Rw2G030080

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000551
Physical Location & Seq
Reverse (-)
49183881 .. 49191859
7979 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G030080.1

Sequence Viewer

Length: 1734 bp
ATGGGGGGAGCTTGTTCTAGGAAGAGAAACCATAGAGATGATGAAGATAATTTTCCTAGAGGGATTTCCAGAAGATATTCCAAAAGTGGGAGTTCAAAGTGGTTGGCAACCTCCTTCTCTCGACCTGCTATAGATATTCAACATGACAAAGGGCAATGTCCATCCCTCATGGACTTGTGCGTACGGAAAATACGTGAGGACATTAATAAATATAGCACATTCTCTATGCTCCCAAGGGATATTAGTCAACAGATCATTAATGAGTTGGTGTACTCTGGATGCCTAACTGATGTTTCTTTTGAAGCTTTCCGGGATTGTGCTTTGCAGGATCTTTACTTGGGAGAATACCCTAATGTAAATGATACTTGGATGGATGTCATATCCTCCCAAGGGTCATCTTTGCTCTCACTAGATCTCTCTGGTTCCGATGTTACTGACAGCGGGTTAATTTATCTCAAAGATTGCACAAATCTCCAAGCGTTAAATTTTAATGATTGTGATGAGATATCAGATCAGGGGCTGGAACACATAAGTGGTCTATCTAACTTGACAAATTTGAGTTTTAGAAGAAATGGTGCAATTACTTCTCATGGAATGAGTGCCTTTGCTAATTTATTTGGCTTGATCAAGTTGGACTTGGAGAGATGCCCAGGGATCCATGGTGGACTTGTTCATCTTCAAGGTTTAACAAAATTAGAGTCTCTTAATATCAAATGGTGCAACTCCATAGCAGATGCTGACATGAAGCCTCTCTCAGGGCTTACAAATTTGAAAAGCATACAAATTTCCTGCAGTAAGGTTACTGATTCTGGCATTACTTATATGAAAGGTCTTCACAATCTTTCTCTTCTGAACTTGGAGGGATGCCTGGTAACTGCTGCATGTTTGGACTCTCTTTCAGCTCTTGATGCCCTGCTATATCTGAATCTGAGCCGATGTCATCTGACTGATGAAGGATGTGAGAAGTTTTCTCGATTTGGAAACTTAAAAGTACTAAACTTGGGGTTCAATGACATCACGGATGCCTGTCTAGTGCACTTAAAAGGTGGTATTTGTTGTCTGAACCTGGATTCATGTAGAATTGGTGATGAAGGGCTGGTTAACTTGACAGGCCTTAAGCATCTGAAATGCCTGGAATTGTCAGATACTGAAGTTGGAAGCAATGGGCTCCGCCATTTGTCAGGATTGGTTAAATTAGAAAGTATAAATCTGTCTTTCACTGTGGTTACTGACAGTGGTTTAAGAAAGCTGTCTGGGCTCTCATCTCTTAAATCGCTTAATTTGGATGCCCGGCAAATAACAGATACTGGACTTGTGCTCTTACAAGTAAGTTTGACCGGATTGACGCACCTGGATCTGTTTGGAGCCCGAATTACAGATTCTGGAACAAACTATCTACGAAGCTTTAAAAACTTGAGGTCCCTAGAAATATGCGGTGGAGGATTGACAGATGCTGGAGTAAAGAATATTAAAGATCTTTCATCCTTGACCCTATTGAATCTATCACAAAACTGCAACCTAACAGATAAAACCTTGGAGTTGATTTCTGGGCTCACAGGATTGGTCTCTTTAAACGTTTCAAATTCTCGCATCACCCACTCAGGACTGCGTCATTTGAAACTACTTAAGAATTTGAAGTCTCTCACTTTGGAAGCCTGCAAGGTGACTGCAAATGACATTAGGAAGCTTCAATTGACTGACCTTCCAAATCTGGTAAGCTTCCGGCCTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_5 LRR_6 LRR_8

Protein Analysis

577

Amino Acids

62.95

Weight (kDa)

6.4

Isoelectric Point (pI)

