Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000750

Physical Location & Seq

Genomic Coordinates Reverse (-)

14785927 .. 14791015

Gene Structure 5089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G140300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGCCCGATCTCGAACCCAACGCAGCTGCCGCGGCTGCTGCCACCGCCACCGCCACGGCGACGATGACGACGAAGATGATCGACGAGACCTACGAGTTCTCGGCCCCGCGCTTCTACGACTTCATAAAGGACGAGAGCGACGACGACAAGCGCCAGGCCGAGCGCTGGTTCGACGCCGCTCTTCCATATGCGCCTTCTCCCTTCATGCCTAGGATCAAGGCTGGTAGATCTTTTACGGTTGAGAGCATGTGCGATTTTAGTGAAGCAGAGGAAATGCAGAAGAACTTGGAATCATCCTCTGAATTAAAAGCTAATGATAAGTCTGTGGAAACTAAGCCTCAATCGGAGCTCATACCTGCTGAAGTCAAAGTTGATATAATCCCCAGGGTAGCTAAAGAAGAAAGCAATGTAAGCCAAGCTAATGTCTCTGCTGATAAAAGTATTAGCGAAGTTGATAAAGAGGAGGACCAGACAGCTAAAAAGATAGCAAGCATTGTCAGAAACCCGTCAGCACTGAAGCAAAAAAGTCATTTACAGTCGTCACAAACTAAAAACATCAAACCAAGTAGTGTGAAAAGAGAAAAAAAGGTGAAAAATGCAACTGGGACTCCCAATTTAGCTCAGGAAAATCAGGCAATTAAGCGACAGAAGTTGGACGGAGGAAGATCTAGACATATTCTTAATCCCAAACCCCAAACATTGCCCCACAAGTCAAAATTGGGTCATACCAGTGGCAGTTTCAATTTAAGCTCTTCAACTGCTACTATGCAAAAAGAGGACAGAAAGGTGTATGTTCGGGAATCTGCAGCACCATTTGTTTCGATGGCCGAAATGATGAAAAGGTTCCAATCAAGTACGAGAGACTTGTCAATGCAGCATGTTAATGGTTCTCTTTCACAAATGAAGCCCAAACTCACCTTGACAAGGCCTAAGGAGCCTGAATTTGAAACATCCCAACGTGTTCGTTCAGTGAGAGTAAAGAGTACTGCTGAGCTTGAAGAAGAGATGATGGCCAAAATTCCGAAGTTCAAGGCTCGACCACTAAACAAAAAGATTCTAGAAGCACCATCATTACCTGCAATACCGAGAAGTACACCTCAGCCACCGGAATTTCAGGAATTCCATTTGGAGACAATGGCAAGGGCAAACCAGAATGCAGAAACGGCTTCAGTAGCTTCAACGGAGGTGTCCCGTCAGAATAATCAAGGGAAGTCTCATCATCTTACTGAACCTAAAACCCCTGTGCTACATACATCATTGAGGGCCCGTCCACCCAGGGTGAAAAGTTCATTTGAAATTGAGCAGGAAGAGCTTGAAAGAATCCCAAAATTTAAGGCGAAGGCTCTAAACAAGAAGATATTTGAAAGTAAAGGAGATCTGGGGGTATTCTGTAATGCCAAGAAAAATGTGACTAAACCTCAGGAATTCCATTTTGCAACAAATGAAAGAATACCACCGCCACCTTCTTCCATTTTTGATATATTTGATAAGTTGTCTTTGAACTCAGAGCCCCACCAGAATCCAATTCCGAGAAACACAACACCAAACCCATTCCATCTCCACACAGAGGAAAGAGGGGCTGAGAAAGAAAGGAAATTTATTACCGTAGTGTGGCAGAAGCAATTGGAAGAAGAAAGAGCTAGGGTTCCCAAAGCTAATCCATATCCTTATACCACTGATTACCCTGTGATCCCACCAAAACCAGAGCCCAAGCAATGCACAAAACCAGAACCTTTCCAACTAGAGAGTTTGGTGAGGCATGAGGAGGAACTGCAGAGGGATATGGAAGAAAGACAGAGGCTGGAGAAAGAAGCAGCCCAGATAAGACTTTTTAAGGCACAACCAATCTTGAAAGAGGACCCAATTCCTGTTCCAGAAAAAGTGCGCAAGCCTCTTACCCAAGTTCAACAATTCAATCTCCATGTTGATCATCGGGCTGTTGGTAGAGCAGAATTTGATCAAAAGGTTAGGGAGAAAGAAATGATGTACAAGAGATACAGAGAAGAGAGCGATGCAGCAAGGATGGTGGAGGAAGAGAAGGCATTGAAGCAACTACGAAGGACTCTGGTACCCCATGCAAGGCCAGTGCCTAATTTTGAACATCCATTCTGCCCCCAGAAGTGTCCAAAGGAACCAACAAAAGCAAAGTCGCCACATTTACGTGTGCTTGAAAGGAAAGAAAGGCGAAGGATGATGATAAACTCTGCCATTTCCAGCGCTGCCGCGCAGATGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007051 GO:0007052 GO:0007346 GO:0008017 GO:0008092 GO:0008150 GO:0009507 GO:0009524 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0010564 GO:0015630 GO:0015631 GO:0016043 GO:0022402 GO:0022607 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032886 GO:0033043 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0050789 GO:0050794 GO:0051128 GO:0051225 GO:0051493 GO:0051726 GO:0060236 GO:0065007 GO:0070013 GO:0070507 GO:0070925 GO:0071840 GO:0090224 GO:0090307 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1902850 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPX2 TPX2_importin

Protein Analysis

746

Amino Acids

85.06

Weight (kDa)

9.48

Isoelectric Point (pI)

55.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03780 AT1G03780 AT1G03780
fragaria_vesca	FvH4_2g11956 FvH4_5g28370 FvH4_5g28401 FvH4_5g28402 FvH4_5g28440 FvH4_5g28450 FvH4_5g28450 FvH4_5g28471 FvH4_5g28480 FvH4_5g28561 FvH4_6g25610 FvH4_6g25610 FvH4_6g25690 FvH4_6g25731 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_6g26550 FvH4_c15g00040 FvH4_c17g00020 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090 FvH4_c17g00090
malus_domestica	MD09G1243900.v1.1 MD17G1235800.v1.1
prunus_persica	Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1 Prupe.3G140300_v2.0.a1
pyrus_communis	pycom17g23880
rosa_chinensis	RchiOBHm_Chr2g0127601
rosa_laevigata	RLG00000018552 RLG00000018951
rosa_multiflora	Rmu_ssc0000200.1_g000020
rosa_roxburghii	Rroxscaffold_2G00116560 Rroxscaffold_2G00123480
rosa_rugosa	Rorug02G0272600
rosa_samantha	Rh2AG324600 Rh2BG333900 Rh2CG312100 Rh2DG352100
rosa_wichuraiana	Rw2G026360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1886
Acc36I	ACCTGC	2 cut(s)	364, 1084
Acc65I	GGTACC	1 cut(s)	2068
AccB1I	GGYRCC	1 cut(s)	2068
AccBSI	CCGCTC	1 cut(s)	179
