Rmu_ssc0000064.1_g000031

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000064.1
OG0000551
Physical Location & Seq
Forward (+)
198226 .. 208314
10089 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000064.1_g000031.1.cds

Sequence Viewer

Length: 2268 bp
atggggggagcttgttctaggaagagaaaccatagagatgatgaagataattttcctagagggatttccagaagatattccaaaagtgggagttcaaagtggttggcaacctccttctctcgacctgctatagatattcaacatgacaaagggcaatgtccatccctcatggacttgtgcgtacggaaaatacgtgaggacattaataaatatagcacattctctatgctcccaagggatattagtcaacagatcattaatgagttggtgtactctggatgcctaactgatgtttcttttgaagctttccgggattgtgctttgcaggatctttacttgggagaataccctaatgtaaatgatacttggatggatgtgatatcctcccaagggtcatctttgctctcactagatctctctggttccgatgttactgacagcgggttaatttatctcaaagattgcacaaatctccaagcgttaaattttaatgattgtgatgagatatcagatcaggggctggaacacataagtggtctatctaacttgacaaatttgagttttagaagaaatggtgcaattacttctcatggaatgggtgcctttgctaatttatttggcttgatcaagttggacttggagagatgcccagggatccatggtggacttgttcatcttcaaggtttaacaaaattagagtctcttaatatcaaatggtgcaactccatagcagatgctgacatgaagcctctctcagggcttacaaatttgaaaagcatacaaatttcctgcagtaaggttactgattctggcattacttatatgaaaggtcttcacaatctttctcttctgaacttggagggatgcctggtaactgctgcatgtttggactctctttcagctcttgatgccctgctatatctgaatctgagccgatgtcatctgactgatgaaggatgtgagaagttttctcgatttggaaacttaaaagtactaaacttggggttcaatgacatcacggatgcctgtctagtgcacttaaaaggtttgacaaatttggacagtctgaacctggattcatgtagaattggtgatgaagggctggttaacttgacaggccttaagcatctgaaatgcctggaattgtcagatactgaagttggaagcaatgggctccgccatttgtcaggattggttaaattagaaagtataaatctgtctttcactgtggttactgacagtggtttaagaaagctgtccgggctctcatctcttaaatcgcttaatttggatgcccggcaaataacagatactggacttgctgctcttacaagtttgaccggattgacgcacctggatctgtttggagcccgaattacagattctggaacaaactatctacgaagctttaaaaacttgaggtccctagaaatatgcggtggaggattgacagatgctggagtaaagaatattaaagatctttcatccttgaccctattgaatctatcacaaaactgcaacctaacagataaaaccttggagttgatttctgggctcacaggattggtctctttaaacgtttcaaattctcgcatcacccactcaggactgcgtcatttgaaactacttaagaatttgaagtctctgactttggaagcctgcaaggtgactgcaaatgacattaggaagcttcaattgactgaccttccaaatctgctgctgcctgaagacattgtcaatcaaataatagctattcctatcccagtgtatcatactgtggatgagtttgtttggggtccttccccaacaggagtctttactgtcaaaaatattgttagtagacacttctcagatgttgatactttaagtcattgcttcttagttgcctggtctatttggaatactcagaataaagtgatttttgagcagttgaccccttcacctagtaaaactgtgtttggagcattcaatctggggtttaactactgcaaggctaaccctaagcttttctgtcctaaagtttcaaagttcttccatgttaaatggcaaccccctgatcattctcaagtgaagcttaattttgatggctcggtcggacatggtgtagctaccattggatttctcctcagaaattctgatggcaatccgctgtttgctacttgtcaaaatttaggaatcactaatgcccttgttgctgaagctacagcgttaagagatggactgcatgcatacgaccttattgcagcagtatcaacgtgtcattgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_5 LRR_6 LRR_8

