Rmu_sc0005550.1_g000003

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005550.1
OG0000551
Physical Location & Seq
Reverse (-)
9321 .. 18519
9199 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005550.1_g000003.1.cds

Sequence Viewer

Length: 2319 bp
atgatggggggtatttgctcgagaaagagagacgaaccggtcattgaagaaggcggtgttagtagggtagtgtccggaagatatggtaaaagtagcagttcaaaatggctaggaacttcgtcttttcgttccactgtagaacagtctccaggagtagcaggcatttgcccatctctcttggaattatgcatttccaaaatatgccgggacattgacaaatacagtacgctttccctgctgcctagggatgtgagtcagcaaatctttaatgaattggtctcttcccaatctcttactcatgattctctccaggcttttagagattgtgctcttgaggatgtttgtttgggtgaatacccttctgtgaatgataattggatggatgccatctgttcacaaggttcatctctactatctgttgatctctctggttctgaggtgacagatgctggattggatcttctaaaagactgctcgaacctccaatcattaacttataattactgtgaccatgtttcagaacatggacttaagcacatcagtggtctttcaaatttgaaatgcttgagttttaaaaggagcagtgaaattagtgctgaagggatgcacgctttctccagcctttttaacttagaaaagttggacttggagaggtgtcctgagattcatggtggctttgttcatcttaaaggtttgacgaaactaaagtctcttaatgttagatgttgtaaatgcgtcacagattcagatttaaaggccatctcagggcttacaaacctcaatgaattacagatatctaactgcaacattactgattctggaatctcttatttgaaaggcttgcagaagcttaatatgttgaacttagagggatgcaatgttacttctgcatgtttggaatctatttcagctcttgttgccctggcttacttaaatctcaacagatgcagtttatctgatgaaggatgtgataagttttctggccttacaaacttgaaggttttgagcttgggattcaacagtatcacagatgcatgtttgctgcatctaaaaggtttgacaaatttggagagcttgaacctggattcttgtaagataggtgacgaggggcttgcaagcttggcagggtctgtactcttgaagaatttggagttatctgatactgaagtcggaagcaatgggattcgtcatctctcagggttaaagaatctggagaacttaaacttgtcgttcaccctggtaactgacggtagtctgaaaaagttatctggactgacatctctcaaatcacttaatctggatgctcgccaaattactgatgctggacttgcagctattacaggtcttacaaaattgacgcatctggatctctttggcgctcggatttcagactctggagcaaactctttaaaacacttcaagaaccttcaatctcttgaaatatgtggtggaggattgactgatgctggtgtgaagaatctcaaagatcttgtctgtctgacatggctaaatttgtcgcagaactgcaacttgactgataaatccttggaagtgatttctggtttgactgcattggtttcattaaacatttcaaattcacgcattaccaatgagggattgcagtatttaaagcctttgaagaatctacgttccttaaccttggagtccaaaaaagtcgctccggagatctcggagctgagcataccaaaccctcgaggcttcggtagcaaggcggcggcgatctccagatctccgtttgctttgggtgactcgggcatcgcaggcgtcgctctttcgtggcggaggcggtgcattctggtggtggatcaacttcgacttgtgatcgaagctatcgggctttgggatttaaggtgcctccaagctagagctaaagtagctttctttccagctatcttgatgggggaaggccgtggaaggccgcctcttctgaaaggtcataaccgatcgatctgggggtgggaggcgaagggtttgggtagtgggcttttgggcctctaccgatgtaggctgcatatgcaagctgggcaactaggcctggttggccttagcccttccaacacttccagccgaccgtcggcctcgcccttccgccatgggaagaaaatgatggagcctggtgtgggaaatcctaccgggaaccacaactcagccggaaaccagacccgtcataccacagtctctccatttccgtctcgtcctcctttgtctggaaaaacgatgccagagcgccctattgcagatcggagccacaagaagctgccgcactgctcgcgaaacctaggtttaggtctttcctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_5 LRR_6 LRR_8

