FvH4_6g29180

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000551
Physical Location & Seq
Reverse (-)
22518029 .. 22526977
8949 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g29180.t3

Sequence Viewer

Length: 1737 bp
ATGGGGGGAGCTTGTTCTAGGAAGAGAAACCATCGAGATGATGAAGATAACTTTCCTAGAGGGATTACCAGAAGATATTCCAAGAGTGGGAGTTCAAAGTGGTTGGCAACCTCCTTCTCTCGACCTGCTGCAGATATTCAACATGACAAAGGGCAATGCCCATCCCTCATGGACTTGTGCGCATGGAAAATATGTGAGGACATTGATAAATATAGCACATTCTCTAAGCTCCCAAGAGATATTAGTCAGCATATCATTAATGAGTTGGTGTACTCTGGATGCCTAACTGATGTTTCTTTTGAAGGTTTCCGGGATTGTGCTTTGCAGGATCTTTACTTGGGAGAATACCCTAATGTGAATGATGCGTGGATGGATGTCATATCCTCACAAGGATCATCTTTACTCTCTCTTGATCTCTCTGGTTCTGATGTTACTGACAGTGGGTTAATTTATCTCAAAGATTGCACAAATCTCCAAGCGTTAAACCTGAATGATTGTGATGAGATATCAGATCATGGGCTGGAACACATAAGTGGTCTATCTAACTTGACGAATTTGAGTTTTAGAAGAAACTGTTCAATCACTTCTCATGGAATGAGTGCCTTTTCTAGTTTATTTGGTTTGATCAAGTTGGACTTGGAGAAATGCCCAGGGATCCATGGTGGACTTGTTCATCTTCAAGGTTTAACAAATTTAGAGTCTCTGAATATCAAATGGTGCAACTCCATATCAGATGCTGACATGAAGCCTCTCTCAGGGCTTACAAATTTGAAATGCTTACAAATTTCCTGCAGTAAGGTTACTGATTCTGGCATCACTTATTTGAAAGGTCTTCACAATCTTTCTCTTCTGAACTTGGAGGGATGCCCGGTAACTGCTGCATGTTTGGACTCTCTTTCAGCTCTTGATGCCCTTTTATATCTGAATCTGAGCCGATGTCATCTGACTGATGGAGGATGTGAGAAGTTTTCTCGATTTGGAAACTTAAAAGTACTAAACTTGGGGTTCAATGAAATCACAGACGCCTGTCTAGTGCACTTAAAAGGTTTGACAAATTTGGAGAGTTTGAACGTGGATTCATGTAGAATTGGTGACAAAGGGCTGGTTAACTTGACAGGTCTTAAGCATCTGAAATGCCTGGAACTGTCAGATACTGACGTTGGAAGCAATGGGCTCCGCCATTTGTCAGGATTGGTTAAATTAGAAAGTATAAATCTGTCTTTCACTGAGGTTTGTGATAGTGGATTAAGAAAGCTGTCCGGGCTATCATCTCTTAAATCACTTAATTTGGATGCACATAAGATAACAGATACTGGACTTGCAGCTCTTACAAGTTTGACTGGCTTGACACACCTGGATCTGTTTGGAGCTCGGATTACAGATTCTGGAACAAATGATCTGCGAAGCCTTAAGAACTTGAGGTCCCTAGAAATATGTGGTGGAAGATTGACAGATGCTGGAGTAAAGAATATTAAAGATCTTTCATCCTTGACTCTATTGAATCTATCACAAAACTGCAACCTAACGGATAAAACCTTAGAGTTGATTTCGGGGCTCACAGGATTGGTCTCTTTAAACGTTTCAAATTCTCGTATCACCAACTCAGGACTTCGTCATTTGAAACTGCTTAAGAATTTGAAGTCTCTGACTTTGGAGGGCTGCAAGGTGACTGTGAATGACATTAGGAAGCTTCAGATGACTGACCTTCCAAATCTGGTAAGCTTCCGGCCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_5 LRR_6 LRR_8

Protein Analysis

579

Amino Acids

62.85

Weight (kDa)

6.25

Isoelectric Point (pI)