Protein Analysis

755

Amino Acids

82.41

Weight (kDa)

6.42

Isoelectric Point (pI)

31.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15740
fragaria_vesca FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_7g04581
malus_domestica MD02G1018400.v1.1 MD15G1162400.v1.1 MD17G1217000.v1.1
prunus_persica Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1
pyrus_communis pycom15g14600 pycom17g22160
rosa_chinensis RchiOBHm_Chr1g0325881 RchiOBHm_Chr2g0087081 RchiOBHm_Chr2g0134401 RchiOBHm_Chr6g0252571
rosa_laevigata RLG00000015828 RLG00000019390
rosa_multiflora Rmu_co8182664.1_g000001 Rmu_sc0005550.1_g000003 Rmu_sc0013657.1_g000009 Rmu_ssc0000064.1_g000031
rosa_roxburghii Rroxscaffold_2G00110270 Rroxscaffold_3G00253750 Rroxscaffold_7G00171870
rosa_rugosa Rorug01G0472200 Rorug01G0472300 Rorug02G0316800 Rorug05G0039000 Rorug05G0039100 Rorug06G0116400
rosa_samantha Rh1DG076800 Rh2AG025600 Rh2AG369200 Rh2BG025300 Rh2BG375300 Rh2CG025900 Rh2CG352900 Rh2CG433900 Rh2DG025800 Rh2DG392400 Rh3DG227300 Rh7BG234800 Rh7CG498200
rosa_wichuraiana Rw1G005860 Rw2G002030 Rw2G030080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 133
AccB1I GGYRCC 1 cut(s) 599
AccI GTMKAC 1 cut(s) 1840
AciI CCGC 4 cut(s) 441, 1177, 1437, 2147
AclI AACGTT 1 cut(s) 1578
AclWI GGATC 4 cut(s) 336, 649, 662, 1365
AcsI RAATTY 9 cut(s) 484, 553, 766, 783, 1054, 1585, 1633, 2131, 2167
AcuI CTGAAG 3 cut(s) 1176, 1746, 2217
AfaI GTAC 3 cut(s) 183, 272, 993
AfiI CCNNNNNNNGG 3 cut(s) 87, 390, 755
AflII CTTAAG 2 cut(s) 1121, 1628
AflIII ACRYGT 1 cut(s) 2255
AjnI CCWGG 6 cut(s) 649, 867, 1071, 1137, 1353, 1886
AleI CACNNNNGTG 1 cut(s) 531
Alw21I GWGCWC 1 cut(s) 1038
Alw26I GTCTC 3 cut(s) 705, 1573, 1647
Alw44I GTGCAC 1 cut(s) 1034
AlwI GGATC 4 cut(s) 336, 649, 662, 1365
AlwNI CAGNNNCTG 6 cut(s) 520, 737, 1154, 1313, 1385, 1457
AoxI GGCC 1 cut(s) 1117
ApaLI GTGCAC 1 cut(s) 1034
ApeKI GCWGC 5 cut(s) 878, 1322, 1717, 1720, 2243
ApoI RAATTY 9 cut(s) 484, 553, 766, 783, 1054, 1585, 1633, 2131, 2167