Protein Analysis

772

Amino Acids

82.95

Weight (kDa)

8.6

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15740
fragaria_vesca FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_7g04581
malus_domestica MD02G1018400.v1.1 MD15G1162400.v1.1 MD17G1217000.v1.1
prunus_persica Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1
pyrus_communis pycom15g14600 pycom17g22160
rosa_chinensis RchiOBHm_Chr1g0325881 RchiOBHm_Chr2g0087081 RchiOBHm_Chr2g0134401 RchiOBHm_Chr6g0252571
rosa_laevigata RLG00000015828 RLG00000019390
rosa_multiflora Rmu_co8182664.1_g000001 Rmu_sc0005550.1_g000003 Rmu_sc0013657.1_g000009 Rmu_ssc0000064.1_g000031
rosa_roxburghii Rroxscaffold_2G00110270 Rroxscaffold_3G00253750 Rroxscaffold_7G00171870
rosa_rugosa Rorug01G0472200 Rorug01G0472300 Rorug02G0316800 Rorug05G0039000 Rorug05G0039100 Rorug06G0116400
rosa_samantha Rh1DG076800 Rh2AG025600 Rh2AG369200 Rh2BG025300 Rh2BG375300 Rh2CG025900 Rh2CG352900 Rh2CG433900 Rh2DG025800 Rh2DG392400 Rh3DG227300 Rh7BG234800 Rh7CG498200
rosa_wichuraiana Rw1G005860 Rw2G002030 Rw2G030080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 498
AasI GACNNNNNNGTC 1 cut(s) 38
AbsI CCTCGAGG 1 cut(s) 1713
AccB1I GGYRCC 1 cut(s) 1872
AccII CGCG 1 cut(s) 2293
AccIII TCCGGA 2 cut(s) 74, 1681
AciI CCGC 8 cut(s) 54, 1733, 1736, 1801, 1807, 1940, 2110, 2282
AclWI GGATC 3 cut(s) 465, 1374, 1833
AcsI RAATTY 5 cut(s) 553, 1063, 1144, 1510, 1594
AcuI CTGAAG 2 cut(s) 618, 1185
AcyI GRCGYC 1 cut(s) 1785
AfaI GTAC 2 cut(s) 226, 1134
AfiI CCNNNNNNNGG 4 cut(s) 765, 2095, 2141, 2228
AflII CTTAAG 1 cut(s) 530
AgeI ACCGGT 1 cut(s) 37
AjnI CCWGG 7 cut(s) 148, 309, 921, 1080, 1236, 2055, 2134
AleI CACNNNNGTG 1 cut(s) 540
Alw21I GWGCWC 1 cut(s) 331
Alw26I GTCTC 6 cut(s) 24, 150, 283, 714, 2203, 2217
AlwI GGATC 3 cut(s) 465, 1374, 1833
AlwNI CAGNNNCTG 3 cut(s) 449, 1130, 1394
Ama87I CYCGRG 3 cut(s) 19, 1713, 1771
Aor13HI TCCGGA 2 cut(s) 74, 1681
AoxI GGCC 8 cut(s) 756, 982, 1927, 1937, 2011, 2053, 2062, 2097
ApeKI GCWGC 5 cut(s) 238, 1042, 1331, 2029, 2278