34.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 150 - 204 2.5e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
LRR_14 PF23598 274 - 432 2.9e-07 Leucine-rich repeat region
LRR_8 PF13855 307 - 363 1.5e-06 Leucine rich repeat
LRR_8 PF13855 472 - 532 7.6e-08 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15740
fragaria_vesca FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_7g04581
malus_domestica MD02G1018400.v1.1 MD15G1162400.v1.1 MD17G1217000.v1.1
prunus_persica Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1
pyrus_communis pycom15g14600 pycom17g22160
rosa_chinensis RchiOBHm_Chr1g0325881 RchiOBHm_Chr2g0087081 RchiOBHm_Chr2g0134401 RchiOBHm_Chr6g0252571
rosa_laevigata RLG00000015828 RLG00000019390
rosa_multiflora Rmu_co8182664.1_g000001 Rmu_sc0005550.1_g000003 Rmu_sc0013657.1_g000009 Rmu_ssc0000064.1_g000031
rosa_roxburghii Rroxscaffold_2G00110270 Rroxscaffold_3G00253750 Rroxscaffold_7G00171870
rosa_rugosa Rorug01G0472200 Rorug01G0472300 Rorug02G0316800 Rorug05G0039000 Rorug05G0039100 Rorug06G0116400
rosa_samantha Rh1DG076800 Rh2AG025600 Rh2AG369200 Rh2BG025300 Rh2BG375300 Rh2CG025900 Rh2CG352900 Rh2CG433900 Rh2DG025800 Rh2DG392400 Rh3DG227300 Rh7BG234800 Rh7CG498200
rosa_wichuraiana Rw1G005860 Rw2G002030 Rw2G030080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 181
Acc36I ACCTGC 1 cut(s) 133
AciI CCGC 1 cut(s) 1177
AclI AACGTT 1 cut(s) 1578
AclWI GGATC 5 cut(s) 336, 400, 649, 662, 1365
AcsI RAATTY 7 cut(s) 553, 691, 766, 783, 1054, 1585, 1633
AcuI CTGAAG 1 cut(s) 1676
AcyI GRCGYC 1 cut(s) 1023
AfaI GTAC 2 cut(s) 272, 993
AfiI CCNNNNNNNGG 2 cut(s) 87, 755
AflII CTTAAG 3 cut(s) 1121, 1409, 1628
AjnI CCWGG 3 cut(s) 649, 1137, 1353
AleI CACNNNNGTG 1 cut(s) 531
AloI GAACNNNNNNTCC 2 cut(s) 1406, 1438
AluBI AGCT 8 cut(s) 11, 229, 902, 1255, 1325, 1370, 1690, 1722
AluI AGCT 8 cut(s) 11, 229, 902, 1255, 1325, 1370, 1690, 1722
Alw21I GWGCWC 2 cut(s) 1038, 1372
Alw26I GTCTC 3 cut(s) 705, 1573, 1647
Alw44I GTGCAC 1 cut(s) 1034
AlwI GGATC 5 cut(s) 336, 400, 649, 662, 1365
AlwNI CAGNNNCTG 5 cut(s) 737, 1154, 1313, 1385, 1457
AoxI GGCC 1 cut(s) 1727