ArsI GACNNNNNNTTYG 2 cut(s) 683, 715
AseI ATTAAT 2 cut(s) 204, 258
Asp700I GAANNNNTTC 1 cut(s) 76
AspS9I GGNCC 2 cut(s) 1422, 1796
AsuC2I CCSGG 3 cut(s) 311, 1261, 1297
AsuHPI GGTGA 4 cut(s) 1103, 1588, 1678, 1932
AvaII GGWCC 2 cut(s) 1422, 1796
BaeGI GKGCMC 1 cut(s) 1038
BaeI ACNNNNGTAYC 2 cut(s) 1143, 1176
BamHI GGATCC 1 cut(s) 654
BanI GGYRCC 1 cut(s) 599
BanII GRGCYC 4 cut(s) 1176, 1266, 1372, 1557
BbsI GAAGAC 2 cut(s) 824, 1734
Bbv12I GWGCWC 1 cut(s) 1038
BbvI GCAGC 5 cut(s) 865, 1309, 1704, 1707, 2255
BccI CCATC 5 cut(s) 169, 364, 2078, 2132, 2210
BcgI CGANNNNNNTGC 2 cut(s) 2222, 2256
BciT130I CCWGG 6 cut(s) 651, 869, 1073, 1139, 1355, 1888
BclI TGATCA 2 cut(s) 624, 2056
BcnI CCSGG 3 cut(s) 311, 1261, 1297
BcoDI GTCTC 3 cut(s) 705, 1573, 1647
BfaI CTAG 6 cut(s) 18, 57, 410, 1031, 1427, 1944
BfmI CTRYAG 3 cut(s) 129, 790, 2202
BfrI CTTAAG 2 cut(s) 1121, 1628
BfuAI ACCTGC 1 cut(s) 133
BglII AGATCT 2 cut(s) 412, 1477
BisI GCNGC 5 cut(s) 879, 1323, 1718, 1721, 2244
BlsI GCNGC 5 cut(s) 880, 1324, 1719, 1722, 2245
BmcAI AGTACT 1 cut(s) 993
Bme1390I CCNGG 9 cut(s) 311, 651, 869, 1073, 1139, 1261, 1297, 1355, 1888
Bme18I GGWCC 2 cut(s) 1422, 1796
BmgT120I GGNCC 2 cut(s) 1422, 1796
BmiI GGNNCC 7 cut(s) 424, 601, 656, 1175, 1369, 1424, 1797
BmrFI CCNGG 9 cut(s) 311, 651, 869, 1073, 1139, 1261, 1297, 1355, 1888
BmrI ACTGGG 1 cut(s) 1757
BmuI ACTGGG 1 cut(s) 1757
BpiI GAAGAC 2 cut(s) 824, 1734
BpmI CTGGAG 1 cut(s) 1479
Bpu10I CCTNAGC 1 cut(s) 2001
BpuEI CTTGAG 2 cut(s) 1438, 2049
BpuMI CCSGG 3 cut(s) 311, 1261, 1297
BsaAI YACGTR 1 cut(s) 194
BsaBI GATNNNNATC 1 cut(s) 2142
BsaI GGTCTC 1 cut(s) 1573
BsaJI CCNNGG 6 cut(s) 233, 388, 649, 650, 658, 1536
BsaWI WCCGGW 1 cut(s) 1340
Bsc4I CCNNNNNNNGG 3 cut(s) 87, 390, 755
Bse1I ACTGG 2 cut(s) 1318, 1763
Bse3DI GCAATG 3 cut(s) 161, 1174, 1870
Bse8I GATNNNNATC 1 cut(s) 2142
BseBI CCWGG 6 cut(s) 651, 869, 1073, 1139, 1355, 1888
BseDI CCNNGG 6 cut(s) 233, 388, 649, 650, 658, 1536
BseJI GATNNNNATC 1 cut(s) 2142
BseLI CCNNNNNNNGG 3 cut(s) 87, 390, 755
BseMI GCAATG 3 cut(s) 161, 1174, 1870
BseMII CTCAG 6 cut(s) 768, 920, 1617, 1863, 1919, 2140
BseNI ACTGG 2 cut(s) 1318, 1763
BseRI GAGGAG 1 cut(s) 2114
BseSI GKGCMC 1 cut(s) 1038
BseXI GCAGC 5 cut(s) 865, 1309, 1704, 1707, 2255
Bsh1285I CGRYCG 1 cut(s) 2094
BshFI GGCC 1 cut(s) 1119