35.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 150 - 204 1.3e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
LRR_14 PF23598 275 - 505 1.8e-08 Leucine-rich repeat region
LRR_8 PF13855 471 - 531 2.6e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15740
fragaria_vesca FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_7g04581
malus_domestica MD02G1018400.v1.1 MD15G1162400.v1.1 MD17G1217000.v1.1
prunus_persica Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1
pyrus_communis pycom15g14600 pycom17g22160
rosa_chinensis RchiOBHm_Chr1g0325881 RchiOBHm_Chr2g0087081 RchiOBHm_Chr2g0134401 RchiOBHm_Chr6g0252571
rosa_laevigata RLG00000015828 RLG00000019390
rosa_multiflora Rmu_co8182664.1_g000001 Rmu_sc0005550.1_g000003 Rmu_sc0013657.1_g000009 Rmu_ssc0000064.1_g000031
rosa_roxburghii Rroxscaffold_2G00110270 Rroxscaffold_3G00253750 Rroxscaffold_7G00171870
rosa_rugosa Rorug01G0472200 Rorug01G0472300 Rorug02G0316800 Rorug05G0039000 Rorug05G0039100 Rorug06G0116400
rosa_samantha Rh1DG076800 Rh2AG025600 Rh2AG369200 Rh2BG025300 Rh2BG375300 Rh2CG025900 Rh2CG352900 Rh2CG433900 Rh2DG025800 Rh2DG392400 Rh3DG227300 Rh7BG234800 Rh7CG498200
rosa_wichuraiana Rw1G005860 Rw2G002030 Rw2G030080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 133
AciI CCGC 3 cut(s) 441, 1171, 1434
AclI AACGTT 1 cut(s) 1575
AclWI GGATC 4 cut(s) 336, 649, 662, 1362
AcsI RAATTY 6 cut(s) 484, 553, 766, 783, 1582, 1630
AcuI CTGAAG 1 cut(s) 1170
AfaI GTAC 3 cut(s) 183, 272, 993
AfiI CCNNNNNNNGG 3 cut(s) 87, 390, 755
AflII CTTAAG 2 cut(s) 1115, 1625
AjnI CCWGG 5 cut(s) 649, 867, 1065, 1131, 1350
AleI CACNNNNGTG 1 cut(s) 531
AluBI AGCT 7 cut(s) 11, 305, 902, 1249, 1404, 1687, 1719
AluI AGCT 7 cut(s) 11, 305, 902, 1249, 1404, 1687, 1719
Alw21I GWGCWC 2 cut(s) 1038, 1320
Alw26I GTCTC 3 cut(s) 705, 1570, 1644
Alw44I GTGCAC 1 cut(s) 1034
AlwI GGATC 4 cut(s) 336, 649, 662, 1362
AlwNI CAGNNNCTG 6 cut(s) 520, 737, 1148, 1307, 1382, 1454
AoxI GGCC 2 cut(s) 1111, 1724
ApaLI GTGCAC 1 cut(s) 1034
ApeKI GCWGC 1 cut(s) 878
ApoI RAATTY 6 cut(s) 484, 553, 766, 783, 1582, 1630
ArsI GACNNNNNNTTYG 2 cut(s) 683, 715
AseI ATTAAT 2 cut(s) 204, 258
Asp700I GAANNNNTTC 1 cut(s) 76
AspS9I GGNCC 1 cut(s) 1419
AsuC2I CCSGG 2 cut(s) 311, 1291
AsuHPI GGTGA 3 cut(s) 1097, 1585, 1675
AvaII GGWCC 1 cut(s) 1419
BaeGI GKGCMC 1 cut(s) 1038
BaeI ACNNNNGTAYC 2 cut(s) 1137, 1170
BamHI GGATCC 1 cut(s) 654
BanII GRGCYC 4 cut(s) 1170, 1260, 1369, 1554
BbsI GAAGAC 1 cut(s) 824
