Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001722

Physical Location & Seq

Genomic Coordinates Forward (+)

60618616 .. 60621257

Gene Structure 2642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ51308

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGAGGACTAGTAGAGATTACATACATTTTTTTAATTTTTTTGTTACTGTATTGCAGGTTTGTTTAGATTGGCGAAATAGTACTTCATATAACACTCAGATGGGTCGTCAGTGTTGTTATCTTCTAATTCTGCTAATTCTAGCATTGGCTTCAGCAAAGTCTCACTCATGGAGTTGGTTCCCTTCTTCAGAAGAGACTCAATCTACTGATGAGAACCCTTCTATTAGTGGAACTTCAGTTGGCAGGTTTTCCATGGAAGGTCATAATGATGACCCCAAGGCAATCAGACTTGTTGAAGATGCAGAGAAGAAGTTGGCAGGTCCAAACTCTTGTTGGCAAAATGCTTATCGGCATCTCTTTTCGGGGTGCTCGGAGGTCCATGCCGTTGAAGAGAAGCGCTCAAGATTTGCTTGGCATCTGAGTGATTGCTTTCAGAAGGACTCTGCAAGGCCTCCTTTTCCTTCATGTGACCCGAAATCTGCAATGTATAAATGCTTGAAAACTTTGAACGATGATCAGCACAAGGTCTATTTGGAATTCTACCTCGAAACTAACTCAATATGCCATCAGTTGCAGGCTCGCGCATTTAAGTTTGAAACAGAGAGAATTGTGAATGAACTTAAAAATTCAGCTCAGTATGCAGAAGGCAAGTTGGAAGTAATTGAAGAGAAGGCAGAGCATCTACTGCAGGGGTCAAATCAAATATTTGAGTCTTTGAATTCGATTGATCTTCGAACACAGCAAGTTGCTCAGACTGCACAGAATGTGGAAGATCATATAGATGTGGTGTTGAAGCATTCCGCAGCAGTTTATGAGCAATCAAGGAAAATCCAAGATTCTCAATCTGAGCTGCAAGAAGGACAAGTAGAAATGAAGAAAAATTTGAAGGAAGGAATGGCAATGTTGCAGGATTCATACAGCCATTTGGGACAAGAAATCGATAACTTGAAAAATGAAGCTGTTGAAGTTGAAAAAGAGATAACCAAAGTCGGAGACCAAATGTCGTCTAGGATGGAGAATCTGCAGGTCAAAGCAGATGACATTAGGAATATGGCAGGGCTCTCTTTGGACAAGCAAAAGCAGCTTCTAGATGGACAAACAACAGCTCTCAAGGAGCTCGACTTTTTAACCAAATTTCAATCCGAGGCACTAGAAGAGAGCAGGAAAACCCTACAACGGTTAACTGAATATGGTCACAGACAACAAGAAGAGCTTCTTCAGAAGCAACTACAGCTTCAAAAAGTTCATGATCACCTGATGGAAAACTCAAAGTCAATGTTGGAGGCACAGGAATCTTTTGAATCAAAGCAAGCCAGTATGTTCGCCGCATTAGACAAGCTATTGGCTTTGCACAATGCTATGCTGCTTGAATCACGGTTGATCAAAGCTTTCTTTATTTACTCTATATCAATGTTTGCTATCTACATGTTCACAAGCACAAAGCGAACATACACAGTTAGACCTCGTCTATATATCGGGCTGTGTTTGACTCTCTTAGTAGAAGTAGCAATACTTCGGCTCACAGGGCATGATATTGAACAGCAAACATGGAAGATAAACCTTCTCAGGTCTCTTTTTGCAGCGACTGCTTTAGTTCAGCTAATGCATGCAATTTTCACATACAGGGACTATGAAGTATTGAACCATCAACTATTGCATACATTGATTGAGAAGGTTAATGGCATTCAGAGATACCAGAAGTTCTCTTGGGATGAAGATAGTGATTTGAACTGGTCCTCTTGGCTGGACAGCAACTTACCAGAAGATGAAGACTGTTCTGAAGACCCTGACTACTTAGTTCCCGAACAAGTTGGGGACAATTTAATCACAGCTTCAAGTATCAAAGAATATGATCTCCGTCAACGTCTTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0007275 GO:0008150 GO:0009553 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0010154 GO:0016020 GO:0016021 GO:0022414 GO:0031224 GO:0031226 GO:0032501 GO:0032502 GO:0042802 GO:0044425 GO:0044459 GO:0044464 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