ApoI RAATTY 5 cut(s) 553, 1063, 1144, 1510, 1594
ArsI GACNNNNNNTTYG 4 cut(s) 692, 724, 1476, 1508
AsiGI ACCGGT 1 cut(s) 37
AspA2I CCTAGG 2 cut(s) 242, 2299
AspLEI GCGC 2 cut(s) 1379, 2250
AspS9I GGNCC 1 cut(s) 2011
AsuC2I CCSGG 2 cut(s) 206, 2155
AsuHPI GGTGA 5 cut(s) 362, 451, 1112, 1225, 1778
AvaI CYCGRG 3 cut(s) 19, 1713, 1771
AvrII CCTAGG 2 cut(s) 242, 2299
BaeI ACNNNNGTAYC 2 cut(s) 1152, 1185
BanI GGYRCC 1 cut(s) 1872
Bbv12I GWGCWC 1 cut(s) 331
BbvI GCAGC 5 cut(s) 225, 1029, 1343, 2016, 2265
BccI CCATC 6 cut(s) 178, 373, 395, 767, 1912, 2122
BceAI ACGGC 1 cut(s) 1914
BcgI CGANNNNNNTGC 2 cut(s) 1094, 1128
BciT130I CCWGG 7 cut(s) 150, 311, 923, 1082, 1238, 2057, 2136
BcnI CCSGG 2 cut(s) 206, 2155
BcoDI GTCTC 6 cut(s) 24, 150, 283, 714, 2203, 2217
BfaI CTAG 5 cut(s) 110, 243, 1884, 2051, 2300
BfmI CTRYAG 1 cut(s) 135
BfoI RGCGCY 2 cut(s) 1380, 2251
BfrI CTTAAG 1 cut(s) 530
BglI GCCNNNNNGGC 1 cut(s) 2061
BglII AGATCT 3 cut(s) 1486, 1686, 1748
BisI GCNGC 9 cut(s) 239, 1043, 1332, 1734, 1737, 1940, 2030, 2279, 2282
BlnI CCTAGG 2 cut(s) 242, 2299
BlpI GCTNAGC 1 cut(s) 1697
BlsI GCNGC 9 cut(s) 240, 1044, 1333, 1735, 1738, 1941, 2031, 2280, 2283
Bme1390I CCNGG 9 cut(s) 150, 206, 311, 923, 1082, 1238, 2057, 2136, 2155
BmeT110I CYCGRG 3 cut(s) 19, 1713, 1771
BmgT120I GGNCC 1 cut(s) 2011
BmiI GGNNCC 4 cut(s) 1874, 2133, 2159, 2267
BmrFI CCNGG 9 cut(s) 150, 206, 311, 923, 1082, 1238, 2057, 2136, 2155
BoxI GACNNNNGTC 1 cut(s) 1251
BpmI CTGGAG 6 cut(s) 132, 293, 601, 1232, 1416, 1729
Bpu10I CCTNAGC 1 cut(s) 2066
Bpu1102I GCTNAGC 1 cut(s) 1697
BpuEI CTTGAG 2 cut(s) 353, 586
BpuMI CCSGG 2 cut(s) 206, 2155
Bsa29I ATCGAT 1 cut(s) 1967
BsaHI GRCGYC 1 cut(s) 1785
BsaI GGTCTC 1 cut(s) 283
BsaJI CCNNGG 8 cut(s) 242, 921, 1236, 1545, 1659, 1930, 2113, 2299
BsaWI WCCGGW 3 cut(s) 37, 74, 1681
BsaXI ACNNNNNCTCC 4 cut(s) 599, 629, 2185, 2215
Bsc4I CCNNNNNNNGG 4 cut(s) 765, 2095, 2141, 2228
Bse118I RCCGGY 1 cut(s) 37
Bse3DI GCAATG 2 cut(s) 883, 1183
BseAI TCCGGA 2 cut(s) 74, 1681
BseBI CCWGG 7 cut(s) 150, 311, 923, 1082, 1238, 2057, 2136
BseCI ATCGAT 1 cut(s) 1967
BseDI CCNNGG 8 cut(s) 242, 921, 1236, 1545, 1659, 1930, 2113, 2299
BseGI GGATG 8 cut(s) 253, 343, 384, 388, 609, 878, 971, 1306
BseLI CCNNNNNNNGG 4 cut(s) 765, 2095, 2141, 2228
BseMI GCAATG 2 cut(s) 883, 1183
BseMII CTCAG 6 cut(s) 426, 651, 777, 1209, 1688, 2181
