MD17G1110600.v1.1

magnesium ion transmembrane transporter activity

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
9516383 .. 9518537
2155 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1110600.v1.1.491

Sequence Viewer

Length: 1788 bp
ATGGGACAATGTAAGTCTCTTCTTTTACTCTTGATCTTCCTAACTCTCTCAAGGTCTGGTATGTCATGGTTTTGGTCCTCTTCTTCCGGCAACACTGGCAATAATCCACCTCAAAATCTGCAAATATCAAGTGATATCGTTGCCGAGTTCTCCATGGATTCTCTCAATGATGAAAAAGGCACTGAACGTGTCAACAATGCTAGAAGAAAACTGGTGGGCGCTAATTCTTGTTGGCATGATGCTTATAGAGGAATATTTGGAGCATGCTCAGAGATGGCCGCGGATAACAATGATAAGAGGAAGAGATTTGCTTGGGATCTTAGCCATTGCTTTCAAAAGGATTCTGGAAGAACCCCTTTTCCAATGTGTCGCGTAGGCTCTCCTATGAAATCTTGCCTTGAAAAACTGGACAATGATGCTATTCACACGTACCGCGGATTCTATTTAGAAACCAACTCCATTTGCCATCAGTTACAGTCTGGAATTTTCAGGCATCAGACGGAGAAATTGGTGAATGATTTGAAAAAATCATCTGATTATGCAGAGAAAAAATTAGTGAACATAGCCGAAACGGCAGATATGTTGTTAGAGGGCTCGAAAGATATACATGATTCTTTGACTTCAATCGATGAACAAACACAACAAGTGGCTCAGACTTCCAAGAATGTGAGTGATCACATTGGTGAGATAGTGAAGCAGTCAGAGGCGGTGTTTGAGCAGTCCAAGAAAATTGAAGCCTCCCAATTGGAATTGCAGATGGGGCAGCACAAACTGAAGGAAAACTTGGAAGCAGGGATGGTAATGGTTCATGAATCTTATCACATTTTAGGTAAAGGAATACTCAGCTTGCAGGATGAGACTAACGAAATAGAGAAGAAGATAGGTGTTGTTGGAGAAGCCATGTCTTCAAAGATGAGCAAGTTGCAAAGCAAGGCGGACGATATTGGGAATGTAGCTGATATTTCCTTGGAAAGGCAAAAGGAACTTCTACATGGCCAATCTGAAGCGCTTAACGGGCTTCAGTCACTGACTAAATTCCAATCCCAAGCTCTAAAAGAGAGCAAGGGAATATTGCAGCAGTTTGCTACATTAGGCCGTGAAAAACAGGAAGAGCTTCTTCGAAGCCAAGAGAAGATTCAACGAGCTCATGACCATCTAGTCGAAAATTCAAAGACCATATTGGAAGCTCAGGAAACTTTTGAACAGAAGCAGGCATCCATGTTTGTTGCTTTGGATAGGCTATTTGCCTTGCACGACGCACTGCTGGTGGAATCGCGGTCAATGAAAGCAGTATTTTTCTATTTCATATCAATGCTTGCCATTTATATGTTAACCAGCACAAAGCAAACTTACCCAGTGAGACACTGGCTTTATTTGTTTCTATGCCTTGCATTCCTGCTTGAATTTGCAGTCCTTCGATTTGCATCAAATGGAATAGAGCAACGGACTCGGTGGGATAGTGGAGTTAGGAACGTTTATGTGCTGTATGCTGCCCTTCACTTATTATATGCTTGTTGGAAATACAAGGACTATGAAAGGCTAAACTACGATATGCTACAAAAACTAACAGAGGAGGTTATAAGCTTGCGAAAAAATGCAGATCAGTTTTCCTGGGAATCGGATGATGAATCTGACTGGTCTGCATTCGTTGACAAAGACATATCAGACGGCATTGAACACCTGACGGATTCAAACCATTTCAAAGAAGAAGTTGGAGATAATTTACATGCAGTCTCTTCATATACTAGAAGATACAATCTACGCAGTCGCAGTCGCAATCGTATCTGA