AccII	CGCG	3 cut(s)	32, 109, 2225
AciI	CCGC	8 cut(s)	30, 32, 45, 51, 107, 177, 1457, 2223
AclWI	GGATC	2 cut(s)	221, 1684
AcoI	YGGCCR	2 cut(s)	825, 1011
AcsI	RAATTY	8 cut(s)	941, 1017, 1109, 1118, 1328, 1424, 1595, 1952
AcuI	CTGAAG	3 cut(s)	381, 536, 1152
AcyI	GRCGYC	1 cut(s)	174
AfaI	GTAC	5 cut(s)	856, 985, 1093, 1988, 2070
AfeI	AGCGCT	2 cut(s)	164, 2218
AfiI	CCNNNNNNNGG	5 cut(s)	165, 924, 1567, 1611, 2079
AflIII	ACRYGT	2 cut(s)	958, 2161
AjnI	CCWGG	3 cut(s)	153, 383, 1274
Alw21I	GWGCWC	1 cut(s)	351
Alw26I	GTCTC	5 cut(s)	80, 430, 855, 1124, 1218
AlwI	GGATC	2 cut(s)	221, 1684
AlwNI	CAGNNNCTG	1 cut(s)	1801
Aor51HI	AGCGCT	2 cut(s)	164, 2218
AoxI	GGCC	7 cut(s)	102, 156, 825, 926, 1011, 1263, 2081
ApaI	GGGCCC	1 cut(s)	1267
ApeKI	GCWGC	9 cut(s)	23, 26, 35, 38, 806, 874, 1814, 2015, 2219
ApoI	RAATTY	8 cut(s)	941, 1017, 1109, 1118, 1328, 1424, 1595, 1952
ArsI	GACNNNNNNTTYG	2 cut(s)	2132, 2164
Asp700I	GAANNNNTTC	1 cut(s)	842
Asp718I	GGTACC	1 cut(s)	2068
AspA2I	CCTAGG	1 cut(s)	209
AspLEI	GCGC	7 cut(s)	111, 153, 165, 193, 1887, 2219, 2227
AspS9I	GGNCC	5 cut(s)	103, 466, 1263, 1264, 1858
AsuHPI	GGTGA	4 cut(s)	601, 907, 1291, 1765
AvaII	GGWCC	2 cut(s)	466, 1858
AvrII	CCTAGG	1 cut(s)	209
AxyI	CCTNAGG	2 cut(s)	930, 1419
BaeGI	GKGCMC	1 cut(s)	1267
BaeI	ACNNNNGTAYC	2 cut(s)	2052, 2085
BalI	TGGCCA	1 cut(s)	1013
BanI	GGYRCC	1 cut(s)	2068
BanII	GRGCYC	4 cut(s)	351, 1267, 1512, 1710
Bbv12I	GWGCWC	1 cut(s)	351
BbvCI	CCTCAGC	1 cut(s)	1098
BbvI	GCAGC	9 cut(s)	13, 22, 25, 35, 818, 886, 1826, 2027, 2206
BccI	CCATC	5 cut(s)	817, 1003, 1075, 1563, 2017
BceAI	ACGGC	2 cut(s)	72, 1179
BciT130I	CCWGG	3 cut(s)	155, 385, 1276
BclI	TGATCA	2 cut(s)	1927, 1957
BcoDI	GTCTC	5 cut(s)	80, 430, 855, 1124, 1218
BfaI	CTAG	5 cut(s)	210, 669, 1058, 1641, 1742
BfmI	CTRYAG	2 cut(s)	804, 1772
BfoI	RGCGCY	3 cut(s)	154, 166, 2220
BfuAI	ACCTGC	2 cut(s)	364, 1084
BglII	AGATCT	3 cut(s)	227, 665, 1375
BlnI	CCTAGG	1 cut(s)	209
BlpI	GCTNAGC	1 cut(s)	990
BmcAI	AGTACT	1 cut(s)	985
Bme1390I	CCNGG	3 cut(s)	155, 385, 1276
Bme18I	GGWCC	2 cut(s)	466, 1858
BmgT120I	GGNCC	5 cut(s)	103, 466, 1263, 1264, 1858
BmiI	GGNNCC	8 cut(s)	105, 845, 936, 1265, 1647, 1860, 2070, 2133
BmrFI	CCNGG	3 cut(s)	155, 385, 1276
BmrI	ACTGGG	1 cut(s)	612
