RLG00000015828

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000551
Physical Location & Seq
Reverse (-)
1697266 .. 1702466
5201 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015828

Sequence Viewer

Length: 1596 bp
ATGGGGGGTATTTGCTCGAGAAAGAGAGACCAACCGGTCATTGAAGAAGGCGGTGTTAGTAGAGTAGTGTCTGGAAGATATTGTAAAAGTAGCAGTTCAAAATGGCTAGGAACTTCGTCTTTTCGTTCCACTGTAGAACAGTCTCCAGGAGTAGCAGGCATTTGCCCATCTCTCTTGGAATTATGCATTTCCAAAATATGCCGGGACATTGACAAATACAGTTCGCTTTCGCTGCTGCCTAGGGATGTGAGTCAGCAAATCTTTAATGAATTGGTCTGTTCCCAATCTCTCACTCATGATTCTCTCCAGGCTTTTAGAGATTGTGCTCTTGAGGATGTTTGTTTGGGCGAATACCCTTCTGTGAATGATAGTTGGATGGATGCCATCTGTTCACAAGGTTCATCTCTACTATCTGTTGATCTTTCTGGTTCTGAGGTGACAGATGCTGGATTGGCTCTTCTAAAAGACTGCTCGAACCTCCAATCATTAACTTATAATTACTGTGACCGTGTTTCAGAACATGGACTTAAGCACATCAGTGGTCTTTCAAATTTGAAATGCTTGAGTTTTAAAAGGAGCAGTGCAATTAGTGCTGAAGGGATGCGCGCTTTCTCCAGCCTTTTTAACTTAGAAAAGTTGGACTTGGAGAGGTGTCCAGAGATTCATGGTGGCTTTGTTCATCTTAAAGGCTTGCAGAAGCTTAATATGTTGAACTTAGAGGGATGCAATGTTACTTCTGCATGTTTGGATTCTATTTCAGCTCTTGTTGCCCTGGCTTACTTAAATCTCAACAGATGCAGTTTATCTGATGAAGGATGTGATAAGTTTTCTGGCCTTACAAACTTGAAGGTTTTGAGCTTGGGATTCAACAGTATCACAGATGCATGTTTGGTGCATCTAAAAGGTTTGACAAATTTGGAGAGCTTGAACCTGGATTCTTGTAAGATAGGTGACGAGGGGCTTGCGAACTTGGCAGGGTTTGTACTCTTGAAGAATTTGGAGTTGTCTGATACTGAAGTTGGAAGCAATGGGATTCGTCATCTCTCAGGGTTAAAGAATCTGGAGAAATTAAACTTGTCGTTCACCCTGGTAACTGACAGTAGTCTGAAAAAGTTATCCGGACTGACATCTCTCAAATCACTTAATCTGGATGCTCGCCAAATTACTGATGCTGGACTTGCAGCTATTACAGGTCTTACAAAATTGACGCATCTGGATCTCTTTGGCGCTCGGATTTCAGACTCTGGAGCAAACTCTTTAAAACACTTCAAGAACCTTCAATCTCTTGAAATATGTGGTGGAGGATTGACTGATGCTGGTGTGAAGAATCTCAAAGATCTTGTCTGTCTGACATGGCTAAATTTGTCGCAGAACTGCAACTTGACTGATAAATCCTTGGAAGTGATTTCTGGTTTGACTGCATTGGTGTCCTTAAACATTTCAAATTCACGCATTACCAATGAGGGATTGCAGTATTTAAAGCCTTTGAAGAATCTACGTTCCTTAACCTTGGAGTCCAGTAAGGTGACTGCATCTGAAATCAGGAAGCTACAGTTTGCTGCCCTCCCTAATCTTGTAAGCTTTCGACCAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_5 LRR_6 LRR_8

Protein Analysis

532

Amino Acids

57.21

Weight (kDa)

6.34

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7885 PF25372 90 - 179 9.3e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
LRR_14 PF23598 152 - 390 4.1e-10 Leucine-rich repeat region
LRR_8 PF13855 258 - 316 1.4e-07 Leucine rich repeat
