Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000200.1

Orthogroup ID

OG0000750

Physical Location & Seq

Genomic Coordinates Reverse (-)

100878 .. 105804

Gene Structure 4927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000200.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

atgatgatcgacgagatttatgagttctcggccccgcgcttcttcgatttcatcaaggacgagaccgacgatgacaagatcaacgccgagctctggttcgactccgccacagcctacgccccttcccccttcatgcctagaatcaagactggtagatcctttacagtagagagcatgtgcgactttactgaagcggaaaatatgcagaagaaccttgaatcatcctcagctgatgatgattctacggaaaccaagactgagtcgaagatcactcctgaattgaaggaagaaacaattcccacggaggctaaagaagaaaacagtacaagacaagacaatatgatttctgctgataaagtcgaggaaaaatgtactatagatgatggaagtgttttggccactgcggtatctttgaataagggaactgatatgacaaatgagaaggagaatagtaattccgtagcttgtactccaaaaccacccatgaattattccaagaagggagatcttctgagtgattccaaaaagcaccagggagctaaaaagatatcaagtatggttagaaacccatcagggctaaggggaaaaagtcacttgcactcttcacaaactaagaatgtcaaaccgtatactatgaaaagagaagaaaatgtgaaaaatataactggcacacccatgttagctcaggagaatcaggcaattaagcggcagaagttggatggtgggagatctagacagattcttaatcccaaaccccaaacattgccccacaagtcaaaattgggttataccagtggcatgcattcttcatcaactgctattaaaactcaaaaagaggacagaaagatgtatgttcgggaaccagcagcaccctttgtttcaatggcagaaatgatgaacaggttccaatcaagtaccagagacttgtcactgccacacagttctctttctcatatgaagcccaaactcaccttaacaaggccaaaggagcctgaatttgaaacatcccagcgtgtccgctcagtaagagtaaagagtactgccgagcttgaagaagagatgatggccaaaattccaaagtttaaggctcgacctgtaaacaaaaagattcttgaagcgccatccttacctgcaaagccaagaagtacaccacagccacctgagtttcaggaattccatttagagactatggcaagggccaatcaaaacgcagaaacatcctcagtagcttcaactgatgtgtcacgacagaacaaacaatcgaagccccatcatcttactgaaccgaaaactccaacgttacatacattattgagggcccgtccacccagggtgaaaacttcattggaaattgagcaggaagaacttgaaaagatcccaaaattcaaagcgaagcctcttaataagaagatatttgaaagtaaaggagatctcgggatgttctgtaatgccaagaaacaagtgactaaacctcaggaatttcactttgcaacaaatgaaagaataccaccaccaccaccaccttcagccattcatgatctatttgataagttgtctttgaactcagagcccctccagaatccaattccaagaaacacaatgccaaatcctttccatctccatacagaggaaagaggagctgagaaagaaaggaaattttttactgaagttatgcagaagcaactggaagaagaaagagctagggttcccaaagctaatccatatccttataccactgattaccctgtgatcccaccaaagccagagcccaaggaatgcacaaaaccggaacctttccaactagagagcttagcgaggcatgaggaggaaatgcaaagggaaatggaagaaagacggaggatagagatggaagaagctcagatgagggttttcaaggcacaaccaatcttgaaagaggacccaattccagttcccgagagagttcgcaaacctctaacagaagttcaagaattcaatctgaatgttaataatcgggcagtgcacagagcagaatttgatcacaaggttaaggagaaagagataatatataagagatatagagaagagagtgaagcagcaaggatgttagaggaagagaaagcattgaaacaactgagaaggacgctggtaccccatgcaaggccagtgcctaattttgagcatccattctgcccccagaagtgtccaagggaaacaacaaaagcaaagtcaccaaatctgcgagttctacagcggcaagaaaggcgaaggatgatgatcaaatccgccacttccagtgctgctgcccagatgagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0007346 GO:0008017 GO:0008092 GO:0008150 GO:0009507 GO:0009524 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010564 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022607 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032886 GO:0033043 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0050789 GO:0050794 GO:0051128 GO:0051225 GO:0051493 GO:0051726 GO:0060236 GO:0065007 GO:0070013 GO:0070507 GO:0070925 GO:0071840 GO:0090224 GO:0090307 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPX2 TPX2_importin