BseXI GCAGC 5 cut(s) 225, 1029, 1343, 2016, 2265
BseYI CCCAGC 1 cut(s) 2042
Bsh1236I CGCG 1 cut(s) 2293
Bsh1285I CGRYCG 2 cut(s) 1967, 2093
BshFI GGCC 8 cut(s) 758, 984, 1929, 1939, 2013, 2055, 2064, 2099
BshNI GGYRCC 1 cut(s) 1872
BshTI ACCGGT 1 cut(s) 37
BshVI ATCGAT 1 cut(s) 1967
BsiEI CGRYCG 2 cut(s) 1967, 2093
BsiHKAI GWGCWC 1 cut(s) 331
BsiHKCI CYCGRG 3 cut(s) 19, 1713, 1771
BsiSI CCGG 6 cut(s) 38, 75, 205, 1682, 2154, 2172
BslFI GGGAC 1 cut(s) 221
BslI CCNNNNNNNGG 4 cut(s) 765, 2095, 2141, 2228
BsmAI GTCTC 6 cut(s) 24, 150, 283, 714, 2203, 2217
BsmBI CGTCTC 2 cut(s) 24, 2217
BsmFI GGGAC 1 cut(s) 221
BsmI GAATGC 1 cut(s) 1812
BsnI GGCC 8 cut(s) 758, 984, 1929, 1939, 2013, 2055, 2064, 2099
Bso31I GGTCTC 1 cut(s) 283
BsoBI CYCGRG 3 cut(s) 19, 1713, 1771
Bsp1286I GDGCHC 1 cut(s) 331
Bsp13I TCCGGA 2 cut(s) 74, 1681
Bsp1720I GCTNAGC 1 cut(s) 1697
Bsp19I CCATGG 1 cut(s) 2113
Bsp68I TCGCGA 1 cut(s) 2293
BspACI CCGC 8 cut(s) 54, 1733, 1736, 1801, 1807, 1940, 2110, 2282
BspANI GGCC 8 cut(s) 758, 984, 1929, 1939, 2013, 2055, 2064, 2099
BspCNI CTCAG 6 cut(s) 427, 652, 776, 1208, 1689, 2180
BspDI ATCGAT 1 cut(s) 1967
BspEI TCCGGA 2 cut(s) 74, 1681
BspFNI CGCG 1 cut(s) 2293
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 4 cut(s) 1874, 2133, 2159, 2267
BspPI GGATC 3 cut(s) 465, 1374, 1833
BspT107I GGYRCC 1 cut(s) 1872
BspTI CTTAAG 1 cut(s) 530
BspTNI GGTCTC 1 cut(s) 283
BsrDI GCAATG 2 cut(s) 883, 1183
BsrFI RCCGGY 1 cut(s) 37
BssAI RCCGGY 1 cut(s) 37
BssECI CCNNGG 8 cut(s) 242, 921, 1236, 1545, 1659, 1930, 2113, 2299
BssNI GRCGYC 1 cut(s) 1785
BssT1I CCWWGG 5 cut(s) 242, 1545, 1659, 2113, 2299
Bst2UI CCWGG 7 cut(s) 150, 311, 923, 1082, 1238, 2057, 2136
Bst4CI ACNGT 8 cut(s) 136, 144, 224, 506, 1022, 1250, 2094, 2197
Bst6I CTCTTC 2 cut(s) 286, 1950
BstACI GRCGYC 1 cut(s) 1785
BstAFI CTTAAG 1 cut(s) 530
BstC8I GCNNGC 9 cut(s) 160, 609, 842, 1113, 1117, 1306, 1783, 2040, 2291
BstDEI CTNAG 9 cut(s) 435, 631, 660, 763, 865, 1195, 1697, 2066, 2167
BstDSI CCRYGG 2 cut(s) 1930, 2113
BstF5I GGATG 8 cut(s) 253, 343, 384, 388, 609, 878, 971, 1306
BstFNI CGCG 1 cut(s) 2293
BstH2I RGCGCY 2 cut(s) 1380, 2251
BstHHI GCGC 2 cut(s) 1379, 2250
BstMAI GTCTC 6 cut(s) 24, 150, 283, 714, 2203, 2217
BstMCI CGRYCG 2 cut(s) 1967, 2093
BstNI CCWGG 7 cut(s) 150, 311, 923, 1082, 1238, 2057, 2136
BstNSI RCATGY 2 cut(s) 894, 1038