624

Amino Acids

72.16

Weight (kDa)

5.43

Isoelectric Point (pI)

50.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001722)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490 AT5G55490
fragaria_vesca	FvH4_6g33230 FvH4_6g41730
malus_domestica	MD09G1119800.v1.1 MD09G1266100.v1.1 MD17G1110600.v1.1
prunus_persica	Prupe.3G163900_v2.0.a1 Prupe.3G204300_v2.0.a1 Prupe.3G204300_v2.0.a1
pyrus_communis	pycom07g05510
rosa_chinensis	RchiOBHm_Chr2g0139401 RchiOBHm_Chr2g0142951 RchiOBHm_Chr2g0157531
rosa_laevigata	RLG00000020000 RLG00000020995
rosa_multiflora	Rmu_co8048568.1_g000001 Rmu_sc0000083.1_g000018 Rmu_sc0002277.1_g000037 Rmu_sc0036081.1_g000001 Rmu_sc0036082.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092150 Rroxscaffold_2G00102200 Rroxscaffold_2G00147380
rosa_rugosa	Rorug02G0377400 Rorug02G0461800
rosa_samantha	Rh1CG268300 Rh2AG430400 Rh2AG525900 Rh2BG439400 Rh2BG540600 Rh2CG416100 Rh2CG510600 Rh2DG449400 Rh2DG549100 Rh4BG060600 Rh4CG066400 Rh5DG444200 Rh7DG175700
rosa_wichuraiana	Rw2G035150 Rw2G043560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	4 cut(s)	46, 234, 308, 1015
AccII	CGCG	1 cut(s)	582
AciI	CCGC	2 cut(s)	801, 1326
AcsI	RAATTY	5 cut(s)	536, 625, 718, 880, 1133
AcuI	CTGAAG	5 cut(s)	135, 171, 219, 1202, 1800
AfaI	GTAC	1 cut(s)	82
AfeI	AGCGCT	1 cut(s)	398
AfiI	CCNNNNNNNGG	1 cut(s)	1176
AflIII	ACRYGT	1 cut(s)	1425
AhdI	GACNNNNNGTC	1 cut(s)	1000
AhlI	ACTAGT	1 cut(s)	8
Alw21I	GWGCWC	2 cut(s)	371, 1119
Alw26I	GTCTC	4 cut(s)	165, 188, 987, 1575
AlwNI	CAGNNNCTG	1 cut(s)	1586
Aor51HI	AGCGCT	1 cut(s)	398
AoxI	GGCC	1 cut(s)	449
ApeKI	GCWGC	5 cut(s)	803, 850, 1081, 1363, 1580
ApoI	RAATTY	5 cut(s)	536, 625, 718, 880, 1133
Asp700I	GAANNNNTTC	1 cut(s)	1212
AspLEI	GCGC	2 cut(s)	399, 584
AspS9I	GGNCC	3 cut(s)	320, 376, 1734
AsuHPI	GGTGA	1 cut(s)	1244
AsuII	TTCGAA	1 cut(s)	733
AvaII	GGWCC	3 cut(s)	320, 376, 1734
BanII	GRGCYC	2 cut(s)	1062, 1119
BarI	GAAGNNNNNNTAC	4 cut(s)	1494, 1497, 1526, 1529
BbsI	GAAGAC	3 cut(s)	1776, 1788, 1859
Bbv12I	GWGCWC	2 cut(s)	371, 1119
BbvI	GCAGC	5 cut(s)	815, 837, 1093, 1350, 1592
BccI	CCATC	6 cut(s)	94, 573, 1006, 1085, 1252, 1653
BceAI	ACGGC	1 cut(s)	368
BclI	TGATCA	3 cut(s)	514, 1249, 1380
BcoDI	GTCTC	4 cut(s)	165, 188, 987, 1575
BcuI	ACTAGT	1 cut(s)	8
BfaI	CTAG	5 cut(s)	9, 140, 1008, 1088, 1151
BfmI	CTRYAG	3 cut(s)	686, 1022, 1229