Protein Analysis

596

Amino Acids

68.03

Weight (kDa)

6.06

Isoelectric Point (pI)

57.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1580
AasI GACNNNNNNGTC 1 cut(s) 1157
AccII CGCG 4 cut(s) 281, 372, 435, 1276
AciI CCGC 7 cut(s) 279, 281, 433, 435, 707, 935, 1276
AclI AACGTT 1 cut(s) 1473
AclWI GGATC 1 cut(s) 324
AcoI YGGCCR 2 cut(s) 276, 994
AcsI RAATTY 4 cut(s) 483, 1034, 1165, 1403
AcuI CTGAAG 3 cut(s) 794, 1004, 1023
AfaI GTAC 1 cut(s) 431
AfeI AGCGCT 1 cut(s) 1008
AfiI CCNNNNNNNGG 1 cut(s) 972
AflIII ACRYGT 2 cut(s) 187, 426
AjnI CCWGG 1 cut(s) 1610
AjuI GAANNNNNNNTTGG 4 cut(s) 767, 799, 1119, 1151
AleI CACNNNNGTG 1 cut(s) 681
AloI GAACNNNNNNTCC 2 cut(s) 343, 375
AluBI AGCT 7 cut(s) 846, 956, 1049, 1114, 1145, 1187, 1584
AluI AGCT 7 cut(s) 846, 956, 1049, 1114, 1145, 1187, 1584
Alw21I GWGCWC 1 cut(s) 1147
Alw26I GTCTC 4 cut(s) 21, 851, 1354, 1738
AlwI GGATC 1 cut(s) 324
AlwNI CAGNNNCTG 1 cut(s) 1027
Aor51HI AGCGCT 1 cut(s) 1008
AoxI GGCC 3 cut(s) 276, 994, 1093
ApeKI GCWGC 3 cut(s) 763, 1075, 1490
ApoI RAATTY 4 cut(s) 483, 1034, 1165, 1403
Asp700I GAANNNNTTC 1 cut(s) 1113
AspLEI GCGC 2 cut(s) 221, 1009
AspS9I GGNCC 1 cut(s) 75
AsuHPI GGTGA 2 cut(s) 523, 695
AsuII TTCGAA 1 cut(s) 1120
AvaII GGWCC 1 cut(s) 75
BalI TGGCCA 1 cut(s) 996
BanII GRGCYC 2 cut(s) 596, 1147
BbsI GAAGAC 1 cut(s) 897
Bbv12I GWGCWC 1 cut(s) 1147
BbvI GCAGC 3 cut(s) 775, 1087, 1477
BccI CCATC 5 cut(s) 268, 474, 751, 790, 1161
BceAI ACGGC 3 cut(s) 588, 1080, 1684
BcgI CGANNNNNNTGC 2 cut(s) 1430, 1464
BciT130I CCWGG 1 cut(s) 1612
BclI TGATCA 1 cut(s) 673
BcoDI GTCTC 4 cut(s) 21, 851, 1354, 1738
BfaI CTAG 3 cut(s) 201, 1157, 1746
BfoI RGCGCY 2 cut(s) 222, 1010
BglI GCCNNNNNGGC 1 cut(s) 572
BisI GCNGC 4 cut(s) 279, 764, 1076, 1491
BlsI GCNGC 4 cut(s) 280, 765, 1077, 1492
Bme1390I CCNGG 1 cut(s) 1612
Bme18I GGWCC 1 cut(s) 75
BmgT120I GGNCC 1 cut(s) 75
BmrFI CCNGG 1 cut(s) 1612
BmrI ACTGGG 1 cut(s) 1349
BmsI GCATC 5 cut(s) 229, 406, 502, 1223, 1433
BmuI ACTGGG 1 cut(s) 1349
BpiI GAAGAC 1 cut(s) 897
Bpu10I CCTNAGC 1 cut(s) 1188
Bpu14I TTCGAA 1 cut(s) 1120
BpuEI CTTGAG 1 cut(s) 34
Bsa29I ATCGAT 1 cut(s) 627