DUF7885 PF25372 359 - 422 3.3e-06 Leucine Rich Repeat Domain of unknown function (DUF7885)
LRR_14 PF23598 369 - 520 7.9e-08 Leucine-rich repeat region
LRR_8 PF13855 425 - 485 1.1e-07 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000551)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G15740
fragaria_vesca FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_1g02020 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_6g29180 FvH4_7g04581
malus_domestica MD02G1018400.v1.1 MD15G1162400.v1.1 MD17G1217000.v1.1
prunus_persica Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.3G092900_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1 Prupe.7G252400_v2.0.a1
pyrus_communis pycom15g14600 pycom17g22160
rosa_chinensis RchiOBHm_Chr1g0325881 RchiOBHm_Chr2g0087081 RchiOBHm_Chr2g0134401 RchiOBHm_Chr6g0252571
rosa_laevigata RLG00000015828 RLG00000019390
rosa_multiflora Rmu_co8182664.1_g000001 Rmu_sc0005550.1_g000003 Rmu_sc0013657.1_g000009 Rmu_ssc0000064.1_g000031
rosa_roxburghii Rroxscaffold_2G00110270 Rroxscaffold_3G00253750 Rroxscaffold_7G00171870
rosa_rugosa Rorug01G0472200 Rorug01G0472300 Rorug02G0316800 Rorug05G0039000 Rorug05G0039100 Rorug06G0116400
rosa_samantha Rh1DG076800 Rh2AG025600 Rh2AG369200 Rh2BG025300 Rh2BG375300 Rh2CG025900 Rh2CG352900 Rh2CG433900 Rh2DG025800 Rh2DG392400 Rh3DG227300 Rh7BG234800 Rh7CG498200
rosa_wichuraiana Rw1G005860 Rw2G002030 Rw2G030080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 495
AasI GACNNNNNNGTC 1 cut(s) 35
AccII CGCG 1 cut(s) 606
AccIII TCCGGA 1 cut(s) 1118
AciI CCGC 1 cut(s) 51
AclWI GGATC 1 cut(s) 1224
AcsI RAATTY 5 cut(s) 550, 913, 994, 1360, 1444
AcuI CTGAAG 2 cut(s) 615, 1035
AfaI GTAC 1 cut(s) 984
AflII CTTAAG 1 cut(s) 527
AgeI ACCGGT 1 cut(s) 34
AjnI CCWGG 5 cut(s) 145, 306, 771, 930, 1086
AleI CACNNNNGTG 1 cut(s) 537
AluBI AGCT 7 cut(s) 700, 761, 858, 924, 1184, 1549, 1581
AluI AGCT 7 cut(s) 700, 761, 858, 924, 1184, 1549, 1581
Alw21I GWGCWC 1 cut(s) 328
Alw26I GTCTC 2 cut(s) 21, 147
AlwI GGATC 1 cut(s) 1224
AlwNI CAGNNNCTG 2 cut(s) 446, 1244
Ama87I CYCGRG 1 cut(s) 16
Aor13HI TCCGGA 1 cut(s) 1118
AoxI GGCC 1 cut(s) 832
ApeKI GCWGC 4 cut(s) 232, 235, 1181, 1559
ApoI RAATTY 5 cut(s) 550, 913, 994, 1360, 1444
