Rh1CG268300

Protein GAMETE EXPRESSED

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
53306709 .. 53312565
5857 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG268300.1

Sequence Viewer

Length: 1629 bp
ATGGTGCACACAGATGCTAGGTTTGCGGTCGGTGTGGTTGGGAATGTCATCTCTGGCGGCCTTTTCCTCTCCCCAATTCCTACGTTCATACAAATATGGAGAAAAAAAGATGTGGAAGCTTTCGATCCAAGACCATACCTTACAACAGTGTTAAACTGTTTGTTCTGGTGTTACTACGGATTGCCATTTGTTAACCCAAATAGCATTTTAGTTGTCACTATTAATGGAATTGGGCTATTTATAGAGCTCATATATCTTGTCATATTCTTCTATTATGCCGCAGCAAAAGGACGAAAGAGGGTTGCTACATACTTTATATGTGAACTTATTTTATTTGGGGCTTTGGTGGCTGCAACTATGTTGGCAATACCTGAGCATAAGATGGCGATGAATCGACCTTTGAGGGCTGTCGTAGTTGGTGTGATATGTGATTTTTTCAATGTCCTCATGTATGGCTCTCCTTTGTTCAACGTGAGAGATGTCATTAAAACTAAGAGTGTGAAATATATGCCATTCACTCTCCTAGTGGCCAACTTCCTGAATGGTTGTTGCTGGACATCCTATGCTCTCATTGGAAAAGTGGACTACTTCATTTTGATTAGCAACGGTCTCGGCGCAATTTTTGGGGCATTTCAATTGATAGTTTATGCAAGATACTACAAAACTACACCAAAAGATGAAGACCTCTCTGGCAAGACTACTAATGAAGTGCAACTCTCTCAGTATGCAGAAGGCAAGTTGGAAATAATTGAAGAGAAGGCAGAGCATCTACTGCAGGGGTCAAATCAAATATTTGAGTCTTTGAATTCGATTGATCTTCGAACACAGCAAGTTGCTCAGACTGCACAGAATGTGGAAGATCATATAGATGTGGTGTTGAAGCATTCCGCAGCAGTTTATGAGCAATCAAGGAAAATCCAAGATTCTCAATCTGAGCTGCAAGAAGGACAAGTAGAAATGAAGAAAAATTTGAAGGAAGGAATGGCAATGTTGCAGGATTCATACAGCCATTTGGGACAAGAAATCGATAACTTGAAAAATGAAGCTGTTGAAGTTGAAAAAGAGATAACCAAAGTCGGAGACCAAATGTCGTCTAGGATGGAGAATCTGCAGGTCAAAGCAGATGACATTAGGAATATGGCAGGGCTCTCTTTGGACAAGCAAAAGCAGCTTCTAGATGGACAAACAACAGCTCTCAAGGAGCTCGACTTTTTAACCAAATTTCAATCCGAGGCACTAGAAGAGAGCAGGAAAACCCTACAACGGTTAACTGAATATGGTCACAGACAACAAGAAGAGCTTCTTCAGAAGCAACTACAGCTTCAAAAAGTTCATGATCACCTGATGGAAAACTCAAAGTCAATGTTGGAGGCACAGGAATCTTTTGAATCAAAGCAAGCCAGCATGTTCACCGCATTAGACAAGCTATTGGCTTTGCACAATGCTATGCTGCTTGAATCACGGTTGATCAAAGCTTTCTTTATTTACTCTATATCAATCTTTGCTATCTACATGTTCACAAGCACAAAGCGAACATACACAGTTAGACCTCGGCTATATATCGGGCTGTGTTTGACTCTCTTAGTAGAAGTAGCAATACTTCGGCTCACAGGGCATGATATTGAATAG

Protein Analysis

542

Amino Acids

61.61

Weight (kDa)

6.18

Isoelectric Point (pI)

