FvH4_6g41730

Protein GAMETE EXPRESSED

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
32730200 .. 32732753
2554 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g41730.t1

Sequence Viewer

Length: 1776 bp
ATGGGTCGATTCAAATCTCTTCTTTTCATGTTGATCATCCTAACTCTATCAAGGTCTTGTATGTGTTGGTGGTTCTCTTCTTCTTCTAGCAAGACTACTAGCCATAAACCTCAAGAAACTCTGCAGATATCTGGTGATGTTCCGGTTATATTCTCCATGGAAGCTTTCCACGATCAAAGGGCAATTCAAAGGAAGGAAGTAGCTGATAGAAGAAAACTTGAATCTTGTTGGTTTGATGCTTACAGAGGACTATTTGCAGCATGCTCCGAAATTTCGAGCGACAAGAATGACATGAAGAAGAGGTTTTCTTGGGAACTAAGCAACTGCTTTCAGAGGGAAATCGGAAGGCCTCCTTTTCCTACATGCCGTGAAGGCTCTCCGATGAAAGATTGCCTTGCGAAATTGGATGACAATGCTATTGAGACTTACAGGGCATTTTTCATAGAGACTGACTCTATTTGCTTTCAGTTACAGTCTCATGTATTTAGGGCTGAGACAGAGAAGTTGGTGAATCAATTGGTGAAGTCAGCTGATTATGCAGAGGAAAAACTAGAAACCATAGCAGAACAATCAGAGAAATTGTTGGAGGGCTCAAAAGTTATACACATATCTTTGAGTGCAATCGACAGACAGACACAAGAAATGGCTCAATCTTCCAAGAAAGTTGGTGATCAAATTGGTAATATAGTGAAGCGGTCAGAGGTAATGTTTGAGCAATCTGTGAAACTTGCTGCCTCTCAGTTAGAATTGAAAAATGGGCAAGACAAACTGAAGGAAAATTTGCAAGAGGGCATGGAAGTGATACATGAGTCTTATCATGCTCTAGGTAAGGAAATACACAGTCTACAGAATGAGACTATTGAAATAGAGAAGAAGATAACCGAAGTTGGCGACACTGTGTCTACAAAGATGAACAGCCTGCAAAGTAAGGCTGATGATATTAGCAATGTGACAGAAATTTCCTTGGAAAAGCAAAAAAAACTTCTGGAAGGTCAATCCGAAGCTCTTAGATTCCAGGTTAATGCTCTAGAAGAGAGCAGAGGTATTTTGCAGCAATTGGCTAAATTTGGTCGTGAACAGCAAGAAGAACTTCTTCGGCAACAGGAACAGATTAAACAAGGCCATGACAATCTGGTCAAAAATTCAAGGTCCATATTGGCAGCTCAGGAAGCTTTTGAACAAAAGCAAGAAACCATGTTTGTTGCTTTGGATAAGCTATTCATATTGCACAATGCCTTGTTGGTCGAATCAAGATCAATCAAAGTTTTCTTTCTGTATTCCATATCGATGTTTGTCATCTACTTGTCGACTAGCACAAAGCAAACTTACAAAGTGAGACCTATTCTTTACATAGGTCTATGCGTTGCATTTTCGATTGAATTAGCAATGCTTCGATTATCAACAAGTGGAGTAGAGCAGCAGGCTATGATTGTCAATGGAATTAGGCTCCTTTATCTGTTGTTTTCTTTAGTTCTGGTAGTCTACGCCGCCTTCACATATAGGGACTATGAAATGCTGAACTACAACATGCTGAAAAATCTGACAGATGAGTTCCTAAAGTTTCAGAAAAATGCTGCTTCGCCATGGGACAACAATGACTCATCAGATGATGATCAAGATGACTCAGACTGGGTTACATCGGTTGACACTGGCGTAGATGATGGCATTGAAGATCTATTGGAGTACTCCTCCAGTCATTTACAAGAGGAGGTTGGAGATAATTCAAATCTAATCTCTTCGGTTACTAGAAGATATAATCTCCGCGGTGGTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

592

Amino Acids

67.57

Weight (kDa)

5.28

Isoelectric Point (pI)

