Rh2CG510600

Protein GAMETE EXPRESSED

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
68445710 .. 68448446
2737 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG510600.1

Sequence Viewer

Length: 1788 bp
ATGGGCCGATTCAAATCTCTTCTTTTCATGTTGATCTTCCTAACTCTATCAAGGTCTTGTATGTCTGATTGGTGGTTCTTTTCTTCTTCTTCTTCTAGCAAGACTACTGGCCAGAAACCTCCAGAAACTCTGCAAATATCCGGTGATGTTTCGGTTGAATTCTCCATGAAAGCTTTCCACAATGAAAAGGCAATTGAACGAATAGAAGAGGCTGATAAAAGAAAACTGAAATCTTGTTGGGATGATGCTTATAAAGCACTAGTTACATCATGCTCCGAAATTTCCAGTGACAAGAATGATATGAAGAAGAGGTTTTCTTGGGAACTAAGCAACTGCTTTCAGAAGGACATCGGAAGGTCTCCTTTTCCTACGTGCCGTGAAGGCTCTCCCATGAAAGATTGCCTTACAAAATTGGACGACAGTGCTATTCAGACTTACCGGGCATTCTTCCTCGAGACCGAGTCTATTTGCTATCAGTTACAGTCTCATGTATTCAGGGCTGAGACAGAAAAGTTGGTGAATGAATTGGTGAAGTCAGCTGATTATGCAGAGGGCAAATTAGACACCATAGCAGAACAATCAGAGAAATTGTTGGAGGGTTCAAAATATATACACATATCTTTGACTTCAATTGACAAGCAGACACAAGAAATGGCTCAAACTTCCAAGAAAGTTGGTGATCAAATTGGTAATATAGTGAAGCAGTCAGAGGTAATGTTTGAGCAATCTGAGAAGATTGCTGCATCTCAGTTAGAATTGCAAAAAGGGCAAGACAAATTGAAGGAAAATTTGCAAGAGGGCATGGAAGTGATTCATGAGTCTTATCATGCTCTAGGTAAAGAAATACACAGTTTACAGAATGAGACTATTGAAATAGAGAAGAAGGTAACCGAAGTTGGCGACACCGTGTCTACAAAGATGAATAGCCTCCAAAGTAAGGCTGATGATATTAGCAATGTAACAGAGATTTCCTTGGAAAAGCAAAAAGAACTTCTGGAAGGTCAATCCGAAGCTCTTGACGGGCTTCAGTCACTAACTAAATTCCAGGTTCAAGCTCTAGAAGAGAGCAGGGGTATTTTGCAGCAATTGGCTAAATTTGGTCGTGAACAGCAAGAAGAGCTACTTCGGCAACAAGAACAGATTAAACAAGGCCATGACAATCTGGTTAAAAATTCGAAGTCCATACTGGCAGCTCAGGAAGCTTTTGAACAAAAGCAAGAAACCATGTTTGTTGCTTTGGAAAAGCTATTCAAATTGCACAATGCCTTGTTGCTCGAATCGAGATCAATCAAAGCTTTCTTTCTTTATTCCATATCGATGTTTGTCATCTACTTGTCGACCAGCACAAAGCAAACTTACAAAGTGAGACCCATACTTTACATAGGTCTATGCGTTGCATTTTTGATTGAATTAGCAACGCTTAGGTTTTCAAGAAATGGAGTCGAGCAACAGACTTTGATAGTCAATGGTATTAGGCTCCTTTATGTGTTGTTTTCTTTAGTTCTGGTAGTATACGCCGCCTTCACATATAGGGACTATGAAATGCTGAACTACAACATGCTGAAAAATCTAACAGAGGAGTTTCTAAGGTTTCAAAAAAATGCTGCTTTGCCATTGGTTAGCGATGACTCATCAGATGATGATAATGATGACTCGGACTCGATTACATCTGTTGACACTGAAAACCTAATGGACCACTCCTCCTATCATATACATGAGGAGGTTGGAGATAATTCAAATCTTATTTCTTCGAGTACTAGAAGATATAATCTCCGCAGTCGTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

595

Amino Acids

68.03

Weight (kDa)

5.34

Isoelectric Point (pI)

