Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000750

Physical Location & Seq

Genomic Coordinates Reverse (-)

46692336 .. 46697746

Gene Structure 5411 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG324600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGCCGCCGGCGACGGAGGAACCTAACACGACGGCGTCCTCGACGATGATGATCGACGAGATTTATGAGTTCTCGGCCCCGCGCTTCTTCGATTTCATCAAGGACGAGACCGACGACGACAAGATCAAGGCCGAGCTCTGGTTCGACTCCGCCACAGCCTACGCCCCTTCCCCCTTCATGCCTAGAATCAAGACTGGTAGATCCTTTACAGTAGAGAGCATGTGCGACTTTACTGAAGCAGAAAATATGCAGAAGAACCTTGAATCATCCTCAGCTGATGATGACTCTACGGAAACCAAGACTGAGTCGAAGATCACTCCTGAATTGAAGGAAGAAACAATTCCCAGGGAGGCTAAAGAAGAAAACAGTGCAAGACAAGCCCATATGATTTCTGCTGATAAAGTCGAGGAAAAATGTACTATAGATGATGGAAGTGTTTTGGCCACTGCGGTATCTTTGAATAAGAGAACTGATATGACAAATGAGAAGGAGAATAGTAATTCCGTAGCTTGTACTCCAAAACCACCCATGAATTATTCCAAGAAGGGAGATCTTCTGAGTGATTCCAAAAAGCACCAGACAGCTAAAAAGATATCAAGTATGGTTAGAAACCCGTCAGGGCTAAGGGGAAAAAGTCACTTGCACTCTTCACAAACTAAGAATGTCAAACCGTATACTATGAAAAGAGAAGAAAATGTGAAAAATATAACTGGCACACCCATGTTAGCTCAGGAGAATCAGGCAATTAAGCGGCAGAAGTTGGATGGAGGGAGATCTAGACAGATTCTTAATCCCAAACCCCAAACATTGCCCCACAAGTCAAAATTGGGTTATACCAGTGGCATGCATTCTTCAACTGCTGTTAAAACTCAAAAAGAGGACAGAAAGATGTATGTTCGGGAACCAGCAGCACCCTTTGTTTCAATGGCAGAAATGATGAACAGGTTTCAATCAAGTACCAGAGACTTGTCACTGCCACACAGTTCTCTTTCACATATGAAGCCCAAACTCACCTTAACAAGGCCGAAGGAGCCTGAATTTGAAACATCCCAGCGTGTCCGCTCAGTAAGAGTAAAGAGTACTGCCGAGCTTGAAGAAGAGATGATGGCCAAAATTCCAAAGTTTAAGGCTCGACCTGTAAACAAAAAGATTCTTGAAGCGCCATCATTACCTACAAAGCCAAGAAGTACACCACAGCCACCTGAGTTTCAGGAATTCCATTTAGAGACTATGGCAAGGGCCAATCAAAATGCAGAAACATCCTCAGTAGCTTCAACTGATGTATCACGACAGAACAAACAATCGAAGCCCCATCATCTTACTGAACCGAAAACTCCAACGTTACATACATTATTGAGGGCCCGTCCACCCAGGGTGAAAACTTCATTGGAAATTGAGCAGGAAGAACTTGAAAAGATCCCAAAATTCAAAGCGAAGCCTCTGAATAAGAAGATATTTGAAAGTAAAGGAGATCTCGGGATGTTCTGTAATGCCAAGAAACAAGTGACTAAACCTCAGGAATTTCACTTTGCAACAAATGAAAGAATACCACCACCACCACCTTCAGCCATTCATGATCTATTTGATAAGTTGTCTTTGAACTCAGAGCCCCACCAGAATCCAATTCCAAGAAACACAATGCCAAATCCATTCCATCTCCATACAGAGGAAAGAGGAGCTGAGAAAGAAAGGAAATTTTTTACTGAAGTTATGCAGAAGCAATTGGAAGAAGAAAGAGCTAGGGTTCCCAAAGCTAATCCATATCCTTATACCACTGATTACCCTGTGATCCCACCAAAGCCAGAGCCCAAGGAATGCACAAAAACAGAACCTTTCCAACTAGAGAGCTTAGCGAGGCATGAGGAGGAAATGCAAAGGGAAATGGAAGAAAGACGGAGGATAGAGATGGAAGAAGCTCAGATGAGGGTTTTCAAGGCACAACCAATCTTGAAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0007346 GO:0008017 GO:0008092 GO:0008150 GO:0009507 GO:0009524 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010564 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022607 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032886 GO:0033043 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0050789 GO:0050794 GO:0051128 GO:0051225 GO:0051493 GO:0051726 GO:0060236 GO:0065007 GO:0070013 GO:0070507 GO:0070925 GO:0071840 GO:0090224 GO:0090307 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPX2 TPX2_importin

