Rh2BG375300

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000551
Physical Location & Seq
Reverse (-)
53004316 .. 53013952
9637 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG375300.1

Sequence Viewer

Length: 1737 bp
ATGGGGGGAGCTTGTTCTAGGAAGAGAAACCATAGAGATGATGAAGATAATTTTCCTAGAGGGATTTCCAGAAGATATTCCAAAAGTGGGAGTTCAAAGTGGTTGGCAACCTCCTTCTCTCGACCTGCTATAGATATTCAACATGACAAAGGGCAATGCCCATCCCTCATGGACTTGTGCGTACGGAAAATACGTGAGGACATTAATAAATATAGCACATTCTCTATGCTCCCAAGAGATATTAGTCAACAGATCATTAATGAGTTGGTGTACTCTGGATGCCTAACTGATGTTTCTTTTGAAGCTTTCCGGGATTGTGCTTTGCAGGATCTTTACTTGGGAGAATACCCTAATGTAAATGATACTTGGATGGATGTCATATCCTCCCAAGGGTCATCTTTGCTCTCACTAGATCTCTCTGGTTCCGATGTTACTGACAGCGGGTTAATTTATCTCAAAGATTGCACAAATCTCCAAGCGTTAAATTTTAATGATTGTGATGAGATATCAGATCAGGGGCTGGAACACATAAGTGGTCTATCTAACTTGACAAATTTGAGTTTTAGAAGAAATGGTGCAATTACTTCTCATGGAATGAGTGCCTTTGCTAATTTATTTGGCTTGATCAAGTTGGACTTGGAGAGATGCCCAGGGATCCATGGTGGACTTGTTCATCTTCAAGGTTTAACAAAATTAGAGTCTCTTAATATCAAATGGTGCAACTCCATAGCAGATGATGACATGAAGCCTCTCTCAGGGCTTACAAATTTGAAAAGCATACAAATTGCCTGCAGTAAGGTTACTGATTCTGGCATTACTTATATGAAAGGTCTTCACAATCTTTCTCTTCTGAACTTGGAGGGATGCCTGGTAACTGCTGCATGTTTGGACTCTCTTTCAGCTCTTGATGCCCTGCTATATCTGAATCTGAGCCGATGTCATCTGACTGATGAAGGATGTGAGAAGTTTTCTCGATTTGGAAACTTAAAAGTACTAAACTTGGGGTTCAATGACATCACGGATGCCTGTCTAGTGCACTTAAGAGGTTTGACAAATTTGGAGAGTCTGAACCTGGATTCATGTAGAATTGGTGATGATGGGCTGGTTAACTTGACAGGCCTTAAGCATCTGAAATGCCTGGAATTGTCAGATACTGAAGTTGGAAGCAATGGGCTCCGCCATTTGTCAGGATTGGTTAAACTAGAAAGTATAAATCTGTCTTTCACTGTGGTTACTGACAGTGGTTTAAGAAAGCTGTCCGGGCTCTCATCTCTTAAATCGCTTAATTTGGATGCCCGGCAAATAACAGATACTGGACTTGCAGCTCTTACAAGTTTGACCGGATTGACGCACCTGGATCTGTTTGGAGCCCGAATTACAGATTCTGGAACAAACTATCTACGAAGCTTTAAAAACTTGAGGTCCCTAGAAATATGCGGTGGAGGATTGACAGATGCTGGAGTAAAGAATATTAAAGATCTTTCATCCTTGACCCTATTGAATCTATCACAAAACTGCAACCTAACAGATAAAACCTTGGAGTTGATTTCTGGGCTCACAGGATTGGTCTCTTTAAACGTTTCAAATTCTCGCATAACCCACTCAGGACTGCGTCATTTGAAACTACTTAAGAATTTGAAGTCTCTGACTTTGGAAGCCTGCAAGGTGACTGCAAATGACATTAGGAAGCTTCAATTGACTGACCTTCCAAATCTGGTAAGCTTCCGGCCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_5 LRR_6 LRR_8

Protein Analysis

578

Amino Acids

63.07

Weight (kDa)

6.18

Isoelectric Point (pI)

