Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002460

Physical Location & Seq

Genomic Coordinates Reverse (-)

47678104 .. 47686218

Gene Structure 8115 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G587200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2670 bp

ATGGATGATTATCAAGAGATGGAAAGGTTTGGCATGGAGAAGGATTACGAGGACGGCCAATGGATCGGCGGCGAGTTCTATTATCGCAAGCGCAAGGATAAGCGCGTCCAGACCAAAGACGATGTACTCTACGGCATATTCTCTGCCGATTCCGACGACGACGATGAAGACAACGAGGGTTCCAGAAAACGCAGGAAAGATCGAAAGGTCGTCGACCTTACCAAGCCCGTCAATTTCGTCTCCACCGGCATCGTCGTGCCCAACCAGGAGATGGACAACAATTCAAAGCAGCAAAACGATGACCTTGGCGCTACCGGCGTTGCCACCAGTGGCCTTGGCTTTGGTGTCGCTACGGCTTCAGGTTTGGGTTTTAATAATTTGAATTCCGGTTTAGGTTTTAATTCGAATTCGGATCCCACCGGTGGAGAGGAGGAGGATGAGGAAAATGACAGCAATTTTTTGCCGACGGCGTTTGGGAAGAAAATAAAGGAGGGAGCAGAGAGGAGACAGAAGGAGAGGGAAAAGCTCAAATTGCTGAAGCAAACTACTATCCAATCTCGAAGTCGAAGAGATTCTGAAGAATCTCAGTTTGGACTAGGAGGAGCAAGTGGCGGCGGCGGGGATGGGGGCCTGGGGGCCTTTGAGAAACACACCAAGGGCATTGGGATGAGGATGCTTAAGAACATGGGCTACAAAGGAGGTGGACTTGGCAAAAACCAGCAAGGGATTCTCGCTCCTATTGAAGCCAAGTTGAGGCCAAAAAATATGGGTATGGGTTTTAATGATTACGAGGAGACTAAAATCAAGAGGCCTGGCTTGCAAGAATTGGAAGCTGAAAAGCCGAGCAAGCCTTTGCCCGCTGTCAGTTCCTCCATCACCACCAAAAAGAGCCTTTCCTGGAAAAAGGCCGTTGCCAACAGGGCTAATAAGGACCACTATGTCTCTGCCAAGGAGTTGTTAGCCAAGAAGCAGGAAGAGAGTACCGAGGTCTTTGTGCACAAGGTGGTTGATATGCGCGGACCCCAGGTTCGAGTCTTGACCAATTTGGAGAATTTGAATGCCGAAGAGAAAGCCAGGGAAGAGGATATTCCCATGCCTGAGCTACAGCACAACCTGAGGTTGATTCTGGACTTAGCTGAGCTGGATATTCAGAAGATTGATAGGGATCTAAGGAATGAGAGGGACACGGCGATCAGCTTGAACCAGGAGAAAGAGAGGCTGGCAACGGAGGTGGCCAGACAGAAGCAACACTTGGATAGCTTGGGGGATATTATGAACGTGTTAGACCGACTGGGAGAAGAGAATATCATGGGAGCATTGACGCTGGACTCCCTGGCAAAGGACTTTGGTGACCTACAGAAGAGATACGCTGACGACTATAAAATATGCAACTTGTCTTGTATTGCCTGTTCTTTTGCTATACCTCTGTTTATCAGGATGTTTCAAGGTTGGGATCCTCTTAGGAACCCGTCCCATGGGTTGAATGTGGTATCCTCATGGAAGGGTTTGCTTCATGGAGAGGGGGAGAGAGAACAGTACCTTGATATTTGGGATAATACAATGCCACCTTATACCCAGTTGGTTTCCGAGGTTGTGTTACCCGCAGTGAGGATTGCTGGCGTCAATACCTGGCAGGCCAAGGACCCTGAACCCATGCTTCGCTTTTTGGAGTCTTGGGAGAAATTGCTACCCTCTTCTGTCCTTCATGCCATATTGGATATGGTAGTCTTTCCCAAACTGAAGGACGCAGTTGACTTGTGGGAACCTCACCGGGACACTGTTCCCATCCATGTATGGGTGCATCCATGGCTACCACTCTTGGGACACAAGTTGGAGGAGTTGTATCACACAATACGCTTCAAGTTGAGTAACGTTCTCGGTGCATGGCACCCCAGTGATGCCTCTGCCTATACCATACTCTCGCCGTGGAAGAAGGTGTTTGATTCAGCCAGTTGGGAACAACTCATGCATAGATTTATAGTGCCCAAGTTGCAGCTTGTCCTACAAGACTTCCAAGTGAACCCTGCAGATCAAAGACTTGATCAATTTAATTGGGTGATGAGTTGGGCTTCTGCTATTCCAATTCATCTAATGGTAGATATGATGGACAAGTTTTTCTTCACCAAGTGGCTACAGGTTTTGTATCACTGGTTATGTTCGAACCCGAACTTTGAAGAGGTTTTGAATTGGTATAAAGGTTGGAAGGAACTCATTCCTGAGGAGCTTCATGCAAATGAAAGTATCCGGTATCAGCTTAATTGTGGTCTTGACATGATGAATCGGGCTGTTGAGGGTATGGAGGTGGTCCAACCTGGTTTGAAAGAGAATATTAGCTACCTTAGGGTGCTTGAGCAAAGGCAATTTGAGGCACAACAGAAAGCAGCAGCAGCACAAGCAAACTTGGGTGGCACTGCTCACATGGATGGCAGTGGTAATGAGATGAGCTTGAAAGATGTTATTGAAGCCCATGCGCAGCAGCATGGTCTGTTATTTAGGCCTAAACCTGGGCGGATGCATAATGGTCACCAGATATATGGCTTTGGTAATGTAAGCATAATAGTAGACTCTCTAAATCAAAAGGTATATGCCCAAACAGAGGAAAGCTGGTCTCTTGTATCCCTTGAAAGGTTGCTTGACATGCACAATAGTTCTCTTACAAGAAGACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000375 GO:0000377 GO:0000390 GO:0000398 GO:0000781 GO:0000784 GO:0003674 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022411 GO:0030154 GO:0030198 GO:0031012 GO:0031333 GO:0031974 GO:0031981 GO:0032091 GO:0032502 GO:0032984 GO:0032988 GO:0032991 GO:0034641 GO:0042752 GO:0043021 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043393 GO:0043933 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0046483 GO:0048519 GO:0048523 GO:0048869 GO:0050789 GO:0050794 GO:0051098 GO:0051100 GO:0051128 GO:0051129 GO:0065007 GO:0065009 GO:0070013 GO:0070990 GO:0071008 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0098687 GO:1901360 GO:1902494 GO:1990446 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch GCFC TIP_N

Protein Analysis

890

Amino Acids

100.99

Weight (kDa)

5.77

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17070
fragaria_vesca	FvH4_2g25582 FvH4_5g27320
malus_domestica	MD08G1250100.v1.1 MD15G1445100.v1.1
prunus_persica	Prupe.1G587200_v2.0.a1 Prupe.5G048700_v2.0.a1
pyrus_communis	pycom08g21680 pycom15g39220
rosa_chinensis	RchiOBHm_Chr6g0293801 RchiOBHm_Chr6g0293811 RchiOBHm_Chr7g0218481
rosa_laevigata	RLG00000002370 RLG00000011921 RLG00000012034
rosa_multiflora	Rmu_co8485319.1_g000001 Rmu_sc0001301.1_g000062 Rmu_sc0001301.1_g000063 Rmu_sc0001354.1_g000013 Rmu_sc0023058.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240910 Rroxscaffold_7G00173890 Rroxscaffold_7G00175120