Bbv12I GWGCWC 2 cut(s) 1038, 1320
BbvI GCAGC 1 cut(s) 865
BccI CCATC 2 cut(s) 169, 364
BciT130I CCWGG 5 cut(s) 651, 869, 1067, 1133, 1352
BclI TGATCA 1 cut(s) 624
BcnI CCSGG 2 cut(s) 311, 1291
BcoDI GTCTC 3 cut(s) 705, 1570, 1644
BfaI CTAG 5 cut(s) 18, 57, 410, 1031, 1424
BfmI CTRYAG 2 cut(s) 129, 790
BfrI CTTAAG 2 cut(s) 1115, 1625
BfuAI ACCTGC 1 cut(s) 133
BglII AGATCT 2 cut(s) 412, 1474
BisI GCNGC 1 cut(s) 879
BlsI GCNGC 1 cut(s) 880
BmcAI AGTACT 1 cut(s) 993
Bme1390I CCNGG 7 cut(s) 311, 651, 869, 1067, 1133, 1291, 1352
Bme18I GGWCC 1 cut(s) 1419
BmgT120I GGNCC 1 cut(s) 1419
BmiI GGNNCC 5 cut(s) 424, 656, 1169, 1366, 1421
BmrFI CCNGG 7 cut(s) 311, 651, 869, 1067, 1133, 1291, 1352
BpiI GAAGAC 1 cut(s) 824
BpmI CTGGAG 1 cut(s) 1476
BpuEI CTTGAG 1 cut(s) 1435
BpuMI CCSGG 2 cut(s) 311, 1291
BsaAI YACGTR 1 cut(s) 194
BsaI GGTCTC 1 cut(s) 1570
BsaJI CCNNGG 6 cut(s) 233, 388, 649, 650, 658, 1533
BsaWI WCCGGW 1 cut(s) 1337
Bsc4I CCNNNNNNNGG 3 cut(s) 87, 390, 755
Bse1I ACTGG 1 cut(s) 1312
Bse3DI GCAATG 2 cut(s) 161, 1168
BseBI CCWGG 5 cut(s) 651, 869, 1067, 1133, 1352
BseDI CCNNGG 6 cut(s) 233, 388, 649, 650, 658, 1533
BseGI GGATG 9 cut(s) 161, 284, 375, 379, 869, 962, 1027, 1291, 1481
BseLI CCNNNNNNNGG 3 cut(s) 87, 390, 755
BseMI GCAATG 2 cut(s) 161, 1168
BseMII CTCAG 3 cut(s) 768, 920, 1614
BseNI ACTGG 1 cut(s) 1312
BseSI GKGCMC 1 cut(s) 1038
BseXI GCAGC 1 cut(s) 865
BshFI GGCC 2 cut(s) 1113, 1726
BsiHKAI GWGCWC 2 cut(s) 1038, 1320
BsiSI CCGG 4 cut(s) 310, 1291, 1338, 1723
BsiWI CGTACG 1 cut(s) 181
BslFI GGGAC 1 cut(s) 1405
BslI CCNNNNNNNGG 3 cut(s) 87, 390, 755
BsmAI GTCTC 3 cut(s) 705, 1570, 1644
BsmFI GGGAC 1 cut(s) 1405
BsnI GGCC 2 cut(s) 1113, 1726
Bso31I GGTCTC 1 cut(s) 1570
Bsp1286I GDGCHC 6 cut(s) 1038, 1170, 1260, 1320, 1369, 1554
Bsp143I GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1354, 1474
Bsp19I CCATGG 1 cut(s) 658
BspACI CCGC 3 cut(s) 441, 1171, 1434
BspANI GGCC 2 cut(s) 1113, 1726
BspCNI CTCAG 3 cut(s) 767, 921, 1613
BspLI GGNNCC 5 cut(s) 424, 656, 1169, 1366, 1421
BspMAI CTGCAG 1 cut(s) 794
BspMI ACCTGC 1 cut(s) 133
BspPI GGATC 4 cut(s) 336, 649, 662, 1362
BspTI CTTAAG 2 cut(s) 1115, 1625
BspTNI GGTCTC 1 cut(s) 1570
BsrDI GCAATG 2 cut(s) 161, 1168
BsrI ACTGG 1 cut(s) 1312
BssECI CCNNGG 6 cut(s) 233, 388, 649, 650, 658, 1533
BssMI GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1354, 1474
BssT1I CCWWGG 4 cut(s) 233, 388, 658, 1533
Bst2UI CCWGG 5 cut(s) 651, 869, 1067, 1133, 1352
