Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0002460

Physical Location & Seq

Genomic Coordinates Reverse (-)

21117702 .. 21119654

Gene Structure 1953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g21680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGGATGATTATCAGGAGATGGAGAGGTTTGGAATGGAGAAGGATTACGAGGACGGCCAGTGGATCGGCGGGGAGTTCTATTACCGCAAGCGCAAGGACAAGCGCGTCCAAACCAAAGACGACGTCCTCTACGGCATATTCACTGCCGATTCCGACGACGACGATGACAACGACGGCCCCAGAAAACGCAGGAAAGACCGAAAGGTCGACCTCACCAAGCCCGTCAGTTTCATCCCCACCGGAATCGTCATGCCCAACCAGGAGGTCGACGACAATTCAAAGCAGCAAAACGATGATAACCGGCCTGGCCTCGGCGCCACCATTGGCCTCGGCTTTGGTGCCGCTACCGGTTCCGGTTTAGGTTTTAAAGTTCCGAATTTGGATCCGTTGGGGGGCGAGGAGGAGGATGACGACGACGAGCAGAGTTTTTTGCCGACAGCGTTTGGGAAGAAGATAAAGGAGGGAGCGGAGAGGAGACACAAGGAGAGGGAAAAGCTGAAATTGCTCAAGCAGACTAGTAGTCAGTCTCAGGGTCGAGGAGGTTCTGAAGAAGGCCAATTTGCAGGATTAGGAGCAAAGGGCGGCGGGGATGGGGGTTTGGGGGCCTTCGAGAAGCACACCAAGGGCATTGGAATGAAGATGCTTAAGAACATGGGCTACAAAGGAGGCGGACTTGGGAAGAACGAGCAAGGCATTCTCGCTCCTATTGAAGCCAAGTTGAGGCCAAAGAATATGGGCATGGGTTTCAATGATTACAAGGAGACGGAAGTCAAGCGGCCTAGCTTGCAAGAATTGGAAGCTGAAAAGCCGAGCAAGCCTTTGCCGGATGCGACCTCCGCCAAAAAGAAGCCTTCCTGGAAGAAGAGGGCCGCTGCCGACAAGACTGACAAGGACCATTATGTCTCTGCCAAGGAGTTGTTAGCCCAGAAGCAGGAAGAGGGCACCGAGGTCCTTGTGCACAAGGTGGTTGATATGCGAGGACCTCAGGTTCGAGTCTTGACCAATCTGGAGAATTTGAATGCCGAAGAGAAAGCCAGGGAAGAGGACGTTCCCATGCCCGAGCTACAGCACAACGTCAGGTTGATTCTGGACTTAGCTGAGCTTGATATCCAGAAGATTGATAGGGACCTGAGGATTGAGCGGGACACGGCCATCAGCTTGAACCAGGAGAAAGAGAGGTTGAAGACGGAGGTGGCCAGGCAGAAGCAATACCTGGATAGCTTGGAGGATATTAGGACCGTCTTGGATCGACTGGGAGAAGAGAATAGCATGGGAACGTTGACGCTGGACTCCCTGACAAAGGGCTTTGGTGACCTGCAGAAGAGATACACTGATGACTATAAGTTATGTAACTTGTCTTGCATTGCCTGCTCCTTTGCTCTGCCTCTATTTATTAGGATGTTTCAGGGCTGGAATCCTCTTAGAAACCCCTCGCATGGGTTGGATTTAGTATCTTCTTGGAAGGCTTTGCTTCATGGAGAGGGGGAGAGAGAACAGTACTTGGATATTTGGGATAACTCAATGTCCCCTTACACCCAATTGCTTTCCGAGGTTGTAGTACCTGCCGTTAGGATTGCTGGCGTGAATACATGGCAGCCCAAGGACCCTGAACCCATGCTTCGCTTTCTGGAGTCCTGGGAGAAATTGCTGCCTCCTTCTGTCCTTGATTCCTTATTGGATATGGTAATCTTTCCTAAATTGAAGGACGCAGTTGACTTGTGGGAACCTCACCGGGACACTGTTCCCATCCATGTGTGGGTGCATCCGTGGCTACCATTCTTGGGACACAAGTTGGAAGACTTATATCACACAATACGATTCAAGTTGAGTAATGTTCTGGGTGCTTGGCACCCAAGTGATGGATCGATCAAGCTGTTGCCTATACTATACTCTCACCGTGGAAGAAGGTGTTTGATGCCGCAAGTTGGGAACAGCTTATGTATAGATTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000375 GO:0000377 GO:0000390 GO:0000398 GO:0000781 GO:0000784 GO:0003674 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005694 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0022411 GO:0030154 GO:0030198 GO:0031012 GO:0031333 GO:0031974 GO:0031981 GO:0032091 GO:0032502 GO:0032984 GO:0032988 GO:0032991 GO:0034641 GO:0042752 GO:0043021 GO:0043062 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043393 GO:0043933 GO:0044087 GO:0044092 GO:0044237 GO:0044238 GO:0044421 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044877 GO:0046483 GO:0048519 GO:0048523 GO:0048869 GO:0050789 GO:0050794 GO:0051098 GO:0051100 GO:0051128 GO:0051129 GO:0065007 GO:0065009 GO:0070013 GO:0070990 GO:0071008 GO:0071013 GO:0071014 GO:0071704 GO:0071826 GO:0071840 GO:0090304 GO:0098687 GO:1901360 GO:1902494 GO:1990446 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

G-patch GCFC TIP_N

Protein Analysis

651

Amino Acids

73.47

Weight (kDa)

5.71

Isoelectric Point (pI)

42.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIP_N	PF12457	2 - 100	1.7e-20	Tuftelin interacting protein N terminal
G-patch	PF01585	207 - 248	3.5e-14	G-patch domain
GCFC	PF07842	429 - 626	1.1e-59	GC-rich sequence DNA-binding factor-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002460)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17070
fragaria_vesca	FvH4_2g25582 FvH4_5g27320
malus_domestica	MD08G1250100.v1.1 MD15G1445100.v1.1
prunus_persica	Prupe.1G587200_v2.0.a1 Prupe.5G048700_v2.0.a1
pyrus_communis	pycom08g21680 pycom15g39220
rosa_chinensis	RchiOBHm_Chr6g0293801 RchiOBHm_Chr6g0293811 RchiOBHm_Chr7g0218481
rosa_laevigata	RLG00000002370 RLG00000011921 RLG00000012034
rosa_multiflora	Rmu_co8485319.1_g000001 Rmu_sc0001301.1_g000062 Rmu_sc0001301.1_g000063 Rmu_sc0001354.1_g000013 Rmu_sc0023058.1_g000001
rosa_roxburghii	Rroxscaffold_3G00240910 Rroxscaffold_7G00173890 Rroxscaffold_7G00175120
rosa_rugosa	Rorug06G0238200 Rorug07G0177400
rosa_samantha	Rh6AG339400 Rh6AG351600 Rh6BG346700 Rh6BG358400 Rh6CG353500 Rh6CG365600 Rh6DG339500 Rh6DG352200 Rh6DG352300 Rh7AG318900 Rh7BG310800 Rh7CG335800 Rh7DG318000
rosa_wichuraiana	Rw6G029540 Rw6G030580 Rw7G027140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	104, 203, 899
AatII	GACGTC	1 cut(s)	126