BmsI	GCATC	1 cut(s)	2002
BmuI	ACTGGG	1 cut(s)	612
BpmI	CTGGAG	1 cut(s)	1823
Bpu10I	CCTNAGC	2 cut(s)	621, 1098
Bpu1102I	GCTNAGC	1 cut(s)	990
BsaAI	YACGTR	1 cut(s)	2162
BsaHI	GRCGYC	1 cut(s)	174
BsaI	GGTCTC	1 cut(s)	80
BsaJI	CCNNGG	7 cut(s)	30, 54, 209, 383, 384, 1274, 1275
BsaWI	WCCGGW	1 cut(s)	1105
BsaXI	ACNNNNNCTCC	2 cut(s)	592, 622
Bsc4I	CCNNNNNNNGG	5 cut(s)	165, 924, 1567, 1611, 2079
Bse1I	ACTGG	3 cut(s)	607, 729, 2084
Bse21I	CCTNAGG	2 cut(s)	930, 1419
Bse3DI	GCAATG	3 cut(s)	412, 698, 1721
BseBI	CCWGG	3 cut(s)	155, 385, 1276
BseDI	CCNNGG	7 cut(s)	30, 54, 209, 383, 384, 1274, 1275
BseGI	GGATG	5 cut(s)	293, 950, 2028, 2101, 2196
BseLI	CCNNNNNNNGG	5 cut(s)	165, 924, 1567, 1611, 2079
BseMI	GCAATG	3 cut(s)	412, 698, 1721
BseMII	CTCAG	6 cut(s)	635, 981, 1112, 1433, 1518, 1572
BseNI	ACTGG	3 cut(s)	607, 729, 2084
BseRI	GAGGAG	2 cut(s)	476, 1778
BseSI	GKGCMC	1 cut(s)	1267
BseXI	GCAGC	9 cut(s)	13, 22, 25, 35, 818, 886, 1826, 2027, 2206
Bsh1236I	CGCG	3 cut(s)	32, 109, 2225
BshFI	GGCC	7 cut(s)	104, 158, 827, 928, 1013, 1265, 2083
BshNI	GGYRCC	1 cut(s)	2068
BsiHKAI	GWGCWC	1 cut(s)	351
BsiSI	CCGG	1 cut(s)	1106
BslFI	GGGAC	2 cut(s)	619, 1174
BslI	CCNNNNNNNGG	5 cut(s)	165, 924, 1567, 1611, 2079
BsmAI	GTCTC	5 cut(s)	80, 430, 855, 1124, 1218
BsmFI	GGGAC	2 cut(s)	619, 1174
BsmI	GAATGC	1 cut(s)	1159
BsnI	GGCC	7 cut(s)	104, 158, 827, 928, 1013, 1265, 2083
Bso31I	GGTCTC	1 cut(s)	80
Bsp120I	GGGCCC	1 cut(s)	1263
Bsp1286I	GDGCHC	4 cut(s)	351, 1267, 1512, 1710
Bsp1407I	TGTACA	1 cut(s)	1986
Bsp143I	GATC	9 cut(s)	7, 78, 213, 227, 665, 1375, 1689, 1927, 1957
Bsp1720I	GCTNAGC	1 cut(s)	990
BspACI	CCGC	8 cut(s)	30, 32, 45, 51, 107, 177, 1457, 2223
BspANI	GGCC	7 cut(s)	104, 158, 827, 928, 1013, 1265, 2083
BspCNI	CTCAG	6 cut(s)	634, 982, 1111, 1432, 1517, 1573
BspFNI	CGCG	3 cut(s)	32, 109, 2225
BspLI	GGNNCC	8 cut(s)	105, 845, 936, 1265, 1647, 1860, 2070, 2133
BspMAI	CTGCAG	2 cut(s)	808, 1776
BspMI	ACCTGC	2 cut(s)	364, 1084
BspPI	GGATC	2 cut(s)	221, 1684
BspQI	GCTCTTC	3 cut(s)	186, 757, 1302
BspT107I	GGYRCC	1 cut(s)	2068
BspTNI	GGTCTC	1 cut(s)	80
BsrBI	CCGCTC	1 cut(s)	179
BsrDI	GCAATG	3 cut(s)	412, 698, 1721
BsrGI	TGTACA	1 cut(s)	1986
BsrI	ACTGG	3 cut(s)	607, 729, 2084