Bst4CI ACNGT 2 cut(s) 1222, 1235
Bst6I CTCTTC 2 cut(s) 17, 852
BstAFI CTTAAG 2 cut(s) 1115, 1625
BstBAI YACGTR 1 cut(s) 194
BstC8I GCNNGC 1 cut(s) 1657
BstDEI CTNAG 3 cut(s) 754, 929, 1600
BstDSI CCRYGG 1 cut(s) 658
BstENI CCTNNNNNAGG 1 cut(s) 753
BstF5I GGATG 9 cut(s) 161, 284, 375, 379, 869, 962, 1027, 1291, 1481
BstKTI GATC 8 cut(s) 255, 331, 415, 514, 627, 657, 1357, 1477
BstMAI GTCTC 3 cut(s) 705, 1570, 1644
BstMBI GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1354, 1474
BstMWI GCNNNNNNNGC 2 cut(s) 908, 1255
BstNI CCWGG 5 cut(s) 651, 869, 1067, 1133, 1352
BstNSI RCATGY 1 cut(s) 885
BstSCI CCNGG 7 cut(s) 309, 649, 867, 1065, 1131, 1289, 1350
BstSFI CTRYAG 2 cut(s) 129, 790
BstSLI GKGCMC 1 cut(s) 1038
BstV1I GCAGC 1 cut(s) 865
BstV2I GAAGAC 1 cut(s) 824
BstX2I RGATCY 5 cut(s) 328, 412, 654, 1354, 1474
BstYI RGATCY 5 cut(s) 328, 412, 654, 1354, 1474
BsuRI GGCC 2 cut(s) 1113, 1726
BtgI CCRYGG 1 cut(s) 658
BtsCI GGATG 9 cut(s) 161, 284, 375, 379, 869, 962, 1027, 1291, 1481
BtsIMutI CAGTG 2 cut(s) 1218, 1240
BveI ACCTGC 1 cut(s) 133
Cac8I GCNNGC 1 cut(s) 1657
CaiI CAGNNNCTG 6 cut(s) 520, 737, 1148, 1307, 1382, 1454
Cfr13I GGNCC 1 cut(s) 1419
CseI GACGC 2 cut(s) 1354, 1598
Csp6I GTAC 3 cut(s) 182, 271, 992
CviAII CATG 7 cut(s) 143, 169, 590, 659, 742, 882, 1074
CviQI GTAC 3 cut(s) 182, 271, 992
DdeI CTNAG 3 cut(s) 754, 929, 1600
DpnI GATC 8 cut(s) 254, 330, 414, 513, 626, 656, 1356, 1476
DpnII GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1354, 1474
DraI TTTAAA 2 cut(s) 1408, 1572
Eam1104I CTCTTC 2 cut(s) 17, 852
EarI CTCTTC 2 cut(s) 17, 852
EciI GGCGGA 1 cut(s) 1160
Eco130I CCWWGG 4 cut(s) 233, 388, 658, 1533
Eco147I AGGCCT 1 cut(s) 1113
Eco24I GRGCYC 4 cut(s) 1170, 1260, 1369, 1554
Eco31I GGTCTC 1 cut(s) 1570
Eco32I GATATC 1 cut(s) 507
Eco47I GGWCC 1 cut(s) 1419
Eco57I CTGAAG 1 cut(s) 1170
EcoNI CCTNNNNNAGG 1 cut(s) 753
EcoO109I RGGNCCY 1 cut(s) 1419
EcoRII CCWGG 5 cut(s) 649, 867, 1065, 1131, 1350
EcoRV GATATC 1 cut(s) 507
EcoT14I CCWWGG 4 cut(s) 233, 388, 658, 1533
EcoT38I GRGCYC 4 cut(s) 1170, 1260, 1369, 1554
ErhI CCWWGG 4 cut(s) 233, 388, 658, 1533
FaeI CATG 7 cut(s) 146, 172, 593, 662, 745, 885, 1077
FalI AAGNNNNNCTT 2 cut(s) 620, 652
FaqI GGGAC 1 cut(s) 1405
FatI CATG 7 cut(s) 142, 168, 589, 658, 741, 881, 1073
FauI CCCGC 1 cut(s) 434
FbaI TGATCA 1 cut(s) 624
Fnu4HI GCNGC 1 cut(s) 879
FokI GGATG 9 cut(s) 148, 291, 382, 386, 876, 969, 1034, 1298, 1468
FriOI GRGCYC 4 cut(s) 1170, 1260, 1369, 1554
Fsp4HI GCNGC 1 cut(s) 879