BstPAI GACNNNNGTC 1 cut(s) 1251
BstSCI CCNGG 9 cut(s) 148, 204, 309, 921, 1080, 1236, 2055, 2134, 2153
BstSFI CTRYAG 1 cut(s) 135
BstUI CGCG 1 cut(s) 2293
BstV1I GCAGC 5 cut(s) 225, 1029, 1343, 2016, 2265
BstX2I RGATCY 5 cut(s) 457, 1366, 1486, 1686, 1748
BstYI RGATCY 5 cut(s) 457, 1366, 1486, 1686, 1748
Bsu15I ATCGAT 1 cut(s) 1967
BsuRI GGCC 8 cut(s) 758, 984, 1929, 1939, 2013, 2055, 2064, 2099
BsuTUI ATCGAT 1 cut(s) 1967
BtgI CCRYGG 2 cut(s) 1930, 2113
BtgZI GCGATG 1 cut(s) 1762
BtsCI GGATG 8 cut(s) 253, 343, 384, 388, 609, 878, 971, 1306
BtsI GCAGTG 2 cut(s) 589, 2284
BtsIMutI CAGTG 4 cut(s) 132, 547, 589, 2284
BtuMI TCGCGA 1 cut(s) 2293
Cac8I GCNNGC 9 cut(s) 160, 609, 842, 1113, 1117, 1306, 1783, 2040, 2291
CaiI CAGNNNCTG 3 cut(s) 449, 1130, 1394
CciI TCATGA 1 cut(s) 298
CfoI GCGC 2 cut(s) 1379, 2250
Cfr10I RCCGGY 1 cut(s) 37
Cfr13I GGNCC 1 cut(s) 2011
ClaI ATCGAT 1 cut(s) 1967
CseI GACGC 3 cut(s) 724, 1366, 1774
Csp6I GTAC 2 cut(s) 225, 1133
CspAI ACCGGT 1 cut(s) 37
CviAII CATG 8 cut(s) 299, 512, 524, 668, 891, 1035, 1503, 2114
CviQI GTAC 2 cut(s) 225, 1133
DdeI CTNAG 9 cut(s) 435, 631, 660, 763, 865, 1195, 1697, 2066, 2167
DraI TTTAAA 4 cut(s) 574, 753, 1410, 1629
DrdI GACNNNNNNGTC 1 cut(s) 38
DseDI GACNNNNNNGTC 1 cut(s) 38
Eam1104I CTCTTC 2 cut(s) 286, 1950
EarI CTCTTC 2 cut(s) 286, 1950
EciI GGCGGA 2 cut(s) 1816, 2099
Eco130I CCWWGG 5 cut(s) 242, 1545, 1659, 2113, 2299
Eco147I AGGCCT 1 cut(s) 2055
Eco31I GGTCTC 1 cut(s) 283
Eco32I GATATC 1 cut(s) 795
Eco57I CTGAAG 2 cut(s) 618, 1185
Eco88I CYCGRG 3 cut(s) 19, 1713, 1771
EcoRII CCWGG 7 cut(s) 148, 309, 921, 1080, 1236, 2055, 2134
EcoRV GATATC 1 cut(s) 795
EcoT14I CCWWGG 5 cut(s) 242, 1545, 1659, 2113, 2299
EcoT22I ATGCAT 2 cut(s) 191, 1036
ErhI CCWWGG 5 cut(s) 242, 1545, 1659, 2113, 2299
Esp3I CGTCTC 2 cut(s) 24, 2217
FaeI CATG 8 cut(s) 302, 515, 527, 671, 894, 1038, 1506, 2117
FalI AAGNNNNNCTT 2 cut(s) 629, 661
FaqI GGGAC 1 cut(s) 221
FatI CATG 8 cut(s) 298, 511, 523, 667, 890, 1034, 1502, 2113
FauNDI CATATG 1 cut(s) 2034
Fnu4HI GCNGC 9 cut(s) 239, 1043, 1332, 1734, 1737, 1940, 2030, 2279, 2282
FokI GGATG 8 cut(s) 260, 350, 391, 395, 616, 885, 978, 1313
Fsp4HI GCNGC 9 cut(s) 239, 1043, 1332, 1734, 1737, 1940, 2030, 2279, 2282
FspBI CTAG 5 cut(s) 110, 243, 1884, 2051, 2300
GlaI GCGC 2 cut(s) 1378, 2249
GluI GCNGC 9 cut(s) 239, 1043, 1332, 1734, 1737, 1940, 2030, 2279, 2282