BssECI	CCNNGG	7 cut(s)	30, 54, 209, 383, 384, 1274, 1275
BssMI	GATC	9 cut(s)	7, 78, 213, 227, 665, 1375, 1689, 1927, 1957
BssNI	GRCGYC	1 cut(s)	174
BssT1I	CCWWGG	1 cut(s)	209
Bst2UI	CCWGG	3 cut(s)	155, 385, 1276
Bst4CI	ACNGT	3 cut(s)	238, 537, 1606
Bst6I	CTCTTC	6 cut(s)	186, 757, 996, 1302, 1998, 2028
BstACI	GRCGYC	1 cut(s)	174
BstAUI	TGTACA	1 cut(s)	1986
BstBAI	YACGTR	1 cut(s)	2162
BstC8I	GCNNGC	2 cut(s)	490, 1889
BstDEI	CTNAG	8 cut(s)	333, 621, 930, 990, 1098, 1419, 1504, 1581
BstDSI	CCRYGG	2 cut(s)	30, 54
BstENI	CCTNNNNNAGG	1 cut(s)	922
BstF5I	GGATG	5 cut(s)	293, 950, 2028, 2101, 2196
BstFNI	CGCG	3 cut(s)	32, 109, 2225
BstH2I	RGCGCY	3 cut(s)	154, 166, 2220
BstHHI	GCGC	7 cut(s)	111, 153, 165, 193, 1887, 2219, 2227
BstKTI	GATC	9 cut(s)	10, 81, 216, 230, 668, 1378, 1692, 1930, 1960
BstMAI	GTCTC	5 cut(s)	80, 430, 855, 1124, 1218
BstMBI	GATC	9 cut(s)	7, 78, 213, 227, 665, 1375, 1689, 1927, 1957
BstNI	CCWGG	3 cut(s)	155, 385, 1276
BstNSI	RCATGY	2 cut(s)	250, 881
BstSCI	CCNGG	3 cut(s)	153, 383, 1274
BstSFI	CTRYAG	2 cut(s)	804, 1772
BstSLI	GKGCMC	1 cut(s)	1267
BstUI	CGCG	3 cut(s)	32, 109, 2225
BstV1I	GCAGC	9 cut(s)	13, 22, 25, 35, 818, 886, 1826, 2027, 2206
BstX2I	RGATCY	3 cut(s)	227, 665, 1375
BstYI	RGATCY	3 cut(s)	227, 665, 1375
Bsu36I	CCTNAGG	2 cut(s)	930, 1419
BsuRI	GGCC	7 cut(s)	104, 158, 827, 928, 1013, 1265, 2083
BtgI	CCRYGG	2 cut(s)	30, 54
BtgZI	GCGATG	1 cut(s)	2025
BtsCI	GGATG	5 cut(s)	293, 950, 2028, 2101, 2196
BtsIMutI	CAGTG	5 cut(s)	512, 736, 975, 1674, 2091
BveI	ACCTGC	2 cut(s)	364, 1084
Cac8I	GCNNGC	2 cut(s)	490, 1889
CaiI	CAGNNNCTG	1 cut(s)	1801
CfoI	GCGC	7 cut(s)	111, 153, 165, 193, 1887, 2219, 2227
Cfr13I	GGNCC	5 cut(s)	103, 466, 1263, 1264, 1858
Cfr42I	CCGCGG	1 cut(s)	33
CseI	GACGC	1 cut(s)	182
Csp6I	GTAC	5 cut(s)	855, 984, 1092, 1987, 2069
CspCI	CAANNNNNGTGG	2 cut(s)	2007, 2042
CviAII	CATG	6 cut(s)	205, 247, 878, 1760, 1922, 2075
CviQI	GTAC	5 cut(s)	855, 984, 1092, 1987, 2069
DdeI	CTNAG	8 cut(s)	333, 621, 930, 990, 1098, 1419, 1504, 1581
DpnI	GATC	9 cut(s)	9, 80, 215, 229, 667, 1377, 1691, 1929, 1959
DpnII	GATC	9 cut(s)	7, 78, 213, 227, 665, 1375, 1689, 1927, 1957
EaeI	YGGCCR	2 cut(s)	825, 1011
Eam1104I	CTCTTC	6 cut(s)	186, 757, 996, 1302, 1998, 2028