FspBI CTAG 5 cut(s) 18, 57, 410, 1031, 1424
GluI GCNGC 1 cut(s) 879
GsuI CTGGAG 1 cut(s) 1476
HaeIII GGCC 2 cut(s) 1113, 1726
HapII CCGG 4 cut(s) 310, 1291, 1338, 1723
HgaI GACGC 2 cut(s) 1354, 1598
Hin1II CATG 7 cut(s) 146, 172, 593, 662, 745, 885, 1077
HincII GTYRAC 2 cut(s) 248, 1102
HindII GTYRAC 2 cut(s) 248, 1102
HindIII AAGCTT 4 cut(s) 303, 1402, 1685, 1717
HinfI GANTC 7 cut(s) 698, 806, 890, 925, 1070, 1379, 1498
HpaI GTTAAC 1 cut(s) 1102
HpaII CCGG 4 cut(s) 310, 1291, 1338, 1723
HphI GGTGA 3 cut(s) 1097, 1585, 1675
Hpy166II GTNNAC 5 cut(s) 248, 271, 665, 1036, 1102
Hpy188I TCNGA 9 cut(s) 427, 511, 852, 924, 930, 945, 1062, 1125, 1144
Hpy188III TCNNGA 8 cut(s) 69, 120, 276, 905, 972, 1182, 1383, 1602
Hpy8I GTNNAC 5 cut(s) 248, 271, 665, 1036, 1102
HpyAV CCTTC 4 cut(s) 124, 947, 1085, 1712
HpyCH4III ACNGT 2 cut(s) 1222, 1235
HpyCH4IV ACGT 2 cut(s) 193, 1575
HpyF10VI GCNNNNNNNGC 2 cut(s) 908, 1255
HpyF3I CTNAG 3 cut(s) 754, 929, 1600
HpySE526I ACGT 2 cut(s) 193, 1575
Hsp92II CATG 7 cut(s) 146, 172, 593, 662, 745, 885, 1077
Ksp22I TGATCA 1 cut(s) 624
KspAI GTTAAC 1 cut(s) 1102
Kzo9I GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1354, 1474
LmnI GCTCC 4 cut(s) 8, 234, 1173, 1364
Lsp1109I GCAGC 1 cut(s) 865
MaeI CTAG 5 cut(s) 18, 57, 410, 1031, 1424
MaeII ACGT 2 cut(s) 193, 1575
MaeIII GTNAC 5 cut(s) 430, 799, 871, 1225, 1663
MalI GATC 8 cut(s) 254, 330, 414, 513, 626, 656, 1356, 1476
MboI GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1354, 1474
MboII GAAGA 7 cut(s) 34, 56, 84, 579, 668, 824, 839
MfeI CAATTG 1 cut(s) 1691
MflI RGATCY 5 cut(s) 328, 412, 654, 1354, 1474
MhlI GDGCHC 6 cut(s) 1038, 1170, 1260, 1320, 1369, 1554
MlyI GAGTC 2 cut(s) 707, 884
MmeI TCCRAC 2 cut(s) 612, 1135
MnlI CCTC 9 cut(s) 53, 121, 176, 190, 394, 759, 853, 1410, 1433
MroXI GAANNNNTTC 1 cut(s) 76
MslI CAYNNNNRTG 2 cut(s) 36, 531
MspA1I CMGCKG 1 cut(s) 441
MspCI CTTAAG 2 cut(s) 1115, 1625
MspI CCGG 4 cut(s) 310, 1291, 1338, 1723
MspR9I CCNGG 7 cut(s) 311, 651, 869, 1067, 1133, 1291, 1352
MunI CAATTG 1 cut(s) 1691
MvaI CCWGG 5 cut(s) 651, 869, 1067, 1133, 1352
MwoI GCNNNNNNNGC 2 cut(s) 908, 1255
NciI CCSGG 2 cut(s) 311, 1291
NcoI CCATGG 1 cut(s) 658
NdeII GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1354, 1474
NlaIII CATG 7 cut(s) 146, 172, 593, 662, 745, 885, 1077
NlaIV GGNNCC 5 cut(s) 424, 656, 1169, 1366, 1421
NmuCI GTSAC 1 cut(s) 1663
NspI RCATGY 1 cut(s) 885
OliI CACNNNNGTG 1 cut(s) 531