Protein Analysis

765

Amino Acids

87.91

Weight (kDa)

9.22

Isoelectric Point (pI)

59.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03780 AT1G03780 AT1G03780
fragaria_vesca	FvH4_2g11956 FvH4_5g28370 FvH4_5g28401 FvH4_5g28402 FvH4_5g28440 FvH4_5g28450 FvH4_5g28450 FvH4_5g28471 FvH4_5g28480 FvH4_5g28561 FvH4_6g25610 FvH4_6g25610 FvH4_6g25690 FvH4_6g25731 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_c15g00040 FvH4_c17g00020 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090
malus_domestica	MD09G1243900.v1.1 MD17G1235800.v1.1
prunus_persica	Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1
pyrus_communis	pycom17g23880
rosa_chinensis	RchiOBHm_Chr2g0127601
rosa_laevigata	RLG00000018552 RLG00000018951
rosa_multiflora	Rmu_ssc0000200.1_g000020
rosa_roxburghii	Rroxscaffold_2G00116560 Rroxscaffold_2G00123480
rosa_rugosa	Rorug02G0272600
rosa_samantha	Rh2AG324600 Rh2BG333900 Rh2CG312100 Rh2DG352100
rosa_wichuraiana	Rw2G026360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1138
Acc65I	GGTACC	1 cut(s)	2128
AccB1I	GGYRCC	1 cut(s)	2128
AccBSI	CCGCTC	1 cut(s)	1020
AccI	GTMKAC	1 cut(s)	629
AccII	CGCG	1 cut(s)	37
AciI	CCGC	8 cut(s)	35, 105, 194, 404, 706, 1018, 2233, 2265
AclI	AACGTT	1 cut(s)	1298
AclWI	GGATC	3 cut(s)	150, 1369, 1744
AcoI	YGGCCR	2 cut(s)	396, 1065
AcsI	RAATTY	8 cut(s)	995, 1071, 1172, 1382, 1478, 1655, 1970, 2012
AcuI	CTGAAG	3 cut(s)	210, 1509, 1686
AfaI	GTAC	7 cut(s)	325, 373, 469, 916, 1039, 1147, 2130
AfiI	CCNNNNNNNGG	4 cut(s)	93, 978, 1627, 2139
AjnI	CCWGG	2 cut(s)	531, 1328
AjuI	GAANNNNNNNTTGG	2 cut(s)	1328, 1360
Alw21I	GWGCWC	2 cut(s)	93, 2004
Alw26I	GTCTC	3 cut(s)	56, 915, 1178
Alw44I	GTGCAC	1 cut(s)	2000
AlwI	GGATC	3 cut(s)	150, 1369, 1744
Ama87I	CYCGRG	2 cut(s)	1433, 1934
AoxI	GGCC	7 cut(s)	30, 396, 980, 1065, 1197, 1317, 2141
ApaI	GGGCCC	1 cut(s)	1321
ApaLI	GTGCAC	1 cut(s)	2000
ApeKI	GCWGC	4 cut(s)	866, 2075, 2279, 2282
ApoI	RAATTY	8 cut(s)	995, 1071, 1172, 1382, 1478, 1655, 1970, 2012
ArsI	GACNNNNNNTTYG	2 cut(s)	2192, 2224
Asp700I	GAANNNNTTC	2 cut(s)	294, 902
Asp718I	GGTACC	1 cut(s)	2128
AspLEI	GCGC	2 cut(s)	39, 1120
AspS9I	GGNCC	5 cut(s)	31, 1197, 1317, 1318, 1918
AsuHPI	GGTGA	3 cut(s)	961, 1345, 2202