Protein Analysis

652

Amino Acids

74.53

Weight (kDa)

8.91

Isoelectric Point (pI)

57.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPX2_importin	PF12214	338 - 434	4.2e-32	Cell cycle regulated microtubule associated protein
TPX2_importin	PF12214	439 - 516	5.6e-18	Cell cycle regulated microtubule associated protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03780 AT1G03780 AT1G03780
fragaria_vesca	FvH4_2g11956 FvH4_5g28370 FvH4_5g28401 FvH4_5g28402 FvH4_5g28440 FvH4_5g28450 FvH4_5g28450 FvH4_5g28471 FvH4_5g28480 FvH4_5g28561 FvH4_6g25610 FvH4_6g25610 FvH4_6g25690 FvH4_6g25731 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_c15g00040 FvH4_c17g00020 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090
malus_domestica	MD09G1243900.v1.1 MD17G1235800.v1.1
prunus_persica	Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1
pyrus_communis	pycom17g23880
rosa_chinensis	RchiOBHm_Chr2g0127601
rosa_laevigata	RLG00000018552 RLG00000018951
rosa_multiflora	Rmu_ssc0000200.1_g000020
rosa_roxburghii	Rroxscaffold_2G00116560 Rroxscaffold_2G00123480
rosa_rugosa	Rorug02G0272600
rosa_samantha	Rh2AG324600 Rh2BG333900 Rh2CG312100 Rh2DG352100
rosa_wichuraiana	Rw2G026360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1062
AccI	GTMKAC	1 cut(s)	674
AccII	CGCG	1 cut(s)	82
AciI	CCGC	6 cut(s)	5, 80, 150, 449, 751, 1060
AclI	AACGTT	1 cut(s)	1340
AclWI	GGATC	3 cut(s)	195, 1411, 1783
AcoI	YGGCCR	2 cut(s)	441, 1107
AcsI	RAATTY	6 cut(s)	1037, 1113, 1214, 1424, 1520, 1694
AcuI	CTGAAG	3 cut(s)	255, 1548, 1725
AcyI	GRCGYC	1 cut(s)	35
AfaI	GTAC	5 cut(s)	418, 514, 958, 1081, 1189
AfiI	CCNNNNNNNGG	3 cut(s)	138, 1020, 1666
AjnI	CCWGG	2 cut(s)	344, 1370
AjuI	GAANNNNNNNTTGG	2 cut(s)	1370, 1402
Alw21I	GWGCWC	1 cut(s)	138
Alw26I	GTCTC	3 cut(s)	101, 957, 1220
AlwI	GGATC	3 cut(s)	195, 1411, 1783
Ama87I	CYCGRG	1 cut(s)	1475
AoxI	GGCC	7 cut(s)	75, 129, 441, 1022, 1107, 1239, 1359
ApaI	GGGCCC	1 cut(s)	1363
ApeKI	GCWGC	1 cut(s)	908
ApoI	RAATTY	6 cut(s)	1037, 1113, 1214, 1424, 1520, 1694
