Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0000750

Physical Location & Seq

Genomic Coordinates Reverse (-)

39422391 .. 39427582

Gene Structure 5192 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG312100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGCCGCCGGCGACGGAGGAACCTAACACGACGGCGTCCTCGATGATCGACGAGATTTATGAGTTCTCGGCCCCGCGCTTCTTCGATTTCATCAAGGACGAGACCGACGATGACAAGATCAAGGCCGAGCTCTGGTTCGACTCCGCCACAGCCTACGCCCCTTCCCCCTTCATGCCTAGAATCAAGACTGGTAGATCCTTTACAGTAGAGAGCATGTGCGACTTTACTGAAGCAGAACATATGCAGAAGAACCTTGAATCATCCTCAGCTGATGATGACTCTACGGAAACCAAGACTGAGTCGAAGATCACTCCTGAATTGAAGGAAGAAACAATTCCCAGGGAGGCTAAAGAAGAAAACAGTGCAAGACAAGCCAATATGATTTCTGCTGATAAAGTCGAGGACAAATGTACTATAGATGATGGAAGTGTTTTGGCCACTGCGGTATCTTTGAATAAGAGAACTGATATGACAAATGAGAAGGAGAATAGTAATTCCGTAGCTTGTACTCCAAAACCACCCATGAATTATTCCAAGAAGGGAGATCTTCTGAGTGATTCCAAAAAGCACCAGACAGCTAAAAAGATATCAAGTATGGTTAGAAACCCATCAGGGCTAAGGGGAAAAAGTCACTTGCACTCTTCACAAACTAAGAATGTCAAACCATATACTATGAAAAGAGAAGAAAATGTGAAAAATATAACTGGCACACCCATGTTAGCTCAGGAGAATCAGGCAATTAAGCGGCAGAAGTTGGATGGAGGGAGATCTAGACAGATTCTTAATCCCAAACCCCAAACATTGCCCCACAAGTCAAAATTGGGTTATACCAGTGGCATGCATTCTTCAACTGCTGTTAAAACTCAAAAAGAGGACAGAAAGATGTATGTTCGGGAACCAGCAGCACCCTTTGTTTCAATGGCAGAAATGATGAACAGGTTCCAATCAAGTACCAGAGACTTGTCACTGCCACACAGTTCTCTTTCACATATGAAGCCCAAACTCACCTTAACAAGGCCGAAGGAGCCTGAATTTGAAACATCCCAGCGTGTCCGCTCAGTAAGAGTAAAGAGTACTGCCGAGCTTGAAGAAGAGATGATGGCCAAAATTCCAAAGTTTAAGGCTCGACCTGTAAACAAAAAGATTCTTGAAGCGCCATCATTACCTGCAAAGCCAAGAAGTACACCACAGCCACCTGAGTTTCAGGAATTCCATTTAGAGACTATGGCAAGGGCCAATCAAAATGCAGAAACATCCTCAGTAGCTTCAACTGATGTATCACGACAGAACAAACAATCGAAGCCCCATCATCTTACTGAACCGAAAACTCCAACGTTACATACATTATTGAGGGCCCGTCCACCCAGGGTGAAAACTTCATTGGAAATTGAGCAGGAAGAACTTGAAAAGATCCCAAAATTCAAAGCGAAGCCTCTGAATAAGAAGATATTTGAAAGTAAAGGAGATCTCGGGATGTTCTGTAATGCCAAGAAACAAGTGACTAAACCTCAGGAATTTCACTTTGCAACAAATGAAAGAATACCACCACCACCACCTTCAGCCATTCATGATCTATTTGATAAGTTGTCTTTGAACTCAGAGCCCCACCAGAATCCAATTCCAAGAAACACAATGCCAAATCCTTTCCATCTCCATACAGAGGAAAGAGGAGCTGAGAAAGAAAGGAAATTTTTTACTGAAGTTATGCAGAAGCAATTGGAAGAAGAAAGAGCTAGGGTTCCCAAAGCTAATCCATATCCTTATACCACTGATTACCCTGTGGTACATATCTTTATTTATTTCTGTCTCATTTTAAAGACTAGCAATTGCAATGGAGATGGTACTATGATTCTTTTGTTAAATGCAGATCCCACCAAAGCCAGAGCCCAAGGAATGCACAAAACCGGAACCTTTCCAACTAGAGAGCTTAGCGAGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0007346 