AvaI	CYCGRG	2 cut(s)	1433, 1934
AvaII	GGWCC	1 cut(s)	1918
AxyI	CCTNAGG	1 cut(s)	1473
BaeGI	GKGCMC	2 cut(s)	1321, 2004
BaeI	ACNNNNGTAYC	4 cut(s)	390, 423, 2112, 2145
BalI	TGGCCA	2 cut(s)	398, 1067
BanI	GGYRCC	1 cut(s)	2128
BanII	GRGCYC	4 cut(s)	93, 1321, 1572, 1770
Bbv12I	GWGCWC	2 cut(s)	93, 2004
BbvCI	CCTCAGC	1 cut(s)	226
BbvI	GCAGC	4 cut(s)	878, 2087, 2266, 2269
BccI	CCATC	8 cut(s)	377, 577, 713, 1057, 1129, 1278, 1623, 1861
BciT130I	CCWGG	2 cut(s)	533, 1330
BclI	TGATCA	2 cut(s)	2017, 2256
BcoDI	GTCTC	3 cut(s)	56, 915, 1178
BfaI	CTAG	4 cut(s)	138, 732, 1701, 1802
BfmI	CTRYAG	2 cut(s)	375, 2228
BfoI	RGCGCY	1 cut(s)	1121
BfuAI	ACCTGC	1 cut(s)	1138
BglII	AGATCT	3 cut(s)	505, 728, 1429
BisI	GCNGC	6 cut(s)	707, 867, 2076, 2234, 2280, 2283
BlpI	GCTNAGC	1 cut(s)	1810
BlsI	GCNGC	6 cut(s)	708, 868, 2077, 2235, 2281, 2284
BmcAI	AGTACT	1 cut(s)	1039
Bme1390I	CCNGG	2 cut(s)	533, 1330
Bme18I	GGWCC	1 cut(s)	1918
BmeT110I	CYCGRG	2 cut(s)	1433, 1934
BmgT120I	GGNCC	5 cut(s)	31, 1197, 1317, 1318, 1918
BmiI	GGNNCC	9 cut(s)	33, 861, 905, 990, 1319, 1707, 1791, 1920, 2130
BmrFI	CCNGG	2 cut(s)	533, 1330
BmsI	GCATC	1 cut(s)	2170
BpmI	CTGGAG	1 cut(s)	1559
Bpu10I	CCTNAGC	3 cut(s)	226, 578, 684
Bpu1102I	GCTNAGC	1 cut(s)	1810
BsaBI	GATNNNNATC	1 cut(s)	2255
BsaI	GGTCTC	1 cut(s)	56
BsaJI	CCNNGG	6 cut(s)	300, 532, 1328, 1329, 1770, 2186
BsaWI	WCCGGW	1 cut(s)	1786
Bsc4I	CCNNNNNNNGG	4 cut(s)	93, 978, 1627, 2139
Bse1I	ACTGG	7 cut(s)	154, 670, 792, 1689, 1928, 2144, 2274
Bse21I	CCTNAGG	1 cut(s)	1473
Bse3DI	GCAATG	1 cut(s)	761
Bse8I	GATNNNNATC	1 cut(s)	2255
BseBI	CCWGG	2 cut(s)	533, 1330
BseDI	CCNNGG	6 cut(s)	300, 532, 1328, 1329, 1770, 2186
BseGI	GGATG	9 cut(s)	221, 724, 1004, 1121, 1217, 1443, 2088, 2161, 2256
BseJI	GATNNNNATC	1 cut(s)	2255
BseLI	CCNNNNNNNGG	4 cut(s)	93, 978, 1627, 2139
BseMI	GCAATG	1 cut(s)	761
BseNI	ACTGG	7 cut(s)	154, 670, 792, 1689, 1928, 2144, 2274
BseRI	GAGGAG	2 cut(s)	1650, 1838
BseSI	GKGCMC	2 cut(s)	1321, 2004
BseXI	GCAGC	4 cut(s)	878, 2087, 2266, 2269
BseYI	CCCAGC	1 cut(s)	1008
Bsh1236I	CGCG	1 cut(s)	37
BshFI	GGCC	7 cut(s)	32, 398, 982, 1067, 1199, 1319, 2143
BshNI	GGYRCC	1 cut(s)	2128
BsiHKAI	GWGCWC	2 cut(s)	93, 2004
BsiHKCI	CYCGRG	2 cut(s)	1433, 1934