rosa_rugosa	Rorug06G0238200 Rorug07G0177400
rosa_samantha	Rh6AG339400 Rh6AG351600 Rh6BG346700 Rh6BG358400 Rh6CG353500 Rh6CG365600 Rh6DG339500 Rh6DG352200 Rh6DG352300 Rh7AG318900 Rh7BG310800 Rh7CG335800 Rh7DG318000
rosa_wichuraiana	Rw6G029540 Rw6G030580 Rw7G027140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	938
Acc16I	TGCGCA	1 cut(s)	2472
AccB1I	GGYRCC	1 cut(s)	1887
AccB7I	CCANNNNNTGG	1 cut(s)	271
AccI	GTMKAC	2 cut(s)	213, 2562
AccII	CGCG	2 cut(s)	105, 1017
AciI	CCGC	8 cut(s)	69, 612, 615, 618, 858, 1017, 1602, 2509
AclI	AACGTT	1 cut(s)	1872
AclWI	GGATC	6 cut(s)	71, 407, 420, 1173, 1448, 1461
AcoI	YGGCCR	2 cut(s)	55, 1233
AcsI	RAATTY	3 cut(s)	382, 406, 1051
AcuI	CTGAAG	4 cut(s)	342, 557, 597, 1760
AcyI	GRCGYC	1 cut(s)	1620
AdeI	CACNNNGTG	2 cut(s)	1003, 2127
AfaI	GTAC	3 cut(s)	126, 982, 1538
AflII	CTTAAG	1 cut(s)	677
AflIII	ACRYGT	1 cut(s)	1278
AgeI	ACCGGT	1 cut(s)	419
AjuI	GAANNNNNNNTTGG	4 cut(s)	573, 605, 1235, 1267
AleI	CACNNNNGTG	1 cut(s)	1893
AloI	GAACNNNNNNTCC	2 cut(s)	1011, 1043
Alw21I	GWGCWC	1 cut(s)	999
Alw26I	GTCTC	5 cut(s)	244, 499, 788, 946, 2613
Alw44I	GTGCAC	1 cut(s)	995
AlwI	GGATC	6 cut(s)	71, 407, 420, 1173, 1448, 1461
ApaLI	GTGCAC	1 cut(s)	995
ApeKI	GCWGC	7 cut(s)	289, 1993, 2381, 2384, 2387, 2473, 2476
ApoI	RAATTY	3 cut(s)	382, 406, 1051
ArsI	GACNNNNNNTTYG	2 cut(s)	1011, 1043
AsiGI	ACCGGT	1 cut(s)	419
Asp700I	GAANNNNTTC	2 cut(s)	571, 2211
AspLEI	GCGC	5 cut(s)	93, 105, 311, 1017, 2473
AspS9I	GGNCC	6 cut(s)	628, 636, 931, 1019, 1642, 2305
AsuC2I	CCSGG	1 cut(s)	1772
AsuHPI	GGTGA	6 cut(s)	868, 1361, 1760, 2068, 2113, 2516
AsuII	TTCGAA	2 cut(s)	404, 2159
AvaII	GGWCC	4 cut(s)	931, 1019, 1642, 2305
AxyI	CCTNAGG	3 cut(s)	1115, 2217, 2339
BaeGI	GKGCMC	3 cut(s)	261, 999, 1986
BalI	TGGCCA	1 cut(s)	1235
BamHI	GGATCC	2 cut(s)	412, 1453
BanI	GGYRCC	1 cut(s)	1887
BbsI	GAAGAC	1 cut(s)	174
Bbv12I	GWGCWC	1 cut(s)	999
BbvI	GCAGC	7 cut(s)	301, 2005, 2393, 2396, 2399, 2485, 2488
BccI	CCATC	7 cut(s)	13, 265, 617, 881, 1793, 2098, 2417
BceAI	ACGGC	7 cut(s)	70, 148, 369, 483, 893, 1203, 1909