BsaAI YACGTR 1 cut(s) 429
BsaBI GATNNNNATC 1 cut(s) 1423
BsaJI CCNNGG 5 cut(s) 153, 279, 433, 966, 1611
Bsc4I CCNNNNNNNGG 1 cut(s) 972
Bse1I ACTGG 6 cut(s) 100, 216, 411, 1355, 1370, 1640
Bse3DI GCAATG 1 cut(s) 325
Bse8I GATNNNNATC 1 cut(s) 1423
BseBI CCWGG 1 cut(s) 1612
BseCI ATCGAT 1 cut(s) 627
BseDI CCNNGG 5 cut(s) 153, 279, 433, 966, 1611
BseGI GGATG 4 cut(s) 801, 859, 1214, 1627
BseJI GATNNNNATC 1 cut(s) 1423
BseLI CCNNNNNNNGG 1 cut(s) 972
BseMI GCAATG 1 cut(s) 325
BseMII CTCAG 4 cut(s) 282, 665, 856, 1202
BseNI ACTGG 6 cut(s) 100, 216, 411, 1355, 1370, 1640
BseRI GAGGAG 1 cut(s) 1586
BseXI GCAGC 3 cut(s) 775, 1087, 1477
Bsh1236I CGCG 4 cut(s) 281, 372, 435, 1276
BshFI GGCC 3 cut(s) 278, 996, 1095
BshVI ATCGAT 1 cut(s) 627
BsiHKAI GWGCWC 1 cut(s) 1147
BsiSI CCGG 1 cut(s) 87
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 1 cut(s) 972
BsmAI GTCTC 4 cut(s) 21, 851, 1354, 1738
BsmFI GGGAC 1 cut(s) 18
BsmI GAATGC 2 cut(s) 1391, 1643
BsnI GGCC 3 cut(s) 278, 996, 1095
Bsp119I TTCGAA 1 cut(s) 1120
Bsp1286I GDGCHC 2 cut(s) 596, 1147
Bsp143I GATC 4 cut(s) 33, 316, 673, 1600
Bsp19I CCATGG 1 cut(s) 153
BspACI CCGC 7 cut(s) 279, 281, 433, 435, 707, 935, 1276
BspANI GGCC 3 cut(s) 278, 996, 1095
BspCNI CTCAG 4 cut(s) 281, 664, 855, 1201
BspDI ATCGAT 1 cut(s) 627
BspFNI CGCG 4 cut(s) 281, 372, 435, 1276
BspHI TCATGA 2 cut(s) 808, 1147
BspPI GGATC 1 cut(s) 324
BspQI GCTCTTC 1 cut(s) 1104
BspT104I TTCGAA 1 cut(s) 1120
BsrDI GCAATG 1 cut(s) 325
BsrI ACTGG 6 cut(s) 100, 216, 411, 1355, 1370, 1640
BssECI CCNNGG 5 cut(s) 153, 279, 433, 966, 1611
BssMI GATC 4 cut(s) 33, 316, 673, 1600
BssT1I CCWWGG 2 cut(s) 153, 966
Bst2UI CCWGG 1 cut(s) 1612
Bst4CI ACNGT 1 cut(s) 477
Bst6I CTCTTC 5 cut(s) 24, 85, 296, 1104, 1741
BstBAI YACGTR 1 cut(s) 429
BstBI TTCGAA 1 cut(s) 1120
BstC8I GCNNGC 5 cut(s) 265, 848, 1212, 1317, 1586
BstDEI CTNAG 5 cut(s) 268, 320, 651, 842, 1188
BstDSI CCRYGG 3 cut(s) 153, 279, 433
BstENI CCTNNNNNAGG 1 cut(s) 970
BstF5I GGATG 4 cut(s) 801, 859, 1214, 1627
BstFNI CGCG 4 cut(s) 281, 372, 435, 1276
BstH2I RGCGCY 2 cut(s) 222, 1010
BstHHI GCGC 2 cut(s) 221, 1009