GsaI CCCAGC 1 cut(s) 2046
GsuI CTGGAG 6 cut(s) 132, 293, 601, 1232, 1416, 1729
HaeII RGCGCY 2 cut(s) 1380, 2251
HaeIII GGCC 8 cut(s) 758, 984, 1929, 1939, 2013, 2055, 2064, 2099
HapII CCGG 6 cut(s) 38, 75, 205, 1682, 2154, 2172
HgaI GACGC 3 cut(s) 724, 1366, 1774
HhaI GCGC 2 cut(s) 1379, 2250
Hin1I GRCGYC 1 cut(s) 1785
Hin1II CATG 8 cut(s) 302, 515, 527, 671, 894, 1038, 1506, 2117
Hin6I GCGC 2 cut(s) 1377, 2248
HinP1I GCGC 2 cut(s) 1377, 2248
HindIII AAGCTT 2 cut(s) 848, 1117
HpaII CCGG 6 cut(s) 38, 75, 205, 1682, 2154, 2172
HphI GGTGA 5 cut(s) 362, 451, 1112, 1225, 1778
Hpy166II GTNNAC 2 cut(s) 395, 1233
Hpy8I GTNNAC 2 cut(s) 395, 1233
Hpy99I CGWCG 2 cut(s) 1790, 2098
HpyCH4III ACNGT 8 cut(s) 136, 144, 224, 506, 1022, 1250, 2094, 2197
HpyCH4IV ACGT 1 cut(s) 1648
HpyF3I CTNAG 9 cut(s) 435, 631, 660, 763, 865, 1195, 1697, 2066, 2167
HpySE526I ACGT 1 cut(s) 1648
Hsp92I GRCGYC 1 cut(s) 1785
Hsp92II CATG 8 cut(s) 302, 515, 527, 671, 894, 1038, 1506, 2117
HspAI GCGC 2 cut(s) 1377, 2248
Kpn2I TCCGGA 2 cut(s) 74, 1681
LmnI GCTCC 6 cut(s) 579, 1397, 1684, 1693, 2131, 2265
Lsp1109I GCAGC 5 cut(s) 225, 1029, 1343, 2016, 2265
MaeI CTAG 5 cut(s) 110, 243, 1884, 2051, 2300
MaeII ACGT 1 cut(s) 1648
MaeIII GTNAC 7 cut(s) 439, 506, 736, 880, 1100, 1240, 1766
MboII GAAGA 9 cut(s) 59, 90, 273, 452, 1153, 1486, 1651, 1937, 2131
MflI RGATCY 5 cut(s) 457, 1366, 1486, 1686, 1748
MhlI GDGCHC 1 cut(s) 331
MlyI GAGTC 4 cut(s) 262, 1385, 1673, 1763
MmeI TCCRAC 3 cut(s) 621, 1150, 2100
Mph1103I ATGCAT 2 cut(s) 191, 1036
MroI TCCGGA 2 cut(s) 74, 1681
MslI CAYNNNNRTG 2 cut(s) 540, 1817
MspCI CTTAAG 1 cut(s) 530
MspI CCGG 6 cut(s) 38, 75, 205, 1682, 2154, 2172
MspR9I CCNGG 9 cut(s) 150, 206, 311, 923, 1082, 1238, 2057, 2136, 2155
Mva1269I GAATGC 1 cut(s) 1812
MvaI CCWGG 7 cut(s) 150, 311, 923, 1082, 1238, 2057, 2136
MvnI CGCG 1 cut(s) 2293
NciI CCSGG 2 cut(s) 206, 2155
NcoI CCATGG 1 cut(s) 2113
NdeI CATATG 1 cut(s) 2034
NlaIII CATG 8 cut(s) 302, 515, 527, 671, 894, 1038, 1506, 2117
NlaIV GGNNCC 4 cut(s) 1874, 2133, 2159, 2267
NmuCI GTSAC 5 cut(s) 439, 506, 736, 1100, 1766
NruI TCGCGA 1 cut(s) 2293
NsiI ATGCAT 2 cut(s) 191, 1036
NspI RCATGY 2 cut(s) 894, 1038
OliI CACNNNNGTG 1 cut(s) 540
PaeR7I CTCGAG 2 cut(s) 19, 1713
PagI TCATGA 1 cut(s) 298
PceI AGGCCT 1 cut(s) 2055
PctI GAATGC 1 cut(s) 1812
PfoI TCCNGGA 1 cut(s) 148