BciVI	GTATCC	3 cut(s)	1501, 2252, 2626
BclI	TGATCA	1 cut(s)	2041
BcnI	CCSGG	1 cut(s)	1772
BcoDI	GTCTC	5 cut(s)	244, 499, 788, 946, 2613
BfaI	CTAG	1 cut(s)	596
BfmI	CTRYAG	4 cut(s)	1103, 1355, 2025, 2132
BfoI	RGCGCY	1 cut(s)	312
BfrI	CTTAAG	1 cut(s)	677
BfuI	GTATCC	3 cut(s)	1501, 2252, 2626
BglI	GCCNNNNNGGC	1 cut(s)	920
BlpI	GCTNAGC	1 cut(s)	1137
Bme18I	GGWCC	4 cut(s)	931, 1019, 1642, 2305
BmgT120I	GGNCC	6 cut(s)	628, 636, 931, 1019, 1642, 2305
BmrI	ACTGGG	3 cut(s)	1301, 1570, 1887
BmsI	GCATC	5 cut(s)	258, 663, 1810, 1888, 2502
BmuI	ACTGGG	3 cut(s)	1301, 1570, 1887
BpiI	GAAGAC	1 cut(s)	174
Bpu10I	CCTNAGC	1 cut(s)	1098
Bpu1102I	GCTNAGC	1 cut(s)	1137
Bpu14I	TTCGAA	2 cut(s)	404, 2159
BpuEI	CTTGAG	1 cut(s)	2369
BpuMI	CCSGG	1 cut(s)	1772
BsaBI	GATNNNNATC	2 cut(s)	9, 1164
BsaHI	GRCGYC	1 cut(s)	1620
BsaI	GGTCTC	1 cut(s)	2613
BsaWI	WCCGGW	3 cut(s)	386, 419, 2244
BsaXI	ACNNNNNCTCC	2 cut(s)	1826, 1856
Bse118I	RCCGGY	3 cut(s)	245, 314, 419
Bse1I	ACTGG	6 cut(s)	327, 1296, 1576, 1893, 1950, 2153
Bse21I	CCTNAGG	3 cut(s)	1115, 2217, 2339
Bse8I	GATNNNNATC	2 cut(s)	9, 1164
BseJI	GATNNNNATC	2 cut(s)	9, 1164
BseMII	CTCAG	5 cut(s)	599, 1089, 1106, 1128, 2208
BseNI	ACTGG	6 cut(s)	327, 1296, 1576, 1893, 1950, 2153
BseRI	GAGGAG	7 cut(s)	443, 446, 517, 615, 806, 1850, 2234
BseSI	GKGCMC	3 cut(s)	261, 999, 1986
BseXI	GCAGC	7 cut(s)	301, 2005, 2393, 2396, 2399, 2485, 2488
Bsh1236I	CGCG	2 cut(s)	105, 1017
BshNI	GGYRCC	1 cut(s)	1887
BshTI	ACCGGT	1 cut(s)	419
BsiHKAI	GWGCWC	1 cut(s)	999
BsiSI	CCGG	6 cut(s)	246, 315, 387, 420, 1771, 2245
BslFI	GGGAC	4 cut(s)	1196, 1456, 1787, 1836
BsmAI	GTCTC	5 cut(s)	244, 499, 788, 946, 2613
BsmBI	CGTCTC	1 cut(s)	244
BsmFI	GGGAC	4 cut(s)	1196, 1456, 1787, 1836
BsmI	GAATGC	1 cut(s)	1063
Bso31I	GGTCTC	1 cut(s)	2613
Bsp119I	TTCGAA	2 cut(s)	404, 2159
Bsp1286I	GDGCHC	3 cut(s)	261, 999, 1986
Bsp143I	GATC	8 cut(s)	63, 199, 412, 1165, 1191, 1453, 2029, 2041
Bsp1720I	GCTNAGC	1 cut(s)	1137
Bsp19I	CCATGG	2 cut(s)	1474, 1805
BspACI	CCGC	8 cut(s)	69, 612, 615, 618, 858, 1017, 1602, 2509
BspCNI	CTCAG	5 cut(s)	598, 1090, 1107, 1129, 2209
BspFNI	CGCG	2 cut(s)	105, 1017
BspMAI	CTGCAG	1 cut(s)	2029
BspPI	GGATC	6 cut(s)	71, 407, 420, 1173, 1448, 1461