BshNI GGYRCC 1 cut(s) 599
BsiEI CGRYCG 1 cut(s) 2094
BsiHKAI GWGCWC 1 cut(s) 1038
BsiSI CCGG 4 cut(s) 310, 1260, 1297, 1341
BsiWI CGTACG 1 cut(s) 181
BslFI GGGAC 1 cut(s) 1408
BslI CCNNNNNNNGG 3 cut(s) 87, 390, 755
BsmAI GTCTC 3 cut(s) 705, 1573, 1647
BsmFI GGGAC 1 cut(s) 1408
BsmI GAATGC 1 cut(s) 1964
BsnI GGCC 1 cut(s) 1119
Bso31I GGTCTC 1 cut(s) 1573
Bsp1286I GDGCHC 5 cut(s) 1038, 1176, 1266, 1372, 1557
Bsp143I GATC 9 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477, 2056
Bsp19I CCATGG 1 cut(s) 658
BspACI CCGC 4 cut(s) 441, 1177, 1437, 2147
BspANI GGCC 1 cut(s) 1119
BspCNI CTCAG 6 cut(s) 767, 921, 1616, 1862, 1918, 2139
BspLI GGNNCC 7 cut(s) 424, 601, 656, 1175, 1369, 1424, 1797
BspMAI CTGCAG 1 cut(s) 794
BspMI ACCTGC 1 cut(s) 133
BspPI GGATC 4 cut(s) 336, 649, 662, 1365
BspT107I GGYRCC 1 cut(s) 599
BspTI CTTAAG 2 cut(s) 1121, 1628
BspTNI GGTCTC 1 cut(s) 1573
BsrDI GCAATG 3 cut(s) 161, 1174, 1870
BsrI ACTGG 2 cut(s) 1318, 1763
BssECI CCNNGG 6 cut(s) 233, 388, 649, 650, 658, 1536
BssMI GATC 9 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477, 2056
BssT1I CCWWGG 4 cut(s) 233, 388, 658, 1536
Bst2UI CCWGG 6 cut(s) 651, 869, 1073, 1139, 1355, 1888
Bst4CI ACNGT 6 cut(s) 1064, 1228, 1241, 1777, 1822, 1954
Bst6I CTCTTC 2 cut(s) 17, 852
BstAFI CTTAAG 2 cut(s) 1121, 1628
BstBAI YACGTR 1 cut(s) 194
BstC8I GCNNGC 2 cut(s) 1660, 2226
BstDEI CTNAG 8 cut(s) 754, 929, 1603, 1849, 1879, 1905, 2001, 2126
BstDSI CCRYGG 1 cut(s) 658
BstENI CCTNNNNNAGG 1 cut(s) 753
BstKTI GATC 9 cut(s) 255, 331, 415, 514, 627, 657, 1360, 1480, 2059
BstMAI GTCTC 3 cut(s) 705, 1573, 1647
BstMBI GATC 9 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477, 2056
BstMCI CGRYCG 1 cut(s) 2094
BstMWI GCNNNNNNNGC 3 cut(s) 908, 1261, 2192
BstNI CCWGG 6 cut(s) 651, 869, 1073, 1139, 1355, 1888
BstNSI RCATGY 2 cut(s) 885, 2228
BstSCI CCNGG 9 cut(s) 309, 649, 867, 1071, 1137, 1259, 1295, 1353, 1886
BstSFI CTRYAG 3 cut(s) 129, 790, 2202
BstSLI GKGCMC 1 cut(s) 1038
BstV1I GCAGC 5 cut(s) 865, 1309, 1704, 1707, 2255
BstV2I GAAGAC 2 cut(s) 824, 1734
BstX2I RGATCY 5 cut(s) 328, 412, 654, 1357, 1477
BstYI RGATCY 5 cut(s) 328, 412, 654, 1357, 1477
BsuRI GGCC 1 cut(s) 1119
BtgI CCRYGG 1 cut(s) 658
BtsIMutI CAGTG 3 cut(s) 1224, 1246, 1770
BveI ACCTGC 1 cut(s) 133
Cac8I GCNNGC 2 cut(s) 1660, 2226