GO:0008017 GO:0008092 GO:0008150 GO:0009507 GO:0009524 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010564 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022607 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032886 GO:0033043 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0050789 GO:0050794 GO:0051128 GO:0051225 GO:0051493 GO:0051726 GO:0060236 GO:0065007 GO:0070013 GO:0070507 GO:0070925 GO:0071840 GO:0090224 GO:0090307 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPX2 TPX2_importin

Protein Analysis

646

Amino Acids

73.15

Weight (kDa)

9.11

Isoelectric Point (pI)

52.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPX2_importin	PF12214	336 - 432	3.9e-32	Cell cycle regulated microtubule associated protein
TPX2_importin	PF12214	437 - 514	5.5e-18	Cell cycle regulated microtubule associated protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03780 AT1G03780 AT1G03780
fragaria_vesca	FvH4_2g11956 FvH4_5g28370 FvH4_5g28401 FvH4_5g28402 FvH4_5g28440 FvH4_5g28450 FvH4_5g28450 FvH4_5g28471 FvH4_5g28480 FvH4_5g28561 FvH4_6g25610 FvH4_6g25610 FvH4_6g25690 FvH4_6g25731 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_c15g00040 FvH4_c17g00020 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090
malus_domestica	MD09G1243900.v1.1 MD17G1235800.v1.1
prunus_persica	Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1
pyrus_communis	pycom17g23880
rosa_chinensis	RchiOBHm_Chr2g0127601
rosa_laevigata	RLG00000018552 RLG00000018951
rosa_multiflora	Rmu_ssc0000200.1_g000020
rosa_roxburghii	Rroxscaffold_2G00116560 Rroxscaffold_2G00123480
rosa_rugosa	Rorug02G0272600
rosa_samantha	Rh2AG324600 Rh2BG333900 Rh2CG312100 Rh2DG352100
rosa_wichuraiana	Rw2G026360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1174
AccBSI	CCGCTC	1 cut(s)	1056
AccII	CGCG	1 cut(s)	76
AciI	CCGC	6 cut(s)	5, 74, 144, 443, 745, 1054
AclI	AACGTT	1 cut(s)	1334
AclWI	GGATC	3 cut(s)	189, 1405, 1862
AcoI	YGGCCR	2 cut(s)	435, 1101
AcsI	RAATTY	6 cut(s)	1031, 1107, 1208, 1418, 1514, 1688