EarI	CTCTTC	6 cut(s)	186, 757, 996, 1302, 1998, 2028
Ecl136II	GAGCTC	1 cut(s)	349
Eco130I	CCWWGG	1 cut(s)	209
Eco147I	AGGCCT	1 cut(s)	928
Eco24I	GRGCYC	4 cut(s)	351, 1267, 1512, 1710
Eco31I	GGTCTC	1 cut(s)	80
Eco47I	GGWCC	2 cut(s)	466, 1858
Eco47III	AGCGCT	2 cut(s)	164, 2218
Eco53kI	GAGCTC	1 cut(s)	349
Eco57I	CTGAAG	3 cut(s)	381, 536, 1152
Eco81I	CCTNAGG	2 cut(s)	930, 1419
EcoICRI	GAGCTC	1 cut(s)	349
EcoNI	CCTNNNNNAGG	1 cut(s)	922
EcoO109I	RGGNCCY	2 cut(s)	1263, 1858
EcoRI	GAATTC	2 cut(s)	1118, 1424
EcoRII	CCWGG	3 cut(s)	153, 383, 1274
EcoT14I	CCWWGG	1 cut(s)	209
EcoT38I	GRGCYC	4 cut(s)	351, 1267, 1512, 1710
ErhI	CCWWGG	1 cut(s)	209
FaeI	CATG	6 cut(s)	208, 250, 881, 1763, 1925, 2078
FaqI	GGGAC	2 cut(s)	619, 1174
FatI	CATG	6 cut(s)	204, 246, 877, 1759, 1921, 2074
FauI	CCCGC	1 cut(s)	114
FauNDI	CATATG	1 cut(s)	187
FbaI	TGATCA	2 cut(s)	1927, 1957
FokI	GGATG	5 cut(s)	280, 937, 2035, 2088, 2203
FriOI	GRGCYC	4 cut(s)	351, 1267, 1512, 1710
FspBI	CTAG	5 cut(s)	210, 669, 1058, 1641, 1742
FspI	TGCGCA	1 cut(s)	1886
GlaI	GCGC	7 cut(s)	110, 152, 164, 192, 1886, 2218, 2226
GsuI	CTGGAG	1 cut(s)	1823
HaeII	RGCGCY	3 cut(s)	154, 166, 2220
HaeIII	GGCC	7 cut(s)	104, 158, 827, 928, 1013, 1265, 2083
HapII	CCGG	1 cut(s)	1106
HgaI	GACGC	1 cut(s)	182
HhaI	GCGC	7 cut(s)	111, 153, 165, 193, 1887, 2219, 2227
Hin1I	GRCGYC	1 cut(s)	174
Hin1II	CATG	6 cut(s)	208, 250, 881, 1763, 1925, 2078
Hin6I	GCGC	7 cut(s)	109, 151, 163, 191, 1885, 2217, 2225
HinP1I	GCGC	7 cut(s)	109, 151, 163, 191, 1885, 2217, 2225
HinfI	GANTC	7 cut(s)	290, 607, 800, 1054, 1320, 1519, 2062
HpaII	CCGG	1 cut(s)	1106
HphI	GGTGA	4 cut(s)	601, 907, 1291, 1765
Hpy166II	GTNNAC	2 cut(s)	1094, 1271
Hpy188I	TCNGA	7 cut(s)	301, 346, 500, 1023, 1197, 1507, 1530
Hpy188III	TCNNGA	9 cut(s)	11, 623, 669, 797, 1058, 1115, 1421, 1849, 1874
Hpy8I	GTNNAC	2 cut(s)	1094, 1271
Hpy99I	CGWCG	6 cut(s)	64, 73, 86, 143, 146, 176
HpyAV	CCTTC	7 cut(s)	204, 211, 1333, 1473, 2032, 2052, 2181
HpyCH4III	ACNGT	3 cut(s)	238, 537, 1606
HpyCH4IV	ACGT	2 cut(s)	958, 2161
HpyF3I	CTNAG	8 cut(s)	333, 621, 930, 990, 1098, 1419, 1504, 1581
HpySE526I	ACGT	2 cut(s)	958, 2161
Hsp92I	GRCGYC	1 cut(s)	174