44.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MtN3_slv PF03083 9 - 95 4.8e-21 Sugar efflux transporter for intercellular exchange
MtN3_slv PF03083 138 - 222 3.3e-21 Sugar efflux transporter for intercellular exchange
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1102
AciI CCGC 5 cut(s) 26, 57, 279, 888, 1413
AclWI GGATC 1 cut(s) 119
AcoI YGGCCR 1 cut(s) 528
AcsI RAATTY 3 cut(s) 805, 967, 1220
AcuI CTGAAG 1 cut(s) 1289
AfiI CCNNNNNNNGG 1 cut(s) 1263
AflIII ACRYGT 1 cut(s) 1512
AhdI GACNNNNNGTC 1 cut(s) 1087
Alw21I GWGCWC 3 cut(s) 9, 249, 1206
Alw26I GTCTC 2 cut(s) 614, 1074
Alw44I GTGCAC 1 cut(s) 5
AlwI GGATC 1 cut(s) 119
AoxI GGCC 2 cut(s) 58, 528
ApaLI GTGCAC 1 cut(s) 5
ApeKI GCWGC 6 cut(s) 281, 350, 890, 937, 1168, 1450
ApoI RAATTY 3 cut(s) 805, 967, 1220
AseI ATTAAT 1 cut(s) 222
Asp700I GAANNNNTTC 1 cut(s) 1299
AspLEI GCGC 1 cut(s) 617
AsuHPI GGTGA 2 cut(s) 1331, 1402
AsuII TTCGAA 1 cut(s) 820
BaeGI GKGCMC 1 cut(s) 9
BalI TGGCCA 1 cut(s) 530
BanII GRGCYC 3 cut(s) 249, 1149, 1206
BarI GAAGNNNNNNTAC 4 cut(s) 1581, 1584, 1613, 1616
BbsI GAAGAC 1 cut(s) 687
Bbv12I GWGCWC 3 cut(s) 9, 249, 1206
BbvI GCAGC 6 cut(s) 293, 337, 902, 924, 1180, 1437
BccI CCATC 4 cut(s) 376, 1093, 1172, 1339
BcgI CGANNNNNNTGC 2 cut(s) 592, 626
BclI TGATCA 2 cut(s) 1336, 1467
BcoDI GTCTC 2 cut(s) 614, 1074
BfaI CTAG 5 cut(s) 18, 524, 1095, 1175, 1238
BfmI CTRYAG 3 cut(s) 773, 1109, 1316
BfuAI ACCTGC 1 cut(s) 1102
BisI GCNGC 8 cut(s) 58, 279, 282, 351, 891, 938, 1169, 1451
BlsI GCNGC 8 cut(s) 59, 280, 283, 352, 892, 939, 1170, 1452
BmeRI GACNNNNNGTC 1 cut(s) 1087
BmsI GCATC 2 cut(s) 4, 775
BpiI GAAGAC 1 cut(s) 687
Bpu10I CCTNAGC 1 cut(s) 372
Bpu14I TTCGAA 1 cut(s) 820
BpuEI CTTGAG 1 cut(s) 1181
Bsa29I ATCGAT 1 cut(s) 1026
BsaI GGTCTC 2 cut(s) 614, 1074
BsaJI CCNNGG 2 cut(s) 1230, 1550
Bsc4I CCNNNNNNNGG 1 cut(s) 1263
Bse3DI GCAATG 1 cut(s) 993
BseCI ATCGAT 1 cut(s) 1026
BseDI CCNNGG 2 cut(s) 1230, 1550
BseGI GGATG 2 cut(s) 557, 1104
BseLI CCNNNNNNNGG 1 cut(s) 1263
BseMI GCAATG 1 cut(s) 993
BseMII CTCAG 4 cut(s) 363, 734, 851, 924
BseSI GKGCMC 1 cut(s) 9
BseXI GCAGC 6 cut(s) 293, 337, 902, 924, 1180, 1437
BsgI GTGCAG 1 cut(s) 828
Bsh1285I CGRYCG 1 cut(s) 30
BshFI GGCC 2 cut(s) 60, 530
BshVI ATCGAT 1 cut(s) 1026
BsiEI CGRYCG 1 cut(s) 30
BsiHKAI GWGCWC 3 cut(s) 9, 249, 1206
BslFI GGGAC 1 cut(s) 1029
BslI CCNNNNNNNGG 1 cut(s) 1263
BsmAI GTCTC 2 cut(s) 614, 1074