Acc36I	ACCTGC	2 cut(s)	1323, 1570
AccB1I	GGYRCC	4 cut(s)	314, 338, 941, 1848
AccB7I	CCANNNNNTGG	1 cut(s)	1859
AccBSI	CCGCTC	2 cut(s)	467, 1141
AccI	GTMKAC	2 cut(s)	207, 267
AccII	CGCG	1 cut(s)	105
AclI	AACGTT	1 cut(s)	1277
AclWI	GGATC	5 cut(s)	71, 377, 390, 1254, 1870
AcoI	YGGCCR	3 cut(s)	55, 1149, 1194
AcsI	RAATTY	2 cut(s)	376, 1012
AcuI	CTGAAG	1 cut(s)	567
AcyI	GRCGYC	2 cut(s)	123, 315
AdeI	CACNNNGTG	1 cut(s)	964
AfaI	GTAC	2 cut(s)	1499, 1560
AflII	CTTAAG	1 cut(s)	644
AgeI	ACCGGT	1 cut(s)	347
AgsI	TTSAA	8 cut(s)	279, 710, 748, 1018, 1162, 1183, 1702, 1822
AhdI	GACNNNNNGTC	1 cut(s)	519
AhlI	ACTAGT	1 cut(s)	515
AjnI	CCWGG	8 cut(s)	258, 304, 854, 1034, 1164, 1196, 1212, 1634
AleI	CACNNNNGTG	1 cut(s)	1854
AloI	GAACNNNNNNTCC	2 cut(s)	972, 1004
Alw21I	GWGCWC	1 cut(s)	960
Alw26I	GTCTC	4 cut(s)	469, 531, 755, 907
Alw44I	GTGCAC	1 cut(s)	956
AlwI	GGATC	5 cut(s)	71, 377, 390, 1254, 1870
Ama87I	CYCGRG	1 cut(s)	1058
ApaLI	GTGCAC	1 cut(s)	956
ApeKI	GCWGC	4 cut(s)	283, 872, 1594, 1648
ApoI	RAATTY	2 cut(s)	376, 1012
ArsI	GACNNNNNNTTYG	4 cut(s)	108, 140, 972, 1004
AsiGI	ACCGGT	1 cut(s)	347
AspLEI	GCGC	3 cut(s)	93, 105, 317
AspS9I	GGNCC	9 cut(s)	176, 603, 867, 892, 949, 980, 1126, 1236, 1603
AsuC2I	CCSGG	1 cut(s)	1733
AsuHPI	GGTGA	4 cut(s)	205, 1322, 1721, 1886
AvaI	CYCGRG	1 cut(s)	1058
AvaII	GGWCC	6 cut(s)	892, 949, 980, 1126, 1236, 1603
AxyI	CCTNAGG	2 cut(s)	984, 1130
BaeGI	GKGCMC	2 cut(s)	944, 960
BalI	TGGCCA	1 cut(s)	1196
BamHI	GGATCC	1 cut(s)	382
BanI	GGYRCC	4 cut(s)	314, 338, 941, 1848
BbsI	GAAGAC	2 cut(s)	1190, 1803
Bbv12I	GWGCWC	1 cut(s)	960
BbvI	GCAGC	4 cut(s)	295, 859, 1606, 1635
BccI	CCATC	5 cut(s)	13, 584, 1160, 1754, 1853
BceAI	ACGGC	5 cut(s)	70, 148, 190, 1164, 1550
BciT130I	CCWGG	8 cut(s)	260, 306, 856, 1036, 1166, 1198, 1214, 1636
BcnI	CCSGG	1 cut(s)	1733
BcoDI	GTCTC	4 cut(s)	469, 531, 755, 907
BcuI	ACTAGT	1 cut(s)	515
BfaI	CTAG	2 cut(s)	516, 780
BfmI	CTRYAG	2 cut(s)	1064, 1316
BfoI	RGCGCY	1 cut(s)	318
BfrI	CTTAAG	1 cut(s)	644
BfuAI	ACCTGC	2 cut(s)	1323, 1570
BisI	GCNGC	9 cut(s)	284, 342, 583, 776, 870, 873, 1595, 1649, 1919
BlpI	GCTNAGC	1 cut(s)	1098
BlsI	GCNGC	9 cut(s)	285, 343, 584, 777, 871, 874, 1596, 1650, 1920
BmcAI	AGTACT	1 cut(s)	1499
Bme1390I	CCNGG	9 cut(s)	260, 306, 856, 1036, 1166, 1198, 1214, 1636, 1733
Bme18I	GGWCC	6 cut(s)	892, 949, 980, 1126, 1236, 1603