BstKTI GATC 4 cut(s) 36, 319, 676, 1603
BstMAI GTCTC 4 cut(s) 21, 851, 1354, 1738
BstMBI GATC 4 cut(s) 33, 316, 673, 1600
BstMWI GCNNNNNNNGC 4 cut(s) 96, 572, 760, 1015
BstNI CCWGG 1 cut(s) 1612
BstNSI RCATGY 2 cut(s) 267, 1730
BstSCI CCNGG 1 cut(s) 1610
BstUI CGCG 4 cut(s) 281, 372, 435, 1276
BstV1I GCAGC 3 cut(s) 775, 1087, 1477
BstV2I GAAGAC 1 cut(s) 897
BstX2I RGATCY 1 cut(s) 316
BstYI RGATCY 1 cut(s) 316
Bsu15I ATCGAT 1 cut(s) 627
BsuRI GGCC 3 cut(s) 278, 996, 1095
BsuTUI ATCGAT 1 cut(s) 627
BtgI CCRYGG 3 cut(s) 153, 279, 433
BtsCI GGATG 4 cut(s) 801, 859, 1214, 1627
BtsI GCAGTG 1 cut(s) 1259
BtsIMutI CAGTG 6 cut(s) 93, 180, 1025, 1259, 1362, 1363
Cac8I GCNNGC 5 cut(s) 265, 848, 1212, 1317, 1586
CaiI CAGNNNCTG 1 cut(s) 1027
CciI TCATGA 2 cut(s) 808, 1147
CfoI GCGC 2 cut(s) 221, 1009
Cfr13I GGNCC 1 cut(s) 75
Cfr42I CCGCGG 2 cut(s) 282, 436
ClaI ATCGAT 1 cut(s) 627
CseI GACGC 1 cut(s) 1265
Csp6I GTAC 1 cut(s) 430
CviQI GTAC 1 cut(s) 430
DdeI CTNAG 5 cut(s) 268, 320, 651, 842, 1188
DpnI GATC 4 cut(s) 35, 318, 675, 1602
DpnII GATC 4 cut(s) 33, 316, 673, 1600
DrdI GACNNNNNNGTC 1 cut(s) 1157
DseDI GACNNNNNNGTC 1 cut(s) 1157
EaeI YGGCCR 2 cut(s) 276, 994
Eam1104I CTCTTC 5 cut(s) 24, 85, 296, 1104, 1741
EarI CTCTTC 5 cut(s) 24, 85, 296, 1104, 1741
EciI GGCGGA 1 cut(s) 950
Ecl136II GAGCTC 1 cut(s) 1145
Eco130I CCWWGG 2 cut(s) 153, 966
Eco24I GRGCYC 2 cut(s) 596, 1147
Eco32I GATATC 1 cut(s) 136
Eco47I GGWCC 1 cut(s) 75
Eco47III AGCGCT 1 cut(s) 1008
Eco53kI GAGCTC 1 cut(s) 1145
Eco57I CTGAAG 3 cut(s) 794, 1004, 1023
EcoICRI GAGCTC 1 cut(s) 1145
EcoNI CCTNNNNNAGG 1 cut(s) 970
EcoRII CCWGG 1 cut(s) 1610
EcoRV GATATC 1 cut(s) 136
EcoT14I CCWWGG 2 cut(s) 153, 966
EcoT38I GRGCYC 2 cut(s) 596, 1147
ErhI CCWWGG 2 cut(s) 153, 966
FalI AAGNNNNNCTT 6 cut(s) 340, 372, 767, 799, 1101, 1133
FaqI GGGAC 1 cut(s) 18
FbaI TGATCA 1 cut(s) 673
Fnu4HI GCNGC 4 cut(s) 279, 764, 1076, 1491
FokI GGATG 4 cut(s) 808, 866, 1201, 1634
FriOI GRGCYC 2 cut(s) 596, 1147
Fsp4HI GCNGC 4 cut(s) 279, 764, 1076, 1491
FspBI CTAG 3 cut(s) 201, 1157, 1746
GlaI GCGC 2 cut(s) 220, 1008
GluI GCNGC 4 cut(s) 279, 764, 1076, 1491