35.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 150 - 204 1.3e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
LRR_14 PF23598 274 - 505 1.2e-09 Leucine-rich repeat region
DUF7885 PF25372 290 - 371 9.4e-07 Leucine Rich Repeat Domain of unknown function (DUF7885)
LRR_8 PF13855 307 - 363 2.5e-06 Leucine rich repeat
LRR_8 PF13855 472 - 532 2.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15740
fragaria_vesca FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_7g04581
malus_domestica MD02G1018400.v1.1 MD15G1162400.v1.1 MD17G1217000.v1.1
prunus_persica Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1
pyrus_communis pycom15g14600 pycom17g22160
rosa_chinensis RchiOBHm_Chr1g0325881 RchiOBHm_Chr2g0087081 RchiOBHm_Chr2g0134401 RchiOBHm_Chr6g0252571
rosa_laevigata RLG00000015828 RLG00000019390
rosa_multiflora Rmu_co8182664.1_g000001 Rmu_sc0005550.1_g000003 Rmu_sc0013657.1_g000009 Rmu_ssc0000064.1_g000031
rosa_roxburghii Rroxscaffold_2G00110270 Rroxscaffold_3G00253750 Rroxscaffold_7G00171870
rosa_rugosa Rorug01G0472200 Rorug01G0472300 Rorug02G0316800 Rorug05G0039000 Rorug05G0039100 Rorug06G0116400
rosa_samantha Rh1DG076800 Rh2AG025600 Rh2AG369200 Rh2BG025300 Rh2BG375300 Rh2CG025900 Rh2CG352900 Rh2CG433900 Rh2DG025800 Rh2DG392400 Rh3DG227300 Rh7BG234800 Rh7CG498200
rosa_wichuraiana Rw1G005860 Rw2G002030 Rw2G030080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 133
AciI CCGC 3 cut(s) 441, 1177, 1437
AclI AACGTT 1 cut(s) 1578
AclWI GGATC 4 cut(s) 336, 649, 662, 1365
AcsI RAATTY 6 cut(s) 484, 553, 766, 1054, 1585, 1633
AcuI CTGAAG 1 cut(s) 1176
AfaI GTAC 3 cut(s) 183, 272, 993
AfiI CCNNNNNNNGG 3 cut(s) 87, 390, 755
AflII CTTAAG 3 cut(s) 1039, 1121, 1628
AjnI CCWGG 5 cut(s) 649, 867, 1071, 1137, 1353
AleI CACNNNNGTG 1 cut(s) 531
AluBI AGCT 8 cut(s) 11, 305, 902, 1255, 1325, 1407, 1690, 1722
AluI AGCT 8 cut(s) 11, 305, 902, 1255, 1325, 1407, 1690, 1722
Alw21I GWGCWC 1 cut(s) 1038
Alw26I GTCTC 3 cut(s) 705, 1573, 1647
Alw44I GTGCAC 1 cut(s) 1034
AlwI GGATC 4 cut(s) 336, 649, 662, 1365
AlwNI CAGNNNCTG 5 cut(s) 520, 1154, 1313, 1385, 1457
AoxI GGCC 2 cut(s) 1117, 1727
ApaLI GTGCAC 1 cut(s) 1034
ApeKI GCWGC 2 cut(s) 878, 1322
ApoI RAATTY 6 cut(s) 484, 553, 766, 1054, 1585, 1633
ArsI GACNNNNNNTTYG 2 cut(s) 683, 715
AseI ATTAAT 2 cut(s) 204, 258
Asp700I GAANNNNTTC 1 cut(s) 76
AspS9I GGNCC 1 cut(s) 1422
AsuC2I CCSGG 3 cut(s) 311, 1261, 1297
AsuHPI GGTGA 2 cut(s) 1103, 1678
AvaII GGWCC 1 cut(s) 1422
BaeGI GKGCMC 1 cut(s) 1038
BaeI ACNNNNGTAYC 2 cut(s) 1143, 1176
BamHI GGATCC 1 cut(s) 654