BmeRI	GACNNNNNGTC	1 cut(s)	519
BmeT110I	CYCGRG	1 cut(s)	1058
BmgT120I	GGNCC	9 cut(s)	176, 603, 867, 892, 949, 980, 1126, 1236, 1603
BmrFI	CCNGG	9 cut(s)	260, 306, 856, 1036, 1166, 1198, 1214, 1636, 1733
BmrI	ACTGGG	1 cut(s)	1262
BmsI	GCATC	4 cut(s)	630, 817, 1771, 1905
BmuI	ACTGGG	1 cut(s)	1262
BoxI	GACNNNNGTC	1 cut(s)	767
BpiI	GAAGAC	2 cut(s)	1190, 1803
BpmI	CTGGAG	2 cut(s)	1028, 1649
Bpu1102I	GCTNAGC	1 cut(s)	1098
BpuEI	CTTGAG	1 cut(s)	491
BpuMI	CCSGG	1 cut(s)	1733
Bsa29I	ATCGAT	1 cut(s)	1865
BsaBI	GATNNNNATC	1 cut(s)	9
BsaHI	GRCGYC	2 cut(s)	123, 315
BsaWI	WCCGGW	3 cut(s)	239, 347, 353
Bse118I	RCCGGY	2 cut(s)	300, 347
Bse1I	ACTGG	2 cut(s)	58, 1257
Bse21I	CCTNAGG	2 cut(s)	984, 1130
Bse3DI	GCAATG	1 cut(s)	1362
Bse8I	GATNNNNATC	1 cut(s)	9
BseBI	CCWGG	8 cut(s)	260, 306, 856, 1036, 1166, 1198, 1214, 1636
BseCI	ATCGAT	1 cut(s)	1865
BseGI	GGATG	8 cut(s)	10, 231, 412, 595, 832, 1404, 1746, 1762
BseJI	GATNNNNATC	1 cut(s)	9
BseMI	GCAATG	1 cut(s)	1362
BseMII	CTCAG	4 cut(s)	542, 998, 1089, 1121
BseNI	ACTGG	2 cut(s)	58, 1257
BseRI	GAGGAG	4 cut(s)	413, 416, 487, 552
BseSI	GKGCMC	2 cut(s)	944, 960
BseXI	GCAGC	4 cut(s)	295, 859, 1606, 1635
Bsh1236I	CGCG	1 cut(s)	105
BshNI	GGYRCC	4 cut(s)	314, 338, 941, 1848
BshTI	ACCGGT	1 cut(s)	347
BshVI	ATCGAT	1 cut(s)	1865
BsiHKAI	GWGCWC	1 cut(s)	960
BsiHKCI	CYCGRG	1 cut(s)	1058
BsiSI	CCGG	6 cut(s)	240, 301, 348, 354, 824, 1732
BslFI	GGGAC	5 cut(s)	1139, 1157, 1510, 1748, 1797
BsmAI	GTCTC	4 cut(s)	469, 531, 755, 907
BsmBI	CGTCTC	1 cut(s)	755
BsmFI	GGGAC	5 cut(s)	1139, 1157, 1510, 1748, 1797
BsmI	GAATGC	2 cut(s)	693, 1024
BsoBI	CYCGRG	1 cut(s)	1058
Bsp1286I	GDGCHC	2 cut(s)	944, 960
Bsp143I	GATC	5 cut(s)	63, 382, 1246, 1862, 1866
Bsp1720I	GCTNAGC	1 cut(s)	1098
BspCNI	CTCAG	4 cut(s)	541, 997, 1090, 1122
BspDI	ATCGAT	1 cut(s)	1865
BspFNI	CGCG	1 cut(s)	105
BspMAI	CTGCAG	1 cut(s)	1320
BspMI	ACCTGC	2 cut(s)	1323, 1570
BspPI	GGATC	5 cut(s)	71, 377, 390, 1254, 1870
BspT107I	GGYRCC	4 cut(s)	314, 338, 941, 1848
BspTI	CTTAAG	1 cut(s)	644
BsrBI	CCGCTC	2 cut(s)	467, 1141
BsrDI	GCAATG	1 cut(s)	1362
BsrFI	RCCGGY	2 cut(s)	300, 347
BsrI	ACTGG	2 cut(s)	58, 1257
BssAI	RCCGGY	2 cut(s)	300, 347
BssMI	GATC	5 cut(s)	63, 382, 1246, 1862, 1866
BssNI	GRCGYC	2 cut(s)	123, 315
BssT1I	CCWWGG	3 cut(s)	621, 909, 1599