HaeII RGCGCY 2 cut(s) 222, 1010
HaeIII GGCC 3 cut(s) 278, 996, 1095
HapII CCGG 1 cut(s) 87
HgaI GACGC 1 cut(s) 1265
HhaI GCGC 2 cut(s) 221, 1009
Hin6I GCGC 2 cut(s) 219, 1007
HinP1I GCGC 2 cut(s) 219, 1007
HincII GTYRAC 3 cut(s) 193, 1332, 1651
HindII GTYRAC 3 cut(s) 193, 1332, 1651
HindIII AAGCTT 1 cut(s) 1582
HpaI GTTAAC 1 cut(s) 1332
HpaII CCGG 1 cut(s) 87
HphI GGTGA 2 cut(s) 523, 695
Hpy166II GTNNAC 4 cut(s) 193, 559, 1332, 1651
Hpy188III TCNNGA 6 cut(s) 31, 345, 480, 809, 1148, 1190
Hpy8I GTNNAC 4 cut(s) 193, 559, 1332, 1651
Hpy99I CGWCG 1 cut(s) 1259
HpyAV CCTTC 3 cut(s) 769, 1424, 1505
HpyCH4III ACNGT 1 cut(s) 477
HpyCH4IV ACGT 3 cut(s) 187, 428, 1473
HpyF10VI GCNNNNNNNGC 4 cut(s) 96, 572, 760, 1015
HpyF3I CTNAG 5 cut(s) 268, 320, 651, 842, 1188
HpySE526I ACGT 3 cut(s) 187, 428, 1473
HspAI GCGC 2 cut(s) 219, 1007
Ksp22I TGATCA 1 cut(s) 673
KspAI GTTAAC 1 cut(s) 1332
KspI CCGCGG 2 cut(s) 282, 436
Kzo9I GATC 4 cut(s) 33, 316, 673, 1600
LguI GCTCTTC 1 cut(s) 1104
LmnI GCTCC 1 cut(s) 260
Lsp1109I GCAGC 3 cut(s) 775, 1087, 1477
LweI GCATC 5 cut(s) 229, 406, 502, 1223, 1433
MaeI CTAG 3 cut(s) 201, 1157, 1746
MaeII ACGT 3 cut(s) 187, 428, 1473
MaeIII GTNAC 2 cut(s) 471, 1023
MalI GATC 4 cut(s) 35, 318, 675, 1602
MboI GATC 4 cut(s) 33, 316, 673, 1600
MfeI CAATTG 1 cut(s) 743
MflI RGATCY 1 cut(s) 316
MhlI GDGCHC 2 cut(s) 596, 1147
MlsI TGGCCA 1 cut(s) 996
MluNI TGGCCA 1 cut(s) 996
MlyI GAGTC 1 cut(s) 1441
MmeI TCCRAC 3 cut(s) 871, 1496, 1693
MnlI CCTC 9 cut(s) 88, 120, 242, 291, 583, 697, 748, 1564, 1567
Mox20I TGGCCA 1 cut(s) 996
MroXI GAANNNNTTC 1 cut(s) 1113
MscI TGGCCA 1 cut(s) 996
MseI TTAA 2 cut(s) 1011, 1331
MslI CAYNNNNRTG 3 cut(s) 681, 1310, 1325
Msp20I TGGCCA 1 cut(s) 996
MspA1I CMGCKG 2 cut(s) 281, 435
MspI CCGG 1 cut(s) 87
MspR9I CCNGG 1 cut(s) 1612
MunI CAATTG 1 cut(s) 743
Mva1269I GAATGC 2 cut(s) 1391, 1643
MvaI CCWGG 1 cut(s) 1612
MvnI CGCG 4 cut(s) 281, 372, 435, 1276
MwoI GCNNNNNNNGC 4 cut(s) 96, 572, 760, 1015
NcoI CCATGG 1 cut(s) 153
NdeII GATC 4 cut(s) 33, 316, 673, 1600
NmeAIII GCCGAG 1 cut(s) 169
NmuCI GTSAC 1 cut(s) 1023
NspI RCATGY 2 cut(s) 267, 1730