ApaLI GTGCAC 1 cut(s) 1034
ApeKI GCWGC 4 cut(s) 128, 878, 1322, 1659
ApoI RAATTY 7 cut(s) 553, 691, 766, 783, 1054, 1585, 1633
ArsI GACNNNNNNTTYG 2 cut(s) 683, 715
AseI ATTAAT 1 cut(s) 258
Asp700I GAANNNNTTC 2 cut(s) 76, 574
AspLEI GCGC 1 cut(s) 182
AspS9I GGNCC 1 cut(s) 1422
AsuC2I CCSGG 3 cut(s) 311, 869, 1261
AsuHPI GGTGA 3 cut(s) 1103, 1588, 1678
AvaII GGWCC 1 cut(s) 1422
BaeGI GKGCMC 1 cut(s) 1038
BaeI ACNNNNGTAYC 2 cut(s) 1143, 1176
BamHI GGATCC 1 cut(s) 654
BanII GRGCYC 3 cut(s) 1176, 1372, 1557
BbsI GAAGAC 1 cut(s) 824
Bbv12I GWGCWC 2 cut(s) 1038, 1372
BbvI GCAGC 4 cut(s) 115, 865, 1334, 1646
BccI CCATC 4 cut(s) 39, 169, 364, 944
BciT130I CCWGG 3 cut(s) 651, 1139, 1355
BclI TGATCA 1 cut(s) 624
BcnI CCSGG 3 cut(s) 311, 869, 1261
BcoDI GTCTC 3 cut(s) 705, 1573, 1647
BfaI CTAG 5 cut(s) 18, 57, 609, 1031, 1427
BfmI CTRYAG 2 cut(s) 129, 790
BfrI CTTAAG 3 cut(s) 1121, 1409, 1628
BfuAI ACCTGC 1 cut(s) 133
BglII AGATCT 1 cut(s) 1477
BisI GCNGC 4 cut(s) 129, 879, 1323, 1660
BlsI GCNGC 4 cut(s) 130, 880, 1324, 1661
BmcAI AGTACT 1 cut(s) 993
Bme1390I CCNGG 6 cut(s) 311, 651, 869, 1139, 1261, 1355
Bme18I GGWCC 1 cut(s) 1422
BmgT120I GGNCC 1 cut(s) 1422
BmiI GGNNCC 3 cut(s) 656, 1175, 1424
BmrFI CCNGG 6 cut(s) 311, 651, 869, 1139, 1261, 1355
BmsI GCATC 9 cut(s) 269, 352, 724, 822, 854, 898, 1135, 1282, 1444
BoxI GACNNNNGTC 1 cut(s) 1026
BpiI GAAGAC 1 cut(s) 824
BpmI CTGGAG 1 cut(s) 1479
BpuEI CTTGAG 1 cut(s) 1438
BpuMI CCSGG 3 cut(s) 311, 869, 1261
BsaHI GRCGYC 1 cut(s) 1023
BsaI GGTCTC 1 cut(s) 1573
BsaJI CCNNGG 3 cut(s) 649, 650, 658
Bsc4I CCNNNNNNNGG 2 cut(s) 87, 755
Bse1I ACTGG 2 cut(s) 1318, 1345
Bse3DI GCAATG 2 cut(s) 161, 1174
BseBI CCWGG 3 cut(s) 651, 1139, 1355
BseDI CCNNGG 3 cut(s) 649, 650, 658
BseGI GGATG 8 cut(s) 161, 284, 375, 379, 869, 962, 1297, 1484
BseLI CCNNNNNNNGG 2 cut(s) 87, 755
BseMI GCAATG 2 cut(s) 161, 1174
BseMII CTCAG 4 cut(s) 768, 920, 1218, 1617
BseNI ACTGG 2 cut(s) 1318, 1345
BseSI GKGCMC 1 cut(s) 1038
BseXI GCAGC 4 cut(s) 115, 865, 1334, 1646
BshFI GGCC 1 cut(s) 1729
BsiHKAI GWGCWC 2 cut(s) 1038, 1372
BsiSI CCGG 4 cut(s) 310, 869, 1260, 1726
BslFI GGGAC 1 cut(s) 1408