CaiI CAGNNNCTG 6 cut(s) 520, 737, 1154, 1313, 1385, 1457
Cfr13I GGNCC 2 cut(s) 1422, 1796
CseI GACGC 2 cut(s) 1357, 1601
Csp6I GTAC 3 cut(s) 182, 271, 992
CviQI GTAC 3 cut(s) 182, 271, 992
DdeI CTNAG 8 cut(s) 754, 929, 1603, 1849, 1879, 1905, 2001, 2126
DpnI GATC 9 cut(s) 254, 330, 414, 513, 626, 656, 1359, 1479, 2058
DpnII GATC 9 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477, 2056
DraI TTTAAA 2 cut(s) 1411, 1575
Eam1104I CTCTTC 2 cut(s) 17, 852
EarI CTCTTC 2 cut(s) 17, 852
EciI GGCGGA 1 cut(s) 1166
Eco130I CCWWGG 4 cut(s) 233, 388, 658, 1536
Eco147I AGGCCT 1 cut(s) 1119
Eco24I GRGCYC 4 cut(s) 1176, 1266, 1372, 1557
Eco31I GGTCTC 1 cut(s) 1573
Eco32I GATATC 2 cut(s) 381, 507
Eco47I GGWCC 2 cut(s) 1422, 1796
Eco57I CTGAAG 3 cut(s) 1176, 1746, 2217
EcoNI CCTNNNNNAGG 1 cut(s) 753
EcoO109I RGGNCCY 2 cut(s) 1422, 1796
EcoRII CCWGG 6 cut(s) 649, 867, 1071, 1137, 1353, 1886
EcoRV GATATC 2 cut(s) 381, 507
EcoT14I CCWWGG 4 cut(s) 233, 388, 658, 1536
EcoT22I ATGCAT 1 cut(s) 2230
EcoT38I GRGCYC 4 cut(s) 1176, 1266, 1372, 1557
ErhI CCWWGG 4 cut(s) 233, 388, 658, 1536
FalI AAGNNNNNCTT 4 cut(s) 620, 652, 2058, 2090
FaqI GGGAC 1 cut(s) 1408
FauI CCCGC 1 cut(s) 434
FbaI TGATCA 2 cut(s) 624, 2056
FblI GTMKAC 1 cut(s) 1840
Fnu4HI GCNGC 5 cut(s) 879, 1323, 1718, 1721, 2244
FriOI GRGCYC 4 cut(s) 1176, 1266, 1372, 1557
Fsp4HI GCNGC 5 cut(s) 879, 1323, 1718, 1721, 2244
FspBI CTAG 6 cut(s) 18, 57, 410, 1031, 1427, 1944
GluI GCNGC 5 cut(s) 879, 1323, 1718, 1721, 2244
GsuI CTGGAG 1 cut(s) 1479
HaeIII GGCC 1 cut(s) 1119
HapII CCGG 4 cut(s) 310, 1260, 1297, 1341
HgaI GACGC 2 cut(s) 1357, 1601
HincII GTYRAC 3 cut(s) 248, 1108, 1932
HindII GTYRAC 3 cut(s) 248, 1108, 1932
HindIII AAGCTT 5 cut(s) 303, 1405, 1688, 2003, 2072
HinfI GANTC 9 cut(s) 698, 806, 890, 925, 1076, 1382, 1501, 1812, 2175
HpaI GTTAAC 1 cut(s) 1108
HpaII CCGG 4 cut(s) 310, 1260, 1297, 1341
HphI GGTGA 4 cut(s) 1103, 1588, 1678, 1932
Hpy166II GTNNAC 7 cut(s) 248, 271, 665, 1036, 1108, 1841, 1932
Hpy188III TCNNGA 8 cut(s) 69, 120, 276, 905, 972, 1188, 1386, 1605
Hpy8I GTNNAC 7 cut(s) 248, 271, 665, 1036, 1108, 1841, 1932
HpyAV CCTTC 6 cut(s) 124, 947, 1091, 1715, 1809, 1947
HpyCH4III ACNGT 6 cut(s) 1064, 1228, 1241, 1777, 1822, 1954
HpyCH4IV ACGT 3 cut(s) 193, 1578, 2255
HpyF10VI GCNNNNNNNGC 3 cut(s) 908, 1261, 2192