BanII GRGCYC 4 cut(s) 1176, 1266, 1372, 1557
BbsI GAAGAC 1 cut(s) 824
Bbv12I GWGCWC 1 cut(s) 1038
BbvI GCAGC 2 cut(s) 865, 1334
BccI CCATC 3 cut(s) 169, 364, 1091
BciT130I CCWGG 5 cut(s) 651, 869, 1073, 1139, 1355
BclI TGATCA 1 cut(s) 624
BcnI CCSGG 3 cut(s) 311, 1261, 1297
BcoDI GTCTC 3 cut(s) 705, 1573, 1647
BfaI CTAG 6 cut(s) 18, 57, 410, 1031, 1202, 1427
BfmI CTRYAG 2 cut(s) 129, 790
BfrI CTTAAG 3 cut(s) 1039, 1121, 1628
BfuAI ACCTGC 1 cut(s) 133
BglII AGATCT 2 cut(s) 412, 1477
BisI GCNGC 2 cut(s) 879, 1323
BlsI GCNGC 2 cut(s) 880, 1324
BmcAI AGTACT 1 cut(s) 993
Bme1390I CCNGG 8 cut(s) 311, 651, 869, 1073, 1139, 1261, 1297, 1355
Bme18I GGWCC 1 cut(s) 1422
BmgT120I GGNCC 1 cut(s) 1422
BmiI GGNNCC 5 cut(s) 424, 656, 1175, 1369, 1424
BmrFI CCNGG 8 cut(s) 311, 651, 869, 1073, 1139, 1261, 1297, 1355
BmsI GCATC 8 cut(s) 269, 635, 854, 898, 1012, 1135, 1282, 1444
BpiI GAAGAC 1 cut(s) 824
BpmI CTGGAG 1 cut(s) 1479
BpuEI CTTGAG 1 cut(s) 1438
BpuMI CCSGG 3 cut(s) 311, 1261, 1297
BsaAI YACGTR 1 cut(s) 194
BsaI GGTCTC 1 cut(s) 1573
BsaJI CCNNGG 5 cut(s) 388, 649, 650, 658, 1536
BsaWI WCCGGW 1 cut(s) 1340
Bsc4I CCNNNNNNNGG 3 cut(s) 87, 390, 755
Bse1I ACTGG 1 cut(s) 1318
Bse3DI GCAATG 2 cut(s) 161, 1174
BseBI CCWGG 5 cut(s) 651, 869, 1073, 1139, 1355
BseDI CCNNGG 5 cut(s) 388, 649, 650, 658, 1536
BseGI GGATG 9 cut(s) 161, 284, 375, 379, 869, 962, 1027, 1297, 1484
BseLI CCNNNNNNNGG 3 cut(s) 87, 390, 755
BseMI GCAATG 2 cut(s) 161, 1174
BseMII CTCAG 3 cut(s) 768, 920, 1617
BseNI ACTGG 1 cut(s) 1318
BseSI GKGCMC 1 cut(s) 1038
BseXI GCAGC 2 cut(s) 865, 1334
BshFI GGCC 2 cut(s) 1119, 1729
BsiHKAI GWGCWC 1 cut(s) 1038
BsiSI CCGG 5 cut(s) 310, 1260, 1297, 1341, 1726
BsiWI CGTACG 1 cut(s) 181
BslFI GGGAC 1 cut(s) 1408
BslI CCNNNNNNNGG 3 cut(s) 87, 390, 755
BsmAI GTCTC 3 cut(s) 705, 1573, 1647
BsmFI GGGAC 1 cut(s) 1408
BsnI GGCC 2 cut(s) 1119, 1729
Bso31I GGTCTC 1 cut(s) 1573
Bsp1286I GDGCHC 5 cut(s) 1038, 1176, 1266, 1372, 1557
Bsp143I GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477
Bsp19I CCATGG 1 cut(s) 658
BspACI CCGC 3 cut(s) 441, 1177, 1437
BspANI GGCC 2 cut(s) 1119, 1729
BspCNI CTCAG 3 cut(s) 767, 921, 1616
BspLI GGNNCC 5 cut(s) 424, 656, 1175, 1369, 1424
BspMAI CTGCAG 1 cut(s) 794
BspMI ACCTGC 1 cut(s) 133
BspPI GGATC 4 cut(s) 336, 649, 662, 1365
BspTI CTTAAG 3 cut(s) 1039, 1121, 1628
BspTNI GGTCTC 1 cut(s) 1573
BsrDI GCAATG 2 cut(s) 161, 1174
BsrI ACTGG 1 cut(s) 1318
BssECI CCNNGG 5 cut(s) 388, 649, 650, 658, 1536
BssMI GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477