ArsI GACNNNNNNTTYG 2 cut(s) 1326, 1358
AsiGI ACCGGT 1 cut(s) 34
AspA2I CCTAGG 1 cut(s) 239
AspLEI GCGC 3 cut(s) 606, 608, 1229
AsuC2I CCSGG 1 cut(s) 203
AsuHPI GGTGA 4 cut(s) 448, 962, 1075, 1537
AvaI CYCGRG 1 cut(s) 16
AvrII CCTAGG 1 cut(s) 239
BaeI ACNNNNGTAYC 2 cut(s) 1002, 1035
Bbv12I GWGCWC 1 cut(s) 328
BbvI GCAGC 4 cut(s) 219, 222, 1193, 1546
BccI CCATC 3 cut(s) 175, 370, 392
BcgI CGANNNNNNTGC 2 cut(s) 944, 978
BciT130I CCWGG 5 cut(s) 147, 308, 773, 932, 1088
BcnI CCSGG 1 cut(s) 203
BcoDI GTCTC 2 cut(s) 21, 147
BfaI CTAG 2 cut(s) 107, 240
BfmI CTRYAG 2 cut(s) 132, 1550
BfoI RGCGCY 1 cut(s) 1230
BfrI CTTAAG 1 cut(s) 527
BglII AGATCT 1 cut(s) 1336
BisI GCNGC 4 cut(s) 233, 236, 1182, 1560
BlnI CCTAGG 1 cut(s) 239
BlsI GCNGC 4 cut(s) 234, 237, 1183, 1561
Bme1390I CCNGG 6 cut(s) 147, 203, 308, 773, 932, 1088
BmeT110I CYCGRG 1 cut(s) 16
BmrFI CCNGG 6 cut(s) 147, 203, 308, 773, 932, 1088
BoxI GACNNNNGTC 1 cut(s) 1101
BpmI CTGGAG 5 cut(s) 129, 290, 598, 1082, 1266
BpuEI CTTGAG 2 cut(s) 350, 583
BpuMI CCSGG 1 cut(s) 203
BsaI GGTCTC 1 cut(s) 21
BsaJI CCNNGG 5 cut(s) 239, 771, 1086, 1395, 1509
BsaWI WCCGGW 2 cut(s) 34, 1118
Bse118I RCCGGY 1 cut(s) 34
Bse1I ACTGG 1 cut(s) 1518
Bse3DI GCAATG 2 cut(s) 733, 1033
BseAI TCCGGA 1 cut(s) 1118
BseBI CCWGG 5 cut(s) 147, 308, 773, 932, 1088
BseDI CCNNGG 5 cut(s) 239, 771, 1086, 1395, 1509
BseGI GGATG 8 cut(s) 250, 340, 381, 385, 606, 728, 821, 1156
BseMI GCAATG 2 cut(s) 733, 1033
BseMII CTCAG 2 cut(s) 423, 1059
BseNI ACTGG 1 cut(s) 1518
BsePI GCGCGC 1 cut(s) 604
BseXI GCAGC 4 cut(s) 219, 222, 1193, 1546
Bsh1236I CGCG 1 cut(s) 606
BshFI GGCC 1 cut(s) 834
BshTI ACCGGT 1 cut(s) 34
BsiHKAI GWGCWC 1 cut(s) 328
BsiHKCI CYCGRG 1 cut(s) 16
BsiSI CCGG 3 cut(s) 35, 202, 1119
BslFI GGGAC 1 cut(s) 218
BsmAI GTCTC 2 cut(s) 21, 147
BsmFI GGGAC 1 cut(s) 218
BsnI GGCC 1 cut(s) 834
Bso31I GGTCTC 1 cut(s) 21
BsoBI CYCGRG 1 cut(s) 16
Bsp1286I GDGCHC 1 cut(s) 328
Bsp13I TCCGGA 1 cut(s) 1118
Bsp143I GATC 3 cut(s) 418, 1216, 1336
BspACI CCGC 1 cut(s) 51
BspANI GGCC 1 cut(s) 834
BspCNI CTCAG 2 cut(s) 424, 1058
BspEI TCCGGA 1 cut(s) 1118
BspFNI CGCG 1 cut(s) 606
BspHI TCATGA 1 cut(s) 295
BspPI GGATC 1 cut(s) 1224
BspQI GCTCTTC 1 cut(s) 462
BspTI CTTAAG 1 cut(s) 527