56.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1133
AccI GTMKAC 4 cut(s) 844, 902, 1307, 1482
AccII CGCG 1 cut(s) 1764
AciI CCGC 4 cut(s) 694, 1488, 1762, 1764
AcsI RAATTY 5 cut(s) 270, 778, 957, 1064, 1141
AcuI CTGAAG 1 cut(s) 791
AfaI GTAC 1 cut(s) 1685
AhdI GACNNNNNGTC 1 cut(s) 898
AjnI CCWGG 1 cut(s) 1014
AluBI AGCT 7 cut(s) 164, 203, 530, 1004, 1163, 1172, 1216
AluI AGCT 7 cut(s) 164, 203, 530, 1004, 1163, 1172, 1216
Alw26I GTCTC 6 cut(s) 416, 440, 480, 488, 848, 1330
AoxI GGCC 2 cut(s) 347, 1120
ApeKI GCWGC 6 cut(s) 257, 731, 1051, 1160, 1417, 1574
ApoI RAATTY 5 cut(s) 270, 778, 957, 1064, 1141
Asp700I GAANNNNTTC 2 cut(s) 1089, 1092
AspS9I GGNCC 1 cut(s) 1149
AsuHPI GGTGA 4 cut(s) 146, 520, 532, 680
AvaII GGWCC 1 cut(s) 1149
BaeI ACNNNNGTAYC 2 cut(s) 794, 827
BanII GRGCYC 1 cut(s) 593
BbvI GCAGC 6 cut(s) 269, 718, 1063, 1172, 1429, 1561
BccI CCATC 1 cut(s) 1655
BceAI ACGGC 1 cut(s) 351
BciT130I CCWGG 1 cut(s) 1016
BclI TGATCA 3 cut(s) 33, 670, 1612
BcoDI GTCTC 6 cut(s) 416, 440, 480, 488, 848, 1330
BfaI CTAG 7 cut(s) 87, 99, 551, 824, 1028, 1311, 1746
BfmI CTRYAG 2 cut(s) 122, 845
BglI GCCNNNNNGGC 1 cut(s) 372
BglII AGATCT 1 cut(s) 1672
BisI GCNGC 7 cut(s) 258, 732, 1052, 1161, 1418, 1488, 1575
BlsI GCNGC 7 cut(s) 259, 733, 1053, 1162, 1419, 1489, 1576
BmcAI AGTACT 1 cut(s) 1685
Bme1390I CCNGG 1 cut(s) 1016
Bme18I GGWCC 1 cut(s) 1149
BmeRI GACNNNNNGTC 1 cut(s) 898
BmgT120I GGNCC 1 cut(s) 1149
BmiI GGNNCC 1 cut(s) 1448
BmrFI CCNGG 1 cut(s) 1016
BmrI ACTGGG 1 cut(s) 1639
BmsI GCATC 1 cut(s) 226
BmuI ACTGGG 1 cut(s) 1639
BplI GAGNNNNNCTC 4 cut(s) 437, 469, 1673, 1705
BpmI CTGGAG 1 cut(s) 1675
Bpu10I CCTNAGC 1 cut(s) 1164
BpuEI CTTGAG 1 cut(s) 96
Bsa29I ATCGAT 1 cut(s) 1286
BsaBI GATNNNNATC 2 cut(s) 13, 1611
BsaI GGTCTC 1 cut(s) 1330
BsaJI CCNNGG 4 cut(s) 156, 963, 1583, 1762
BsaWI WCCGGW 1 cut(s) 142
Bse1I ACTGG 3 cut(s) 1634, 1654, 1692
Bse3DI GCAATG 2 cut(s) 952, 1392
Bse8I GATNNNNATC 2 cut(s) 13, 1611
BseBI CCWGG 1 cut(s) 1016
BseCI ATCGAT 1 cut(s) 1286
BseDI CCNNGG 4 cut(s) 156, 963, 1583, 1762
BseGI GGATG 2 cut(s) 36, 412
BseJI GATNNNNATC 2 cut(s) 13, 1611
BseMI GCAATG 2 cut(s) 952, 1392
BseMII CTCAG 4 cut(s) 483, 752, 1178, 1638
BseNI ACTGG 3 cut(s) 1634, 1654, 1692
BseRI GAGGAG 2 cut(s) 1678, 1721
BseXI GCAGC 6 cut(s) 269, 718, 1063, 1172, 1429, 1561
Bsh1236I CGCG 1 cut(s) 1764
BshFI GGCC 2 cut(s) 349, 1122