BfoI	RGCGCY	1 cut(s)	400
BfuAI	ACCTGC	4 cut(s)	46, 234, 308, 1015
BisI	GCNGC	6 cut(s)	804, 851, 1082, 1326, 1364, 1581
BlsI	GCNGC	6 cut(s)	805, 852, 1083, 1327, 1365, 1582
BmcAI	AGTACT	1 cut(s)	82
Bme18I	GGWCC	3 cut(s)	320, 376, 1734
BmeRI	GACNNNNNGTC	1 cut(s)	1000
BmgT120I	GGNCC	3 cut(s)	320, 376, 1734
BmiI	GGNNCC	1 cut(s)	179
BmsI	GCATC	4 cut(s)	289, 361, 424, 688
BpiI	GAAGAC	3 cut(s)	1776, 1788, 1859
BplI	GAGNNNNNCTC	2 cut(s)	383, 415
Bpu14I	TTCGAA	1 cut(s)	733
BpuEI	CTTGAG	2 cut(s)	385, 1094
Bsa29I	ATCGAT	1 cut(s)	939
BsaI	GGTCTC	2 cut(s)	987, 1575
BsaJI	CCNNGG	3 cut(s)	252, 276, 1143
Bsc4I	CCNNNNNNNGG	1 cut(s)	1176
Bse1I	ACTGG	2 cut(s)	1314, 1736
Bse3DI	GCAATG	2 cut(s)	489, 906
BseCI	ATCGAT	1 cut(s)	939
BseDI	CCNNGG	3 cut(s)	252, 276, 1143
BseGI	GGATG	2 cut(s)	1017, 1717
BseLI	CCNNNNNNNGG	1 cut(s)	1176
BseMI	GCAATG	2 cut(s)	489, 906
BseMII	CTCAG	6 cut(s)	110, 410, 647, 764, 837, 1579
BseNI	ACTGG	2 cut(s)	1314, 1736
BseXI	GCAGC	5 cut(s)	815, 837, 1093, 1350, 1592
BsgI	GTGCAG	1 cut(s)	741
Bsh1236I	CGCG	1 cut(s)	582
BshFI	GGCC	1 cut(s)	451
BshVI	ATCGAT	1 cut(s)	939
BsiHKAI	GWGCWC	2 cut(s)	371, 1119
BslFI	GGGAC	3 cut(s)	942, 1640, 1829
BslI	CCNNNNNNNGG	1 cut(s)	1176
BsmAI	GTCTC	4 cut(s)	165, 188, 987, 1575
BsmFI	GGGAC	3 cut(s)	942, 1640, 1829
BsmI	GAATGC	2 cut(s)	796, 1683
BsnI	GGCC	1 cut(s)	451
Bso31I	GGTCTC	2 cut(s)	987, 1575
Bsp119I	TTCGAA	1 cut(s)	733
Bsp1286I	GDGCHC	3 cut(s)	371, 1062, 1119
Bsp143I	GATC	6 cut(s)	514, 727, 772, 1249, 1380, 1852
Bsp19I	CCATGG	1 cut(s)	252
BspACI	CCGC	2 cut(s)	801, 1326
BspANI	GGCC	1 cut(s)	451
BspCNI	CTCAG	6 cut(s)	109, 411, 646, 763, 838, 1578
BspDI	ATCGAT	1 cut(s)	939
BspFNI	CGCG	1 cut(s)	582
BspHI	TCATGA	1 cut(s)	1246
BspLI	GGNNCC	1 cut(s)	179
BspMAI	CTGCAG	2 cut(s)	690, 1026
BspMI	ACCTGC	4 cut(s)	46, 234, 308, 1015
BspQI	GCTCTTC	1 cut(s)	1203
BspT104I	TTCGAA	1 cut(s)	733
BspTNI	GGTCTC	2 cut(s)	987, 1575
BsrDI	GCAATG	2 cut(s)	489, 906
BsrI	ACTGG	2 cut(s)	1314, 1736
BssECI	CCNNGG	3 cut(s)	252, 276, 1143
BssMI	GATC	6 cut(s)	514, 727, 772, 1249, 1380, 1852
BssT1I	CCWWGG	2 cut(s)	252, 276
Bst4CI	ACNGT	5 cut(s)	49, 1179, 1377, 1456, 1775
Bst6I	CTCTTC	5 cut(s)	186, 384, 660, 1149, 1203
BstAPI	GCANNNNNTGC	2 cut(s)	685, 1586
BstBI	TTCGAA	1 cut(s)	733
BstC8I	GCNNGC	4 cut(s)	576, 580, 1311, 1608
BstDEI	CTNAG	8 cut(s)	96, 419, 633, 750, 846, 1495, 1565, 1795