PinAI ACCGGT 1 cut(s) 37
PkrI GCNGC 9 cut(s) 240, 1044, 1333, 1735, 1738, 1941, 2031, 2280, 2283
Ple19I CGATCG 1 cut(s) 1967
PleI GAGTC 4 cut(s) 261, 1385, 1672, 1763
PpsI GAGTC 4 cut(s) 261, 1385, 1672, 1763
PshAI GACNNNNGTC 1 cut(s) 1251
PsiI TTATAA 1 cut(s) 498
Psp6I CCWGG 7 cut(s) 148, 309, 921, 1080, 1236, 2055, 2134
PspFI CCCAGC 1 cut(s) 2042
PspGI CCWGG 7 cut(s) 148, 309, 921, 1080, 1236, 2055, 2134
PspN4I GGNNCC 4 cut(s) 1874, 2133, 2159, 2267
PspPI GGNCC 1 cut(s) 2011
PspXI VCTCGAGB 1 cut(s) 1713
PstNI CAGNNNCTG 3 cut(s) 449, 1130, 1394
PsuI RGATCY 5 cut(s) 457, 1366, 1486, 1686, 1748
PvuI CGATCG 1 cut(s) 1967
RruI TCGCGA 1 cut(s) 2293
RsaI GTAC 2 cut(s) 226, 1134
RsaNI GTAC 2 cut(s) 225, 1133
RseI CAYNNNNRTG 2 cut(s) 540, 1817
SatI GCNGC 9 cut(s) 239, 1043, 1332, 1734, 1737, 1940, 2030, 2279, 2282
Sau96I GGNCC 1 cut(s) 2011
SchI GAGTC 4 cut(s) 262, 1385, 1673, 1763
ScrFI CCNGG 9 cut(s) 150, 206, 311, 923, 1082, 1238, 2057, 2136, 2155
SduI GDGCHC 1 cut(s) 331
SfcI CTRYAG 1 cut(s) 135
SfiI GGCCNNNNNGGCC 1 cut(s) 2061
Sfr274I CTCGAG 2 cut(s) 19, 1713
SlaI CTCGAG 2 cut(s) 19, 1713
SmiMI CAYNNNNRTG 2 cut(s) 540, 1817
SmlI CTYRAG 5 cut(s) 19, 332, 530, 565, 1713
SmoI CTYRAG 5 cut(s) 19, 332, 530, 565, 1713
SseBI AGGCCT 1 cut(s) 2055
SsiI CCGC 8 cut(s) 54, 1733, 1736, 1801, 1807, 1940, 2110, 2282
SspMI CTAG 5 cut(s) 110, 243, 1884, 2051, 2300
StuI AGGCCT 1 cut(s) 2055
StyD4I CCNGG 9 cut(s) 148, 204, 309, 921, 1080, 1236, 2055, 2134, 2153
StyI CCWWGG 5 cut(s) 242, 1545, 1659, 2113, 2299
TaaI ACNGT 8 cut(s) 136, 144, 224, 506, 1022, 1250, 2094, 2197
TaiI ACGT 1 cut(s) 1651
TaqI TCGA 6 cut(s) 20, 476, 1714, 1834, 1845, 1967
TatI WGTACW 1 cut(s) 1132
TauI GCSGC 4 cut(s) 1736, 1739, 1942, 2284
TscAI CASTG 4 cut(s) 139, 547, 589, 2291
TseFI GTSAC 5 cut(s) 439, 506, 736, 1100, 1766
TseI GCWGC 5 cut(s) 238, 1042, 1331, 2029, 2278
Tsp45I GTSAC 5 cut(s) 439, 506, 736, 1100, 1766
TspDTI ATGAA 7 cut(s) 285, 393, 656, 671, 798, 975, 1569
TspGWI ACGGA 2 cut(s) 1743, 2199
TspRI CASTG 4 cut(s) 139, 547, 589, 2291
Vha464I CTTAAG 1 cut(s) 530
XapI RAATTY 5 cut(s) 553, 1063, 1144, 1510, 1594
XceI RCATGY 2 cut(s) 894, 1038
XhoI CTCGAG 2 cut(s) 19, 1713
XmaJI CCTAGG 2 cut(s) 242, 2299
XspI CTAG 5 cut(s) 110, 243, 1884, 2051, 2300
Zsp2I ATGCAT 2 cut(s) 191, 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.