BsiSI	CCGG	1 cut(s)	1787
BslI	CCNNNNNNNGG	4 cut(s)	93, 978, 1627, 2139
BsmAI	GTCTC	3 cut(s)	56, 915, 1178
BsmI	GAATGC	2 cut(s)	802, 1781
BsnI	GGCC	7 cut(s)	32, 398, 982, 1067, 1199, 1319, 2143
Bso31I	GGTCTC	1 cut(s)	56
BsoBI	CYCGRG	2 cut(s)	1433, 1934
Bsp120I	GGGCCC	1 cut(s)	1317
Bsp1286I	GDGCHC	5 cut(s)	93, 1321, 1572, 1770, 2004
Bsp1720I	GCTNAGC	1 cut(s)	1810
BspACI	CCGC	8 cut(s)	35, 105, 194, 404, 706, 1018, 2233, 2265
BspANI	GGCC	7 cut(s)	32, 398, 982, 1067, 1199, 1319, 2143
BspFNI	CGCG	1 cut(s)	37
BspHI	TCATGA	1 cut(s)	1534
BspLI	GGNNCC	9 cut(s)	33, 861, 905, 990, 1319, 1707, 1791, 1920, 2130
BspMI	ACCTGC	1 cut(s)	1138
BspPI	GGATC	3 cut(s)	150, 1369, 1744
BspT107I	GGYRCC	1 cut(s)	2128
BspTNI	GGTCTC	1 cut(s)	56
BsrBI	CCGCTC	1 cut(s)	1020
BsrDI	GCAATG	1 cut(s)	761
BsrI	ACTGG	7 cut(s)	154, 670, 792, 1689, 1928, 2144, 2274
BssECI	CCNNGG	6 cut(s)	300, 532, 1328, 1329, 1770, 2186
BssNAI	GTATAC	1 cut(s)	630
BssT1I	CCWWGG	2 cut(s)	1770, 2186
Bst1107I	GTATAC	1 cut(s)	630
Bst2UI	CCWGG	2 cut(s)	533, 1330
Bst4CI	ACNGT	4 cut(s)	166, 323, 627, 941
Bst6I	CTCTTC	4 cut(s)	607, 1050, 2058, 2088
BstC8I	GCNNGC	1 cut(s)	800
BstDSI	CCRYGG	1 cut(s)	300
BstENI	CCTNNNNNAGG	1 cut(s)	976
BstF5I	GGATG	9 cut(s)	221, 724, 1004, 1121, 1217, 1443, 2088, 2161, 2256
BstFNI	CGCG	1 cut(s)	37
BstH2I	RGCGCY	1 cut(s)	1121
BstHHI	GCGC	2 cut(s)	39, 1120
BstMAI	GTCTC	3 cut(s)	56, 915, 1178
BstMWI	GCNNNNNNNGC	2 cut(s)	988, 2242
BstNI	CCWGG	2 cut(s)	533, 1330
BstNSI	RCATGY	2 cut(s)	178, 802
BstSCI	CCNGG	2 cut(s)	531, 1328
BstSFI	CTRYAG	2 cut(s)	375, 2228
BstSLI	GKGCMC	2 cut(s)	1321, 2004
BstUI	CGCG	1 cut(s)	37
BstV1I	GCAGC	4 cut(s)	878, 2087, 2266, 2269
BstX2I	RGATCY	5 cut(s)	155, 505, 728, 1374, 1429
BstYI	RGATCY	5 cut(s)	155, 505, 728, 1374, 1429
BstZ17I	GTATAC	1 cut(s)	630
Bsu36I	CCTNAGG	1 cut(s)	1473
BsuRI	GGCC	7 cut(s)	32, 398, 982, 1067, 1199, 1319, 2143
BtgI	CCRYGG	1 cut(s)	300
BtsCI	GGATG	9 cut(s)	221, 724, 1004, 1121, 1217, 1443, 2088, 2161, 2256
BtsI	GCAGTG	3 cut(s)	399, 929, 2004
BtsIMutI	CAGTG	7 cut(s)	399, 799, 929, 1734, 2004, 2151, 2281
BveI	ACCTGC	1 cut(s)	1138
Cac8I	GCNNGC	1 cut(s)	800
CciI	TCATGA	1 cut(s)	1534
CfoI	GCGC	2 cut(s)	39, 1120
Cfr13I	GGNCC	5 cut(s)	31, 1197, 1317, 1318, 1918