BssT1I CCWWGG 3 cut(s) 388, 658, 1536
Bst2UI CCWGG 5 cut(s) 651, 869, 1073, 1139, 1355
Bst4CI ACNGT 2 cut(s) 1228, 1241
Bst6I CTCTTC 2 cut(s) 17, 852
BstAFI CTTAAG 3 cut(s) 1039, 1121, 1628
BstBAI YACGTR 1 cut(s) 194
BstC8I GCNNGC 2 cut(s) 790, 1660
BstDEI CTNAG 3 cut(s) 754, 929, 1603
BstDSI CCRYGG 1 cut(s) 658
BstENI CCTNNNNNAGG 1 cut(s) 753
BstF5I GGATG 9 cut(s) 161, 284, 375, 379, 869, 962, 1027, 1297, 1484
BstKTI GATC 8 cut(s) 255, 331, 415, 514, 627, 657, 1360, 1480
BstMAI GTCTC 3 cut(s) 705, 1573, 1647
BstMBI GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477
BstMWI GCNNNNNNNGC 2 cut(s) 908, 1261
BstNI CCWGG 5 cut(s) 651, 869, 1073, 1139, 1355
BstNSI RCATGY 1 cut(s) 885
BstSCI CCNGG 8 cut(s) 309, 649, 867, 1071, 1137, 1259, 1295, 1353
BstSFI CTRYAG 2 cut(s) 129, 790
BstSLI GKGCMC 1 cut(s) 1038
BstV1I GCAGC 2 cut(s) 865, 1334
BstV2I GAAGAC 1 cut(s) 824
BstX2I RGATCY 5 cut(s) 328, 412, 654, 1357, 1477
BstYI RGATCY 5 cut(s) 328, 412, 654, 1357, 1477
BsuRI GGCC 2 cut(s) 1119, 1729
BtgI CCRYGG 1 cut(s) 658
BtsCI GGATG 9 cut(s) 161, 284, 375, 379, 869, 962, 1027, 1297, 1484
BtsIMutI CAGTG 2 cut(s) 1224, 1246
BveI ACCTGC 1 cut(s) 133
Cac8I GCNNGC 2 cut(s) 790, 1660
CaiI CAGNNNCTG 5 cut(s) 520, 1154, 1313, 1385, 1457
Cfr13I GGNCC 1 cut(s) 1422
CseI GACGC 2 cut(s) 1357, 1601
Csp6I GTAC 3 cut(s) 182, 271, 992
CviAII CATG 7 cut(s) 143, 169, 590, 659, 742, 882, 1080
CviQI GTAC 3 cut(s) 182, 271, 992
DdeI CTNAG 3 cut(s) 754, 929, 1603
DpnI GATC 8 cut(s) 254, 330, 414, 513, 626, 656, 1359, 1479
DpnII GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477
DraI TTTAAA 2 cut(s) 1411, 1575
Eam1104I CTCTTC 2 cut(s) 17, 852
EarI CTCTTC 2 cut(s) 17, 852
EciI GGCGGA 1 cut(s) 1166
Eco130I CCWWGG 3 cut(s) 388, 658, 1536
Eco147I AGGCCT 1 cut(s) 1119
Eco24I GRGCYC 4 cut(s) 1176, 1266, 1372, 1557
Eco31I GGTCTC 1 cut(s) 1573
Eco32I GATATC 1 cut(s) 507
Eco47I GGWCC 1 cut(s) 1422
Eco57I CTGAAG 1 cut(s) 1176
EcoNI CCTNNNNNAGG 1 cut(s) 753
EcoO109I RGGNCCY 1 cut(s) 1422
EcoRII CCWGG 5 cut(s) 649, 867, 1071, 1137, 1353
EcoRV GATATC 1 cut(s) 507
EcoT14I CCWWGG 3 cut(s) 388, 658, 1536
EcoT38I GRGCYC 4 cut(s) 1176, 1266, 1372, 1557
ErhI CCWWGG 3 cut(s) 388, 658, 1536
FaeI CATG 7 cut(s) 146, 172, 593, 662, 745, 885, 1083
FalI AAGNNNNNCTT 2 cut(s) 620, 652
FaqI GGGAC 1 cut(s) 1408
FatI CATG 7 cut(s) 142, 168, 589, 658, 741, 881, 1079
FauI CCCGC 1 cut(s) 434
FbaI TGATCA 1 cut(s) 624
Fnu4HI GCNGC 2 cut(s) 879, 1323
FokI GGATG 9 cut(s) 148, 291, 382, 386, 876, 969, 1034, 1304, 1471
FriOI GRGCYC 4 cut(s) 1176, 1266, 1372, 1557