Asp700I	GAANNNNTTC	1 cut(s)	339
AspLEI	GCGC	2 cut(s)	84, 1162
AspS9I	GGNCC	4 cut(s)	76, 1239, 1359, 1360
AsuHPI	GGTGA	2 cut(s)	1003, 1387
AvaI	CYCGRG	1 cut(s)	1475
AxyI	CCTNAGG	1 cut(s)	1515
BaeGI	GKGCMC	1 cut(s)	1363
BaeI	ACNNNNGTAYC	4 cut(s)	435, 468, 1266, 1299
BalI	TGGCCA	2 cut(s)	443, 1109
BanII	GRGCYC	4 cut(s)	138, 1363, 1611, 1809
Bbv12I	GWGCWC	1 cut(s)	138
BbvCI	CCTCAGC	1 cut(s)	271
BbvI	GCAGC	1 cut(s)	920
BccI	CCATC	7 cut(s)	422, 758, 1099, 1171, 1320, 1662, 1900
BceAI	ACGGC	1 cut(s)	48
BciT130I	CCWGG	2 cut(s)	346, 1372
BcoDI	GTCTC	3 cut(s)	101, 957, 1220
BfaI	CTAG	4 cut(s)	183, 777, 1740, 1841
BfmI	CTRYAG	1 cut(s)	420
BfoI	RGCGCY	1 cut(s)	1163
BglII	AGATCT	3 cut(s)	550, 773, 1471
BisI	GCNGC	3 cut(s)	5, 752, 909
BlpI	GCTNAGC	1 cut(s)	1849
BlsI	GCNGC	3 cut(s)	6, 753, 910
BmcAI	AGTACT	1 cut(s)	1081
Bme1390I	CCNGG	2 cut(s)	346, 1372
BmeT110I	CYCGRG	1 cut(s)	1475
BmgT120I	GGNCC	4 cut(s)	76, 1239, 1359, 1360
BmiI	GGNNCC	6 cut(s)	21, 78, 903, 1032, 1361, 1746
BmrFI	CCNGG	2 cut(s)	346, 1372
Bpu10I	CCTNAGC	3 cut(s)	271, 623, 729
Bpu1102I	GCTNAGC	1 cut(s)	1849
BsaBI	GATNNNNATC	1 cut(s)	50
BsaHI	GRCGYC	1 cut(s)	35
BsaI	GGTCTC	1 cut(s)	101
BsaJI	CCNNGG	5 cut(s)	344, 345, 1370, 1371, 1809
Bsc4I	CCNNNNNNNGG	3 cut(s)	138, 1020, 1666
Bse118I	RCCGGY	1 cut(s)	7
Bse1I	ACTGG	3 cut(s)	199, 715, 837
Bse21I	CCTNAGG	1 cut(s)	1515
Bse3DI	GCAATG	1 cut(s)	806
Bse8I	GATNNNNATC	1 cut(s)	50
BseBI	CCWGG	2 cut(s)	346, 1372
BseDI	CCNNGG	5 cut(s)	344, 345, 1370, 1371, 1809
BseGI	GGATG	5 cut(s)	266, 769, 1046, 1259, 1485
BseJI	GATNNNNATC	1 cut(s)	50
BseLI	CCNNNNNNNGG	3 cut(s)	138, 1020, 1666
BseMI	GCAATG	1 cut(s)	806
BseNI	ACTGG	3 cut(s)	199, 715, 837
BseRI	GAGGAG	2 cut(s)	1689, 1877
BseSI	GKGCMC	1 cut(s)	1363
BseXI	GCAGC	1 cut(s)	920
BseYI	CCCAGC	1 cut(s)	1050
Bsh1236I	CGCG	1 cut(s)	82
BshFI	GGCC	7 cut(s)	77, 131, 443, 1024, 1109, 1241, 1361
BsiHKAI	GWGCWC	1 cut(s)	138
BsiHKCI	CYCGRG	1 cut(s)	1475
BsiSI	CCGG	1 cut(s)	8
BslI	CCNNNNNNNGG	3 cut(s)	138, 1020, 1666
BsmAI	GTCTC	3 cut(s)	101, 957, 1220
