Protein GAMETE EXPRESSED
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490 |
| fragaria_vesca | FvH4_6g33230 FvH4_6g41730 |
| malus_domestica | MD09G1119800.v1.1 MD09G1266100.v1.1 MD17G1110600.v1.1 |
| prunus_persica | Prupe.3G163900_v2.0.a1 Prupe.3G204300_v2.0.a1 Prupe.3G204300_v2.0.a1 |
| pyrus_communis | pycom07g05510 |
| rosa_chinensis | RchiOBHm_Chr2g0139401 RchiOBHm_Chr2g0142951 RchiOBHm_Chr2g0157531 |
| rosa_laevigata | RLG00000020000 RLG00000020995 |
| rosa_multiflora | Rmu_co8048568.1_g000001 Rmu_sc0000083.1_g000018 Rmu_sc0002277.1_g000037 Rmu_sc0036081.1_g000001 Rmu_sc0036082.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092150 Rroxscaffold_2G00102200 Rroxscaffold_2G00147380 |
| rosa_rugosa | Rorug02G0377400 Rorug02G0461800 |
| rosa_samantha | Rh1CG268300 Rh2AG430400 Rh2AG525900 Rh2BG439400 Rh2BG540600 Rh2CG416100 Rh2CG510600 Rh2DG449400 Rh2DG549100 Rh4BG060600 Rh4CG066400 Rh5DG444200 Rh7DG175700 |
| rosa_wichuraiana | Rw2G035150 Rw2G043560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1102 |
| AciI | CCGC | 5 cut(s) | 26, 57, 279, 888, 1413 |
| AclWI | GGATC | 1 cut(s) | 119 |
| AcoI | YGGCCR | 1 cut(s) | 528 |
| AcsI | RAATTY | 3 cut(s) | 805, 967, 1220 |
| AcuI | CTGAAG | 1 cut(s) | 1289 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1263 |
| AflIII | ACRYGT | 1 cut(s) | 1512 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1087 |
| Alw21I | GWGCWC | 3 cut(s) | 9, 249, 1206 |
| Alw26I | GTCTC | 2 cut(s) | 614, 1074 |
| Alw44I | GTGCAC | 1 cut(s) | 5 |
| AlwI | GGATC | 1 cut(s) | 119 |
| AoxI | GGCC | 2 cut(s) | 58, 528 |
| ApaLI | GTGCAC | 1 cut(s) | 5 |
| ApeKI | GCWGC | 6 cut(s) | 281, 350, 890, 937, 1168, 1450 |
| ApoI | RAATTY | 3 cut(s) | 805, 967, 1220 |
| AseI | ATTAAT | 1 cut(s) | 222 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1299 |
| AspLEI | GCGC | 1 cut(s) | 617 |
| AsuHPI | GGTGA | 2 cut(s) | 1331, 1402 |
| AsuII | TTCGAA | 1 cut(s) | 820 |
| BaeGI | GKGCMC | 1 cut(s) | 9 |
| BalI | TGGCCA | 1 cut(s) | 530 |
| BanII | GRGCYC | 3 cut(s) | 249, 1149, 1206 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1581, 1584, 1613, 1616 |
| BbsI | GAAGAC | 1 cut(s) | 687 |
| Bbv12I | GWGCWC | 3 cut(s) | 9, 249, 1206 |
| BbvI | GCAGC | 6 cut(s) | 293, 337, 902, 924, 1180, 1437 |
| BccI | CCATC | 4 cut(s) | 376, 1093, 1172, 1339 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 592, 626 |
| BclI | TGATCA | 2 cut(s) | 1336, 1467 |
| BcoDI | GTCTC | 2 cut(s) | 614, 1074 |
| BfaI | CTAG | 5 cut(s) | 18, 524, 1095, 1175, 1238 |
| BfmI | CTRYAG | 3 cut(s) | 773, 1109, 1316 |
| BfuAI | ACCTGC | 1 cut(s) | 1102 |