AcuI	CTGAAG	3 cut(s)	249, 1542, 1719
AcyI	GRCGYC	1 cut(s)	35
AfaI	GTAC	7 cut(s)	412, 508, 952, 1075, 1183, 1785, 1843
AfiI	CCNNNNNNNGG	3 cut(s)	132, 1014, 1660
AjnI	CCWGG	2 cut(s)	338, 1364
AjuI	GAANNNNNNNTTGG	2 cut(s)	1364, 1396
Alw21I	GWGCWC	1 cut(s)	132
Alw26I	GTCTC	4 cut(s)	95, 951, 1214, 1811
AlwI	GGATC	3 cut(s)	189, 1405, 1862
Ama87I	CYCGRG	1 cut(s)	1469
AoxI	GGCC	7 cut(s)	69, 123, 435, 1016, 1101, 1233, 1353
ApaI	GGGCCC	1 cut(s)	1357
ApeKI	GCWGC	1 cut(s)	902
ApoI	RAATTY	6 cut(s)	1031, 1107, 1208, 1418, 1514, 1688
Asp700I	GAANNNNTTC	2 cut(s)	333, 938
AspLEI	GCGC	2 cut(s)	78, 1156
AspS9I	GGNCC	4 cut(s)	70, 1233, 1353, 1354
AsuHPI	GGTGA	2 cut(s)	997, 1381
AvaI	CYCGRG	1 cut(s)	1469
AxyI	CCTNAGG	1 cut(s)	1509
BaeGI	GKGCMC	1 cut(s)	1357
BaeI	ACNNNNGTAYC	4 cut(s)	429, 462, 1260, 1293
BalI	TGGCCA	2 cut(s)	437, 1103
BanII	GRGCYC	4 cut(s)	132, 1357, 1605, 1888
Bbv12I	GWGCWC	1 cut(s)	132
BbvCI	CCTCAGC	1 cut(s)	265
BbvI	GCAGC	1 cut(s)	914
BccI	CCATC	8 cut(s)	416, 616, 752, 1093, 1165, 1314, 1656, 1832
BceAI	ACGGC	1 cut(s)	48
BciT130I	CCWGG	2 cut(s)	340, 1366
BcoDI	GTCTC	4 cut(s)	95, 951, 1214, 1811
BfaI	CTAG	5 cut(s)	177, 771, 1734, 1821, 1920
BfmI	CTRYAG	1 cut(s)	414
BfoI	RGCGCY	1 cut(s)	1157
BfuAI	ACCTGC	1 cut(s)	1174
BglII	AGATCT	3 cut(s)	544, 767, 1465
BisI	GCNGC	3 cut(s)	5, 746, 903
BlpI	GCTNAGC	1 cut(s)	1928
BlsI	GCNGC	3 cut(s)	6, 747, 904
BmcAI	AGTACT	1 cut(s)	1075
Bme1390I	CCNGG	2 cut(s)	340, 1366
BmeT110I	CYCGRG	1 cut(s)	1469
BmgT120I	GGNCC	4 cut(s)	70, 1233, 1353, 1354
BmiI	GGNNCC	8 cut(s)	21, 72, 897, 941, 1026, 1355, 1740, 1909
BmrFI	CCNGG	2 cut(s)	340, 1366
Bpu10I	CCTNAGC	3 cut(s)	265, 617, 723
Bpu1102I	GCTNAGC	1 cut(s)	1928
BsaHI	GRCGYC	1 cut(s)	35
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	5 cut(s)	338, 339, 1364, 1365, 1888
BsaWI	WCCGGW	1 cut(s)	1904
Bsc4I	CCNNNNNNNGG	3 cut(s)	132, 1014, 1660
Bse118I	RCCGGY	1 cut(s)	7
Bse1I	ACTGG	3 cut(s)	193, 709, 831
Bse21I	CCTNAGG	1 cut(s)	1509
Bse3DI	GCAATG	2 cut(s)	800, 1837
BseBI	CCWGG	2 cut(s)	340, 1366
BseDI	CCNNGG	5 cut(s)	338, 339, 1364, 1365, 1888
BseGI	GGATG	5 cut(s)	260, 763, 1040, 1253, 1479