Fsp4HI GCNGC 2 cut(s) 879, 1323
FspBI CTAG 6 cut(s) 18, 57, 410, 1031, 1202, 1427
GluI GCNGC 2 cut(s) 879, 1323
GsuI CTGGAG 1 cut(s) 1479
HaeIII GGCC 2 cut(s) 1119, 1729
HapII CCGG 5 cut(s) 310, 1260, 1297, 1341, 1726
HgaI GACGC 2 cut(s) 1357, 1601
Hin1II CATG 7 cut(s) 146, 172, 593, 662, 745, 885, 1083
HincII GTYRAC 2 cut(s) 248, 1108
HindII GTYRAC 2 cut(s) 248, 1108
HindIII AAGCTT 4 cut(s) 303, 1405, 1688, 1720
HinfI GANTC 8 cut(s) 698, 806, 890, 925, 1063, 1076, 1382, 1501
HpaI GTTAAC 1 cut(s) 1108
HpaII CCGG 5 cut(s) 310, 1260, 1297, 1341, 1726
HphI GGTGA 2 cut(s) 1103, 1678
Hpy166II GTNNAC 5 cut(s) 248, 271, 665, 1036, 1108
Hpy188III TCNNGA 8 cut(s) 69, 120, 276, 905, 972, 1188, 1386, 1605
Hpy8I GTNNAC 5 cut(s) 248, 271, 665, 1036, 1108
HpyAV CCTTC 3 cut(s) 124, 947, 1715
HpyCH4III ACNGT 2 cut(s) 1228, 1241
HpyCH4IV ACGT 2 cut(s) 193, 1578
HpyF10VI GCNNNNNNNGC 2 cut(s) 908, 1261
HpyF3I CTNAG 3 cut(s) 754, 929, 1603
HpySE526I ACGT 2 cut(s) 193, 1578
Hsp92II CATG 7 cut(s) 146, 172, 593, 662, 745, 885, 1083
Ksp22I TGATCA 1 cut(s) 624
KspAI GTTAAC 1 cut(s) 1108
Kzo9I GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477
LmnI GCTCC 4 cut(s) 8, 234, 1179, 1367
Lsp1109I GCAGC 2 cut(s) 865, 1334
LweI GCATC 8 cut(s) 269, 635, 854, 898, 1012, 1135, 1282, 1444
MaeI CTAG 6 cut(s) 18, 57, 410, 1031, 1202, 1427
MaeII ACGT 2 cut(s) 193, 1578
MaeIII GTNAC 5 cut(s) 430, 799, 871, 1231, 1666
MalI GATC 8 cut(s) 254, 330, 414, 513, 626, 656, 1359, 1479
MboI GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477
MboII GAAGA 7 cut(s) 34, 56, 84, 579, 668, 824, 839
MfeI CAATTG 1 cut(s) 1694
MflI RGATCY 5 cut(s) 328, 412, 654, 1357, 1477
MhlI GDGCHC 5 cut(s) 1038, 1176, 1266, 1372, 1557
MlyI GAGTC 3 cut(s) 707, 884, 1072
MmeI TCCRAC 2 cut(s) 612, 1141
MroXI GAANNNNTTC 1 cut(s) 76
MslI CAYNNNNRTG 2 cut(s) 36, 531
MspA1I CMGCKG 1 cut(s) 441
MspCI CTTAAG 3 cut(s) 1039, 1121, 1628
MspI CCGG 5 cut(s) 310, 1260, 1297, 1341, 1726
MspR9I CCNGG 8 cut(s) 311, 651, 869, 1073, 1139, 1261, 1297, 1355
MunI CAATTG 1 cut(s) 1694
MvaI CCWGG 5 cut(s) 651, 869, 1073, 1139, 1355
MwoI GCNNNNNNNGC 2 cut(s) 908, 1261
NciI CCSGG 3 cut(s) 311, 1261, 1297
NcoI CCATGG 1 cut(s) 658
NdeII GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477
NlaIII CATG 7 cut(s) 146, 172, 593, 662, 745, 885, 1083
NlaIV GGNNCC 5 cut(s) 424, 656, 1175, 1369, 1424
NmuCI GTSAC 1 cut(s) 1666
NspI RCATGY 1 cut(s) 885
OliI CACNNNNGTG 1 cut(s) 531
PasI CCCWGGG 1 cut(s) 650
PceI AGGCCT 1 cut(s) 1119
PcsI WCGNNNNNNNCGW 1 cut(s) 190