BsmFI GGGAC 1 cut(s) 1029
BsmI GAATGC 1 cut(s) 883
BsnI GGCC 2 cut(s) 60, 530
Bso31I GGTCTC 2 cut(s) 614, 1074
Bsp119I TTCGAA 1 cut(s) 820
Bsp1286I GDGCHC 4 cut(s) 9, 249, 1149, 1206
Bsp143I GATC 5 cut(s) 124, 814, 859, 1336, 1467
BspACI CCGC 5 cut(s) 26, 57, 279, 888, 1413
BspANI GGCC 2 cut(s) 60, 530
BspCNI CTCAG 4 cut(s) 364, 733, 850, 925
BspDI ATCGAT 1 cut(s) 1026
BspHI TCATGA 1 cut(s) 1333
BspMAI CTGCAG 2 cut(s) 777, 1113
BspMI ACCTGC 1 cut(s) 1102
BspPI GGATC 1 cut(s) 119
BspQI GCTCTTC 1 cut(s) 1290
BspT104I TTCGAA 1 cut(s) 820
BspTNI GGTCTC 2 cut(s) 614, 1074
BsrDI GCAATG 1 cut(s) 993
BssECI CCNNGG 2 cut(s) 1230, 1550
BssMI GATC 5 cut(s) 124, 814, 859, 1336, 1467
Bst4CI ACNGT 6 cut(s) 148, 158, 608, 1266, 1464, 1543
Bst6I CTCTTC 3 cut(s) 747, 1236, 1290
BstAPI GCANNNNNTGC 1 cut(s) 772
BstBI TTCGAA 1 cut(s) 820
BstC8I GCNNGC 2 cut(s) 1398, 1402
BstDEI CTNAG 6 cut(s) 372, 492, 720, 837, 933, 1582
BstF5I GGATG 2 cut(s) 557, 1104
BstHHI GCGC 1 cut(s) 617
BstKTI GATC 5 cut(s) 127, 817, 862, 1339, 1470
BstMAI GTCTC 2 cut(s) 614, 1074
BstMBI GATC 5 cut(s) 124, 814, 859, 1336, 1467
BstMCI CGRYCG 1 cut(s) 30
BstMWI GCNNNNNNNGC 7 cut(s) 23, 347, 772, 842, 1168, 1318, 1612
BstNSI RCATGY 2 cut(s) 1408, 1516
BstSFI CTRYAG 3 cut(s) 773, 1109, 1316
BstSLI GKGCMC 1 cut(s) 9
BstV1I GCAGC 6 cut(s) 293, 337, 902, 924, 1180, 1437
BstV2I GAAGAC 1 cut(s) 687
Bsu15I ATCGAT 1 cut(s) 1026
BsuRI GGCC 2 cut(s) 60, 530
BsuTUI ATCGAT 1 cut(s) 1026
BtgZI GCGATG 1 cut(s) 401
BtsCI GGATG 2 cut(s) 557, 1104
BtsIMutI CAGTG 1 cut(s) 153
BveI ACCTGC 1 cut(s) 1102
Cac8I GCNNGC 2 cut(s) 1398, 1402
CciI TCATGA 1 cut(s) 1333
CfoI GCGC 1 cut(s) 617
ClaI ATCGAT 1 cut(s) 1026
CviAII CATG 5 cut(s) 448, 1334, 1405, 1513, 1616
DdeI CTNAG 6 cut(s) 372, 492, 720, 837, 933, 1582
DpnI GATC 5 cut(s) 126, 816, 861, 1338, 1469
DpnII GATC 5 cut(s) 124, 814, 859, 1336, 1467
DriI GACNNNNNGTC 1 cut(s) 1087
EaeI YGGCCR 1 cut(s) 528
Eam1104I CTCTTC 3 cut(s) 747, 1236, 1290
Eam1105I GACNNNNNGTC 1 cut(s) 1087
EarI CTCTTC 3 cut(s) 747, 1236, 1290
Ecl136II GAGCTC 2 cut(s) 247, 1204
Eco24I GRGCYC 3 cut(s) 249, 1149, 1206
Eco31I GGTCTC 2 cut(s) 614, 1074
Eco53kI GAGCTC 2 cut(s) 247, 1204
Eco57I CTGAAG 1 cut(s) 1289
EcoICRI GAGCTC 2 cut(s) 247, 1204
EcoRI GAATTC 1 cut(s) 805
EcoT38I GRGCYC 3 cut(s) 249, 1149, 1206
FaeI CATG 5 cut(s) 451, 1337, 1408, 1516, 1619
FalI AAGNNNNNCTT 4 cut(s) 1284, 1316, 1287, 1319