BstDSI	CCRYGG	1 cut(s)	252
BstF5I	GGATG	2 cut(s)	1017, 1717
BstFNI	CGCG	1 cut(s)	582
BstH2I	RGCGCY	1 cut(s)	400
BstHHI	GCGC	2 cut(s)	399, 584
BstKTI	GATC	6 cut(s)	517, 730, 775, 1252, 1383, 1855
BstMAI	GTCTC	4 cut(s)	165, 188, 987, 1575
BstMBI	GATC	6 cut(s)	514, 727, 772, 1249, 1380, 1852
BstMWI	GCNNNNNNNGC	7 cut(s)	638, 685, 755, 1081, 1231, 1525, 1586
BstNSI	RCATGY	2 cut(s)	1429, 1610
BstSFI	CTRYAG	3 cut(s)	686, 1022, 1229
BstUI	CGCG	1 cut(s)	582
BstV1I	GCAGC	5 cut(s)	815, 837, 1093, 1350, 1592
BstV2I	GAAGAC	3 cut(s)	1776, 1788, 1859
Bsu15I	ATCGAT	1 cut(s)	939
BsuRI	GGCC	1 cut(s)	451
BsuTUI	ATCGAT	1 cut(s)	939
BtgI	CCRYGG	1 cut(s)	252
BtsCI	GGATG	2 cut(s)	1017, 1717
BtsIMutI	CAGTG	1 cut(s)	116
BveI	ACCTGC	4 cut(s)	46, 234, 308, 1015
Cac8I	GCNNGC	4 cut(s)	576, 580, 1311, 1608
CaiI	CAGNNNCTG	1 cut(s)	1586
CciI	TCATGA	1 cut(s)	1246
CfoI	GCGC	2 cut(s)	399, 584
Cfr13I	GGNCC	3 cut(s)	320, 376, 1734
ClaI	ATCGAT	1 cut(s)	939
Csp6I	GTAC	1 cut(s)	81
CviAII	CATG	9 cut(s)	168, 253, 380, 465, 1247, 1426, 1529, 1548, 1607
CviQI	GTAC	1 cut(s)	81
DdeI	CTNAG	8 cut(s)	96, 419, 633, 750, 846, 1495, 1565, 1795
DpnI	GATC	6 cut(s)	516, 729, 774, 1251, 1382, 1854
DpnII	GATC	6 cut(s)	514, 727, 772, 1249, 1380, 1852
DriI	GACNNNNNGTC	1 cut(s)	1000
Eam1104I	CTCTTC	5 cut(s)	186, 384, 660, 1149, 1203
Eam1105I	GACNNNNNGTC	1 cut(s)	1000
EarI	CTCTTC	5 cut(s)	186, 384, 660, 1149, 1203
Ecl136II	GAGCTC	1 cut(s)	1117
Eco130I	CCWWGG	2 cut(s)	252, 276
Eco147I	AGGCCT	1 cut(s)	451
Eco24I	GRGCYC	2 cut(s)	1062, 1119
Eco31I	GGTCTC	2 cut(s)	987, 1575
Eco47I	GGWCC	3 cut(s)	320, 376, 1734
Eco47III	AGCGCT	1 cut(s)	398
Eco53kI	GAGCTC	1 cut(s)	1117
Eco57I	CTGAAG	5 cut(s)	135, 171, 219, 1202, 1800
EcoICRI	GAGCTC	1 cut(s)	1117
EcoRI	GAATTC	2 cut(s)	536, 718
EcoT14I	CCWWGG	2 cut(s)	252, 276
EcoT22I	ATGCAT	1 cut(s)	1608
EcoT38I	GRGCYC	2 cut(s)	1062, 1119
ErhI	CCWWGG	2 cut(s)	252, 276
FaeI	CATG	9 cut(s)	171, 256, 383, 468, 1250, 1429, 1532, 1551, 1610
FalI	AAGNNNNNCTT	8 cut(s)	394, 426, 439, 471, 1197, 1229, 1200, 1232
FaqI	GGGAC	3 cut(s)	942, 1640, 1829
FatI	CATG	9 cut(s)	167, 252, 379, 464, 1246, 1425, 1528, 1547, 1606
FbaI	TGATCA	3 cut(s)	514, 1249, 1380
Fnu4HI	GCNGC	6 cut(s)	804, 851, 1082, 1326, 1364, 1581
FokI	GGATG	2 cut(s)	1024, 1724
FriOI	GRGCYC	2 cut(s)	1062, 1119
Fsp4HI	GCNGC	6 cut(s)	804, 851, 1082, 1326, 1364, 1581