BspTNI GGTCTC 1 cut(s) 21
BsrDI GCAATG 2 cut(s) 733, 1033
BsrFI RCCGGY 1 cut(s) 34
BsrI ACTGG 1 cut(s) 1518
BssAI RCCGGY 1 cut(s) 34
BssECI CCNNGG 5 cut(s) 239, 771, 1086, 1395, 1509
BssHII GCGCGC 1 cut(s) 604
BssMI GATC 3 cut(s) 418, 1216, 1336
BssT1I CCWWGG 3 cut(s) 239, 1395, 1509
Bst2UI CCWGG 5 cut(s) 147, 308, 773, 932, 1088
Bst4CI ACNGT 8 cut(s) 133, 141, 221, 503, 509, 872, 1100, 1554
Bst6I CTCTTC 1 cut(s) 462
BstAFI CTTAAG 1 cut(s) 527
BstAPI GCANNNNNTGC 1 cut(s) 590
BstC8I GCNNGC 5 cut(s) 157, 606, 692, 963, 1156
BstDEI CTNAG 4 cut(s) 432, 628, 715, 1045
BstF5I GGATG 8 cut(s) 250, 340, 381, 385, 606, 728, 821, 1156
BstFNI CGCG 1 cut(s) 606
BstH2I RGCGCY 1 cut(s) 1230
BstHHI GCGC 3 cut(s) 606, 608, 1229
BstKTI GATC 3 cut(s) 421, 1219, 1339
BstMAI GTCTC 2 cut(s) 21, 147
BstMBI GATC 3 cut(s) 418, 1216, 1336
BstMWI GCNNNNNNNGC 6 cut(s) 232, 452, 590, 767, 971, 1178
BstNI CCWGG 5 cut(s) 147, 308, 773, 932, 1088
BstNSI RCATGY 2 cut(s) 744, 888
BstPAI GACNNNNGTC 1 cut(s) 1101
BstSCI CCNGG 6 cut(s) 145, 201, 306, 771, 930, 1086
BstSFI CTRYAG 2 cut(s) 132, 1550
BstUI CGCG 1 cut(s) 606
BstV1I GCAGC 4 cut(s) 219, 222, 1193, 1546
BstX2I RGATCY 2 cut(s) 1216, 1336
BstYI RGATCY 2 cut(s) 1216, 1336
BsuRI GGCC 1 cut(s) 834
BtsCI GGATG 8 cut(s) 250, 340, 381, 385, 606, 728, 821, 1156
BtsI GCAGTG 1 cut(s) 586
BtsIMutI CAGTG 3 cut(s) 129, 544, 586
Cac8I GCNNGC 5 cut(s) 157, 606, 692, 963, 1156
CaiI CAGNNNCTG 2 cut(s) 446, 1244
CciI TCATGA 1 cut(s) 295
CfoI GCGC 3 cut(s) 606, 608, 1229
Cfr10I RCCGGY 1 cut(s) 34
CseI GACGC 1 cut(s) 1216
Csp6I GTAC 1 cut(s) 983
CspAI ACCGGT 1 cut(s) 34
CviAII CATG 6 cut(s) 296, 521, 665, 741, 885, 1353
CviQI GTAC 1 cut(s) 983
DdeI CTNAG 4 cut(s) 432, 628, 715, 1045
DpnI GATC 3 cut(s) 420, 1218, 1338
DpnII GATC 3 cut(s) 418, 1216, 1336
DraI TTTAAA 3 cut(s) 571, 1260, 1479
DrdI GACNNNNNNGTC 1 cut(s) 35
DseDI GACNNNNNNGTC 1 cut(s) 35
Eam1104I CTCTTC 1 cut(s) 462
EarI CTCTTC 1 cut(s) 462
Eco130I CCWWGG 3 cut(s) 239, 1395, 1509
Eco31I GGTCTC 1 cut(s) 21
Eco57I CTGAAG 2 cut(s) 615, 1035
Eco88I CYCGRG 1 cut(s) 16
EcoRII CCWGG 5 cut(s) 145, 306, 771, 930, 1086
EcoT14I CCWWGG 3 cut(s) 239, 1395, 1509
EcoT22I ATGCAT 2 cut(s) 188, 886
ErhI CCWWGG 3 cut(s) 239, 1395, 1509