| BisI | GCNGC | 8 cut(s) | 58, 279, 282, 351, 891, 938, 1169, 1451 |
| BlsI | GCNGC | 8 cut(s) | 59, 280, 283, 352, 892, 939, 1170, 1452 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1087 |
| BmsI | GCATC | 2 cut(s) | 4, 775 |
| BpiI | GAAGAC | 1 cut(s) | 687 |
| Bpu10I | CCTNAGC | 1 cut(s) | 372 |
| Bpu14I | TTCGAA | 1 cut(s) | 820 |
| BpuEI | CTTGAG | 1 cut(s) | 1181 |
| Bsa29I | ATCGAT | 1 cut(s) | 1026 |
| BsaI | GGTCTC | 2 cut(s) | 614, 1074 |
| BsaJI | CCNNGG | 2 cut(s) | 1230, 1550 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1263 |
| Bse3DI | GCAATG | 1 cut(s) | 993 |
| BseCI | ATCGAT | 1 cut(s) | 1026 |
| BseDI | CCNNGG | 2 cut(s) | 1230, 1550 |
| BseGI | GGATG | 2 cut(s) | 557, 1104 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1263 |
| BseMI | GCAATG | 1 cut(s) | 993 |
| BseMII | CTCAG | 4 cut(s) | 363, 734, 851, 924 |
| BseSI | GKGCMC | 1 cut(s) | 9 |
| BseXI | GCAGC | 6 cut(s) | 293, 337, 902, 924, 1180, 1437 |
| BsgI | GTGCAG | 1 cut(s) | 828 |
| Bsh1285I | CGRYCG | 1 cut(s) | 30 |
| BshFI | GGCC | 2 cut(s) | 60, 530 |
| BshVI | ATCGAT | 1 cut(s) | 1026 |
| BsiEI | CGRYCG | 1 cut(s) | 30 |
| BsiHKAI | GWGCWC | 3 cut(s) | 9, 249, 1206 |
| BslFI | GGGAC | 1 cut(s) | 1029 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1263 |
| BsmAI | GTCTC | 2 cut(s) | 614, 1074 |
| BsmFI | GGGAC | 1 cut(s) | 1029 |
| BsmI | GAATGC | 1 cut(s) | 883 |
| BsnI | GGCC | 2 cut(s) | 60, 530 |
| Bso31I | GGTCTC | 2 cut(s) | 614, 1074 |
| Bsp119I | TTCGAA | 1 cut(s) | 820 |
| Bsp1286I | GDGCHC | 4 cut(s) | 9, 249, 1149, 1206 |
| Bsp143I | GATC | 5 cut(s) | 124, 814, 859, 1336, 1467 |
| BspACI | CCGC | 5 cut(s) | 26, 57, 279, 888, 1413 |
| BspANI | GGCC | 2 cut(s) | 60, 530 |
| BspCNI | CTCAG | 4 cut(s) | 364, 733, 850, 925 |
| BspDI | ATCGAT | 1 cut(s) | 1026 |
| BspHI | TCATGA | 1 cut(s) | 1333 |
| BspMAI | CTGCAG | 2 cut(s) | 777, 1113 |
| BspMI | ACCTGC | 1 cut(s) | 1102 |
| BspPI | GGATC | 1 cut(s) | 119 |
| BspQI | GCTCTTC | 1 cut(s) | 1290 |
| BspT104I | TTCGAA | 1 cut(s) | 820 |
| BspTNI | GGTCTC | 2 cut(s) | 614, 1074 |
| BsrDI | GCAATG | 1 cut(s) | 993 |
| BssECI | CCNNGG | 2 cut(s) | 1230, 1550 |
| BssMI | GATC | 5 cut(s) | 124, 814, 859, 1336, 1467 |
| Bst4CI | ACNGT | 6 cut(s) | 148, 158, 608, 1266, 1464, 1543 |
| Bst6I | CTCTTC | 3 cut(s) | 747, 1236, 1290 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 772 |
| BstBI | TTCGAA | 1 cut(s) | 820 |
| BstC8I | GCNNGC | 2 cut(s) | 1398, 1402 |
| BstDEI | CTNAG | 6 cut(s) | 372, 492, 720, 837, 933, 1582 |
| BstF5I | GGATG | 2 cut(s) | 557, 1104 |
| BstHHI | GCGC | 1 cut(s) | 617 |
| BstKTI | GATC | 5 cut(s) | 127, 817, 862, 1339, 1470 |