BsmI	GAATGC	2 cut(s)	847, 1820
BsnI	GGCC	7 cut(s)	77, 131, 443, 1024, 1109, 1241, 1361
Bso31I	GGTCTC	1 cut(s)	101
BsoBI	CYCGRG	1 cut(s)	1475
Bsp120I	GGGCCC	1 cut(s)	1359
Bsp1286I	GDGCHC	4 cut(s)	138, 1363, 1611, 1809
Bsp1720I	GCTNAGC	1 cut(s)	1849
BspACI	CCGC	6 cut(s)	5, 80, 150, 449, 751, 1060
BspANI	GGCC	7 cut(s)	77, 131, 443, 1024, 1109, 1241, 1361
BspFNI	CGCG	1 cut(s)	82
BspHI	TCATGA	1 cut(s)	1573
BspLI	GGNNCC	6 cut(s)	21, 78, 903, 1032, 1361, 1746
BspPI	GGATC	3 cut(s)	195, 1411, 1783
BspTNI	GGTCTC	1 cut(s)	101
BsrBI	CCGCTC	1 cut(s)	1062
BsrDI	GCAATG	1 cut(s)	806
BsrFI	RCCGGY	1 cut(s)	7
BsrI	ACTGG	3 cut(s)	199, 715, 837
BssAI	RCCGGY	1 cut(s)	7
BssECI	CCNNGG	5 cut(s)	344, 345, 1370, 1371, 1809
BssNAI	GTATAC	1 cut(s)	675
BssNI	GRCGYC	1 cut(s)	35
BssT1I	CCWWGG	1 cut(s)	1809
Bst1107I	GTATAC	1 cut(s)	675
Bst2UI	CCWGG	2 cut(s)	346, 1372
Bst4CI	ACNGT	4 cut(s)	211, 368, 672, 983
Bst6I	CTCTTC	2 cut(s)	652, 1092
BstACI	GRCGYC	1 cut(s)	35
BstC8I	GCNNGC	2 cut(s)	9, 845
BstENI	CCTNNNNNAGG	1 cut(s)	1018
BstF5I	GGATG	5 cut(s)	266, 769, 1046, 1259, 1485
BstFNI	CGCG	1 cut(s)	82
BstH2I	RGCGCY	1 cut(s)	1163
BstHHI	GCGC	2 cut(s)	84, 1162
BstMAI	GTCTC	3 cut(s)	101, 957, 1220
BstMWI	GCNNNNNNNGC	2 cut(s)	377, 1030
BstNI	CCWGG	2 cut(s)	346, 1372
BstNSI	RCATGY	2 cut(s)	223, 847
BstSCI	CCNGG	2 cut(s)	344, 1370
BstSFI	CTRYAG	1 cut(s)	420
BstSLI	GKGCMC	1 cut(s)	1363
BstUI	CGCG	1 cut(s)	82
BstV1I	GCAGC	1 cut(s)	920
BstX2I	RGATCY	5 cut(s)	200, 550, 773, 1416, 1471
BstYI	RGATCY	5 cut(s)	200, 550, 773, 1416, 1471
BstZ17I	GTATAC	1 cut(s)	675
Bsu36I	CCTNAGG	1 cut(s)	1515
BsuRI	GGCC	7 cut(s)	77, 131, 443, 1024, 1109, 1241, 1361
BtsCI	GGATG	5 cut(s)	266, 769, 1046, 1259, 1485
BtsI	GCAGTG	2 cut(s)	444, 971
BtsIMutI	CAGTG	5 cut(s)	373, 444, 844, 971, 1773
Cac8I	GCNNGC	2 cut(s)	9, 845
CciI	TCATGA	1 cut(s)	1573
CfoI	GCGC	2 cut(s)	84, 1162
Cfr10I	RCCGGY	1 cut(s)	7
Cfr13I	GGNCC	4 cut(s)	76, 1239, 1359, 1360
CseI	GACGC	1 cut(s)	24
Csp6I	GTAC	5 cut(s)	417, 513, 957, 1080, 1188