PdmI GAANNNNTTC 1 cut(s) 76
PfeI GAWTC 5 cut(s) 806, 925, 1076, 1382, 1501
Pfl23II CGTACG 1 cut(s) 181
PflFI GACNNNGTC 1 cut(s) 1611
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 2 cut(s) 880, 1324
PleI GAGTC 3 cut(s) 706, 884, 1071
PpsI GAGTC 3 cut(s) 706, 884, 1071
Ppu21I YACGTR 1 cut(s) 194
PpuMI RGGWCCY 1 cut(s) 1422
PshBI ATTAAT 2 cut(s) 204, 258
Psp1406I AACGTT 1 cut(s) 1578
Psp5II RGGWCCY 1 cut(s) 1422
Psp6I CCWGG 5 cut(s) 649, 867, 1071, 1137, 1353
PspGI CCWGG 5 cut(s) 649, 867, 1071, 1137, 1353
PspLI CGTACG 1 cut(s) 181
PspN4I GGNNCC 5 cut(s) 424, 656, 1175, 1369, 1424
PspPI GGNCC 1 cut(s) 1422
PspPPI RGGWCCY 1 cut(s) 1422
PstI CTGCAG 1 cut(s) 794
PstNI CAGNNNCTG 5 cut(s) 520, 1154, 1313, 1385, 1457
PsuI RGATCY 5 cut(s) 328, 412, 654, 1357, 1477
PsyI GACNNNGTC 1 cut(s) 1611
RsaI GTAC 3 cut(s) 183, 272, 993
RsaNI GTAC 3 cut(s) 182, 271, 992
RseI CAYNNNNRTG 2 cut(s) 36, 531
SatI GCNGC 2 cut(s) 879, 1323
Sau3AI GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477
Sau96I GGNCC 1 cut(s) 1422
ScaI AGTACT 1 cut(s) 993
SchI GAGTC 3 cut(s) 707, 884, 1072
ScrFI CCNGG 8 cut(s) 311, 651, 869, 1073, 1139, 1261, 1297, 1355
SduI GDGCHC 5 cut(s) 1038, 1176, 1266, 1372, 1557
SfaNI GCATC 8 cut(s) 269, 635, 854, 898, 1012, 1135, 1282, 1444
SfcI CTRYAG 2 cut(s) 129, 790
SinI GGWCC 1 cut(s) 1422
SmiMI CAYNNNNRTG 2 cut(s) 36, 531
SmlI CTYRAG 4 cut(s) 1039, 1121, 1417, 1628
SmoI CTYRAG 4 cut(s) 1039, 1121, 1417, 1628
SseBI AGGCCT 1 cut(s) 1119
SsiI CCGC 3 cut(s) 441, 1177, 1437
SspI AATATT 1 cut(s) 1471
SspMI CTAG 6 cut(s) 18, 57, 410, 1031, 1202, 1427
StuI AGGCCT 1 cut(s) 1119
StyD4I CCNGG 8 cut(s) 309, 649, 867, 1071, 1137, 1259, 1295, 1353
StyI CCWWGG 3 cut(s) 388, 658, 1536
TaaI ACNGT 2 cut(s) 1228, 1241
TaiI ACGT 2 cut(s) 196, 1581
TaqI TCGA 2 cut(s) 121, 973
TatI WGTACW 2 cut(s) 270, 991
TfiI GAWTC 5 cut(s) 806, 925, 1076, 1382, 1501
TscAI CASTG 2 cut(s) 1231, 1246
TseFI GTSAC 1 cut(s) 1666
TseI GCWGC 2 cut(s) 878, 1322
Tsp45I GTSAC 1 cut(s) 1666
TspDTI ATGAA 7 cut(s) 57, 662, 758, 839, 966, 1068, 1473
TspGWI ACGGA 2 cut(s) 199, 1034
TspRI CASTG 2 cut(s) 1231, 1246
Tth111I GACNNNGTC 1 cut(s) 1611
Vha464I CTTAAG 3 cut(s) 1039, 1121, 1628
VneI GTGCAC 1 cut(s) 1034
VpaK11BI GGWCC 1 cut(s) 1422
VspI ATTAAT 2 cut(s) 204, 258
XagI CCTNNNNNAGG 1 cut(s) 753
XapI RAATTY 6 cut(s) 484, 553, 766, 1054, 1585, 1633
XceI RCATGY 1 cut(s) 885
XmnI GAANNNNTTC 1 cut(s) 76
XspI CTAG 6 cut(s) 18, 57, 410, 1031, 1202, 1427
ZrmI AGTACT 1 cut(s) 993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.