BseLI	CCNNNNNNNGG	3 cut(s)	132, 1014, 1660
BseMI	GCAATG	2 cut(s)	800, 1837
BseNI	ACTGG	3 cut(s)	193, 709, 831
BseRI	GAGGAG	1 cut(s)	1683
BseSI	GKGCMC	1 cut(s)	1357
BseXI	GCAGC	1 cut(s)	914
BseYI	CCCAGC	1 cut(s)	1044
Bsh1236I	CGCG	1 cut(s)	76
BshFI	GGCC	7 cut(s)	71, 125, 437, 1018, 1103, 1235, 1355
BsiHKAI	GWGCWC	1 cut(s)	132
BsiHKCI	CYCGRG	1 cut(s)	1469
BsiSI	CCGG	2 cut(s)	8, 1905
BslI	CCNNNNNNNGG	3 cut(s)	132, 1014, 1660
BsmAI	GTCTC	4 cut(s)	95, 951, 1214, 1811
BsmI	GAATGC	2 cut(s)	841, 1899
BsnI	GGCC	7 cut(s)	71, 125, 437, 1018, 1103, 1235, 1355
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	1 cut(s)	1469
Bsp120I	GGGCCC	1 cut(s)	1353
Bsp1286I	GDGCHC	4 cut(s)	132, 1357, 1605, 1888
Bsp1720I	GCTNAGC	1 cut(s)	1928
BspACI	CCGC	6 cut(s)	5, 74, 144, 443, 745, 1054
BspANI	GGCC	7 cut(s)	71, 125, 437, 1018, 1103, 1235, 1355
BspFNI	CGCG	1 cut(s)	76
BspHI	TCATGA	1 cut(s)	1567
BspLI	GGNNCC	8 cut(s)	21, 72, 897, 941, 1026, 1355, 1740, 1909
BspMI	ACCTGC	1 cut(s)	1174
BspPI	GGATC	3 cut(s)	189, 1405, 1862
BspTNI	GGTCTC	1 cut(s)	95
BsrBI	CCGCTC	1 cut(s)	1056
BsrDI	GCAATG	2 cut(s)	800, 1837
BsrFI	RCCGGY	1 cut(s)	7
BsrI	ACTGG	3 cut(s)	193, 709, 831
BssAI	RCCGGY	1 cut(s)	7
BssECI	CCNNGG	5 cut(s)	338, 339, 1364, 1365, 1888
BssNI	GRCGYC	1 cut(s)	35
BssT1I	CCWWGG	1 cut(s)	1888
Bst2UI	CCWGG	2 cut(s)	340, 1366
Bst4CI	ACNGT	3 cut(s)	205, 362, 977
Bst6I	CTCTTC	2 cut(s)	646, 1086
BstACI	GRCGYC	1 cut(s)	35
BstC8I	GCNNGC	2 cut(s)	9, 839
BstENI	CCTNNNNNAGG	1 cut(s)	1012
BstF5I	GGATG	5 cut(s)	260, 763, 1040, 1253, 1479
BstFNI	CGCG	1 cut(s)	76
BstH2I	RGCGCY	1 cut(s)	1157
BstHHI	GCGC	2 cut(s)	78, 1156
BstMAI	GTCTC	4 cut(s)	95, 951, 1214, 1811
BstMWI	GCNNNNNNNGC	2 cut(s)	371, 1024
BstNI	CCWGG	2 cut(s)	340, 1366
BstNSI	RCATGY	2 cut(s)	217, 841
BstSCI	CCNGG	2 cut(s)	338, 1364
BstSFI	CTRYAG	1 cut(s)	414
BstSLI	GKGCMC	1 cut(s)	1357
BstUI	CGCG	1 cut(s)	76
BstV1I	GCAGC	1 cut(s)	914
BstX2I	RGATCY	6 cut(s)	194, 544, 767, 1410, 1465, 1867
BstYI	RGATCY	6 cut(s)	194, 544, 767, 1410, 1465, 1867
Bsu36I	CCTNAGG	1 cut(s)	1509
BsuRI	GGCC	7 cut(s)	71, 125, 437, 1018, 1103, 1235, 1355
BtsCI	GGATG	5 cut(s)	260, 763, 1040, 1253, 1479