Bst2UI	CCWGG	8 cut(s)	260, 306, 856, 1036, 1166, 1198, 1214, 1636
Bst4CI	ACNGT	4 cut(s)	1240, 1497, 1741, 1898
Bst6I	CTCTTC	6 cut(s)	857, 930, 1020, 1035, 1254, 1316
BstACI	GRCGYC	2 cut(s)	123, 315
BstAFI	CTTAAG	1 cut(s)	644
BstAPI	GCANNNNNTGC	1 cut(s)	1368
BstC8I	GCNNGC	5 cut(s)	89, 785, 815, 1369, 1579
BstDEI	CTNAG	6 cut(s)	528, 984, 1093, 1098, 1130, 1421
BstDSI	CCRYGG	2 cut(s)	1766, 1897
BstEII	GGTNACC	1 cut(s)	1310
BstENI	CCTNNNNNAGG	1 cut(s)	1298
BstF5I	GGATG	8 cut(s)	10, 231, 412, 595, 832, 1404, 1746, 1762
BstFNI	CGCG	1 cut(s)	105
BstH2I	RGCGCY	1 cut(s)	318
BstHHI	GCGC	3 cut(s)	93, 105, 317
BstKTI	GATC	5 cut(s)	66, 385, 1249, 1865, 1869
BstMAI	GTCTC	4 cut(s)	469, 531, 755, 907
BstMBI	GATC	5 cut(s)	63, 382, 1246, 1862, 1866
BstMWI	GCNNNNNNNGC	6 cut(s)	502, 784, 814, 836, 1368, 1768
BstNI	CCWGG	8 cut(s)	260, 306, 856, 1036, 1166, 1198, 1214, 1636
BstPAI	GACNNNNGTC	1 cut(s)	767
BstPI	GGTNACC	1 cut(s)	1310
BstSCI	CCNGG	9 cut(s)	258, 304, 854, 1034, 1164, 1196, 1212, 1634, 1731
BstSFI	CTRYAG	2 cut(s)	1064, 1316
BstSLI	GKGCMC	2 cut(s)	944, 960
BstUI	CGCG	1 cut(s)	105
BstV1I	GCAGC	4 cut(s)	295, 859, 1606, 1635
BstV2I	GAAGAC	2 cut(s)	1190, 1803
BstX2I	RGATCY	1 cut(s)	382
BstYI	RGATCY	1 cut(s)	382
Bsu15I	ATCGAT	1 cut(s)	1865
Bsu36I	CCTNAGG	2 cut(s)	984, 1130
BsuTUI	ATCGAT	1 cut(s)	1865
BtgI	CCRYGG	2 cut(s)	1766, 1897
BtsCI	GGATG	8 cut(s)	10, 231, 412, 595, 832, 1404, 1746, 1762
BtsI	GCAGTG	1 cut(s)	141
BtsIMutI	CAGTG	4 cut(s)	65, 141, 1329, 1737
BveI	ACCTGC	2 cut(s)	1323, 1570
Cac8I	GCNNGC	5 cut(s)	89, 785, 815, 1369, 1579
CfoI	GCGC	3 cut(s)	93, 105, 317
Cfr10I	RCCGGY	2 cut(s)	300, 347
Cfr13I	GGNCC	9 cut(s)	176, 603, 867, 892, 949, 980, 1126, 1236, 1603
ClaI	ATCGAT	1 cut(s)	1865
CseI	GACGC	3 cut(s)	94, 1291, 1715
Csp6I	GTAC	2 cut(s)	1498, 1559
CspAI	ACCGGT	1 cut(s)	347
CviQI	GTAC	2 cut(s)	1498, 1559
DdeI	CTNAG	6 cut(s)	528, 984, 1093, 1098, 1130, 1421
DinI	GGCGCC	1 cut(s)	316
DpnI	GATC	5 cut(s)	65, 384, 1248, 1864, 1868
DpnII	GATC	5 cut(s)	63, 382, 1246, 1862, 1866
DraI	TTTAAA	1 cut(s)	367
DraIII	CACNNNGTG	1 cut(s)	964
DrdI	GACNNNNNNGTC	3 cut(s)	104, 203, 899
DriI	GACNNNNNGTC	1 cut(s)	519
DseDI	GACNNNNNNGTC	3 cut(s)	104, 203, 899
EaeI	YGGCCR	3 cut(s)	55, 1149, 1194
Eam1104I	CTCTTC	6 cut(s)	857, 930, 1020, 1035, 1254, 1316
Eam1105I	GACNNNNNGTC	1 cut(s)	519