FaeI CATG 6 cut(s) 299, 524, 668, 744, 888, 1356
FalI AAGNNNNNCTT 2 cut(s) 626, 658
FaqI GGGAC 1 cut(s) 218
FatI CATG 6 cut(s) 295, 520, 664, 740, 884, 1352
Fnu4HI GCNGC 4 cut(s) 233, 236, 1182, 1560
FokI GGATG 8 cut(s) 257, 347, 388, 392, 613, 735, 828, 1163
Fsp4HI GCNGC 4 cut(s) 233, 236, 1182, 1560
FspBI CTAG 2 cut(s) 107, 240
GlaI GCGC 3 cut(s) 605, 607, 1228
GluI GCNGC 4 cut(s) 233, 236, 1182, 1560
GsuI CTGGAG 5 cut(s) 129, 290, 598, 1082, 1266
HaeII RGCGCY 1 cut(s) 1230
HaeIII GGCC 1 cut(s) 834
HapII CCGG 3 cut(s) 35, 202, 1119
HgaI GACGC 1 cut(s) 1216
HhaI GCGC 3 cut(s) 606, 608, 1229
Hin1II CATG 6 cut(s) 299, 524, 668, 744, 888, 1356
Hin6I GCGC 3 cut(s) 604, 606, 1227
HinP1I GCGC 3 cut(s) 604, 606, 1227
HindIII AAGCTT 2 cut(s) 698, 1579
HpaII CCGG 3 cut(s) 35, 202, 1119
HphI GGTGA 4 cut(s) 448, 962, 1075, 1537
Hpy166II GTNNAC 2 cut(s) 392, 1083
Hpy188I TCNGA 9 cut(s) 433, 517, 808, 1009, 1107, 1233, 1240, 1350, 1537
Hpy8I GTNNAC 2 cut(s) 392, 1083
HpyAV CCTTC 6 cut(s) 41, 366, 590, 806, 841, 1286
HpyCH4III ACNGT 8 cut(s) 133, 141, 221, 503, 509, 872, 1100, 1554
HpyCH4IV ACGT 1 cut(s) 1498
HpyF10VI GCNNNNNNNGC 6 cut(s) 232, 452, 590, 767, 971, 1178
HpyF3I CTNAG 4 cut(s) 432, 628, 715, 1045
HpySE526I ACGT 1 cut(s) 1498
Hsp92II CATG 6 cut(s) 299, 524, 668, 744, 888, 1356
HspAI GCGC 3 cut(s) 604, 606, 1227
Kpn2I TCCGGA 1 cut(s) 1118
Kzo9I GATC 3 cut(s) 418, 1216, 1336
LguI GCTCTTC 1 cut(s) 462
LmnI GCTCC 2 cut(s) 576, 1247
Lsp1109I GCAGC 4 cut(s) 219, 222, 1193, 1546
MaeI CTAG 2 cut(s) 107, 240
MaeII ACGT 1 cut(s) 1498
MaeIII GTNAC 6 cut(s) 436, 503, 730, 950, 1090, 1525
MalI GATC 3 cut(s) 420, 1218, 1338
MboI GATC 3 cut(s) 418, 1216, 1336
MboII GAAGA 6 cut(s) 56, 87, 449, 1003, 1336, 1501
MflI RGATCY 2 cut(s) 1216, 1336
MhlI GDGCHC 1 cut(s) 328
MlyI GAGTC 3 cut(s) 259, 1235, 1523
MmeI TCCRAC 3 cut(s) 353, 618, 1000
MnlI CCTC 9 cut(s) 325, 427, 488, 642, 712, 949, 1295, 1456, 1574
Mph1103I ATGCAT 2 cut(s) 188, 886
MroI TCCGGA 1 cut(s) 1118
MslI CAYNNNNRTG 1 cut(s) 537
MspCI CTTAAG 1 cut(s) 527
MspI CCGG 3 cut(s) 35, 202, 1119
MspR9I CCNGG 6 cut(s) 147, 203, 308, 773, 932, 1088
MvaI CCWGG 5 cut(s) 147, 308, 773, 932, 1088
MvnI CGCG 1 cut(s) 606
