FvH4_5g28402

Cell cycle regulated microtubule associated protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
19558348 .. 19559969
1622 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g28402.t1

Sequence Viewer

Length: 204 bp
ATGAATTATTCCAAGAACGGAGATCTTCCAAGTGATTCCAAAAACCACCAGACAGCCAAAAAGATATCAAGTATGGTCAGAAACCCATCAGGGCCAAGGGGAAAACGTCACTTGCACGCTTCACAAATTAAACAGTATACTATCAAAAGAGAAGAGAACGTGAAAAATGCAACTGGCACATCCATGTTAGCTCAGGAGAATTAG

Protein Analysis

68

Amino Acids

7.51

Weight (kDa)

10.17

Isoelectric Point (pI)

37.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 137
AluBI AGCT 1 cut(s) 191
AluI AGCT 1 cut(s) 191
AoxI GGCC 1 cut(s) 92
AspS9I GGNCC 1 cut(s) 92
BccI CCATC 1 cut(s) 94
BglII AGATCT 1 cut(s) 22
BmgT120I GGNCC 1 cut(s) 92
Bpu10I CCTNAGC 1 cut(s) 192
BsaJI CCNNGG 1 cut(s) 95
Bse1I ACTGG 1 cut(s) 178
BseDI CCNNGG 1 cut(s) 95
BseGI GGATG 1 cut(s) 179
BseNI ACTGG 1 cut(s) 178
BshFI GGCC 1 cut(s) 94
BsnI GGCC 1 cut(s) 94
Bsp143I GATC 1 cut(s) 22
BspANI GGCC 1 cut(s) 94
BsrI ACTGG 1 cut(s) 178
BssECI CCNNGG 1 cut(s) 95
BssMI GATC 1 cut(s) 22
BssNAI GTATAC 1 cut(s) 138
BssT1I CCWWGG 1 cut(s) 95
Bst1107I GTATAC 1 cut(s) 138
Bst4CI ACNGT 1 cut(s) 135
Bst6I CTCTTC 1 cut(s) 147
BstC8I GCNNGC 1 cut(s) 117
BstDEI CTNAG 1 cut(s) 192
BstF5I GGATG 1 cut(s) 179
BstKTI GATC 1 cut(s) 25
BstMBI GATC 1 cut(s) 22
BstX2I RGATCY 1 cut(s) 22
BstYI RGATCY 1 cut(s) 22
BstZ17I GTATAC 1 cut(s) 138
BsuRI GGCC 1 cut(s) 94
BtsCI GGATG 1 cut(s) 179
Cac8I GCNNGC 1 cut(s) 117
Cfr13I GGNCC 1 cut(s) 92
CviAII CATG 1 cut(s) 184
CviJI RGCY 3 cut(s) 56, 94, 191
CviKI_1 RGCY 3 cut(s) 56, 94, 191
DdeI CTNAG 1 cut(s) 192
DpnI GATC 1 cut(s) 24
DpnII GATC 1 cut(s) 22
Eam1104I CTCTTC 1 cut(s) 147
EarI CTCTTC 1 cut(s) 147
Eco130I CCWWGG 1 cut(s) 95
Eco32I GATATC 1 cut(s) 66
EcoRV GATATC 1 cut(s) 66
EcoT14I CCWWGG 1 cut(s) 95
ErhI CCWWGG 1 cut(s) 95
FaeI CATG 1 cut(s) 187
FaiI YATR 3 cut(s) 74, 138, 185
FatI CATG 1 cut(s) 183
FblI GTMKAC 1 cut(s) 137
FokI GGATG 1 cut(s) 166
HaeIII GGCC 1 cut(s) 94
Hin1II CATG 1 cut(s) 187
HinfI GANTC 1 cut(s) 35
Hpy166II GTNNAC 1 cut(s) 138
Hpy188I TCNGA 1 cut(s) 80
Hpy188III TCNNGA 1 cut(s) 194
Hpy8I GTNNAC 1 cut(s) 138
HpyCH4III ACNGT 1 cut(s) 135
HpyCH4IV ACGT 2 cut(s) 106, 159
HpyCH4V TGCA 2 cut(s) 115, 170
HpyF3I CTNAG 1 cut(s) 192
HpySE526I ACGT 2 cut(s) 106, 159
Hsp92II CATG 1 cut(s) 187
Kzo9I GATC 1 cut(s) 22
LpnPI CCDG 4 cut(s) 62, 75, 159, 179
MaeII ACGT 2 cut(s) 106, 159
MaeIII GTNAC 1 cut(s) 107
MalI GATC 1 cut(s) 24
MboI GATC 1 cut(s) 22
MboII GAAGA 2 cut(s) 17, 164
MflI RGATCY 1 cut(s) 22
MluCI AATT 3 cut(s) 4, 126, 199
MseI TTAA 1 cut(s) 129
MslI CAYNNNNRTG 1 cut(s) 182
NdeII GATC 1 cut(s) 22
NlaIII CATG 1 cut(s) 187
NmuCI GTSAC 1 cut(s) 107
PfeI GAWTC 1 cut(s) 35
PspPI GGNCC 1 cut(s) 92
PsuI RGATCY 1 cut(s) 22
RseI CAYNNNNRTG 1 cut(s) 182
SaqAI TTAA 1 cut(s) 129
Sau3AI GATC 1 cut(s) 22
Sau96I GGNCC 1 cut(s) 92
SetI ASST 3 cut(s) 109, 162, 193
SmiMI CAYNNNNRTG 1 cut(s) 182
Sse9I AATT 3 cut(s) 4, 126, 199
StyI CCWWGG 1 cut(s) 95
TaaI ACNGT 1 cut(s) 135
TaiI ACGT 2 cut(s) 109, 162
TasI AATT 3 cut(s) 4, 126, 199
TfiI GAWTC 1 cut(s) 35
Tru1I TTAA 1 cut(s) 129
Tru9I TTAA 1 cut(s) 129
TseFI GTSAC 1 cut(s) 107
Tsp45I GTSAC 1 cut(s) 107
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 33
XmiI GTMKAC 1 cut(s) 137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.