CviAII	CATG	7 cut(s)	178, 220, 529, 721, 844, 1574, 1859
CviQI	GTAC	5 cut(s)	417, 513, 957, 1080, 1188
EaeI	YGGCCR	2 cut(s)	441, 1107
Eam1104I	CTCTTC	2 cut(s)	652, 1092
EarI	CTCTTC	2 cut(s)	652, 1092
EciI	GGCGGA	1 cut(s)	139
Ecl136II	GAGCTC	1 cut(s)	136
Eco130I	CCWWGG	1 cut(s)	1809
Eco24I	GRGCYC	4 cut(s)	138, 1363, 1611, 1809
Eco31I	GGTCTC	1 cut(s)	101
Eco32I	GATATC	1 cut(s)	594
Eco53kI	GAGCTC	1 cut(s)	136
Eco57I	CTGAAG	3 cut(s)	255, 1548, 1725
Eco81I	CCTNAGG	1 cut(s)	1515
Eco88I	CYCGRG	1 cut(s)	1475
EcoICRI	GAGCTC	1 cut(s)	136
EcoNI	CCTNNNNNAGG	1 cut(s)	1018
EcoO109I	RGGNCCY	1 cut(s)	1359
EcoRI	GAATTC	1 cut(s)	1214
EcoRII	CCWGG	2 cut(s)	344, 1370
EcoRV	GATATC	1 cut(s)	594
EcoT14I	CCWWGG	1 cut(s)	1809
EcoT22I	ATGCAT	1 cut(s)	849
EcoT38I	GRGCYC	4 cut(s)	138, 1363, 1611, 1809
ErhI	CCWWGG	1 cut(s)	1809
FaeI	CATG	7 cut(s)	181, 223, 532, 724, 847, 1577, 1862
FatI	CATG	7 cut(s)	177, 219, 528, 720, 843, 1573, 1858
FauI	CCCGC	1 cut(s)	87
FauNDI	CATATG	2 cut(s)	384, 996
FblI	GTMKAC	1 cut(s)	674
Fnu4HI	GCNGC	3 cut(s)	5, 752, 909
FokI	GGATG	5 cut(s)	253, 776, 1033, 1246, 1492
FriOI	GRGCYC	4 cut(s)	138, 1363, 1611, 1809
Fsp4HI	GCNGC	3 cut(s)	5, 752, 909
FspBI	CTAG	4 cut(s)	183, 777, 1740, 1841
GlaI	GCGC	2 cut(s)	83, 1161
GluI	GCNGC	3 cut(s)	5, 752, 909
GsaI	CCCAGC	1 cut(s)	1054
HaeII	RGCGCY	1 cut(s)	1163
HaeIII	GGCC	7 cut(s)	77, 131, 443, 1024, 1109, 1241, 1361
HapII	CCGG	1 cut(s)	8
HgaI	GACGC	1 cut(s)	24
HhaI	GCGC	2 cut(s)	84, 1162
Hin1I	GRCGYC	1 cut(s)	35
Hin1II	CATG	7 cut(s)	181, 223, 532, 724, 847, 1577, 1862
Hin6I	GCGC	2 cut(s)	82, 1160
HinP1I	GCGC	2 cut(s)	82, 1160
HpaII	CCGG	1 cut(s)	8
HphI	GGTGA	2 cut(s)	1003, 1387
Hpy166II	GTNNAC	4 cut(s)	675, 1141, 1190, 1367
Hpy188I	TCNGA	4 cut(s)	558, 1443, 1606, 1920
Hpy8I	GTNNAC	4 cut(s)	675, 1141, 1190, 1367
Hpy99I	CGWCG	6 cut(s)	16, 34, 46, 59, 116, 119
HpyAV	CCTTC	7 cut(s)	177, 184, 322, 481, 538, 1021, 1572
HpyCH4III	ACNGT	4 cut(s)	211, 368, 672, 983
HpyCH4IV	ACGT	1 cut(s)	1340
HpyCH4V	TGCA	9 cut(s)	250, 371, 643, 847, 1253, 1532, 1714, 1818, 1873