BtsI	GCAGTG	2 cut(s)	438, 965
BtsIMutI	CAGTG	5 cut(s)	367, 438, 838, 965, 1767
BveI	ACCTGC	1 cut(s)	1174
Cac8I	GCNNGC	2 cut(s)	9, 839
CciI	TCATGA	1 cut(s)	1567
CfoI	GCGC	2 cut(s)	78, 1156
Cfr10I	RCCGGY	1 cut(s)	7
Cfr13I	GGNCC	4 cut(s)	70, 1233, 1353, 1354
CseI	GACGC	1 cut(s)	24
Csp6I	GTAC	7 cut(s)	411, 507, 951, 1074, 1182, 1784, 1842
CviAII	CATG	7 cut(s)	172, 214, 523, 715, 838, 1568, 1938
CviQI	GTAC	7 cut(s)	411, 507, 951, 1074, 1182, 1784, 1842
DraI	TTTAAA	1 cut(s)	1815
EaeI	YGGCCR	2 cut(s)	435, 1101
Eam1104I	CTCTTC	2 cut(s)	646, 1086
EarI	CTCTTC	2 cut(s)	646, 1086
EciI	GGCGGA	1 cut(s)	133
Ecl136II	GAGCTC	1 cut(s)	130
Eco130I	CCWWGG	1 cut(s)	1888
Eco24I	GRGCYC	4 cut(s)	132, 1357, 1605, 1888
Eco31I	GGTCTC	1 cut(s)	95
Eco32I	GATATC	1 cut(s)	588
Eco53kI	GAGCTC	1 cut(s)	130
Eco57I	CTGAAG	3 cut(s)	249, 1542, 1719
Eco81I	CCTNAGG	1 cut(s)	1509
Eco88I	CYCGRG	1 cut(s)	1469
EcoICRI	GAGCTC	1 cut(s)	130
EcoNI	CCTNNNNNAGG	1 cut(s)	1012
EcoO109I	RGGNCCY	1 cut(s)	1353
EcoRI	GAATTC	1 cut(s)	1208
EcoRII	CCWGG	2 cut(s)	338, 1364
EcoRV	GATATC	1 cut(s)	588
EcoT14I	CCWWGG	1 cut(s)	1888
EcoT22I	ATGCAT	1 cut(s)	843
EcoT38I	GRGCYC	4 cut(s)	132, 1357, 1605, 1888
ErhI	CCWWGG	1 cut(s)	1888
FaeI	CATG	7 cut(s)	175, 217, 526, 718, 841, 1571, 1941
FatI	CATG	7 cut(s)	171, 213, 522, 714, 837, 1567, 1937
FauI	CCCGC	1 cut(s)	81
FauNDI	CATATG	2 cut(s)	240, 990
Fnu4HI	GCNGC	3 cut(s)	5, 746, 903
FokI	GGATG	5 cut(s)	247, 770, 1027, 1240, 1486
FriOI	GRGCYC	4 cut(s)	132, 1357, 1605, 1888
Fsp4HI	GCNGC	3 cut(s)	5, 746, 903
FspBI	CTAG	5 cut(s)	177, 771, 1734, 1821, 1920
GlaI	GCGC	2 cut(s)	77, 1155
GluI	GCNGC	3 cut(s)	5, 746, 903
GsaI	CCCAGC	1 cut(s)	1048
HaeII	RGCGCY	1 cut(s)	1157
HaeIII	GGCC	7 cut(s)	71, 125, 437, 1018, 1103, 1235, 1355
HapII	CCGG	2 cut(s)	8, 1905
HgaI	GACGC	1 cut(s)	24
HhaI	GCGC	2 cut(s)	78, 1156
Hin1I	GRCGYC	1 cut(s)	35
Hin1II	CATG	7 cut(s)	175, 217, 526, 718, 841, 1571, 1941
Hin6I	GCGC	2 cut(s)	76, 1154
HinP1I	GCGC	2 cut(s)	76, 1154
HpaII	CCGG	2 cut(s)	8, 1905
HphI	GGTGA	2 cut(s)	997, 1381
Hpy166II	GTNNAC	3 cut(s)	1135, 1184, 1361
Hpy188I	TCNGA	3 cut(s)	552, 1437, 1600
Hpy8I	GTNNAC	3 cut(s)	1135, 1184, 1361