BshVI ATCGAT 1 cut(s) 1286
BsiSI CCGG 1 cut(s) 143
BslFI GGGAC 2 cut(s) 1517, 1601
BsmAI GTCTC 6 cut(s) 416, 440, 480, 488, 848, 1330
BsmFI GGGAC 2 cut(s) 1517, 1601
BsnI GGCC 2 cut(s) 349, 1122
Bso31I GGTCTC 1 cut(s) 1330
Bsp1286I GDGCHC 1 cut(s) 593
Bsp143I GATC 6 cut(s) 33, 172, 670, 1253, 1612, 1672
Bsp19I CCATGG 2 cut(s) 156, 1583
BspACI CCGC 4 cut(s) 694, 1488, 1762, 1764
BspANI GGCC 2 cut(s) 349, 1122
BspCNI CTCAG 4 cut(s) 484, 751, 1177, 1637
BspDI ATCGAT 1 cut(s) 1286
BspFNI CGCG 1 cut(s) 1764
BspLI GGNNCC 1 cut(s) 1448
BspMAI CTGCAG 1 cut(s) 126
BspTNI GGTCTC 1 cut(s) 1330
BsrDI GCAATG 2 cut(s) 952, 1392
BsrI ACTGG 3 cut(s) 1634, 1654, 1692
BssECI CCNNGG 4 cut(s) 156, 963, 1583, 1762
BssMI GATC 6 cut(s) 33, 172, 670, 1253, 1612, 1672
BssT1I CCWWGG 3 cut(s) 156, 963, 1583
Bst2UI CCWGG 1 cut(s) 1016
Bst4CI ACNGT 3 cut(s) 474, 842, 898
Bst6I CTCTTC 5 cut(s) 24, 82, 293, 1026, 1741
BstC8I GCNNGC 3 cut(s) 262, 920, 1422
BstDEI CTNAG 6 cut(s) 317, 492, 738, 1007, 1164, 1624
BstDSI CCRYGG 3 cut(s) 156, 1583, 1762
BstF5I GGATG 2 cut(s) 36, 412
BstFNI CGCG 1 cut(s) 1764
BstKTI GATC 6 cut(s) 36, 175, 673, 1256, 1615, 1675
BstMAI GTCTC 6 cut(s) 416, 440, 480, 488, 848, 1330
BstMBI GATC 6 cut(s) 33, 172, 670, 1253, 1612, 1672
BstMWI GCNNNNNNNGC 3 cut(s) 372, 536, 1169
BstNI CCWGG 1 cut(s) 1016
BstNSI RCATGY 3 cut(s) 264, 366, 1531
BstSCI CCNGG 1 cut(s) 1014
BstSFI CTRYAG 2 cut(s) 122, 845
BstUI CGCG 1 cut(s) 1764
BstV1I GCAGC 6 cut(s) 269, 718, 1063, 1172, 1429, 1561
BstX2I RGATCY 1 cut(s) 1672
BstYI RGATCY 1 cut(s) 1672
Bsu15I ATCGAT 1 cut(s) 1286
BsuRI GGCC 2 cut(s) 349, 1122
BsuTUI ATCGAT 1 cut(s) 1286
BtgI CCRYGG 3 cut(s) 156, 1583, 1762
BtsCI GGATG 2 cut(s) 36, 412
BtsIMutI CAGTG 2 cut(s) 894, 1647
Cac8I GCNNGC 3 cut(s) 262, 920, 1422
Cfr13I GGNCC 1 cut(s) 1149
Cfr42I CCGCGG 1 cut(s) 1765
ClaI ATCGAT 1 cut(s) 1286
Csp6I GTAC 1 cut(s) 1684
CviQI GTAC 1 cut(s) 1684
DdeI CTNAG 6 cut(s) 317, 492, 738, 1007, 1164, 1624
DpnI GATC 6 cut(s) 35, 174, 672, 1255, 1614, 1674
DpnII GATC 6 cut(s) 33, 172, 670, 1253, 1612, 1672
DrdI GACNNNNNNGTC 1 cut(s) 1133
DriI GACNNNNNGTC 1 cut(s) 898
DseDI GACNNNNNNGTC 1 cut(s) 1133
Eam1104I CTCTTC 5 cut(s) 24, 82, 293, 1026, 1741
Eam1105I GACNNNNNGTC 1 cut(s) 898
EarI CTCTTC 5 cut(s) 24, 82, 293, 1026, 1741
Eco130I CCWWGG 3 cut(s) 156, 963, 1583
Eco147I AGGCCT 1 cut(s) 349
Eco24I GRGCYC 1 cut(s) 593