FspBI	CTAG	5 cut(s)	9, 140, 1008, 1088, 1151
GlaI	GCGC	2 cut(s)	398, 583
GluI	GCNGC	6 cut(s)	804, 851, 1082, 1326, 1364, 1581
HaeII	RGCGCY	1 cut(s)	400
HaeIII	GGCC	1 cut(s)	451
HhaI	GCGC	2 cut(s)	399, 584
Hin1II	CATG	9 cut(s)	171, 256, 383, 468, 1250, 1429, 1532, 1551, 1610
Hin6I	GCGC	2 cut(s)	397, 582
HinP1I	GCGC	2 cut(s)	397, 582
HincII	GTYRAC	2 cut(s)	1182, 1862
HindII	GTYRAC	2 cut(s)	1182, 1862
HindIII	AAGCTT	1 cut(s)	1386
HpaI	GTTAAC	1 cut(s)	1182
HphI	GGTGA	1 cut(s)	1244
Hpy166II	GTNNAC	3 cut(s)	1182, 1431, 1862
Hpy188III	TCNNGA	4 cut(s)	402, 1088, 1247, 1802
Hpy8I	GTNNAC	3 cut(s)	1182, 1431, 1862
HpyCH4III	ACNGT	5 cut(s)	49, 1179, 1377, 1456, 1775
HpyCH4IV	ACGT	1 cut(s)	1864
HpyF10VI	GCNNNNNNNGC	7 cut(s)	638, 685, 755, 1081, 1231, 1525, 1586
HpyF3I	CTNAG	8 cut(s)	96, 419, 633, 750, 846, 1495, 1565, 1795
HpySE526I	ACGT	1 cut(s)	1864
Hsp92II	CATG	9 cut(s)	171, 256, 383, 468, 1250, 1429, 1532, 1551, 1610
HspAI	GCGC	2 cut(s)	397, 582
Ksp22I	TGATCA	3 cut(s)	514, 1249, 1380
KspAI	GTTAAC	1 cut(s)	1182
Kzo9I	GATC	6 cut(s)	514, 727, 772, 1249, 1380, 1852
LguI	GCTCTTC	1 cut(s)	1203
LmnI	GCTCC	1 cut(s)	1114
Lsp1109I	GCAGC	5 cut(s)	815, 837, 1093, 1350, 1592
LweI	GCATC	4 cut(s)	289, 361, 424, 688
MaeI	CTAG	5 cut(s)	9, 140, 1008, 1088, 1151
MaeII	ACGT	1 cut(s)	1864
MaeIII	GTNAC	3 cut(s)	43, 467, 1193
MalI	GATC	6 cut(s)	516, 729, 774, 1251, 1382, 1854
MboI	GATC	6 cut(s)	514, 727, 772, 1249, 1380, 1852
MhlI	GDGCHC	3 cut(s)	371, 1062, 1119
MlyI	GAGTC	4 cut(s)	190, 434, 719, 1483
MmeI	TCCRAC	3 cut(s)	633, 970, 1260
MnlI	CCTC	7 cut(s)	367, 462, 554, 1138, 1276, 1473, 1747
Mph1103I	ATGCAT	1 cut(s)	1608
MroXI	GAANNNNTTC	1 cut(s)	1212
MseI	TTAA	7 cut(s)	33, 588, 621, 1127, 1181, 1677, 1823
MslI	CAYNNNNRTG	4 cut(s)	98, 267, 420, 780
Mva1269I	GAATGC	2 cut(s)	796, 1683
MvnI	CGCG	1 cut(s)	582
MwoI	GCNNNNNNNGC	7 cut(s)	638, 685, 755, 1081, 1231, 1525, 1586
NcoI	CCATGG	1 cut(s)	252
NdeII	GATC	6 cut(s)	514, 727, 772, 1249, 1380, 1852
NlaIII	CATG	9 cut(s)	171, 256, 383, 468, 1250, 1429, 1532, 1551, 1610
NlaIV	GGNNCC	1 cut(s)	179
NmuCI	GTSAC	2 cut(s)	467, 1193
NsiI	ATGCAT	1 cut(s)	1608
NspI	RCATGY	2 cut(s)	1429, 1610
NspV	TTCGAA	1 cut(s)	733
PaeI	GCATGC	1 cut(s)	1610
PagI	TCATGA	1 cut(s)	1246
PceI	AGGCCT	1 cut(s)	451
PciI	ACATGT	1 cut(s)	1425
PciSI	GCTCTTC	1 cut(s)	1203