PasI CCCWGGG 1 cut(s) 650
PceI AGGCCT 1 cut(s) 1113
PcsI WCGNNNNNNNCGW 1 cut(s) 190
PdmI GAANNNNTTC 1 cut(s) 76
PfeI GAWTC 5 cut(s) 806, 925, 1070, 1379, 1498
Pfl23II CGTACG 1 cut(s) 181
PflFI GACNNNGTC 1 cut(s) 1608
PfoI TCCNGGA 1 cut(s) 309
PkrI GCNGC 1 cut(s) 880
PleI GAGTC 2 cut(s) 706, 884
PpsI GAGTC 2 cut(s) 706, 884
Ppu21I YACGTR 1 cut(s) 194
PpuMI RGGWCCY 1 cut(s) 1419
PshBI ATTAAT 2 cut(s) 204, 258
Psp1406I AACGTT 1 cut(s) 1575
Psp5II RGGWCCY 1 cut(s) 1419
Psp6I CCWGG 5 cut(s) 649, 867, 1065, 1131, 1350
PspGI CCWGG 5 cut(s) 649, 867, 1065, 1131, 1350
PspLI CGTACG 1 cut(s) 181
PspN4I GGNNCC 5 cut(s) 424, 656, 1169, 1366, 1421
PspPI GGNCC 1 cut(s) 1419
PspPPI RGGWCCY 1 cut(s) 1419
PstI CTGCAG 1 cut(s) 794
PstNI CAGNNNCTG 6 cut(s) 520, 737, 1148, 1307, 1382, 1454
PsuI RGATCY 5 cut(s) 328, 412, 654, 1354, 1474
PsyI GACNNNGTC 1 cut(s) 1608
RsaI GTAC 3 cut(s) 183, 272, 993
RsaNI GTAC 3 cut(s) 182, 271, 992
RseI CAYNNNNRTG 2 cut(s) 36, 531
SatI GCNGC 1 cut(s) 879
Sau3AI GATC 8 cut(s) 252, 328, 412, 511, 624, 654, 1354, 1474
Sau96I GGNCC 1 cut(s) 1419
ScaI AGTACT 1 cut(s) 993
SchI GAGTC 2 cut(s) 707, 884
ScrFI CCNGG 7 cut(s) 311, 651, 869, 1067, 1133, 1291, 1352
SduI GDGCHC 6 cut(s) 1038, 1170, 1260, 1320, 1369, 1554
SfcI CTRYAG 2 cut(s) 129, 790
SinI GGWCC 1 cut(s) 1419
SmiMI CAYNNNNRTG 2 cut(s) 36, 531
SmlI CTYRAG 3 cut(s) 1115, 1414, 1625
SmoI CTYRAG 3 cut(s) 1115, 1414, 1625
SseBI AGGCCT 1 cut(s) 1113
SsiI CCGC 3 cut(s) 441, 1171, 1434
SspI AATATT 1 cut(s) 1468
SspMI CTAG 5 cut(s) 18, 57, 410, 1031, 1424
StuI AGGCCT 1 cut(s) 1113
StyD4I CCNGG 7 cut(s) 309, 649, 867, 1065, 1131, 1289, 1350
StyI CCWWGG 4 cut(s) 233, 388, 658, 1533
TaaI ACNGT 2 cut(s) 1222, 1235
TaiI ACGT 2 cut(s) 196, 1578
TaqI TCGA 2 cut(s) 121, 973
TatI WGTACW 2 cut(s) 270, 991
TfiI GAWTC 5 cut(s) 806, 925, 1070, 1379, 1498
TscAI CASTG 2 cut(s) 1225, 1240
TseFI GTSAC 1 cut(s) 1663
TseI GCWGC 1 cut(s) 878
Tsp45I GTSAC 1 cut(s) 1663
TspDTI ATGAA 8 cut(s) 57, 662, 758, 839, 966, 1062, 1104, 1470
TspGWI ACGGA 2 cut(s) 199, 1034
TspRI CASTG 2 cut(s) 1225, 1240
Tth111I GACNNNGTC 1 cut(s) 1608
Vha464I CTTAAG 2 cut(s) 1115, 1625
VneI GTGCAC 1 cut(s) 1034
VpaK11BI GGWCC 1 cut(s) 1419
VspI ATTAAT 2 cut(s) 204, 258
XagI CCTNNNNNAGG 1 cut(s) 753
XapI RAATTY 6 cut(s) 484, 553, 766, 783, 1582, 1630
XceI RCATGY 1 cut(s) 885
XmnI GAANNNNTTC 1 cut(s) 76
XspI CTAG 5 cut(s) 18, 57, 410, 1031, 1424
ZrmI AGTACT 1 cut(s) 993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.