Hpy99I	CGWCG	4 cut(s)	16, 34, 53, 110
HpyAV	CCTTC	7 cut(s)	171, 178, 316, 475, 532, 1015, 1566
HpyCH4III	ACNGT	3 cut(s)	205, 362, 977
HpyCH4IV	ACGT	1 cut(s)	1334
HpyF10VI	GCNNNNNNNGC	2 cut(s)	371, 1024
HpySE526I	ACGT	1 cut(s)	1334
Hsp92I	GRCGYC	1 cut(s)	35
Hsp92II	CATG	7 cut(s)	175, 217, 526, 718, 841, 1571, 1941
HspAI	GCGC	2 cut(s)	76, 1154
KroI	GCCGGC	1 cut(s)	7
KroNI	GCCGGC	1 cut(s)	9
LmnI	GCTCC	2 cut(s)	1024, 1670
Lsp1109I	GCAGC	1 cut(s)	914
MaeI	CTAG	5 cut(s)	177, 771, 1734, 1821, 1920
MaeII	ACGT	1 cut(s)	1334
MaeIII	GTNAC	4 cut(s)	629, 963, 1335, 1498
MbiI	CCGCTC	1 cut(s)	1056
MfeI	CAATTG	2 cut(s)	1715, 1825
MflI	RGATCY	6 cut(s)	194, 544, 767, 1410, 1465, 1867
MhlI	GDGCHC	4 cut(s)	132, 1357, 1605, 1888
MlsI	TGGCCA	2 cut(s)	437, 1103
MluNI	TGGCCA	2 cut(s)	437, 1103
MlyI	GAGTC	3 cut(s)	134, 272, 308
MmeI	TCCRAC	3 cut(s)	735, 1355, 1940
Mox20I	TGGCCA	2 cut(s)	437, 1103
Mph1103I	ATGCAT	1 cut(s)	843
MreI	CGCCGGCG	1 cut(s)	7
MroNI	GCCGGC	1 cut(s)	7
MroXI	GAANNNNTTC	2 cut(s)	333, 938
MscI	TGGCCA	2 cut(s)	437, 1103
MseI	TTAA	7 cut(s)	741, 783, 858, 1010, 1119, 1814, 1859
MslI	CAYNNNNRTG	1 cut(s)	713
Msp20I	TGGCCA	2 cut(s)	437, 1103
MspA1I	CMGCKG	1 cut(s)	269
MspI	CCGG	2 cut(s)	8, 1905
MspR9I	CCNGG	2 cut(s)	340, 1366
MunI	CAATTG	2 cut(s)	1715, 1825
Mva1269I	GAATGC	2 cut(s)	841, 1899
MvaI	CCWGG	2 cut(s)	340, 1366
MvnI	CGCG	1 cut(s)	76
MwoI	GCNNNNNNNGC	2 cut(s)	371, 1024
NaeI	GCCGGC	1 cut(s)	9
NdeI	CATATG	2 cut(s)	240, 990
NgoMIV	GCCGGC	1 cut(s)	7
NlaIII	CATG	7 cut(s)	175, 217, 526, 718, 841, 1571, 1941
NlaIV	GGNNCC	8 cut(s)	21, 72, 897, 941, 1026, 1355, 1740, 1909
NmeAIII	GCCGAG	3 cut(s)	47, 151, 1105
NmuCI	GTSAC	3 cut(s)	629, 963, 1498
NsiI	ATGCAT	1 cut(s)	843
NspI	RCATGY	2 cut(s)	217, 841
PaeI	GCATGC	1 cut(s)	841
PagI	TCATGA	1 cut(s)	1567
PasI	CCCWGGG	2 cut(s)	339, 1365
PcsI	WCGNNNNNNNCGW	2 cut(s)	38, 105
PctI	GAATGC	2 cut(s)	841, 1899
PdiI	GCCGGC	1 cut(s)	9
PdmI	GAANNNNTTC	2 cut(s)	333, 938
PfeI	GAWTC	8 cut(s)	180, 257, 557, 730, 778, 1144, 1612, 1849
PflFI	GACNNNGTC	2 cut(s)	34, 298
PkrI	GCNGC	3 cut(s)	6, 747, 904
PleI	GAGTC	3 cut(s)	134, 272, 307
PpsI	GAGTC	3 cut(s)	134, 272, 307
Psp124BI	GAGCTC	1 cut(s)	132