PctI	GAATGC	2 cut(s)	796, 1683
PdmI	GAANNNNTTC	1 cut(s)	1212
PfeI	GAWTC	6 cut(s)	836, 911, 1018, 1292, 1301, 1370
PflFI	GACNNNGTC	1 cut(s)	1464
PkrI	GCNGC	6 cut(s)	805, 852, 1083, 1327, 1365, 1582
PleI	GAGTC	4 cut(s)	190, 434, 718, 1483
PpsI	GAGTC	4 cut(s)	190, 434, 718, 1483
PscI	ACATGT	1 cut(s)	1425
Psp124BI	GAGCTC	1 cut(s)	1119
PspN4I	GGNNCC	1 cut(s)	179
PspPI	GGNCC	3 cut(s)	320, 376, 1734
PstI	CTGCAG	2 cut(s)	690, 1026
PstNI	CAGNNNCTG	1 cut(s)	1586
PsyI	GACNNNGTC	1 cut(s)	1464
RsaI	GTAC	1 cut(s)	82
RsaNI	GTAC	1 cut(s)	81
RseI	CAYNNNNRTG	4 cut(s)	98, 267, 420, 780
SacI	GAGCTC	1 cut(s)	1119
SapI	GCTCTTC	1 cut(s)	1203
SaqAI	TTAA	7 cut(s)	33, 588, 621, 1127, 1181, 1677, 1823
SatI	GCNGC	6 cut(s)	804, 851, 1082, 1326, 1364, 1581
Sau3AI	GATC	6 cut(s)	514, 727, 772, 1249, 1380, 1852
Sau96I	GGNCC	3 cut(s)	320, 376, 1734
ScaI	AGTACT	1 cut(s)	82
SchI	GAGTC	4 cut(s)	190, 434, 719, 1483
SduI	GDGCHC	3 cut(s)	371, 1062, 1119
SfaNI	GCATC	4 cut(s)	289, 361, 424, 688
SfcI	CTRYAG	3 cut(s)	686, 1022, 1229
SfuI	TTCGAA	1 cut(s)	733
SinI	GGWCC	3 cut(s)	320, 376, 1734
SmiMI	CAYNNNNRTG	4 cut(s)	98, 267, 420, 780
SmlI	CTYRAG	2 cut(s)	400, 1109
SmoI	CTYRAG	2 cut(s)	400, 1109
SpeI	ACTAGT	1 cut(s)	8
SphI	GCATGC	1 cut(s)	1610
SseBI	AGGCCT	1 cut(s)	451
SsiI	CCGC	2 cut(s)	801, 1326
SspI	AATATT	1 cut(s)	705
SspMI	CTAG	5 cut(s)	9, 140, 1008, 1088, 1151
SstI	GAGCTC	1 cut(s)	1119
StuI	AGGCCT	1 cut(s)	451
StyI	CCWWGG	2 cut(s)	252, 276
TaaI	ACNGT	5 cut(s)	49, 1179, 1377, 1456, 1775
TaiI	ACGT	1 cut(s)	1867
TaqI	TCGA	5 cut(s)	546, 722, 733, 939, 1119
TatI	WGTACW	1 cut(s)	80
TauI	GCSGC	1 cut(s)	1328
TfiI	GAWTC	6 cut(s)	836, 911, 1018, 1292, 1301, 1370
Tru1I	TTAA	7 cut(s)	33, 588, 621, 1127, 1181, 1677, 1823
Tru9I	TTAA	7 cut(s)	33, 588, 621, 1127, 1181, 1677, 1823
TscAI	CASTG	1 cut(s)	116
TseFI	GTSAC	2 cut(s)	467, 1193
TseI	GCWGC	5 cut(s)	803, 850, 1081, 1363, 1580
Tsp45I	GTSAC	2 cut(s)	467, 1193
TspGWI	ACGGA	1 cut(s)	1847
TspRI	CASTG	1 cut(s)	116
Tth111I	GACNNNGTC	1 cut(s)	1464
VpaK11BI	GGWCC	3 cut(s)	320, 376, 1734
XapI	RAATTY	5 cut(s)	536, 625, 718, 880, 1133
XbaI	TCTAGA	1 cut(s)	1087
XceI	RCATGY	2 cut(s)	1429, 1610
XcmI	CCANNNNNNNNNTGG	1 cut(s)	330
XmnI	GAANNNNTTC	1 cut(s)	1212
XspI	CTAG	5 cut(s)	9, 140, 1008, 1088, 1151
ZrmI	AGTACT	1 cut(s)	82
Zsp2I	ATGCAT	1 cut(s)	1608

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.