HpyF3I CTNAG 8 cut(s) 754, 929, 1603, 1849, 1879, 1905, 2001, 2126
HpySE526I ACGT 3 cut(s) 193, 1578, 2255
Ksp22I TGATCA 2 cut(s) 624, 2056
KspAI GTTAAC 1 cut(s) 1108
Kzo9I GATC 9 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477, 2056
LmnI GCTCC 5 cut(s) 8, 234, 1179, 1367, 1961
Lsp1109I GCAGC 5 cut(s) 865, 1309, 1704, 1707, 2255
MaeI CTAG 6 cut(s) 18, 57, 410, 1031, 1427, 1944
MaeII ACGT 3 cut(s) 193, 1578, 2255
MaeIII GTNAC 5 cut(s) 430, 799, 871, 1231, 1666
MalI GATC 9 cut(s) 254, 330, 414, 513, 626, 656, 1359, 1479, 2058
MboI GATC 9 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477, 2056
MboII GAAGA 9 cut(s) 34, 56, 84, 579, 668, 824, 839, 1739, 2023
MfeI CAATTG 1 cut(s) 1694
MflI RGATCY 5 cut(s) 328, 412, 654, 1357, 1477
MhlI GDGCHC 5 cut(s) 1038, 1176, 1266, 1372, 1557
MlyI GAGTC 3 cut(s) 707, 884, 1821
MmeI TCCRAC 3 cut(s) 612, 1141, 2074
Mph1103I ATGCAT 1 cut(s) 2230
MroXI GAANNNNTTC 1 cut(s) 76
MslI CAYNNNNRTG 2 cut(s) 36, 531
MspA1I CMGCKG 2 cut(s) 441, 2149
MspCI CTTAAG 2 cut(s) 1121, 1628
MspI CCGG 4 cut(s) 310, 1260, 1297, 1341
MspR9I CCNGG 9 cut(s) 311, 651, 869, 1073, 1139, 1261, 1297, 1355, 1888
MunI CAATTG 1 cut(s) 1694
Mva1269I GAATGC 1 cut(s) 1964
MvaI CCWGG 6 cut(s) 651, 869, 1073, 1139, 1355, 1888
MwoI GCNNNNNNNGC 3 cut(s) 908, 1261, 2192
NciI CCSGG 3 cut(s) 311, 1261, 1297
NcoI CCATGG 1 cut(s) 658
NdeII GATC 9 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477, 2056
NlaIV GGNNCC 7 cut(s) 424, 601, 656, 1175, 1369, 1424, 1797
NmuCI GTSAC 1 cut(s) 1666
NsiI ATGCAT 1 cut(s) 2230
NspI RCATGY 2 cut(s) 885, 2228
OliI CACNNNNGTG 1 cut(s) 531
PaeI GCATGC 1 cut(s) 2228
PasI CCCWGGG 1 cut(s) 650
PceI AGGCCT 1 cut(s) 1119
PcsI WCGNNNNNNNCGW 1 cut(s) 190
PctI GAATGC 1 cut(s) 1964
PdmI GAANNNNTTC 1 cut(s) 76
PfeI GAWTC 6 cut(s) 806, 925, 1076, 1382, 1501, 2175
Pfl23II CGTACG 1 cut(s) 181
PflFI GACNNNGTC 2 cut(s) 1611, 1733
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 5 cut(s) 880, 1324, 1719, 1722, 2245
PleI GAGTC 3 cut(s) 706, 884, 1820
PpsI GAGTC 3 cut(s) 706, 884, 1820
Ppu21I YACGTR 1 cut(s) 194
PpuMI RGGWCCY 2 cut(s) 1422, 1796
PshBI ATTAAT 2 cut(s) 204, 258
Psp1406I AACGTT 1 cut(s) 1578
Psp5II RGGWCCY 2 cut(s) 1422, 1796
Psp6I CCWGG 6 cut(s) 649, 867, 1071, 1137, 1353, 1886