| BstMAI | GTCTC | 2 cut(s) | 614, 1074 |
| BstMBI | GATC | 5 cut(s) | 124, 814, 859, 1336, 1467 |
| BstMCI | CGRYCG | 1 cut(s) | 30 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 23, 347, 772, 842, 1168, 1318, 1612 |
| BstNSI | RCATGY | 2 cut(s) | 1408, 1516 |
| BstSFI | CTRYAG | 3 cut(s) | 773, 1109, 1316 |
| BstSLI | GKGCMC | 1 cut(s) | 9 |
| BstV1I | GCAGC | 6 cut(s) | 293, 337, 902, 924, 1180, 1437 |
| BstV2I | GAAGAC | 1 cut(s) | 687 |
| Bsu15I | ATCGAT | 1 cut(s) | 1026 |
| BsuRI | GGCC | 2 cut(s) | 60, 530 |
| BsuTUI | ATCGAT | 1 cut(s) | 1026 |
| BtgZI | GCGATG | 1 cut(s) | 401 |
| BtsCI | GGATG | 2 cut(s) | 557, 1104 |
| BtsIMutI | CAGTG | 1 cut(s) | 153 |
| BveI | ACCTGC | 1 cut(s) | 1102 |
| Cac8I | GCNNGC | 2 cut(s) | 1398, 1402 |
| CciI | TCATGA | 1 cut(s) | 1333 |
| CfoI | GCGC | 1 cut(s) | 617 |
| ClaI | ATCGAT | 1 cut(s) | 1026 |
| CviAII | CATG | 5 cut(s) | 448, 1334, 1405, 1513, 1616 |
| DdeI | CTNAG | 6 cut(s) | 372, 492, 720, 837, 933, 1582 |
| DpnI | GATC | 5 cut(s) | 126, 816, 861, 1338, 1469 |
| DpnII | GATC | 5 cut(s) | 124, 814, 859, 1336, 1467 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1087 |
| EaeI | YGGCCR | 1 cut(s) | 528 |
| Eam1104I | CTCTTC | 3 cut(s) | 747, 1236, 1290 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1087 |
| EarI | CTCTTC | 3 cut(s) | 747, 1236, 1290 |
| Ecl136II | GAGCTC | 2 cut(s) | 247, 1204 |
| Eco24I | GRGCYC | 3 cut(s) | 249, 1149, 1206 |
| Eco31I | GGTCTC | 2 cut(s) | 614, 1074 |
| Eco53kI | GAGCTC | 2 cut(s) | 247, 1204 |
| Eco57I | CTGAAG | 1 cut(s) | 1289 |
| EcoICRI | GAGCTC | 2 cut(s) | 247, 1204 |
| EcoRI | GAATTC | 1 cut(s) | 805 |
| EcoT38I | GRGCYC | 3 cut(s) | 249, 1149, 1206 |
| FaeI | CATG | 5 cut(s) | 451, 1337, 1408, 1516, 1619 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1284, 1316, 1287, 1319 |
| FaqI | GGGAC | 1 cut(s) | 1029 |
| FatI | CATG | 5 cut(s) | 447, 1333, 1404, 1512, 1615 |
| FbaI | TGATCA | 2 cut(s) | 1336, 1467 |
| Fnu4HI | GCNGC | 8 cut(s) | 58, 279, 282, 351, 891, 938, 1169, 1451 |
| FokI | GGATG | 2 cut(s) | 544, 1111 |
| FriOI | GRGCYC | 3 cut(s) | 249, 1149, 1206 |
| Fsp4HI | GCNGC | 8 cut(s) | 58, 279, 282, 351, 891, 938, 1169, 1451 |
| FspBI | CTAG | 5 cut(s) | 18, 524, 1095, 1175, 1238 |
| GlaI | GCGC | 1 cut(s) | 616 |
| GluI | GCNGC | 8 cut(s) | 58, 279, 282, 351, 891, 938, 1169, 1451 |
| HaeIII | GGCC | 2 cut(s) | 60, 530 |
| HhaI | GCGC | 1 cut(s) | 617 |
| Hin1II | CATG | 5 cut(s) | 451, 1337, 1408, 1516, 1619 |
| Hin6I | GCGC | 1 cut(s) | 615 |
| HinP1I | GCGC | 1 cut(s) | 615 |
| HincII | GTYRAC | 2 cut(s) | 193, 1269 |