BspT104I	TTCGAA	2 cut(s)	404, 2159
BspT107I	GGYRCC	1 cut(s)	1887
BspTI	CTTAAG	1 cut(s)	677
BspTNI	GGTCTC	1 cut(s)	2613
BsrFI	RCCGGY	3 cut(s)	245, 314, 419
BsrI	ACTGG	6 cut(s)	327, 1296, 1576, 1893, 1950, 2153
BssAI	RCCGGY	3 cut(s)	245, 314, 419
BssMI	GATC	8 cut(s)	63, 199, 412, 1165, 1191, 1453, 2029, 2041
BssNI	GRCGYC	1 cut(s)	1620
BssT1I	CCWWGG	7 cut(s)	304, 334, 654, 948, 1474, 1638, 1805
Bst4CI	ACNGT	2 cut(s)	1536, 1780
Bst6I	CTCTTC	8 cut(s)	562, 969, 1059, 1074, 1293, 1355, 1699, 2169
BstACI	GRCGYC	1 cut(s)	1620
BstAFI	CTTAAG	1 cut(s)	677
BstBI	TTCGAA	2 cut(s)	404, 2159
BstC8I	GCNNGC	7 cut(s)	89, 818, 848, 858, 1221, 1618, 1635
BstDEI	CTNAG	9 cut(s)	585, 1098, 1115, 1132, 1137, 1169, 1460, 2217, 2339
BstDSI	CCRYGG	3 cut(s)	1474, 1805, 1925
BstEII	GGTNACC	2 cut(s)	1349, 2522
BstENI	CCTNNNNNAGG	1 cut(s)	1337
BstFNI	CGCG	2 cut(s)	105, 1017
BstH2I	RGCGCY	1 cut(s)	312
BstHHI	GCGC	5 cut(s)	93, 105, 311, 1017, 2473
BstKTI	GATC	8 cut(s)	66, 202, 415, 1168, 1194, 1456, 2032, 2044
BstMAI	GTCTC	5 cut(s)	244, 499, 788, 946, 2613
BstMBI	GATC	8 cut(s)	63, 199, 412, 1165, 1191, 1453, 2029, 2041
BstNSI	RCATGY	1 cut(s)	2641
BstPI	GGTNACC	2 cut(s)	1349, 2522
BstSFI	CTRYAG	4 cut(s)	1103, 1355, 2025, 2132
BstSLI	GKGCMC	3 cut(s)	261, 999, 1986
BstUI	CGCG	2 cut(s)	105, 1017
BstV1I	GCAGC	7 cut(s)	301, 2005, 2393, 2396, 2399, 2485, 2488
BstV2I	GAAGAC	1 cut(s)	174
BstX2I	RGATCY	3 cut(s)	412, 1165, 1453
BstXI	CCANNNNNNTGG	1 cut(s)	2534
BstYI	RGATCY	3 cut(s)	412, 1165, 1453
Bsu36I	CCTNAGG	3 cut(s)	1115, 2217, 2339
BsuI	GTATCC	3 cut(s)	1501, 2252, 2626
BtgI	CCRYGG	3 cut(s)	1474, 1805, 1925
BtsI	GCAGTG	3 cut(s)	1611, 2409, 2434
BtsIMutI	CAGTG	7 cut(s)	334, 1611, 1776, 1900, 2146, 2409, 2434
Cac8I	GCNNGC	7 cut(s)	89, 818, 848, 858, 1221, 1618, 1635
CfoI	GCGC	5 cut(s)	93, 105, 311, 1017, 2473
Cfr10I	RCCGGY	3 cut(s)	245, 314, 419
Cfr13I	GGNCC	6 cut(s)	628, 636, 931, 1019, 1642, 2305
CseI	GACGC	4 cut(s)	94, 1330, 1609, 1754
CsiI	ACCWGGT	1 cut(s)	2311
Csp6I	GTAC	3 cut(s)	125, 981, 1537
CspAI	ACCGGT	1 cut(s)	419
CspCI	CAANNNNNGTGG	4 cut(s)	682, 717, 1212, 1247
CviQI	GTAC	3 cut(s)	125, 981, 1537
DdeI	CTNAG	9 cut(s)	585, 1098, 1115, 1132, 1137, 1169, 1460, 2217, 2339