BslI CCNNNNNNNGG 2 cut(s) 87, 755
BsmAI GTCTC 3 cut(s) 705, 1573, 1647
BsmFI GGGAC 1 cut(s) 1408
BsnI GGCC 1 cut(s) 1729
Bso31I GGTCTC 1 cut(s) 1573
Bsp1286I GDGCHC 4 cut(s) 1038, 1176, 1372, 1557
Bsp143I GATC 9 cut(s) 328, 392, 412, 511, 624, 654, 1357, 1396, 1477
Bsp19I CCATGG 1 cut(s) 658
BspACI CCGC 1 cut(s) 1177
BspANI GGCC 1 cut(s) 1729
BspCNI CTCAG 4 cut(s) 767, 921, 1219, 1616
BspLI GGNNCC 3 cut(s) 656, 1175, 1424
BspMAI CTGCAG 2 cut(s) 133, 794
BspMI ACCTGC 1 cut(s) 133
BspPI GGATC 5 cut(s) 336, 400, 649, 662, 1365
BspTI CTTAAG 3 cut(s) 1121, 1409, 1628
BspTNI GGTCTC 1 cut(s) 1573
BsrDI GCAATG 2 cut(s) 161, 1174
BsrI ACTGG 2 cut(s) 1318, 1345
BssECI CCNNGG 3 cut(s) 649, 650, 658
BssMI GATC 9 cut(s) 328, 392, 412, 511, 624, 654, 1357, 1396, 1477
BssNI GRCGYC 1 cut(s) 1023
BssT1I CCWWGG 1 cut(s) 658
Bst2UI CCWGG 3 cut(s) 651, 1139, 1355
Bst4CI ACNGT 4 cut(s) 440, 575, 1146, 1672
Bst6I CTCTTC 2 cut(s) 17, 852
BstACI GRCGYC 1 cut(s) 1023
BstAFI CTTAAG 3 cut(s) 1121, 1409, 1628
BstDEI CTNAG 6 cut(s) 225, 754, 929, 1227, 1537, 1603
BstDSI CCRYGG 1 cut(s) 658
BstENI CCTNNNNNAGG 1 cut(s) 753
BstF5I GGATG 8 cut(s) 161, 284, 375, 379, 869, 962, 1297, 1484
BstHHI GCGC 1 cut(s) 182
BstKTI GATC 9 cut(s) 331, 395, 415, 514, 627, 657, 1360, 1399, 1480
BstMAI GTCTC 3 cut(s) 705, 1573, 1647
BstMBI GATC 9 cut(s) 328, 392, 412, 511, 624, 654, 1357, 1396, 1477
BstMWI GCNNNNNNNGC 2 cut(s) 908, 1261
BstNI CCWGG 3 cut(s) 651, 1139, 1355
BstNSI RCATGY 1 cut(s) 885
BstPAI GACNNNNGTC 1 cut(s) 1026
BstSCI CCNGG 6 cut(s) 309, 649, 867, 1137, 1259, 1353
BstSFI CTRYAG 2 cut(s) 129, 790
BstSLI GKGCMC 1 cut(s) 1038
BstV1I GCAGC 4 cut(s) 115, 865, 1334, 1646
BstV2I GAAGAC 1 cut(s) 824
BstX2I RGATCY 4 cut(s) 328, 654, 1357, 1477
BstYI RGATCY 4 cut(s) 328, 654, 1357, 1477
BsuRI GGCC 1 cut(s) 1729
BtgI CCRYGG 1 cut(s) 658
BtsCI GGATG 8 cut(s) 161, 284, 375, 379, 869, 962, 1297, 1484
BtsIMutI CAGTG 2 cut(s) 445, 1224
BveI ACCTGC 1 cut(s) 133
CaiI CAGNNNCTG 5 cut(s) 737, 1154, 1313, 1385, 1457
CfoI GCGC 1 cut(s) 182
Cfr13I GGNCC 1 cut(s) 1422
CseI GACGC 1 cut(s) 1031
Csp6I GTAC 2 cut(s) 271, 992