NspV TTCGAA 1 cut(s) 1120
OliI CACNNNNGTG 1 cut(s) 681
PaeI GCATGC 1 cut(s) 267
PagI TCATGA 2 cut(s) 808, 1147
PciSI GCTCTTC 1 cut(s) 1104
PctI GAATGC 2 cut(s) 1391, 1643
PdmI GAANNNNTTC 1 cut(s) 1113
PkrI GCNGC 4 cut(s) 280, 765, 1077, 1492
PleI GAGTC 1 cut(s) 1441
PpsI GAGTC 1 cut(s) 1441
Ppu21I YACGTR 1 cut(s) 429
PsiI TTATAA 1 cut(s) 1580
Psp124BI GAGCTC 1 cut(s) 1147
Psp1406I AACGTT 1 cut(s) 1473
Psp6I CCWGG 1 cut(s) 1610
PspGI CCWGG 1 cut(s) 1610
PspPI GGNCC 1 cut(s) 75
PstNI CAGNNNCTG 1 cut(s) 1027
PsuI RGATCY 1 cut(s) 316
RsaI GTAC 1 cut(s) 431
RsaNI GTAC 1 cut(s) 430
RseI CAYNNNNRTG 3 cut(s) 681, 1310, 1325
SacI GAGCTC 1 cut(s) 1147
SacII CCGCGG 2 cut(s) 282, 436
SapI GCTCTTC 1 cut(s) 1104
SaqAI TTAA 2 cut(s) 1011, 1331
SatI GCNGC 4 cut(s) 279, 764, 1076, 1491
Sau3AI GATC 4 cut(s) 33, 316, 673, 1600
Sau96I GGNCC 1 cut(s) 75
SchI GAGTC 1 cut(s) 1441
ScrFI CCNGG 1 cut(s) 1612
SduI GDGCHC 2 cut(s) 596, 1147
SfaNI GCATC 5 cut(s) 229, 406, 502, 1223, 1433
Sfr303I CCGCGG 2 cut(s) 282, 436
SfuI TTCGAA 1 cut(s) 1120
SgrBI CCGCGG 2 cut(s) 282, 436
SinI GGWCC 1 cut(s) 75
SmiMI CAYNNNNRTG 3 cut(s) 681, 1310, 1325
SmlI CTYRAG 1 cut(s) 49
SmoI CTYRAG 1 cut(s) 49
SphI GCATGC 1 cut(s) 267
SsiI CCGC 7 cut(s) 279, 281, 433, 435, 707, 935, 1276
SspI AATATT 2 cut(s) 255, 1071
SspMI CTAG 3 cut(s) 201, 1157, 1746
SstI GAGCTC 1 cut(s) 1147
StyD4I CCNGG 1 cut(s) 1610
StyI CCWWGG 2 cut(s) 153, 966
TaaI ACNGT 1 cut(s) 477
TaiI ACGT 3 cut(s) 190, 431, 1476
TaqI TCGA 5 cut(s) 596, 627, 1120, 1161, 1417
TauI GCSGC 1 cut(s) 281
Tru1I TTAA 2 cut(s) 1011, 1331
Tru9I TTAA 2 cut(s) 1011, 1331
TscAI CASTG 6 cut(s) 100, 187, 1032, 1266, 1362, 1370
TseFI GTSAC 1 cut(s) 1023
TseI GCWGC 3 cut(s) 763, 1075, 1490
Tsp45I GTSAC 1 cut(s) 1023
TspGWI ACGGA 3 cut(s) 515, 1459, 1700
TspRI CASTG 6 cut(s) 100, 187, 1032, 1266, 1362, 1370
VpaK11BI GGWCC 1 cut(s) 75
XagI CCTNNNNNAGG 1 cut(s) 970
XapI RAATTY 4 cut(s) 483, 1034, 1165, 1403
XceI RCATGY 2 cut(s) 267, 1730
XcmI CCANNNNNNNNNTGG 1 cut(s) 1362
XmnI GAANNNNTTC 1 cut(s) 1113
XspI CTAG 3 cut(s) 201, 1157, 1746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.