DpnI	GATC	8 cut(s)	65, 201, 414, 1167, 1193, 1455, 2031, 2043
DpnII	GATC	8 cut(s)	63, 199, 412, 1165, 1191, 1453, 2029, 2041
DraIII	CACNNNGTG	2 cut(s)	1003, 2127
DrdI	GACNNNNNNGTC	1 cut(s)	938
DseDI	GACNNNNNNGTC	1 cut(s)	938
EaeI	YGGCCR	2 cut(s)	55, 1233
Eam1104I	CTCTTC	8 cut(s)	562, 969, 1059, 1074, 1293, 1355, 1699, 2169
EarI	CTCTTC	8 cut(s)	562, 969, 1059, 1074, 1293, 1355, 1699, 2169
EciI	GGCGGA	1 cut(s)	2524
Eco130I	CCWWGG	7 cut(s)	304, 334, 654, 948, 1474, 1638, 1805
Eco147I	AGGCCT	2 cut(s)	811, 2497
Eco31I	GGTCTC	1 cut(s)	2613
Eco47I	GGWCC	4 cut(s)	931, 1019, 1642, 2305
Eco57I	CTGAAG	4 cut(s)	342, 557, 597, 1760
Eco81I	CCTNAGG	3 cut(s)	1115, 2217, 2339
Eco91I	GGTNACC	2 cut(s)	1349, 2522
EcoNI	CCTNNNNNAGG	1 cut(s)	1337
EcoO109I	RGGNCCY	3 cut(s)	628, 636, 1642
EcoO65I	GGTNACC	2 cut(s)	1349, 2522
EcoRI	GAATTC	2 cut(s)	382, 406
EcoT14I	CCWWGG	7 cut(s)	304, 334, 654, 948, 1474, 1638, 1805
EcoT22I	ATGCAT	2 cut(s)	1971, 2517
ErhI	CCWWGG	7 cut(s)	304, 334, 654, 948, 1474, 1638, 1805
Esp3I	CGTCTC	1 cut(s)	244
FalI	AAGNNNNNCTT	4 cut(s)	1235, 1267, 2102, 2134
FaqI	GGGAC	4 cut(s)	1196, 1456, 1787, 1836
FauI	CCCGC	3 cut(s)	611, 865, 1609
FbaI	TGATCA	1 cut(s)	2041
FblI	GTMKAC	2 cut(s)	213, 2562
FspBI	CTAG	1 cut(s)	596
FspI	TGCGCA	1 cut(s)	2472
GlaI	GCGC	5 cut(s)	92, 104, 310, 1016, 2472
HaeII	RGCGCY	1 cut(s)	312
HapII	CCGG	6 cut(s)	246, 315, 387, 420, 1771, 2245
HgaI	GACGC	4 cut(s)	94, 1330, 1609, 1754
HhaI	GCGC	5 cut(s)	93, 105, 311, 1017, 2473
Hin1I	GRCGYC	1 cut(s)	1620
Hin6I	GCGC	5 cut(s)	91, 103, 309, 1015, 2471
HinP1I	GCGC	5 cut(s)	91, 103, 309, 1015, 2471
HincII	GTYRAC	2 cut(s)	214, 1753
HindII	GTYRAC	2 cut(s)	214, 1753
HpaII	CCGG	6 cut(s)	246, 315, 387, 420, 1771, 2245
HphI	GGTGA	6 cut(s)	868, 1361, 1760, 2068, 2113, 2516
Hpy166II	GTNNAC	6 cut(s)	214, 704, 997, 1753, 2020, 2563
Hpy188I	TCNGA	5 cut(s)	154, 412, 577, 1152, 1588
Hpy8I	GTNNAC	6 cut(s)	214, 704, 997, 1753, 2020, 2563
Hpy99I	CGWCG	6 cut(s)	158, 161, 164, 215, 257, 469
HpyAV	CCTTC	7 cut(s)	34, 505, 1495, 1712, 1735, 1927, 2197
HpyCH4III	ACNGT	2 cut(s)	1536, 1780
HpyCH4IV	ACGT	2 cut(s)	1278, 1872
HpyF3I	CTNAG	9 cut(s)	585, 1098, 1115, 1132, 1137, 1169, 1460, 2217, 2339