| HindII | GTYRAC | 2 cut(s) | 193, 1269 |
| HindIII | AAGCTT | 2 cut(s) | 117, 1473 |
| HinfI | GANTC | 9 cut(s) | 391, 797, 923, 998, 1105, 1379, 1388, 1457, 1576 |
| HpaI | GTTAAC | 2 cut(s) | 193, 1269 |
| HphI | GGTGA | 2 cut(s) | 1331, 1402 |
| Hpy166II | GTNNAC | 7 cut(s) | 7, 193, 323, 583, 1269, 1410, 1518 |
| Hpy188I | TCNGA | 5 cut(s) | 840, 934, 1079, 1231, 1308 |
| Hpy188III | TCNNGA | 3 cut(s) | 538, 1175, 1334 |
| Hpy8I | GTNNAC | 7 cut(s) | 7, 193, 323, 583, 1269, 1410, 1518 |
| HpyAV | CCTTC | 5 cut(s) | 725, 751, 938, 967, 971 |
| HpyCH4III | ACNGT | 6 cut(s) | 148, 158, 608, 1266, 1464, 1543 |
| HpyCH4IV | ACGT | 2 cut(s) | 83, 471 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 23, 347, 772, 842, 1168, 1318, 1612 |
| HpyF3I | CTNAG | 6 cut(s) | 372, 492, 720, 837, 933, 1582 |
| HpySE526I | ACGT | 2 cut(s) | 83, 471 |
| Hsp92II | CATG | 5 cut(s) | 451, 1337, 1408, 1516, 1619 |
| HspAI | GCGC | 1 cut(s) | 615 |
| Ksp22I | TGATCA | 2 cut(s) | 1336, 1467 |
| KspAI | GTTAAC | 2 cut(s) | 193, 1269 |
| Kzo9I | GATC | 5 cut(s) | 124, 814, 859, 1336, 1467 |
| LguI | GCTCTTC | 1 cut(s) | 1290 |
| LmnI | GCTCC | 1 cut(s) | 1201 |
| Lsp1109I | GCAGC | 6 cut(s) | 293, 337, 902, 924, 1180, 1437 |
| LweI | GCATC | 2 cut(s) | 4, 775 |
| MaeI | CTAG | 5 cut(s) | 18, 524, 1095, 1175, 1238 |
| MaeII | ACGT | 2 cut(s) | 83, 471 |
| MaeIII | GTNAC | 3 cut(s) | 170, 214, 1280 |
| MalI | GATC | 5 cut(s) | 126, 816, 861, 1338, 1469 |
| MboI | GATC | 5 cut(s) | 124, 814, 859, 1336, 1467 |
| MboII | GAAGA | 9 cut(s) | 259, 692, 764, 809, 869, 973, 1253, 1295, 1307 |
| MfeI | CAATTG | 1 cut(s) | 635 |
| MhlI | GDGCHC | 4 cut(s) | 9, 249, 1149, 1206 |
| MlsI | TGGCCA | 1 cut(s) | 530 |
| MluCI | AATT | 8 cut(s) | 75, 228, 618, 635, 747, 805, 967, 1220 |
| MluNI | TGGCCA | 1 cut(s) | 530 |
| MlyI | GAGTC | 2 cut(s) | 806, 1570 |
| MmeI | TCCRAC | 3 cut(s) | 720, 1057, 1347 |
| MnlI | CCTC | 8 cut(s) | 77, 291, 396, 455, 695, 1225, 1363, 1560 |
| Mox20I | TGGCCA | 1 cut(s) | 530 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1299 |
| MscI | TGGCCA | 1 cut(s) | 530 |
| MseI | TTAA | 6 cut(s) | 152, 192, 222, 486, 1214, 1268 |
| MslI | CAYNNNNRTG | 2 cut(s) | 12, 867 |
| Msp20I | TGGCCA | 1 cut(s) | 530 |
| MunI | CAATTG | 1 cut(s) | 635 |
| Mva1269I | GAATGC | 1 cut(s) | 883 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 23, 347, 772, 842, 1168, 1318, 1612 |
| NdeII | GATC | 5 cut(s) | 124, 814, 859, 1336, 1467 |
| NlaIII | CATG | 5 cut(s) | 451, 1337, 1408, 1516, 1619 |
| NmeAIII | GCCGAG | 2 cut(s) | 591, 1531 |
| NmuCI | GTSAC | 2 cut(s) | 214, 1280 |
| NspI | RCATGY | 2 cut(s) | 1408, 1516 |