PspGI CCWGG 6 cut(s) 649, 867, 1071, 1137, 1353, 1886
PspLI CGTACG 1 cut(s) 181
PspN4I GGNNCC 7 cut(s) 424, 601, 656, 1175, 1369, 1424, 1797
PspPI GGNCC 2 cut(s) 1422, 1796
PspPPI RGGWCCY 2 cut(s) 1422, 1796
PstI CTGCAG 1 cut(s) 794
PstNI CAGNNNCTG 6 cut(s) 520, 737, 1154, 1313, 1385, 1457
PsuI RGATCY 5 cut(s) 328, 412, 654, 1357, 1477
PsyI GACNNNGTC 2 cut(s) 1611, 1733
RsaI GTAC 3 cut(s) 183, 272, 993
RsaNI GTAC 3 cut(s) 182, 271, 992
RseI CAYNNNNRTG 2 cut(s) 36, 531
SatI GCNGC 5 cut(s) 879, 1323, 1718, 1721, 2244
Sau3AI GATC 9 cut(s) 252, 328, 412, 511, 624, 654, 1357, 1477, 2056
Sau96I GGNCC 2 cut(s) 1422, 1796
ScaI AGTACT 1 cut(s) 993
SchI GAGTC 3 cut(s) 707, 884, 1821
ScrFI CCNGG 9 cut(s) 311, 651, 869, 1073, 1139, 1261, 1297, 1355, 1888
SduI GDGCHC 5 cut(s) 1038, 1176, 1266, 1372, 1557
SfcI CTRYAG 3 cut(s) 129, 790, 2202
SinI GGWCC 2 cut(s) 1422, 1796
SmiMI CAYNNNNRTG 2 cut(s) 36, 531
SmlI CTYRAG 4 cut(s) 1121, 1417, 1628, 2064
SmoI CTYRAG 4 cut(s) 1121, 1417, 1628, 2064
SphI GCATGC 1 cut(s) 2228
SseBI AGGCCT 1 cut(s) 1119
SsiI CCGC 4 cut(s) 441, 1177, 1437, 2147
SspI AATATT 2 cut(s) 1471, 1831
SspMI CTAG 6 cut(s) 18, 57, 410, 1031, 1427, 1944
StuI AGGCCT 1 cut(s) 1119
StyD4I CCNGG 9 cut(s) 309, 649, 867, 1071, 1137, 1259, 1295, 1353, 1886
StyI CCWWGG 4 cut(s) 233, 388, 658, 1536
TaaI ACNGT 6 cut(s) 1064, 1228, 1241, 1777, 1822, 1954
TaiI ACGT 3 cut(s) 196, 1581, 2258
TaqI TCGA 2 cut(s) 121, 973
TaqII GACCGA 1 cut(s) 2080
TatI WGTACW 2 cut(s) 270, 991
TfiI GAWTC 6 cut(s) 806, 925, 1076, 1382, 1501, 2175
TscAI CASTG 3 cut(s) 1231, 1246, 1770
TseFI GTSAC 1 cut(s) 1666
TseI GCWGC 5 cut(s) 878, 1322, 1717, 1720, 2243
Tsp45I GTSAC 1 cut(s) 1666
TspDTI ATGAA 8 cut(s) 57, 662, 758, 839, 966, 1068, 1110, 1473
TspGWI ACGGA 2 cut(s) 199, 1034
TspRI CASTG 3 cut(s) 1231, 1246, 1770
Tth111I GACNNNGTC 2 cut(s) 1611, 1733
Vha464I CTTAAG 2 cut(s) 1121, 1628
VneI GTGCAC 1 cut(s) 1034
VpaK11BI GGWCC 2 cut(s) 1422, 1796
VspI ATTAAT 2 cut(s) 204, 258
XagI CCTNNNNNAGG 1 cut(s) 753
XapI RAATTY 9 cut(s) 484, 553, 766, 783, 1054, 1585, 1633, 2131, 2167
XceI RCATGY 2 cut(s) 885, 2228
XmiI GTMKAC 1 cut(s) 1840
XmnI GAANNNNTTC 1 cut(s) 76
XspI CTAG 6 cut(s) 18, 57, 410, 1031, 1427, 1944
ZrmI AGTACT 1 cut(s) 993
Zsp2I ATGCAT 1 cut(s) 2230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.