HpySE526I	ACGT	2 cut(s)	1278, 1872
Hsp92I	GRCGYC	1 cut(s)	1620
HspAI	GCGC	5 cut(s)	91, 103, 309, 1015, 2471
Ksp22I	TGATCA	1 cut(s)	2041
Kzo9I	GATC	8 cut(s)	63, 199, 412, 1165, 1191, 1453, 2029, 2041
LmnI	GCTCC	5 cut(s)	494, 602, 739, 1313, 2221
Lsp1109I	GCAGC	7 cut(s)	301, 2005, 2393, 2396, 2399, 2485, 2488
LweI	GCATC	5 cut(s)	258, 663, 1810, 1888, 2502
MabI	ACCWGGT	1 cut(s)	2311
MaeI	CTAG	1 cut(s)	596
MaeII	ACGT	2 cut(s)	1278, 1872
MaeIII	GTNAC	4 cut(s)	1349, 1596, 1868, 2522
MalI	GATC	8 cut(s)	65, 201, 414, 1167, 1193, 1455, 2031, 2043
MboI	GATC	8 cut(s)	63, 199, 412, 1165, 1191, 1453, 2029, 2041
MflI	RGATCY	3 cut(s)	412, 1165, 1453
MhlI	GDGCHC	3 cut(s)	261, 999, 1986
MlsI	TGGCCA	1 cut(s)	1235
MluNI	TGGCCA	1 cut(s)	1235
MlyI	GAGTC	4 cut(s)	1041, 1322, 1679, 2558
MmeI	TCCRAC	4 cut(s)	177, 1812, 2180, 2332
Mox20I	TGGCCA	1 cut(s)	1235
Mph1103I	ATGCAT	2 cut(s)	1971, 2517
MroXI	GAANNNNTTC	2 cut(s)	571, 2211
MscI	TGGCCA	1 cut(s)	1235
MseI	TTAA	6 cut(s)	372, 399, 678, 780, 2049, 2256
MslI	CAYNNNNRTG	5 cut(s)	254, 665, 1893, 2232, 2421
Msp20I	TGGCCA	1 cut(s)	1235
MspA1I	CMGCKG	1 cut(s)	860
MspCI	CTTAAG	1 cut(s)	677
MspI	CCGG	6 cut(s)	246, 315, 387, 420, 1771, 2245
Mva1269I	GAATGC	1 cut(s)	1063
MvnI	CGCG	2 cut(s)	105, 1017
NciI	CCSGG	1 cut(s)	1772
NcoI	CCATGG	2 cut(s)	1474, 1805
NdeII	GATC	8 cut(s)	63, 199, 412, 1165, 1191, 1453, 2029, 2041
NmeAIII	GCCGAG	1 cut(s)	867
NmuCI	GTSAC	2 cut(s)	1349, 2522
NsbI	TGCGCA	1 cut(s)	2472
NsiI	ATGCAT	2 cut(s)	1971, 2517
NspI	RCATGY	1 cut(s)	2641
NspV	TTCGAA	2 cut(s)	404, 2159
OliI	CACNNNNGTG	1 cut(s)	1893
PceI	AGGCCT	2 cut(s)	811, 2497
PctI	GAATGC	1 cut(s)	1063
PdmI	GAANNNNTTC	2 cut(s)	571, 2211
PfeI	GAWTC	7 cut(s)	149, 572, 581, 727, 1123, 1943, 2278
PflMI	CCANNNNNTGG	1 cut(s)	271
PfoI	TCCNGGA	1 cut(s)	896
PinAI	ACCGGT	1 cut(s)	419
PleI	GAGTC	4 cut(s)	1040, 1322, 1678, 2558
PpsI	GAGTC	4 cut(s)	1040, 1322, 1678, 2558
PpuMI	RGGWCCY	1 cut(s)	1642
Psp1406I	AACGTT	1 cut(s)	1872
Psp5II	RGGWCCY	1 cut(s)	1642
PspEI	GGTNACC	2 cut(s)	1349, 2522
PspPI	GGNCC	6 cut(s)	628, 636, 931, 1019, 1642, 2305
PspPPI	RGGWCCY	1 cut(s)	1642
PsrI	GAACNNNNNNTAC	4 cut(s)	674, 706, 1393, 1425