Hsp92II	CATG	6 cut(s)	208, 250, 881, 1763, 1925, 2078
HspAI	GCGC	7 cut(s)	109, 151, 163, 191, 1885, 2217, 2225
KpnI	GGTACC	1 cut(s)	2072
Ksp22I	TGATCA	2 cut(s)	1927, 1957
KspI	CCGCGG	1 cut(s)	33
Kzo9I	GATC	9 cut(s)	7, 78, 213, 227, 665, 1375, 1689, 1927, 1957
LguI	GCTCTTC	3 cut(s)	186, 757, 1302
LmnI	GCTCC	2 cut(s)	346, 934
Lsp1109I	GCAGC	9 cut(s)	13, 22, 25, 35, 818, 886, 1826, 2027, 2206
LweI	GCATC	1 cut(s)	2002
MaeI	CTAG	5 cut(s)	210, 669, 1058, 1641, 1742
MaeII	ACGT	2 cut(s)	958, 2161
MaeIII	GTNAC	2 cut(s)	540, 1408
MalI	GATC	9 cut(s)	9, 80, 215, 229, 667, 1377, 1691, 1929, 1959
MbiI	CCGCTC	1 cut(s)	179
MboI	GATC	9 cut(s)	7, 78, 213, 227, 665, 1375, 1689, 1927, 1957
MfeI	CAATTG	1 cut(s)	1622
MflI	RGATCY	3 cut(s)	227, 665, 1375
MhlI	GDGCHC	4 cut(s)	351, 1267, 1512, 1710
MlsI	TGGCCA	1 cut(s)	1013
MluNI	TGGCCA	1 cut(s)	1013
MlyI	GAGTC	2 cut(s)	601, 2056
MmeI	TCCRAC	2 cut(s)	633, 1762
Mox20I	TGGCCA	1 cut(s)	1013
MroXI	GAANNNNTTC	1 cut(s)	842
MscI	TGGCCA	1 cut(s)	1013
MseI	TTAA	7 cut(s)	305, 639, 681, 746, 882, 1332, 1833
MslI	CAYNNNNRTG	3 cut(s)	729, 882, 2160
Msp20I	TGGCCA	1 cut(s)	1013
MspA1I	CMGCKG	2 cut(s)	26, 32
MspI	CCGG	1 cut(s)	1106
MspR9I	CCNGG	3 cut(s)	155, 385, 1276
MunI	CAATTG	1 cut(s)	1622
Mva1269I	GAATGC	1 cut(s)	1159
MvaI	CCWGG	3 cut(s)	155, 385, 1276
MvnI	CGCG	3 cut(s)	32, 109, 2225
NdeI	CATATG	1 cut(s)	187
NdeII	GATC	9 cut(s)	7, 78, 213, 227, 665, 1375, 1689, 1927, 1957
NlaIII	CATG	6 cut(s)	208, 250, 881, 1763, 1925, 2078
NlaIV	GGNNCC	8 cut(s)	105, 845, 936, 1265, 1647, 1860, 2070, 2133
NmeAIII	GCCGAG	2 cut(s)	80, 184
NmuCI	GTSAC	2 cut(s)	540, 1408
NsbI	TGCGCA	1 cut(s)	1886
NspI	RCATGY	2 cut(s)	250, 881
PasI	CCCWGGG	2 cut(s)	384, 1275
PceI	AGGCCT	1 cut(s)	928
PciSI	GCTCTTC	3 cut(s)	186, 757, 1302
PcsI	WCGNNNNNNNCGW	3 cut(s)	68, 90, 138
PctI	GAATGC	1 cut(s)	1159
PdmI	GAANNNNTTC	1 cut(s)	842
PfeI	GAWTC	5 cut(s)	290, 800, 1054, 1320, 1519
PleI	GAGTC	2 cut(s)	601, 2056
PpsI	GAGTC	2 cut(s)	601, 2056
Ppu21I	YACGTR	1 cut(s)	2162
PpuMI	RGGWCCY	1 cut(s)	1858
Psp124BI	GAGCTC	1 cut(s)	351
Psp5II	RGGWCCY	1 cut(s)	1858
Psp6I	CCWGG	3 cut(s)	153, 383, 1274
PspGI	CCWGG	3 cut(s)	153, 383, 1274
PspN4I	GGNNCC	8 cut(s)	105, 845, 936, 1265, 1647, 1860, 2070, 2133