EarI	CTCTTC	6 cut(s)	857, 930, 1020, 1035, 1254, 1316
EciI	GGCGGA	2 cut(s)	684, 826
Eco130I	CCWWGG	3 cut(s)	621, 909, 1599
Eco32I	GATATC	1 cut(s)	1108
Eco47I	GGWCC	6 cut(s)	892, 949, 980, 1126, 1236, 1603
Eco57I	CTGAAG	1 cut(s)	567
Eco81I	CCTNAGG	2 cut(s)	984, 1130
Eco88I	CYCGRG	1 cut(s)	1058
Eco91I	GGTNACC	1 cut(s)	1310
EcoNI	CCTNNNNNAGG	1 cut(s)	1298
EcoO109I	RGGNCCY	5 cut(s)	603, 949, 980, 1126, 1603
EcoO65I	GGTNACC	1 cut(s)	1310
EcoRII	CCWGG	8 cut(s)	258, 304, 854, 1034, 1164, 1196, 1212, 1634
EcoRV	GATATC	1 cut(s)	1108
EcoT14I	CCWWGG	3 cut(s)	621, 909, 1599
EgeI	GGCGCC	1 cut(s)	316
EheI	GGCGCC	1 cut(s)	316
ErhI	CCWWGG	3 cut(s)	621, 909, 1599
Esp3I	CGTCTC	1 cut(s)	755
FaqI	GGGAC	5 cut(s)	1139, 1157, 1510, 1748, 1797
FauI	CCCGC	3 cut(s)	62, 578, 1134
FblI	GTMKAC	2 cut(s)	207, 267
Fnu4HI	GCNGC	9 cut(s)	284, 342, 583, 776, 870, 873, 1595, 1649, 1919
FokI	GGATG	8 cut(s)	17, 218, 419, 602, 839, 1411, 1733, 1749
Fsp4HI	GCNGC	9 cut(s)	284, 342, 583, 776, 870, 873, 1595, 1649, 1919
FspBI	CTAG	2 cut(s)	516, 780
GlaI	GCGC	3 cut(s)	92, 104, 316
GluI	GCNGC	9 cut(s)	284, 342, 583, 776, 870, 873, 1595, 1649, 1919
GsuI	CTGGAG	2 cut(s)	1028, 1649
HaeII	RGCGCY	1 cut(s)	318
HapII	CCGG	6 cut(s)	240, 301, 348, 354, 824, 1732
HgaI	GACGC	3 cut(s)	94, 1291, 1715
HhaI	GCGC	3 cut(s)	93, 105, 317
Hin1I	GRCGYC	2 cut(s)	123, 315
Hin6I	GCGC	3 cut(s)	91, 103, 315
HinP1I	GCGC	3 cut(s)	91, 103, 315
HincII	GTYRAC	4 cut(s)	208, 268, 1281, 1714
HindII	GTYRAC	4 cut(s)	208, 268, 1281, 1714
HinfI	GANTC	9 cut(s)	149, 243, 993, 1084, 1289, 1414, 1631, 1667, 1818
HpaII	CCGG	6 cut(s)	240, 301, 348, 354, 824, 1732
HphI	GGTGA	4 cut(s)	205, 1322, 1721, 1886
Hpy166II	GTNNAC	5 cut(s)	208, 268, 958, 1281, 1714
Hpy188I	TCNGA	4 cut(s)	154, 375, 547, 1549
Hpy188III	TCNNGA	7 cut(s)	14, 610, 997, 1007, 1088, 1111, 1628
Hpy8I	GTNNAC	5 cut(s)	208, 268, 958, 1281, 1714
Hpy99I	CGWCG	8 cut(s)	125, 158, 161, 164, 176, 272, 416, 419
HpyAV	CCTTC	8 cut(s)	34, 545, 616, 861, 1456, 1665, 1696, 1899
HpyCH4III	ACNGT	4 cut(s)	1240, 1497, 1741, 1898
HpyCH4IV	ACGT	4 cut(s)	123, 1047, 1074, 1277
HpyCH4V	TGCA	6 cut(s)	563, 787, 958, 1318, 1362, 1762
HpyF10VI	GCNNNNNNNGC	6 cut(s)	502, 784, 814, 836, 1368, 1768
HpyF3I	CTNAG	6 cut(s)	528, 984, 1093, 1098, 1130, 1421
HpySE526I	ACGT	4 cut(s)	123, 1047, 1074, 1277