CseI	GACGC	1 cut(s)	2131
Csp6I	GTAC	7 cut(s)	324, 372, 468, 915, 1038, 1146, 2129
CviAII	CATG	8 cut(s)	133, 175, 484, 676, 799, 1535, 1820, 2135
CviQI	GTAC	7 cut(s)	324, 372, 468, 915, 1038, 1146, 2129
EaeI	YGGCCR	2 cut(s)	396, 1065
Eam1104I	CTCTTC	4 cut(s)	607, 1050, 2058, 2088
EarI	CTCTTC	4 cut(s)	607, 1050, 2058, 2088
EciI	GGCGGA	2 cut(s)	94, 2254
Ecl136II	GAGCTC	1 cut(s)	91
Eco130I	CCWWGG	2 cut(s)	1770, 2186
Eco24I	GRGCYC	4 cut(s)	93, 1321, 1572, 1770
Eco31I	GGTCTC	1 cut(s)	56
Eco32I	GATATC	1 cut(s)	549
Eco47I	GGWCC	1 cut(s)	1918
Eco53kI	GAGCTC	1 cut(s)	91
Eco57I	CTGAAG	3 cut(s)	210, 1509, 1686
Eco81I	CCTNAGG	1 cut(s)	1473
Eco88I	CYCGRG	2 cut(s)	1433, 1934
EcoICRI	GAGCTC	1 cut(s)	91
EcoNI	CCTNNNNNAGG	1 cut(s)	976
EcoO109I	RGGNCCY	2 cut(s)	1317, 1918
EcoRI	GAATTC	2 cut(s)	1172, 1970
EcoRII	CCWGG	2 cut(s)	531, 1328
EcoRV	GATATC	1 cut(s)	549
EcoT14I	CCWWGG	2 cut(s)	1770, 2186
EcoT22I	ATGCAT	1 cut(s)	804
EcoT38I	GRGCYC	4 cut(s)	93, 1321, 1572, 1770
ErhI	CCWWGG	2 cut(s)	1770, 2186
FaeI	CATG	8 cut(s)	136, 178, 487, 679, 802, 1538, 1823, 2138
FatI	CATG	8 cut(s)	132, 174, 483, 675, 798, 1534, 1819, 2134
FauI	CCCGC	1 cut(s)	42
FauNDI	CATATG	1 cut(s)	954
FbaI	TGATCA	2 cut(s)	2017, 2256
FblI	GTMKAC	1 cut(s)	629
Fnu4HI	GCNGC	6 cut(s)	707, 867, 2076, 2234, 2280, 2283
FokI	GGATG	9 cut(s)	208, 731, 991, 1108, 1204, 1450, 2095, 2148, 2263
FriOI	GRGCYC	4 cut(s)	93, 1321, 1572, 1770
Fsp4HI	GCNGC	6 cut(s)	707, 867, 2076, 2234, 2280, 2283
FspBI	CTAG	4 cut(s)	138, 732, 1701, 1802
GlaI	GCGC	2 cut(s)	38, 1119
GluI	GCNGC	6 cut(s)	707, 867, 2076, 2234, 2280, 2283
GsaI	CCCAGC	1 cut(s)	1012
GsuI	CTGGAG	1 cut(s)	1559
HaeII	RGCGCY	1 cut(s)	1121
HaeIII	GGCC	7 cut(s)	32, 398, 982, 1067, 1199, 1319, 2143
HapII	CCGG	1 cut(s)	1787
HgaI	GACGC	1 cut(s)	2131
HhaI	GCGC	2 cut(s)	39, 1120
Hin1II	CATG	8 cut(s)	136, 178, 487, 679, 802, 1538, 1823, 2138
Hin6I	GCGC	2 cut(s)	37, 1118
HinP1I	GCGC	2 cut(s)	37, 1118
HpaII	CCGG	1 cut(s)	1787
HphI	GGTGA	3 cut(s)	961, 1345, 2202
Hpy166II	GTNNAC	5 cut(s)	630, 1099, 1148, 1325, 2002
Hpy188I	TCNGA	4 cut(s)	513, 1567, 1881, 1980
Hpy8I	GTNNAC	5 cut(s)	630, 1099, 1148, 1325, 2002
Hpy99I	CGWCG	2 cut(s)	14, 71