PspOMI	GGGCCC	1 cut(s)	1263
PspPI	GGNCC	5 cut(s)	103, 466, 1263, 1264, 1858
PspPPI	RGGWCCY	1 cut(s)	1858
PstI	CTGCAG	2 cut(s)	808, 1776
PstNI	CAGNNNCTG	1 cut(s)	1801
PsuI	RGATCY	3 cut(s)	227, 665, 1375
PvuII	CAGCTG	1 cut(s)	26
RsaI	GTAC	5 cut(s)	856, 985, 1093, 1988, 2070
RsaNI	GTAC	5 cut(s)	855, 984, 1092, 1987, 2069
RseI	CAYNNNNRTG	3 cut(s)	729, 882, 2160
SacI	GAGCTC	1 cut(s)	351
SacII	CCGCGG	1 cut(s)	33
SapI	GCTCTTC	3 cut(s)	186, 757, 1302
SaqAI	TTAA	7 cut(s)	305, 639, 681, 746, 882, 1332, 1833
Sau3AI	GATC	9 cut(s)	7, 78, 213, 227, 665, 1375, 1689, 1927, 1957
Sau96I	GGNCC	5 cut(s)	103, 466, 1263, 1264, 1858
ScaI	AGTACT	1 cut(s)	985
SchI	GAGTC	2 cut(s)	601, 2056
ScrFI	CCNGG	3 cut(s)	155, 385, 1276
SduI	GDGCHC	4 cut(s)	351, 1267, 1512, 1710
SfaNI	GCATC	1 cut(s)	2002
SfcI	CTRYAG	2 cut(s)	804, 1772
Sfr303I	CCGCGG	1 cut(s)	33
SgrBI	CCGCGG	1 cut(s)	33
SinI	GGWCC	2 cut(s)	466, 1858
SmiMI	CAYNNNNRTG	3 cut(s)	729, 882, 2160
SseBI	AGGCCT	1 cut(s)	928
SsiI	CCGC	8 cut(s)	30, 32, 45, 51, 107, 177, 1457, 2223
SspMI	CTAG	5 cut(s)	210, 669, 1058, 1641, 1742
SstI	GAGCTC	1 cut(s)	351
StuI	AGGCCT	1 cut(s)	928
StyD4I	CCNGG	3 cut(s)	153, 383, 1274
StyI	CCWWGG	1 cut(s)	209
TaaI	ACNGT	3 cut(s)	238, 537, 1606
TaiI	ACGT	2 cut(s)	961, 2164
TaqI	TCGA	5 cut(s)	12, 81, 171, 821, 1036
TatI	WGTACW	3 cut(s)	983, 1091, 1986
TauI	GCSGC	4 cut(s)	32, 35, 179, 2225
TfiI	GAWTC	5 cut(s)	290, 800, 1054, 1320, 1519
Tru1I	TTAA	7 cut(s)	305, 639, 681, 746, 882, 1332, 1833
Tru9I	TTAA	7 cut(s)	305, 639, 681, 746, 882, 1332, 1833
TscAI	CASTG	5 cut(s)	519, 736, 975, 1681, 2091
TseFI	GTSAC	2 cut(s)	540, 1408
TseI	GCWGC	9 cut(s)	23, 26, 35, 38, 806, 874, 1814, 2015, 2219
Tsp45I	GTSAC	2 cut(s)	540, 1408
TspDTI	ATGAA	6 cut(s)	112, 193, 851, 917, 1278, 1458
TspGWI	ACGGA	2 cut(s)	672, 1196
TspRI	CASTG	5 cut(s)	519, 736, 975, 1681, 2091
VpaK11BI	GGWCC	2 cut(s)	466, 1858
XagI	CCTNNNNNAGG	1 cut(s)	922
XapI	RAATTY	8 cut(s)	941, 1017, 1109, 1118, 1328, 1424, 1595, 1952
XbaI	TCTAGA	2 cut(s)	668, 1057
XceI	RCATGY	2 cut(s)	250, 881
XmaJI	CCTAGG	1 cut(s)	209
XmnI	GAANNNNTTC	1 cut(s)	842
XspI	CTAG	5 cut(s)	210, 669, 1058, 1641, 1742
ZrmI	AGTACT	1 cut(s)	985

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.