CviAII CATG 9 cut(s) 143, 169, 183, 515, 590, 659, 742, 882, 1080
CviQI GTAC 2 cut(s) 271, 992
DdeI CTNAG 6 cut(s) 225, 754, 929, 1227, 1537, 1603
DpnI GATC 9 cut(s) 330, 394, 414, 513, 626, 656, 1359, 1398, 1479
DpnII GATC 9 cut(s) 328, 392, 412, 511, 624, 654, 1357, 1396, 1477
DraI TTTAAA 1 cut(s) 1575
Eam1104I CTCTTC 2 cut(s) 17, 852
EarI CTCTTC 2 cut(s) 17, 852
EciI GGCGGA 1 cut(s) 1166
Ecl136II GAGCTC 1 cut(s) 1370
Eco130I CCWWGG 1 cut(s) 658
Eco24I GRGCYC 3 cut(s) 1176, 1372, 1557
Eco31I GGTCTC 1 cut(s) 1573
Eco32I GATATC 1 cut(s) 507
Eco47I GGWCC 1 cut(s) 1422
Eco53kI GAGCTC 1 cut(s) 1370
Eco57I CTGAAG 1 cut(s) 1676
EcoICRI GAGCTC 1 cut(s) 1370
EcoNI CCTNNNNNAGG 1 cut(s) 753
EcoO109I RGGNCCY 1 cut(s) 1422
EcoRII CCWGG 3 cut(s) 649, 1137, 1353
EcoRV GATATC 1 cut(s) 507
EcoT14I CCWWGG 1 cut(s) 658
EcoT38I GRGCYC 3 cut(s) 1176, 1372, 1557
ErhI CCWWGG 1 cut(s) 658
FaeI CATG 9 cut(s) 146, 172, 186, 518, 593, 662, 745, 885, 1083
FalI AAGNNNNNCTT 2 cut(s) 620, 652
FaqI GGGAC 1 cut(s) 1408
FatI CATG 9 cut(s) 142, 168, 182, 514, 589, 658, 741, 881, 1079
FbaI TGATCA 1 cut(s) 624
Fnu4HI GCNGC 4 cut(s) 129, 879, 1323, 1660
FokI GGATG 8 cut(s) 148, 291, 382, 386, 876, 969, 1304, 1471
FriOI GRGCYC 3 cut(s) 1176, 1372, 1557
Fsp4HI GCNGC 4 cut(s) 129, 879, 1323, 1660
FspAI RTGCGCAY 1 cut(s) 181
FspBI CTAG 5 cut(s) 18, 57, 609, 1031, 1427
FspI TGCGCA 1 cut(s) 181
GlaI GCGC 1 cut(s) 181
GluI GCNGC 4 cut(s) 129, 879, 1323, 1660
GsuI CTGGAG 1 cut(s) 1479
HaeIII GGCC 1 cut(s) 1729
HapII CCGG 4 cut(s) 310, 869, 1260, 1726
HgaI GACGC 1 cut(s) 1031
HhaI GCGC 1 cut(s) 182
Hin1I GRCGYC 1 cut(s) 1023
Hin1II CATG 9 cut(s) 146, 172, 186, 518, 593, 662, 745, 885, 1083
Hin6I GCGC 1 cut(s) 180
HinP1I GCGC 1 cut(s) 180
HincII GTYRAC 1 cut(s) 1108
HindII GTYRAC 1 cut(s) 1108
HindIII AAGCTT 2 cut(s) 1688, 1720
HinfI GANTC 8 cut(s) 698, 806, 890, 925, 1076, 1382, 1492, 1501
HpaI GTTAAC 1 cut(s) 1108
HpaII CCGG 4 cut(s) 310, 869, 1260, 1726
HphI GGTGA 3 cut(s) 1103, 1588, 1678
Hpy166II GTNNAC 4 cut(s) 271, 665, 1036, 1108
Hpy188III TCNNGA 9 cut(s) 35, 120, 276, 410, 905, 972, 1188, 1386, 1605
Hpy8I GTNNAC 4 cut(s) 271, 665, 1036, 1108