FaqI GGGAC 1 cut(s) 1029
FatI CATG 5 cut(s) 447, 1333, 1404, 1512, 1615
FbaI TGATCA 2 cut(s) 1336, 1467
Fnu4HI GCNGC 8 cut(s) 58, 279, 282, 351, 891, 938, 1169, 1451
FokI GGATG 2 cut(s) 544, 1111
FriOI GRGCYC 3 cut(s) 249, 1149, 1206
Fsp4HI GCNGC 8 cut(s) 58, 279, 282, 351, 891, 938, 1169, 1451
FspBI CTAG 5 cut(s) 18, 524, 1095, 1175, 1238
GlaI GCGC 1 cut(s) 616
GluI GCNGC 8 cut(s) 58, 279, 282, 351, 891, 938, 1169, 1451
HaeIII GGCC 2 cut(s) 60, 530
HhaI GCGC 1 cut(s) 617
Hin1II CATG 5 cut(s) 451, 1337, 1408, 1516, 1619
Hin6I GCGC 1 cut(s) 615
HinP1I GCGC 1 cut(s) 615
HincII GTYRAC 2 cut(s) 193, 1269
HindII GTYRAC 2 cut(s) 193, 1269
HindIII AAGCTT 2 cut(s) 117, 1473
HinfI GANTC 9 cut(s) 391, 797, 923, 998, 1105, 1379, 1388, 1457, 1576
HpaI GTTAAC 2 cut(s) 193, 1269
HphI GGTGA 2 cut(s) 1331, 1402
Hpy166II GTNNAC 7 cut(s) 7, 193, 323, 583, 1269, 1410, 1518
Hpy188I TCNGA 5 cut(s) 840, 934, 1079, 1231, 1308
Hpy188III TCNNGA 3 cut(s) 538, 1175, 1334
Hpy8I GTNNAC 7 cut(s) 7, 193, 323, 583, 1269, 1410, 1518
HpyAV CCTTC 5 cut(s) 725, 751, 938, 967, 971
HpyCH4III ACNGT 6 cut(s) 148, 158, 608, 1266, 1464, 1543
HpyCH4IV ACGT 2 cut(s) 83, 471
HpyF10VI GCNNNNNNNGC 7 cut(s) 23, 347, 772, 842, 1168, 1318, 1612
HpyF3I CTNAG 6 cut(s) 372, 492, 720, 837, 933, 1582
HpySE526I ACGT 2 cut(s) 83, 471
Hsp92II CATG 5 cut(s) 451, 1337, 1408, 1516, 1619
HspAI GCGC 1 cut(s) 615
Ksp22I TGATCA 2 cut(s) 1336, 1467
KspAI GTTAAC 2 cut(s) 193, 1269
Kzo9I GATC 5 cut(s) 124, 814, 859, 1336, 1467
LguI GCTCTTC 1 cut(s) 1290
LmnI GCTCC 1 cut(s) 1201
Lsp1109I GCAGC 6 cut(s) 293, 337, 902, 924, 1180, 1437
LweI GCATC 2 cut(s) 4, 775
MaeI CTAG 5 cut(s) 18, 524, 1095, 1175, 1238
MaeII ACGT 2 cut(s) 83, 471
MaeIII GTNAC 3 cut(s) 170, 214, 1280
MalI GATC 5 cut(s) 126, 816, 861, 1338, 1469
MboI GATC 5 cut(s) 124, 814, 859, 1336, 1467
MboII GAAGA 9 cut(s) 259, 692, 764, 809, 869, 973, 1253, 1295, 1307
MfeI CAATTG 1 cut(s) 635
MhlI GDGCHC 4 cut(s) 9, 249, 1149, 1206
MlsI TGGCCA 1 cut(s) 530
MluCI AATT 8 cut(s) 75, 228, 618, 635, 747, 805, 967, 1220
MluNI TGGCCA 1 cut(s) 530
MlyI GAGTC 2 cut(s) 806, 1570
MmeI TCCRAC 3 cut(s) 720, 1057, 1347
MnlI CCTC 8 cut(s) 77, 291, 396, 455, 695, 1225, 1363, 1560
Mox20I TGGCCA 1 cut(s) 530
MroXI GAANNNNTTC 1 cut(s) 1299
MscI TGGCCA 1 cut(s) 530
MseI TTAA 6 cut(s) 152, 192, 222, 486, 1214, 1268
MslI CAYNNNNRTG 2 cut(s) 12, 867
Msp20I TGGCCA 1 cut(s) 530