HpyF10VI	GCNNNNNNNGC	2 cut(s)	377, 1030
HpySE526I	ACGT	1 cut(s)	1340
Hsp92I	GRCGYC	1 cut(s)	35
Hsp92II	CATG	7 cut(s)	181, 223, 532, 724, 847, 1577, 1862
HspAI	GCGC	2 cut(s)	82, 1160
KroI	GCCGGC	1 cut(s)	7
KroNI	GCCGGC	1 cut(s)	9
LmnI	GCTCC	2 cut(s)	1030, 1676
Lsp1109I	GCAGC	1 cut(s)	920
MaeI	CTAG	4 cut(s)	183, 777, 1740, 1841
MaeII	ACGT	1 cut(s)	1340
MaeIII	GTNAC	4 cut(s)	635, 969, 1341, 1504
MbiI	CCGCTC	1 cut(s)	1062
MfeI	CAATTG	1 cut(s)	1721
MflI	RGATCY	5 cut(s)	200, 550, 773, 1416, 1471
MhlI	GDGCHC	4 cut(s)	138, 1363, 1611, 1809
MlsI	TGGCCA	2 cut(s)	443, 1109
MluNI	TGGCCA	2 cut(s)	443, 1109
MlyI	GAGTC	3 cut(s)	140, 278, 314
MmeI	TCCRAC	3 cut(s)	741, 1361, 1861
Mox20I	TGGCCA	2 cut(s)	443, 1109
Mph1103I	ATGCAT	1 cut(s)	849
MreI	CGCCGGCG	1 cut(s)	7
MroNI	GCCGGC	1 cut(s)	7
MroXI	GAANNNNTTC	1 cut(s)	339
MscI	TGGCCA	2 cut(s)	443, 1109
MseI	TTAA	5 cut(s)	747, 789, 864, 1016, 1125
MslI	CAYNNNNRTG	1 cut(s)	719
Msp20I	TGGCCA	2 cut(s)	443, 1109
MspA1I	CMGCKG	1 cut(s)	275
MspI	CCGG	1 cut(s)	8
MspR9I	CCNGG	2 cut(s)	346, 1372
MunI	CAATTG	1 cut(s)	1721
Mva1269I	GAATGC	2 cut(s)	847, 1820
MvaI	CCWGG	2 cut(s)	346, 1372
MvnI	CGCG	1 cut(s)	82
MwoI	GCNNNNNNNGC	2 cut(s)	377, 1030
NaeI	GCCGGC	1 cut(s)	9
NdeI	CATATG	2 cut(s)	384, 996
NgoMIV	GCCGGC	1 cut(s)	7
NlaIII	CATG	7 cut(s)	181, 223, 532, 724, 847, 1577, 1862
NlaIV	GGNNCC	6 cut(s)	21, 78, 903, 1032, 1361, 1746
NmeAIII	GCCGAG	3 cut(s)	53, 157, 1111
NmuCI	GTSAC	3 cut(s)	635, 969, 1504
NsiI	ATGCAT	1 cut(s)	849
NspI	RCATGY	2 cut(s)	223, 847
PaeI	GCATGC	1 cut(s)	847
PagI	TCATGA	1 cut(s)	1573
PasI	CCCWGGG	2 cut(s)	345, 1371
PcsI	WCGNNNNNNNCGW	2 cut(s)	38, 111
PctI	GAATGC	2 cut(s)	847, 1820
PdiI	GCCGGC	1 cut(s)	9
PdmI	GAANNNNTTC	1 cut(s)	339
PfeI	GAWTC	7 cut(s)	186, 263, 563, 736, 784, 1150, 1618
PflFI	GACNNNGTC	2 cut(s)	34, 304
PkrI	GCNGC	3 cut(s)	6, 753, 910
PleI	GAGTC	3 cut(s)	140, 278, 313
PpsI	GAGTC	3 cut(s)	140, 278, 313
Psp124BI	GAGCTC	1 cut(s)	138
Psp1406I	AACGTT	1 cut(s)	1340
Psp6I	CCWGG	2 cut(s)	344, 1370