HpyAV CCTTC 3 cut(s) 124, 296, 1715
HpyCH4III ACNGT 4 cut(s) 440, 575, 1146, 1672
HpyCH4IV ACGT 3 cut(s) 1071, 1158, 1578
HpyF10VI GCNNNNNNNGC 2 cut(s) 908, 1261
HpyF3I CTNAG 6 cut(s) 225, 754, 929, 1227, 1537, 1603
HpySE526I ACGT 3 cut(s) 1071, 1158, 1578
Hsp92I GRCGYC 1 cut(s) 1023
Hsp92II CATG 9 cut(s) 146, 172, 186, 518, 593, 662, 745, 885, 1083
HspAI GCGC 1 cut(s) 180
Ksp22I TGATCA 1 cut(s) 624
KspAI GTTAAC 1 cut(s) 1108
Kzo9I GATC 9 cut(s) 328, 392, 412, 511, 624, 654, 1357, 1396, 1477
LmnI GCTCC 4 cut(s) 8, 234, 1179, 1367
Lsp1109I GCAGC 4 cut(s) 115, 865, 1334, 1646
LweI GCATC 9 cut(s) 269, 352, 724, 822, 854, 898, 1135, 1282, 1444
MaeI CTAG 5 cut(s) 18, 57, 609, 1031, 1427
MaeII ACGT 3 cut(s) 1071, 1158, 1578
MaeIII GTNAC 5 cut(s) 430, 799, 871, 1091, 1666
MalI GATC 9 cut(s) 330, 394, 414, 513, 626, 656, 1359, 1398, 1479
MboI GATC 9 cut(s) 328, 392, 412, 511, 624, 654, 1357, 1396, 1477
MboII GAAGA 8 cut(s) 34, 56, 84, 579, 668, 824, 839, 1455
MflI RGATCY 4 cut(s) 328, 654, 1357, 1477
MhlI GDGCHC 4 cut(s) 1038, 1176, 1372, 1557
MlyI GAGTC 3 cut(s) 707, 884, 1486
MmeI TCCRAC 2 cut(s) 612, 1141
MroXI GAANNNNTTC 2 cut(s) 76, 574
MslI CAYNNNNRTG 2 cut(s) 36, 531
MspCI CTTAAG 3 cut(s) 1121, 1409, 1628
MspI CCGG 4 cut(s) 310, 869, 1260, 1726
MspR9I CCNGG 6 cut(s) 311, 651, 869, 1139, 1261, 1355
MvaI CCWGG 3 cut(s) 651, 1139, 1355
MwoI GCNNNNNNNGC 2 cut(s) 908, 1261
NciI CCSGG 3 cut(s) 311, 869, 1261
NcoI CCATGG 1 cut(s) 658
NdeII GATC 9 cut(s) 328, 392, 412, 511, 624, 654, 1357, 1396, 1477
NlaIII CATG 9 cut(s) 146, 172, 186, 518, 593, 662, 745, 885, 1083
NlaIV GGNNCC 3 cut(s) 656, 1175, 1424
NmuCI GTSAC 2 cut(s) 1091, 1666
NsbI TGCGCA 1 cut(s) 181
NspI RCATGY 1 cut(s) 885
OliI CACNNNNGTG 1 cut(s) 531
PasI CCCWGGG 1 cut(s) 650
PdmI GAANNNNTTC 2 cut(s) 76, 574
PfeI GAWTC 5 cut(s) 806, 925, 1076, 1382, 1501
PflFI GACNNNGTC 1 cut(s) 1611
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 4 cut(s) 130, 880, 1324, 1661
PleI GAGTC 3 cut(s) 706, 884, 1486
PpsI GAGTC 3 cut(s) 706, 884, 1486
PpuMI RGGWCCY 1 cut(s) 1422
PshAI GACNNNNGTC 1 cut(s) 1026
PshBI ATTAAT 1 cut(s) 258