PstI	CTGCAG	1 cut(s)	2029
PsuI	RGATCY	3 cut(s)	412, 1165, 1453
RsaI	GTAC	3 cut(s)	126, 982, 1538
RsaNI	GTAC	3 cut(s)	125, 981, 1537
RseI	CAYNNNNRTG	5 cut(s)	254, 665, 1893, 2232, 2421
SalI	GTCGAC	1 cut(s)	212
SaqAI	TTAA	6 cut(s)	372, 399, 678, 780, 2049, 2256
Sau3AI	GATC	8 cut(s)	63, 199, 412, 1165, 1191, 1453, 2029, 2041
Sau96I	GGNCC	6 cut(s)	628, 636, 931, 1019, 1642, 2305
SchI	GAGTC	4 cut(s)	1041, 1322, 1679, 2558
SduI	GDGCHC	3 cut(s)	261, 999, 1986
SexAI	ACCWGGT	1 cut(s)	2311
SfaNI	GCATC	5 cut(s)	258, 663, 1810, 1888, 2502
SfcI	CTRYAG	4 cut(s)	1103, 1355, 2025, 2132
SfuI	TTCGAA	2 cut(s)	404, 2159
SgrAI	CRCCGGYG	1 cut(s)	419
SinI	GGWCC	4 cut(s)	931, 1019, 1642, 2305
SmiMI	CAYNNNNRTG	5 cut(s)	254, 665, 1893, 2232, 2421
SmlI	CTYRAG	2 cut(s)	677, 2348
SmoI	CTYRAG	2 cut(s)	677, 2348
SseBI	AGGCCT	2 cut(s)	811, 2497
SsiI	CCGC	8 cut(s)	69, 612, 615, 618, 858, 1017, 1602, 2509
SspI	AATATT	1 cut(s)	2329
SspMI	CTAG	1 cut(s)	596
StuI	AGGCCT	2 cut(s)	811, 2497
StyI	CCWWGG	7 cut(s)	304, 334, 654, 948, 1474, 1638, 1805
TaaI	ACNGT	2 cut(s)	1536, 1780
TaiI	ACGT	2 cut(s)	1281, 1875
TaqI	TCGA	7 cut(s)	202, 213, 404, 559, 565, 1030, 2159
TaqII	GACCGA	1 cut(s)	1302
TatI	WGTACW	1 cut(s)	124
TauI	GCSGC	3 cut(s)	72, 615, 618
TfiI	GAWTC	7 cut(s)	149, 572, 581, 727, 1123, 1943, 2278
Tru1I	TTAA	6 cut(s)	372, 399, 678, 780, 2049, 2256
Tru9I	TTAA	6 cut(s)	372, 399, 678, 780, 2049, 2256
TscAI	CASTG	7 cut(s)	334, 1611, 1783, 1900, 2153, 2416, 2434
TseFI	GTSAC	2 cut(s)	1349, 2522
TseI	GCWGC	7 cut(s)	289, 1993, 2381, 2384, 2387, 2473, 2476
Tsp45I	GTSAC	2 cut(s)	1349, 2522
TspDTI	ATGAA	8 cut(s)	180, 1289, 1502, 1694, 2075, 2216, 2250, 2291
TspGWI	ACGGA	1 cut(s)	1241
TspRI	CASTG	7 cut(s)	334, 1611, 1783, 1900, 2153, 2416, 2434
Van91I	CCANNNNNTGG	1 cut(s)	271
Vha464I	CTTAAG	1 cut(s)	677
VneI	GTGCAC	1 cut(s)	995
VpaK11BI	GGWCC	4 cut(s)	931, 1019, 1642, 2305
XagI	CCTNNNNNAGG	1 cut(s)	1337
XapI	RAATTY	3 cut(s)	382, 406, 1051
XceI	RCATGY	1 cut(s)	2641
XcmI	CCANNNNNNNNNTGG	2 cut(s)	268, 1717
XmiI	GTMKAC	2 cut(s)	213, 2562
XmnI	GAANNNNTTC	2 cut(s)	571, 2211
XspI	CTAG	1 cut(s)	596
Zsp2I	ATGCAT	2 cut(s)	1971, 2517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.