MunI CAATTG 1 cut(s) 635
Mva1269I GAATGC 1 cut(s) 883
MwoI GCNNNNNNNGC 7 cut(s) 23, 347, 772, 842, 1168, 1318, 1612
NdeII GATC 5 cut(s) 124, 814, 859, 1336, 1467
NlaIII CATG 5 cut(s) 451, 1337, 1408, 1516, 1619
NmeAIII GCCGAG 2 cut(s) 591, 1531
NmuCI GTSAC 2 cut(s) 214, 1280
NspI RCATGY 2 cut(s) 1408, 1516
NspV TTCGAA 1 cut(s) 820
PagI TCATGA 1 cut(s) 1333
PciI ACATGT 1 cut(s) 1512
PciSI GCTCTTC 1 cut(s) 1290
PctI GAATGC 1 cut(s) 883
PdmI GAANNNNTTC 1 cut(s) 1299
PfeI GAWTC 7 cut(s) 391, 923, 998, 1105, 1379, 1388, 1457
PkrI GCNGC 8 cut(s) 59, 280, 283, 352, 892, 939, 1170, 1452
PleI GAGTC 2 cut(s) 805, 1570
PpsI GAGTC 2 cut(s) 805, 1570
PscI ACATGT 1 cut(s) 1512
PshBI ATTAAT 1 cut(s) 222
Psp124BI GAGCTC 2 cut(s) 249, 1206
PstI CTGCAG 2 cut(s) 777, 1113
RseI CAYNNNNRTG 2 cut(s) 12, 867
SacI GAGCTC 2 cut(s) 249, 1206
SapI GCTCTTC 1 cut(s) 1290
SaqAI TTAA 6 cut(s) 152, 192, 222, 486, 1214, 1268
SatI GCNGC 8 cut(s) 58, 279, 282, 351, 891, 938, 1169, 1451
Sau3AI GATC 5 cut(s) 124, 814, 859, 1336, 1467
SchI GAGTC 2 cut(s) 806, 1570
SduI GDGCHC 4 cut(s) 9, 249, 1149, 1206
SfaNI GCATC 2 cut(s) 4, 775
SfcI CTRYAG 3 cut(s) 773, 1109, 1316
SfuI TTCGAA 1 cut(s) 820
SmiMI CAYNNNNRTG 2 cut(s) 12, 867
SmlI CTYRAG 1 cut(s) 1196
SmoI CTYRAG 1 cut(s) 1196
Sse9I AATT 8 cut(s) 75, 228, 618, 635, 747, 805, 967, 1220
SsiI CCGC 5 cut(s) 26, 57, 279, 888, 1413
SspI AATATT 1 cut(s) 792
SspMI CTAG 5 cut(s) 18, 524, 1095, 1175, 1238
SstI GAGCTC 2 cut(s) 249, 1206
TaaI ACNGT 6 cut(s) 148, 158, 608, 1266, 1464, 1543
TaiI ACGT 2 cut(s) 86, 474
TaqI TCGA 6 cut(s) 123, 394, 809, 820, 1026, 1206
TasI AATT 8 cut(s) 75, 228, 618, 635, 747, 805, 967, 1220
TauI GCSGC 2 cut(s) 60, 281
TfiI GAWTC 7 cut(s) 391, 923, 998, 1105, 1379, 1388, 1457
Tru1I TTAA 6 cut(s) 152, 192, 222, 486, 1214, 1268
Tru9I TTAA 6 cut(s) 152, 192, 222, 486, 1214, 1268
TscAI CASTG 1 cut(s) 153
TseFI GTSAC 2 cut(s) 214, 1280
TseI GCWGC 6 cut(s) 281, 350, 890, 937, 1168, 1450
Tsp45I GTSAC 2 cut(s) 214, 1280
TspDTI ATGAA 9 cut(s) 76, 404, 580, 693, 720, 974, 990, 1056, 1322
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 1 cut(s) 153
VneI GTGCAC 1 cut(s) 5
VspI ATTAAT 1 cut(s) 222
XapI RAATTY 3 cut(s) 805, 967, 1220
XbaI TCTAGA 1 cut(s) 1174
XceI RCATGY 2 cut(s) 1408, 1516
XmnI GAANNNNTTC 1 cut(s) 1299
XspI CTAG 5 cut(s) 18, 524, 1095, 1175, 1238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.