Psp124BI GAGCTC 1 cut(s) 1372
Psp1406I AACGTT 1 cut(s) 1578
Psp5II RGGWCCY 1 cut(s) 1422
Psp6I CCWGG 3 cut(s) 649, 1137, 1353
PspGI CCWGG 3 cut(s) 649, 1137, 1353
PspN4I GGNNCC 3 cut(s) 656, 1175, 1424
PspPI GGNCC 1 cut(s) 1422
PspPPI RGGWCCY 1 cut(s) 1422
PstI CTGCAG 2 cut(s) 133, 794
PstNI CAGNNNCTG 5 cut(s) 737, 1154, 1313, 1385, 1457
PsuI RGATCY 4 cut(s) 328, 654, 1357, 1477
PsyI GACNNNGTC 1 cut(s) 1611
RsaI GTAC 2 cut(s) 272, 993
RsaNI GTAC 2 cut(s) 271, 992
RseI CAYNNNNRTG 2 cut(s) 36, 531
SacI GAGCTC 1 cut(s) 1372
SatI GCNGC 4 cut(s) 129, 879, 1323, 1660
Sau3AI GATC 9 cut(s) 328, 392, 412, 511, 624, 654, 1357, 1396, 1477
Sau96I GGNCC 1 cut(s) 1422
ScaI AGTACT 1 cut(s) 993
SchI GAGTC 3 cut(s) 707, 884, 1486
ScrFI CCNGG 6 cut(s) 311, 651, 869, 1139, 1261, 1355
SduI GDGCHC 4 cut(s) 1038, 1176, 1372, 1557
SfaNI GCATC 9 cut(s) 269, 352, 724, 822, 854, 898, 1135, 1282, 1444
SfcI CTRYAG 2 cut(s) 129, 790
SinI GGWCC 1 cut(s) 1422
SmiMI CAYNNNNRTG 2 cut(s) 36, 531
SmlI CTYRAG 4 cut(s) 1121, 1409, 1417, 1628
SmoI CTYRAG 4 cut(s) 1121, 1409, 1417, 1628
SsiI CCGC 1 cut(s) 1177
SspI AATATT 1 cut(s) 1471
SspMI CTAG 5 cut(s) 18, 57, 609, 1031, 1427
SstI GAGCTC 1 cut(s) 1372
StyD4I CCNGG 6 cut(s) 309, 649, 867, 1137, 1259, 1353
StyI CCWWGG 1 cut(s) 658
TaaI ACNGT 4 cut(s) 440, 575, 1146, 1672
TaiI ACGT 3 cut(s) 1074, 1161, 1581
TaqI TCGA 3 cut(s) 34, 121, 973
TatI WGTACW 2 cut(s) 270, 991
TfiI GAWTC 5 cut(s) 806, 925, 1076, 1382, 1501
TscAI CASTG 2 cut(s) 445, 1231
TseFI GTSAC 2 cut(s) 1091, 1666
TseI GCWGC 4 cut(s) 128, 878, 1322, 1659
Tsp45I GTSAC 2 cut(s) 1091, 1666
TspDTI ATGAA 6 cut(s) 57, 662, 758, 1026, 1068, 1473
TspGWI ACGGA 1 cut(s) 1541
TspRI CASTG 2 cut(s) 445, 1231
Tth111I GACNNNGTC 1 cut(s) 1611
Vha464I CTTAAG 3 cut(s) 1121, 1409, 1628
VneI GTGCAC 1 cut(s) 1034
VpaK11BI GGWCC 1 cut(s) 1422
VspI ATTAAT 1 cut(s) 258
XagI CCTNNNNNAGG 1 cut(s) 753
XapI RAATTY 7 cut(s) 553, 691, 766, 783, 1054, 1585, 1633
XceI RCATGY 1 cut(s) 885
XmnI GAANNNNTTC 2 cut(s) 76, 574
XspI CTAG 5 cut(s) 18, 57, 609, 1031, 1427
ZrmI AGTACT 1 cut(s) 993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.