Eco31I GGTCTC 1 cut(s) 1330
Eco32I GATATC 1 cut(s) 129
Eco47I GGWCC 1 cut(s) 1149
Eco57I CTGAAG 1 cut(s) 791
EcoRII CCWGG 1 cut(s) 1014
EcoRV GATATC 1 cut(s) 129
EcoT14I CCWWGG 3 cut(s) 156, 963, 1583
EcoT38I GRGCYC 1 cut(s) 593
ErhI CCWWGG 3 cut(s) 156, 963, 1583
FalI AAGNNNNNCTT 8 cut(s) 337, 369, 378, 410, 1074, 1106, 1077, 1109
FaqI GGGAC 2 cut(s) 1517, 1601
FbaI TGATCA 3 cut(s) 33, 670, 1612
FblI GTMKAC 4 cut(s) 844, 902, 1307, 1482
Fnu4HI GCNGC 7 cut(s) 258, 732, 1052, 1161, 1418, 1488, 1575
FokI GGATG 2 cut(s) 23, 419
FriOI GRGCYC 1 cut(s) 593
Fsp4HI GCNGC 7 cut(s) 258, 732, 1052, 1161, 1418, 1488, 1575
FspBI CTAG 7 cut(s) 87, 99, 551, 824, 1028, 1311, 1746
GluI GCNGC 7 cut(s) 258, 732, 1052, 1161, 1418, 1488, 1575
GsuI CTGGAG 1 cut(s) 1675
HaeIII GGCC 2 cut(s) 349, 1122
HapII CCGG 1 cut(s) 143
HincII GTYRAC 2 cut(s) 1308, 1645
HindII GTYRAC 2 cut(s) 1308, 1645
HindIII AAGCTT 2 cut(s) 162, 1170
HinfI GANTC 9 cut(s) 9, 221, 452, 511, 809, 1011, 1247, 1598, 1622
HpaII CCGG 1 cut(s) 143
HphI GGTGA 4 cut(s) 146, 520, 532, 680
Hpy166II GTNNAC 6 cut(s) 845, 903, 1076, 1308, 1483, 1645
Hpy188III TCNNGA 7 cut(s) 113, 986, 1028, 1073, 1166, 1251, 1616
Hpy8I GTNNAC 6 cut(s) 845, 903, 1076, 1308, 1483, 1645
HpyAV CCTTC 6 cut(s) 187, 339, 365, 766, 983, 1501
HpyCH4III ACNGT 3 cut(s) 474, 842, 898
HpyCH4V TGCA 9 cut(s) 124, 257, 539, 620, 784, 922, 1051, 1228, 1367
HpyF10VI GCNNNNNNNGC 3 cut(s) 372, 536, 1169
HpyF3I CTNAG 6 cut(s) 317, 492, 738, 1007, 1164, 1624
Ksp22I TGATCA 3 cut(s) 33, 670, 1612
KspI CCGCGG 1 cut(s) 1765
Kzo9I GATC 6 cut(s) 33, 172, 670, 1253, 1612, 1672
LmnI GCTCC 2 cut(s) 269, 1452
Lsp1109I GCAGC 6 cut(s) 269, 718, 1063, 1172, 1429, 1561
LweI GCATC 1 cut(s) 226
MaeI CTAG 7 cut(s) 87, 99, 551, 824, 1028, 1311, 1746
MaeIII GTNAC 4 cut(s) 468, 949, 1633, 1741
MalI GATC 6 cut(s) 35, 174, 672, 1255, 1614, 1674
MboI GATC 6 cut(s) 33, 172, 670, 1253, 1612, 1672
MfeI CAATTG 2 cut(s) 515, 1055
MflI RGATCY 1 cut(s) 1672
MhlI GDGCHC 1 cut(s) 593
MlyI GAGTC 4 cut(s) 446, 818, 1592, 1616
MmeI TCCRAC 2 cut(s) 564, 1693
MroXI GAANNNNTTC 2 cut(s) 1089, 1092
MseI TTAA 3 cut(s) 1020, 1113, 1774
MslI CAYNNNNRTG 2 cut(s) 797, 1286
MspA1I CMGCKG 2 cut(s) 530, 1764
MspI CCGG 1 cut(s) 143
MspR9I CCNGG 1 cut(s) 1016
MunI CAATTG 2 cut(s) 515, 1055
MvaI CCWGG 1 cut(s) 1016
MvnI CGCG 1 cut(s) 1764
MwoI GCNNNNNNNGC 3 cut(s) 372, 536, 1169