PspFI	CCCAGC	1 cut(s)	1050
PspGI	CCWGG	2 cut(s)	344, 1370
PspN4I	GGNNCC	6 cut(s)	21, 78, 903, 1032, 1361, 1746
PspOMI	GGGCCC	1 cut(s)	1359
PspPI	GGNCC	4 cut(s)	76, 1239, 1359, 1360
PsuI	RGATCY	5 cut(s)	200, 550, 773, 1416, 1471
PsyI	GACNNNGTC	2 cut(s)	34, 304
PvuII	CAGCTG	1 cut(s)	275
RsaI	GTAC	5 cut(s)	418, 514, 958, 1081, 1189
RsaNI	GTAC	5 cut(s)	417, 513, 957, 1080, 1188
RseI	CAYNNNNRTG	1 cut(s)	719
SacI	GAGCTC	1 cut(s)	138
SaqAI	TTAA	5 cut(s)	747, 789, 864, 1016, 1125
SatI	GCNGC	3 cut(s)	5, 752, 909
Sau96I	GGNCC	4 cut(s)	76, 1239, 1359, 1360
ScaI	AGTACT	1 cut(s)	1081
SchI	GAGTC	3 cut(s)	140, 278, 314
ScrFI	CCNGG	2 cut(s)	346, 1372
SduI	GDGCHC	4 cut(s)	138, 1363, 1611, 1809
SfcI	CTRYAG	1 cut(s)	420
SgrAI	CRCCGGYG	1 cut(s)	7
SmiMI	CAYNNNNRTG	1 cut(s)	719
SphI	GCATGC	1 cut(s)	847
SsiI	CCGC	6 cut(s)	5, 80, 150, 449, 751, 1060
SspMI	CTAG	4 cut(s)	183, 777, 1740, 1841
SstI	GAGCTC	1 cut(s)	138
StyD4I	CCNGG	2 cut(s)	344, 1370
StyI	CCWWGG	1 cut(s)	1809
TaaI	ACNGT	4 cut(s)	211, 368, 672, 983
TaiI	ACGT	1 cut(s)	1343
TaqI	TCGA	8 cut(s)	41, 54, 90, 144, 308, 405, 1132, 1304
TaqII	GACCGA	1 cut(s)	125
TatI	WGTACW	4 cut(s)	416, 512, 1079, 1187
TauI	GCSGC	2 cut(s)	7, 754
TfiI	GAWTC	7 cut(s)	186, 263, 563, 736, 784, 1150, 1618
Tru1I	TTAA	5 cut(s)	747, 789, 864, 1016, 1125
Tru9I	TTAA	5 cut(s)	747, 789, 864, 1016, 1125
TscAI	CASTG	5 cut(s)	373, 451, 844, 978, 1780
TseFI	GTSAC	3 cut(s)	635, 969, 1504
TseI	GCWGC	1 cut(s)	908
Tsp45I	GTSAC	3 cut(s)	635, 969, 1504
TspDTI	ATGAA	9 cut(s)	85, 166, 545, 695, 953, 1013, 1374, 1554, 1562
TspGWI	ACGGA	4 cut(s)	29, 305, 493, 1909
TspRI	CASTG	5 cut(s)	373, 451, 844, 978, 1780
Tth111I	GACNNNGTC	2 cut(s)	34, 304
XagI	CCTNNNNNAGG	1 cut(s)	1018
XapI	RAATTY	6 cut(s)	1037, 1113, 1214, 1424, 1520, 1694
XbaI	TCTAGA	1 cut(s)	776
XceI	RCATGY	2 cut(s)	223, 847
XmiI	GTMKAC	1 cut(s)	674
XmnI	GAANNNNTTC	1 cut(s)	339
XspI	CTAG	4 cut(s)	183, 777, 1740, 1841
ZrmI	AGTACT	1 cut(s)	1081
Zsp2I	ATGCAT	1 cut(s)	849

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.