MwoI GCNNNNNNNGC 6 cut(s) 232, 452, 590, 767, 971, 1178
NciI CCSGG 1 cut(s) 203
NdeII GATC 3 cut(s) 418, 1216, 1336
NlaIII CATG 6 cut(s) 299, 524, 668, 744, 888, 1356
NmuCI GTSAC 4 cut(s) 436, 503, 950, 1525
NsiI ATGCAT 2 cut(s) 188, 886
NspI RCATGY 2 cut(s) 744, 888
OliI CACNNNNGTG 1 cut(s) 537
PaeR7I CTCGAG 1 cut(s) 16
PagI TCATGA 1 cut(s) 295
PauI GCGCGC 1 cut(s) 604
PciSI GCTCTTC 1 cut(s) 462
PfeI GAWTC 9 cut(s) 299, 661, 749, 864, 935, 1033, 1057, 1327, 1492
PfoI TCCNGGA 1 cut(s) 145
PinAI ACCGGT 1 cut(s) 34
PkrI GCNGC 4 cut(s) 234, 237, 1183, 1561
PleI GAGTC 3 cut(s) 258, 1235, 1522
PpsI GAGTC 3 cut(s) 258, 1235, 1522
PshAI GACNNNNGTC 1 cut(s) 1101
PsiI TTATAA 1 cut(s) 495
Psp6I CCWGG 5 cut(s) 145, 306, 771, 930, 1086
PspGI CCWGG 5 cut(s) 145, 306, 771, 930, 1086
PstNI CAGNNNCTG 2 cut(s) 446, 1244
PsuI RGATCY 2 cut(s) 1216, 1336
PteI GCGCGC 1 cut(s) 604
RsaI GTAC 1 cut(s) 984
RsaNI GTAC 1 cut(s) 983
RseI CAYNNNNRTG 1 cut(s) 537
SapI GCTCTTC 1 cut(s) 462
SatI GCNGC 4 cut(s) 233, 236, 1182, 1560
Sau3AI GATC 3 cut(s) 418, 1216, 1336
SchI GAGTC 3 cut(s) 259, 1235, 1523
ScrFI CCNGG 6 cut(s) 147, 203, 308, 773, 932, 1088
SduI GDGCHC 1 cut(s) 328
SfcI CTRYAG 2 cut(s) 132, 1550
Sfr274I CTCGAG 1 cut(s) 16
SlaI CTCGAG 1 cut(s) 16
SmiMI CAYNNNNRTG 1 cut(s) 537
SmlI CTYRAG 4 cut(s) 16, 329, 527, 562
SmoI CTYRAG 4 cut(s) 16, 329, 527, 562
SsiI CCGC 1 cut(s) 51
SspMI CTAG 2 cut(s) 107, 240
StyD4I CCNGG 6 cut(s) 145, 201, 306, 771, 930, 1086
StyI CCWWGG 3 cut(s) 239, 1395, 1509
TaaI ACNGT 8 cut(s) 133, 141, 221, 503, 509, 872, 1100, 1554
TaiI ACGT 1 cut(s) 1501
TaqI TCGA 3 cut(s) 17, 473, 1585
TatI WGTACW 1 cut(s) 982
TfiI GAWTC 9 cut(s) 299, 661, 749, 864, 935, 1033, 1057, 1327, 1492
TscAI CASTG 3 cut(s) 136, 544, 586
TseFI GTSAC 4 cut(s) 436, 503, 950, 1525
TseI GCWGC 4 cut(s) 232, 235, 1181, 1559
Tsp45I GTSAC 4 cut(s) 436, 503, 950, 1525
TspDTI ATGAA 5 cut(s) 282, 390, 653, 668, 825
TspRI CASTG 3 cut(s) 136, 544, 586
Vha464I CTTAAG 1 cut(s) 527
XapI RAATTY 5 cut(s) 550, 913, 994, 1360, 1444
XceI RCATGY 2 cut(s) 744, 888
XhoI CTCGAG 1 cut(s) 16
XmaJI CCTAGG 1 cut(s) 239
XspI CTAG 2 cut(s) 107, 240
Zsp2I ATGCAT 2 cut(s) 188, 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.