NcoI CCATGG 2 cut(s) 156, 1583
NdeII GATC 6 cut(s) 33, 172, 670, 1253, 1612, 1672
NlaIV GGNNCC 1 cut(s) 1448
NmuCI GTSAC 1 cut(s) 949
NspI RCATGY 3 cut(s) 264, 366, 1531
PaeI GCATGC 1 cut(s) 264
PceI AGGCCT 1 cut(s) 349
PdmI GAANNNNTTC 2 cut(s) 1089, 1092
PfeI GAWTC 5 cut(s) 9, 221, 511, 1011, 1247
PkrI GCNGC 7 cut(s) 259, 733, 1053, 1162, 1419, 1489, 1576
PleI GAGTC 4 cut(s) 446, 817, 1592, 1616
PpsI GAGTC 4 cut(s) 446, 817, 1592, 1616
Psp6I CCWGG 1 cut(s) 1014
PspGI CCWGG 1 cut(s) 1014
PspN4I GGNNCC 1 cut(s) 1448
PspPI GGNCC 1 cut(s) 1149
PstI CTGCAG 1 cut(s) 126
PsuI RGATCY 1 cut(s) 1672
PvuII CAGCTG 1 cut(s) 530
RsaI GTAC 1 cut(s) 1685
RsaNI GTAC 1 cut(s) 1684
RseI CAYNNNNRTG 2 cut(s) 797, 1286
SacII CCGCGG 1 cut(s) 1765
SalI GTCGAC 1 cut(s) 1306
SaqAI TTAA 3 cut(s) 1020, 1113, 1774
SatI GCNGC 7 cut(s) 258, 732, 1052, 1161, 1418, 1488, 1575
Sau3AI GATC 6 cut(s) 33, 172, 670, 1253, 1612, 1672
Sau96I GGNCC 1 cut(s) 1149
ScaI AGTACT 1 cut(s) 1685
SchI GAGTC 4 cut(s) 446, 818, 1592, 1616
ScrFI CCNGG 1 cut(s) 1016
SduI GDGCHC 1 cut(s) 593
SfaNI GCATC 1 cut(s) 226
SfcI CTRYAG 2 cut(s) 122, 845
Sfr303I CCGCGG 1 cut(s) 1765
SgrBI CCGCGG 1 cut(s) 1765
SinI GGWCC 1 cut(s) 1149
SmiMI CAYNNNNRTG 2 cut(s) 797, 1286
SmlI CTYRAG 1 cut(s) 111
SmoI CTYRAG 1 cut(s) 111
SphI GCATGC 1 cut(s) 264
SseBI AGGCCT 1 cut(s) 349
SsiI CCGC 4 cut(s) 694, 1488, 1762, 1764
SspMI CTAG 7 cut(s) 87, 99, 551, 824, 1028, 1311, 1746
StuI AGGCCT 1 cut(s) 349
StyD4I CCNGG 1 cut(s) 1014
StyI CCWWGG 3 cut(s) 156, 963, 1583
TaaI ACNGT 3 cut(s) 474, 842, 898
TaqI TCGA 8 cut(s) 7, 275, 624, 1245, 1286, 1307, 1373, 1393
TatI WGTACW 1 cut(s) 1683
TauI GCSGC 1 cut(s) 1490
TfiI GAWTC 5 cut(s) 9, 221, 511, 1011, 1247
Tru1I TTAA 3 cut(s) 1020, 1113, 1774
Tru9I TTAA 3 cut(s) 1020, 1113, 1774
TscAI CASTG 2 cut(s) 901, 1654
TseFI GTSAC 1 cut(s) 949
TseI GCWGC 6 cut(s) 257, 731, 1051, 1160, 1417, 1574
Tsp45I GTSAC 1 cut(s) 949
TspDTI ATGAA 7 cut(s) 16, 308, 398, 430, 926, 1210, 1524
TspRI CASTG 2 cut(s) 901, 1654
VpaK11BI GGWCC 1 cut(s) 1149
XapI RAATTY 5 cut(s) 270, 778, 957, 1064, 1141
XbaI TCTAGA 1 cut(s) 1027
XceI RCATGY 3 cut(s) 264, 366, 1531
XmiI GTMKAC 4 cut(s) 844, 902, 1307, 1482
XmnI GAANNNNTTC 2 cut(s) 1089, 1092
XspI CTAG 7 cut(s) 87, 99, 551, 824, 1028, 1311, 1746
ZrmI AGTACT 1 cut(s) 1685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.