Psp1406I	AACGTT	1 cut(s)	1334
Psp6I	CCWGG	2 cut(s)	338, 1364
PspFI	CCCAGC	1 cut(s)	1044
PspGI	CCWGG	2 cut(s)	338, 1364
PspN4I	GGNNCC	8 cut(s)	21, 72, 897, 941, 1026, 1355, 1740, 1909
PspOMI	GGGCCC	1 cut(s)	1353
PspPI	GGNCC	4 cut(s)	70, 1233, 1353, 1354
PsuI	RGATCY	6 cut(s)	194, 544, 767, 1410, 1465, 1867
PsyI	GACNNNGTC	2 cut(s)	34, 298
PvuII	CAGCTG	1 cut(s)	269
RsaI	GTAC	7 cut(s)	412, 508, 952, 1075, 1183, 1785, 1843
RsaNI	GTAC	7 cut(s)	411, 507, 951, 1074, 1182, 1784, 1842
RseI	CAYNNNNRTG	1 cut(s)	713
SacI	GAGCTC	1 cut(s)	132
SaqAI	TTAA	7 cut(s)	741, 783, 858, 1010, 1119, 1814, 1859
SatI	GCNGC	3 cut(s)	5, 746, 903
Sau96I	GGNCC	4 cut(s)	70, 1233, 1353, 1354
ScaI	AGTACT	1 cut(s)	1075
SchI	GAGTC	3 cut(s)	134, 272, 308
ScrFI	CCNGG	2 cut(s)	340, 1366
SduI	GDGCHC	4 cut(s)	132, 1357, 1605, 1888
SfcI	CTRYAG	1 cut(s)	414
SgrAI	CRCCGGYG	1 cut(s)	7
SmiMI	CAYNNNNRTG	1 cut(s)	713
SphI	GCATGC	1 cut(s)	841
SsiI	CCGC	6 cut(s)	5, 74, 144, 443, 745, 1054
SspMI	CTAG	5 cut(s)	177, 771, 1734, 1821, 1920
SstI	GAGCTC	1 cut(s)	132
StyD4I	CCNGG	2 cut(s)	338, 1364
StyI	CCWWGG	1 cut(s)	1888
TaaI	ACNGT	3 cut(s)	205, 362, 977
TaiI	ACGT	1 cut(s)	1337
TaqI	TCGA	8 cut(s)	41, 48, 84, 138, 302, 399, 1126, 1298
TaqII	GACCGA	1 cut(s)	119
TatI	WGTACW	4 cut(s)	410, 506, 1073, 1181
TauI	GCSGC	2 cut(s)	7, 748
TfiI	GAWTC	8 cut(s)	180, 257, 557, 730, 778, 1144, 1612, 1849
Tru1I	TTAA	7 cut(s)	741, 783, 858, 1010, 1119, 1814, 1859
Tru9I	TTAA	7 cut(s)	741, 783, 858, 1010, 1119, 1814, 1859
TscAI	CASTG	5 cut(s)	367, 445, 838, 972, 1774
TseFI	GTSAC	3 cut(s)	629, 963, 1498
TseI	GCWGC	1 cut(s)	902
Tsp45I	GTSAC	3 cut(s)	629, 963, 1498
TspDTI	ATGAA	9 cut(s)	79, 160, 539, 689, 947, 1007, 1368, 1548, 1556
TspGWI	ACGGA	3 cut(s)	29, 299, 487
TspRI	CASTG	5 cut(s)	367, 445, 838, 972, 1774
Tth111I	GACNNNGTC	2 cut(s)	34, 298
XagI	CCTNNNNNAGG	1 cut(s)	1012
XapI	RAATTY	6 cut(s)	1031, 1107, 1208, 1418, 1514, 1688
XbaI	TCTAGA	1 cut(s)	770
XceI	RCATGY	2 cut(s)	217, 841
XmnI	GAANNNNTTC	2 cut(s)	333, 938
XspI	CTAG	5 cut(s)	177, 771, 1734, 1821, 1920
ZrmI	AGTACT	1 cut(s)	1075
Zsp2I	ATGCAT	1 cut(s)	843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.