HpyAV	CCTTC	8 cut(s)	132, 139, 277, 436, 493, 1533, 2112, 2241
HpyCH4III	ACNGT	4 cut(s)	166, 323, 627, 941
HpyCH4IV	ACGT	1 cut(s)	1298
HpyF10VI	GCNNNNNNNGC	2 cut(s)	988, 2242
HpySE526I	ACGT	1 cut(s)	1298
Hsp92II	CATG	8 cut(s)	136, 178, 487, 679, 802, 1538, 1823, 2138
HspAI	GCGC	2 cut(s)	37, 1118
KpnI	GGTACC	1 cut(s)	2132
Ksp22I	TGATCA	2 cut(s)	2017, 2256
LmnI	GCTCC	3 cut(s)	536, 988, 1637
Lsp1109I	GCAGC	4 cut(s)	878, 2087, 2266, 2269
LweI	GCATC	1 cut(s)	2170
MaeI	CTAG	4 cut(s)	138, 732, 1701, 1802
MaeII	ACGT	1 cut(s)	1298
MaeIII	GTNAC	6 cut(s)	590, 927, 1242, 1299, 1462, 2208
MbiI	CCGCTC	1 cut(s)	1020
MflI	RGATCY	5 cut(s)	155, 505, 728, 1374, 1429
MhlI	GDGCHC	5 cut(s)	93, 1321, 1572, 1770, 2004
MlsI	TGGCCA	2 cut(s)	398, 1067
MluNI	TGGCCA	2 cut(s)	398, 1067
MlyI	GAGTC	2 cut(s)	95, 269
MmeI	TCCRAC	3 cut(s)	696, 1319, 1822
Mox20I	TGGCCA	2 cut(s)	398, 1067
Mph1103I	ATGCAT	1 cut(s)	804
MroXI	GAANNNNTTC	2 cut(s)	294, 902
MscI	TGGCCA	2 cut(s)	398, 1067
MseI	TTAA	8 cut(s)	702, 744, 822, 974, 1083, 1401, 1986, 2028
MslI	CAYNNNNRTG	1 cut(s)	674
Msp20I	TGGCCA	2 cut(s)	398, 1067
MspA1I	CMGCKG	2 cut(s)	230, 2233
MspI	CCGG	1 cut(s)	1787
MspR9I	CCNGG	2 cut(s)	533, 1330
Mva1269I	GAATGC	2 cut(s)	802, 1781
MvaI	CCWGG	2 cut(s)	533, 1330
MvnI	CGCG	1 cut(s)	37
MwoI	GCNNNNNNNGC	2 cut(s)	988, 2242
NdeI	CATATG	1 cut(s)	954
NlaIII	CATG	8 cut(s)	136, 178, 487, 679, 802, 1538, 1823, 2138
NlaIV	GGNNCC	9 cut(s)	33, 861, 905, 990, 1319, 1707, 1791, 1920, 2130
NmeAIII	GCCGAG	3 cut(s)	8, 112, 1069
NmuCI	GTSAC	5 cut(s)	590, 927, 1242, 1462, 2208
NsiI	ATGCAT	1 cut(s)	804
NspI	RCATGY	2 cut(s)	178, 802
PaeI	GCATGC	1 cut(s)	802
PagI	TCATGA	1 cut(s)	1534
PasI	CCCWGGG	1 cut(s)	1329
PcsI	WCGNNNNNNNCGW	1 cut(s)	66
PctI	GAATGC	2 cut(s)	802, 1781
PdmI	GAANNNNTTC	2 cut(s)	294, 902
PfeI	GAWTC	8 cut(s)	141, 218, 239, 518, 691, 739, 1108, 1579
PflFI	GACNNNGTC	1 cut(s)	259
PkrI	GCNGC	6 cut(s)	708, 868, 2077, 2235, 2281, 2284
PleI	GAGTC	2 cut(s)	95, 268
PpsI	GAGTC	2 cut(s)	95, 268
PpuMI	RGGWCCY	1 cut(s)	1918
Psp124BI	GAGCTC	1 cut(s)	93
Psp1406I	AACGTT	1 cut(s)	1298
Psp5II	RGGWCCY	1 cut(s)	1918
Psp6I	CCWGG	2 cut(s)	531, 1328
PspFI	CCCAGC	1 cut(s)	1008
PspGI	CCWGG	2 cut(s)	531, 1328