Hsp92I	GRCGYC	2 cut(s)	123, 315
HspAI	GCGC	3 cut(s)	91, 103, 315
KasI	GGCGCC	1 cut(s)	314
Kzo9I	GATC	5 cut(s)	63, 382, 1246, 1862, 1866
LmnI	GCTCC	4 cut(s)	464, 572, 706, 1376
Lsp1109I	GCAGC	4 cut(s)	295, 859, 1606, 1635
LweI	GCATC	4 cut(s)	630, 817, 1771, 1905
MaeI	CTAG	2 cut(s)	516, 780
MaeII	ACGT	4 cut(s)	123, 1047, 1074, 1277
MaeIII	GTNAC	2 cut(s)	1310, 1349
MalI	GATC	5 cut(s)	65, 384, 1248, 1864, 1868
MbiI	CCGCTC	2 cut(s)	467, 1141
MboI	GATC	5 cut(s)	63, 382, 1246, 1862, 1866
MfeI	CAATTG	1 cut(s)	1538
MflI	RGATCY	1 cut(s)	382
MhlI	GDGCHC	2 cut(s)	944, 960
MlsI	TGGCCA	1 cut(s)	1196
MluCI	AATT	9 cut(s)	274, 376, 500, 557, 791, 1012, 1538, 1643, 1697
MluNI	TGGCCA	1 cut(s)	1196
Mly113I	GGCGCC	1 cut(s)	315
MlyI	GAGTC	3 cut(s)	1002, 1283, 1640
MmeI	TCCRAC	3 cut(s)	177, 1422, 1773
Mox20I	TGGCCA	1 cut(s)	1196
MscI	TGGCCA	1 cut(s)	1196
MseI	TTAA	2 cut(s)	366, 645
MslI	CAYNNNNRTG	3 cut(s)	632, 1751, 1854
Msp20I	TGGCCA	1 cut(s)	1196
MspA1I	CMGCKG	1 cut(s)	872
MspCI	CTTAAG	1 cut(s)	644
MspI	CCGG	6 cut(s)	240, 301, 348, 354, 824, 1732
MspR9I	CCNGG	9 cut(s)	260, 306, 856, 1036, 1166, 1198, 1214, 1636, 1733
MunI	CAATTG	1 cut(s)	1538
Mva1269I	GAATGC	2 cut(s)	693, 1024
MvaI	CCWGG	8 cut(s)	260, 306, 856, 1036, 1166, 1198, 1214, 1636
MvnI	CGCG	1 cut(s)	105
MwoI	GCNNNNNNNGC	6 cut(s)	502, 784, 814, 836, 1368, 1768
NarI	GGCGCC	1 cut(s)	315
NciI	CCSGG	1 cut(s)	1733
NdeII	GATC	5 cut(s)	63, 382, 1246, 1862, 1866
NmeAIII	GCCGAG	3 cut(s)	291, 309, 834
NmuCI	GTSAC	1 cut(s)	1310
OliI	CACNNNNGTG	1 cut(s)	1854
PcsI	WCGNNNNNNNCGW	1 cut(s)	168
PctI	GAATGC	2 cut(s)	693, 1024
PfeI	GAWTC	6 cut(s)	149, 243, 1084, 1414, 1667, 1818
PflFI	GACNNNGTC	1 cut(s)	122
PflMI	CCANNNNNTGG	1 cut(s)	1859
PfoI	TCCNGGA	1 cut(s)	854
PinAI	ACCGGT	1 cut(s)	347
PkrI	GCNGC	9 cut(s)	285, 343, 584, 777, 871, 874, 1596, 1650, 1920
PleI	GAGTC	3 cut(s)	1001, 1283, 1639
PluTI	GGCGCC	1 cut(s)	318
PpsI	GAGTC	3 cut(s)	1001, 1283, 1639
PpuMI	RGGWCCY	4 cut(s)	949, 980, 1126, 1603
PshAI	GACNNNNGTC	1 cut(s)	767
Psp1406I	AACGTT	1 cut(s)	1277
Psp5II	RGGWCCY	4 cut(s)	949, 980, 1126, 1603
Psp6I	CCWGG	8 cut(s)	258, 304, 854, 1034, 1164, 1196, 1212, 1634
PspEI	GGTNACC	1 cut(s)	1310
PspGI	CCWGG	8 cut(s)	258, 304, 854, 1034, 1164, 1196, 1212, 1634
PspPI	GGNCC	9 cut(s)	176, 603, 867, 892, 949, 980, 1126, 1236, 1603
