sau96I	GGNCC	5 cut(s)	664, 672, 1055, 1678, 1924
ScaI	AGTACT	1 cut(s)	1018
SchI	GAGTC	3 cut(s)	1077, 1373, 2594
ScrFI	CCNGG	8 cut(s)	299, 668, 1061, 1111, 1241, 2349, 2541, 2542
SduI	GDGCHC	3 cut(s)	218, 1035, 1179
SexAI	ACCWGGT	1 cut(s)	2347
SfaNI	GCATC	6 cut(s)	153, 699, 1665, 1846, 1924, 2538
SfcI	CTRYAG	3 cut(s)	1139, 1391, 2168
SfuI	TTCGAA	2 cut(s)	440, 2195
SinI	GGWCC	3 cut(s)	1055, 1678, 1924
SmaI	CCCGGG	1 cut(s)	2542
SmiMI	CAYNNNNRTG	4 cut(s)	701, 1826, 2268, 2457
SmlI	CTYRAG	4 cut(s)	572, 713, 1150, 2384
SmoI	CTYRAG	4 cut(s)	572, 713, 1150, 2384
SpeI	ACTAGT	2 cut(s)	359, 584
SseBI	AGGCCT	1 cut(s)	2533
SsiI	CCGC	6 cut(s)	108, 348, 381, 844, 1638, 2545
SspI	AATATT	1 cut(s)	2365
SspMI	CTAG	5 cut(s)	345, 360, 585, 632, 849
SstI	GAGCTC	1 cut(s)	1179
StuI	AGGCCT	1 cut(s)	2533
StyD4I	CCNGG	8 cut(s)	297, 666, 1059, 1109, 1239, 2347, 2539, 2540
StyI	CCWWGG	5 cut(s)	367, 690, 984, 1674, 1841
TaaI	ACNGT	5 cut(s)	95, 286, 1572, 1808, 1816
TaqI	TCGA	8 cut(s)	246, 440, 595, 678, 1066, 1179, 2195, 2496
TaqII	GACCGA	1 cut(s)	1338
TatI	WGTACW	2 cut(s)	163, 1016
TauI	GCSGC	3 cut(s)	111, 351, 383
TfiI	GAWTC	8 cut(s)	5, 188, 608, 617, 763, 1159, 1979, 2314
Tru1I	TTAA	7 cut(s)	317, 405, 714, 816, 2085, 2292, 2354
Tru9I	TTAA	7 cut(s)	317, 405, 714, 816, 2085, 2292, 2354
TscAI	CASTG	9 cut(s)	460, 901, 907, 1374, 1647, 1819, 1936, 2189, 2452
TseFI	GTSAC	4 cut(s)	1365, 1385, 1808, 2558
TseI	GCWGC	6 cut(s)	322, 2029, 2417, 2420, 2423, 2512
Tsp45I	GTSAC	4 cut(s)	1365, 1385, 1808, 2558
TspDTI	ATGAA	8 cut(s)	216, 719, 1538, 1730, 2111, 2252, 2286, 2327
TspGWI	ACGGA	2 cut(s)	1277, 1723
TspMI	CCCGGG	1 cut(s)	2540
TspRI	CASTG	9 cut(s)	460, 901, 907, 1374, 1647, 1819, 1936, 2189, 2452
Van91I	CCANNNNNTGG	1 cut(s)	304
Vha464I	CTTAAG	1 cut(s)	713
VneI	GTGCAC	1 cut(s)	1031
VpaK11BI	GGWCC	3 cut(s)	1055, 1678, 1924
XapI	RAATTY	4 cut(s)	313, 415, 442, 1087
XceI	RCATGY	2 cut(s)	1446, 2677
XcmI	CCANNNNNNNNNTGG	2 cut(s)	301, 1753
XmaI	CCCGGG	1 cut(s)	2540
XmiI	GTMKAC	1 cut(s)	246
XmnI	GAANNNNTTC	2 cut(s)	2150, 2247
XspI	CTAG	5 cut(s)	345, 360, 585, 632, 849
ZrmI	AGTACT	1 cut(s)	1018
Zsp2I	ATGCAT	2 cut(s)	2007, 2553

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.