PspN4I	GGNNCC	9 cut(s)	33, 861, 905, 990, 1319, 1707, 1791, 1920, 2130
PspOMI	GGGCCC	1 cut(s)	1317
PspPI	GGNCC	5 cut(s)	31, 1197, 1317, 1318, 1918
PspPPI	RGGWCCY	1 cut(s)	1918
PsuI	RGATCY	5 cut(s)	155, 505, 728, 1374, 1429
PsyI	GACNNNGTC	1 cut(s)	259
PvuII	CAGCTG	1 cut(s)	230
RsaI	GTAC	7 cut(s)	325, 373, 469, 916, 1039, 1147, 2130
RsaNI	GTAC	7 cut(s)	324, 372, 468, 915, 1038, 1146, 2129
RseI	CAYNNNNRTG	1 cut(s)	674
SacI	GAGCTC	1 cut(s)	93
SaqAI	TTAA	8 cut(s)	702, 744, 822, 974, 1083, 1401, 1986, 2028
SatI	GCNGC	6 cut(s)	707, 867, 2076, 2234, 2280, 2283
Sau96I	GGNCC	5 cut(s)	31, 1197, 1317, 1318, 1918
ScaI	AGTACT	1 cut(s)	1039
SchI	GAGTC	2 cut(s)	95, 269
ScrFI	CCNGG	2 cut(s)	533, 1330
SduI	GDGCHC	5 cut(s)	93, 1321, 1572, 1770, 2004
SfaNI	GCATC	1 cut(s)	2170
SfcI	CTRYAG	2 cut(s)	375, 2228
SinI	GGWCC	1 cut(s)	1918
SmiMI	CAYNNNNRTG	1 cut(s)	674
SphI	GCATGC	1 cut(s)	802
SsiI	CCGC	8 cut(s)	35, 105, 194, 404, 706, 1018, 2233, 2265
SspMI	CTAG	4 cut(s)	138, 732, 1701, 1802
SstI	GAGCTC	1 cut(s)	93
StyD4I	CCNGG	2 cut(s)	531, 1328
StyI	CCWWGG	2 cut(s)	1770, 2186
TaaI	ACNGT	4 cut(s)	166, 323, 627, 941
TaiI	ACGT	1 cut(s)	1301
TaqI	TCGA	7 cut(s)	9, 45, 99, 263, 360, 1090, 1262
TaqII	GACCGA	1 cut(s)	80
TatI	WGTACW	5 cut(s)	323, 371, 467, 1037, 1145
TauI	GCSGC	2 cut(s)	709, 2236
TfiI	GAWTC	8 cut(s)	141, 218, 239, 518, 691, 739, 1108, 1579
Tru1I	TTAA	8 cut(s)	702, 744, 822, 974, 1083, 1401, 1986, 2028
Tru9I	TTAA	8 cut(s)	702, 744, 822, 974, 1083, 1401, 1986, 2028
TscAI	CASTG	7 cut(s)	406, 799, 936, 1741, 2004, 2151, 2281
TseFI	GTSAC	5 cut(s)	590, 927, 1242, 1462, 2208
TseI	GCWGC	4 cut(s)	866, 2075, 2279, 2282
Tsp45I	GTSAC	5 cut(s)	590, 927, 1242, 1462, 2208
TspGWI	ACGGA	4 cut(s)	260, 317, 448, 1870
TspRI	CASTG	7 cut(s)	406, 799, 936, 1741, 2004, 2151, 2281
Tth111I	GACNNNGTC	1 cut(s)	259
VneI	GTGCAC	1 cut(s)	2000
VpaK11BI	GGWCC	1 cut(s)	1918
XagI	CCTNNNNNAGG	1 cut(s)	976
XapI	RAATTY	8 cut(s)	995, 1071, 1172, 1382, 1478, 1655, 1970, 2012
XbaI	TCTAGA	1 cut(s)	731
XceI	RCATGY	2 cut(s)	178, 802
XmiI	GTMKAC	1 cut(s)	629
XmnI	GAANNNNTTC	2 cut(s)	294, 902
XspI	CTAG	4 cut(s)	138, 732, 1701, 1802
ZrmI	AGTACT	1 cut(s)	1039
Zsp2I	ATGCAT	1 cut(s)	804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.