PspPPI	RGGWCCY	4 cut(s)	949, 980, 1126, 1603
PsrI	GAACNNNNNNTAC	2 cut(s)	641, 673
PstI	CTGCAG	1 cut(s)	1320
PsuI	RGATCY	1 cut(s)	382
PsyI	GACNNNGTC	1 cut(s)	122
RsaI	GTAC	2 cut(s)	1499, 1560
RsaNI	GTAC	2 cut(s)	1498, 1559
RseI	CAYNNNNRTG	3 cut(s)	632, 1751, 1854
SalI	GTCGAC	2 cut(s)	206, 266
SaqAI	TTAA	2 cut(s)	366, 645
SatI	GCNGC	9 cut(s)	284, 342, 583, 776, 870, 873, 1595, 1649, 1919
Sau3AI	GATC	5 cut(s)	63, 382, 1246, 1862, 1866
Sau96I	GGNCC	9 cut(s)	176, 603, 867, 892, 949, 980, 1126, 1236, 1603
ScaI	AGTACT	1 cut(s)	1499
SchI	GAGTC	3 cut(s)	1002, 1283, 1640
ScrFI	CCNGG	9 cut(s)	260, 306, 856, 1036, 1166, 1198, 1214, 1636, 1733
SduI	GDGCHC	2 cut(s)	944, 960
SfaNI	GCATC	4 cut(s)	630, 817, 1771, 1905
SfcI	CTRYAG	2 cut(s)	1064, 1316
SfoI	GGCGCC	1 cut(s)	316
SinI	GGWCC	6 cut(s)	892, 949, 980, 1126, 1236, 1603
SmiMI	CAYNNNNRTG	3 cut(s)	632, 1751, 1854
SmlI	CTYRAG	2 cut(s)	506, 644
SmoI	CTYRAG	2 cut(s)	506, 644
SpeI	ACTAGT	1 cut(s)	515
Sse9I	AATT	9 cut(s)	274, 376, 500, 557, 791, 1012, 1538, 1643, 1697
SspDI	GGCGCC	1 cut(s)	314
SspMI	CTAG	2 cut(s)	516, 780
StyD4I	CCNGG	9 cut(s)	258, 304, 854, 1034, 1164, 1196, 1212, 1634, 1731
StyI	CCWWGG	3 cut(s)	621, 909, 1599
TaaI	ACNGT	4 cut(s)	1240, 1497, 1741, 1898
TaiI	ACGT	4 cut(s)	126, 1050, 1077, 1280
TaqI	TCGA	7 cut(s)	207, 267, 535, 609, 991, 1249, 1865
TaqII	GACCGA	1 cut(s)	213
TasI	AATT	9 cut(s)	274, 376, 500, 557, 791, 1012, 1538, 1643, 1697
TatI	WGTACW	1 cut(s)	1497
TauI	GCSGC	5 cut(s)	344, 585, 778, 872, 1921
TfiI	GAWTC	6 cut(s)	149, 243, 1084, 1414, 1667, 1818
Tru1I	TTAA	2 cut(s)	366, 645
Tru9I	TTAA	2 cut(s)	366, 645
TscAI	CASTG	4 cut(s)	65, 148, 1336, 1744
TseFI	GTSAC	1 cut(s)	1310
TseI	GCWGC	4 cut(s)	283, 872, 1594, 1648
Tsp45I	GTSAC	1 cut(s)	1310
TspDTI	ATGAA	3 cut(s)	220, 650, 1463
TspGWI	ACGGA	4 cut(s)	375, 779, 1202, 1755
TspRI	CASTG	4 cut(s)	65, 148, 1336, 1744
Tth111I	GACNNNGTC	1 cut(s)	122
Van91I	CCANNNNNTGG	1 cut(s)	1859
Vha464I	CTTAAG	1 cut(s)	644
VneI	GTGCAC	1 cut(s)	956
VpaK11BI	GGWCC	6 cut(s)	892, 949, 980, 1126, 1236, 1603
XagI	CCTNNNNNAGG	1 cut(s)	1298
XapI	RAATTY	2 cut(s)	376, 1012
XmiI	GTMKAC	2 cut(s)	207, 267
XspI	CTAG	2 cut(s)	516, 780
ZraI	GACGTC	1 cut(s)	124
ZrmI	AGTACT	1 cut(s)	1499

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.