| NspV | TTCGAA | 1 cut(s) | 820 |
| PagI | TCATGA | 1 cut(s) | 1333 |
| PciI | ACATGT | 1 cut(s) | 1512 |
| PciSI | GCTCTTC | 1 cut(s) | 1290 |
| PctI | GAATGC | 1 cut(s) | 883 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1299 |
| PfeI | GAWTC | 7 cut(s) | 391, 923, 998, 1105, 1379, 1388, 1457 |
| PkrI | GCNGC | 8 cut(s) | 59, 280, 283, 352, 892, 939, 1170, 1452 |
| PleI | GAGTC | 2 cut(s) | 805, 1570 |
| PpsI | GAGTC | 2 cut(s) | 805, 1570 |
| PscI | ACATGT | 1 cut(s) | 1512 |
| PshBI | ATTAAT | 1 cut(s) | 222 |
| Psp124BI | GAGCTC | 2 cut(s) | 249, 1206 |
| PstI | CTGCAG | 2 cut(s) | 777, 1113 |
| RseI | CAYNNNNRTG | 2 cut(s) | 12, 867 |
| SacI | GAGCTC | 2 cut(s) | 249, 1206 |
| SapI | GCTCTTC | 1 cut(s) | 1290 |
| SaqAI | TTAA | 6 cut(s) | 152, 192, 222, 486, 1214, 1268 |
| SatI | GCNGC | 8 cut(s) | 58, 279, 282, 351, 891, 938, 1169, 1451 |
| Sau3AI | GATC | 5 cut(s) | 124, 814, 859, 1336, 1467 |
| SchI | GAGTC | 2 cut(s) | 806, 1570 |
| SduI | GDGCHC | 4 cut(s) | 9, 249, 1149, 1206 |
| SfaNI | GCATC | 2 cut(s) | 4, 775 |
| SfcI | CTRYAG | 3 cut(s) | 773, 1109, 1316 |
| SfuI | TTCGAA | 1 cut(s) | 820 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 12, 867 |
| SmlI | CTYRAG | 1 cut(s) | 1196 |
| SmoI | CTYRAG | 1 cut(s) | 1196 |
| Sse9I | AATT | 8 cut(s) | 75, 228, 618, 635, 747, 805, 967, 1220 |
| SsiI | CCGC | 5 cut(s) | 26, 57, 279, 888, 1413 |
| SspI | AATATT | 1 cut(s) | 792 |
| SspMI | CTAG | 5 cut(s) | 18, 524, 1095, 1175, 1238 |
| SstI | GAGCTC | 2 cut(s) | 249, 1206 |
| TaaI | ACNGT | 6 cut(s) | 148, 158, 608, 1266, 1464, 1543 |
| TaiI | ACGT | 2 cut(s) | 86, 474 |
| TaqI | TCGA | 6 cut(s) | 123, 394, 809, 820, 1026, 1206 |
| TasI | AATT | 8 cut(s) | 75, 228, 618, 635, 747, 805, 967, 1220 |
| TauI | GCSGC | 2 cut(s) | 60, 281 |
| TfiI | GAWTC | 7 cut(s) | 391, 923, 998, 1105, 1379, 1388, 1457 |
| Tru1I | TTAA | 6 cut(s) | 152, 192, 222, 486, 1214, 1268 |
| Tru9I | TTAA | 6 cut(s) | 152, 192, 222, 486, 1214, 1268 |
| TscAI | CASTG | 1 cut(s) | 153 |
| TseFI | GTSAC | 2 cut(s) | 214, 1280 |
| TseI | GCWGC | 6 cut(s) | 281, 350, 890, 937, 1168, 1450 |
| Tsp45I | GTSAC | 2 cut(s) | 214, 1280 |
| TspDTI | ATGAA | 9 cut(s) | 76, 404, 580, 693, 720, 974, 990, 1056, 1322 |
| TspGWI | ACGGA | 1 cut(s) | 192 |
| TspRI | CASTG | 1 cut(s) | 153 |
| VneI | GTGCAC | 1 cut(s) | 5 |
| VspI | ATTAAT | 1 cut(s) | 222 |
| XapI | RAATTY | 3 cut(s) | 805, 967, 1220 |
| XbaI | TCTAGA | 1 cut(s) | 1174 |
| XceI | RCATGY | 2 cut(s) | 1408, 1516 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1299 |
| XspI | CTAG | 5 cut(s) | 18, 524, 1095, 1175, 1238 |