58.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 252
AccI GTMKAC 3 cut(s) 911, 1337, 1512
AciI CCGC 2 cut(s) 1518, 1774
AcoI YGGCCR 1 cut(s) 109
AcsI RAATTY 6 cut(s) 158, 279, 787, 1040, 1094, 1171
AcuI CTGAAG 1 cut(s) 1010
AfaI GTAC 1 cut(s) 1756
AfiI CCNNNNNNNGG 1 cut(s) 937
AhdI GACNNNNNGTC 1 cut(s) 907
AhlI ACTAGT 1 cut(s) 259
AjnI CCWGG 1 cut(s) 1044
AluBI AGCT 9 cut(s) 173, 539, 1013, 1055, 1120, 1193, 1202, 1246, 1295
AluI AGCT 9 cut(s) 173, 539, 1013, 1055, 1120, 1193, 1202, 1246, 1295
Alw26I GTCTC 6 cut(s) 363, 449, 489, 497, 857, 1360
Ama87I CYCGRG 1 cut(s) 452
AoxI GGCC 3 cut(s) 4, 109, 1150
ApeKI GCWGC 4 cut(s) 740, 1081, 1190, 1604
ApoI RAATTY 6 cut(s) 158, 279, 787, 1040, 1094, 1171
Asp700I GAANNNNTTC 2 cut(s) 173, 810
AspS9I GGNCC 2 cut(s) 4, 1693
AsuC2I CCSGG 1 cut(s) 440
AsuHPI GGTGA 4 cut(s) 155, 529, 541, 689
AsuII TTCGAA 1 cut(s) 1175
AvaI CYCGRG 1 cut(s) 452
AvaII GGWCC 1 cut(s) 1693
BalI TGGCCA 1 cut(s) 111
BbvI GCAGC 4 cut(s) 727, 1093, 1202, 1591
BceAI ACGGC 1 cut(s) 360
BciT130I CCWGG 1 cut(s) 1046
BclI TGATCA 1 cut(s) 679
BcnI CCSGG 1 cut(s) 440
BcoDI GTCTC 6 cut(s) 363, 449, 489, 497, 857, 1360
BcuI ACTAGT 1 cut(s) 259
BfaI CTAG 5 cut(s) 96, 260, 833, 1058, 1758
BglI GCCNNNNNGGC 1 cut(s) 381
BisI GCNGC 5 cut(s) 741, 1082, 1191, 1518, 1605
BlsI GCNGC 5 cut(s) 742, 1083, 1192, 1519, 1606
BmcAI AGTACT 1 cut(s) 1756
Bme1390I CCNGG 2 cut(s) 440, 1046
Bme18I GGWCC 1 cut(s) 1693
BmeRI GACNNNNNGTC 1 cut(s) 907
BmeT110I CYCGRG 1 cut(s) 452
BmgT120I GGNCC 2 cut(s) 4, 1693
BmiI GGNNCC 1 cut(s) 1478
BmrFI CCNGG 2 cut(s) 440, 1046
BmsI GCATC 2 cut(s) 235, 752
BpmI CTGGAG 1 cut(s) 105
Bpu10I CCTNAGC 2 cut(s) 1194, 1421
Bpu14I TTCGAA 1 cut(s) 1175
BpuMI CCSGG 1 cut(s) 440
Bsa29I ATCGAT 1 cut(s) 1316
BsaAI YACGTR 1 cut(s) 372
BsaBI GATNNNNATC 1 cut(s) 13
BsaI GGTCTC 3 cut(s) 363, 449, 1360
BsaJI CCNNGG 1 cut(s) 972
BsaWI WCCGGW 1 cut(s) 140
BsaXI ACNNNNNCTCC 2 cut(s) 1685, 1715
Bsc4I CCNNNNNNNGG 1 cut(s) 937
Bse1I ACTGG 3 cut(s) 112, 285, 1191
Bse3DI GCAATG 1 cut(s) 961
Bse8I GATNNNNATC 1 cut(s) 13
BseBI CCWGG 1 cut(s) 1046
BseCI ATCGAT 1 cut(s) 1316
BseDI CCNNGG 1 cut(s) 972
BseGI GGATG 1 cut(s) 247
BseJI GATNNNNATC 1 cut(s) 13
BseLI CCNNNNNNNGG 1 cut(s) 937
BseMI GCAATG 1 cut(s) 961
BseMII CTCAG 4 cut(s) 492, 720, 761, 1208
BseNI ACTGG 3 cut(s) 112, 285, 1191
BseRI GAGGAG 3 cut(s) 1592, 1690, 1733
BseXI GCAGC 4 cut(s) 727, 1093, 1202, 1591
BshFI GGCC 3 cut(s) 6, 111, 1152
BshVI ATCGAT 1 cut(s) 1316
BsiHKCI CYCGRG 1 cut(s) 452
BsiSI CCGG 2 cut(s) 141, 439
BslFI GGGAC 1 cut(s) 1547
BslI CCNNNNNNNGG 1 cut(s) 937
BsmAI GTCTC 6 cut(s) 363, 449, 489, 497, 857, 1360
BsmFI GGGAC 1 cut(s) 1547
BsmI GAATGC 1 cut(s) 443
BsnI GGCC 3 cut(s) 6, 111, 1152
Bso31I GGTCTC 3 cut(s) 363, 449, 1360
BsoBI CYCGRG 1 cut(s) 452
Bsp119I TTCGAA 1 cut(s) 1175
Bsp143I GATC 3 cut(s) 33, 679, 1283
BspACI CCGC 2 cut(s) 1518, 1774
BspANI GGCC 3 cut(s) 6, 111, 1152
BspCNI CTCAG 4 cut(s) 493, 721, 760, 1207
BspDI ATCGAT 1 cut(s) 1316
BspHI TCATGA 1 cut(s) 814
BspLI GGNNCC 1 cut(s) 1478
BspQI GCTCTTC 1 cut(s) 1110
BspT104I TTCGAA 1 cut(s) 1175
BspTNI GGTCTC 3 cut(s) 363, 449, 1360
BsrDI GCAATG 1 cut(s) 961
BsrI ACTGG 3 cut(s) 112, 285, 1191
BssECI CCNNGG 1 cut(s) 972
BssMI GATC 3 cut(s) 33, 679, 1283
BssNAI GTATAC 1 cut(s) 1513
BssT1I CCWWGG 1 cut(s) 972
Bst1107I GTATAC 1 cut(s) 1513
Bst2UI CCWGG 1 cut(s) 1046
Bst4CI ACNGT 4 cut(s) 422, 483, 851, 907
Bst6I CTCTTC 5 cut(s) 24, 201, 302, 1056, 1110
BstBAI YACGTR 1 cut(s) 372
BstBI TTCGAA 1 cut(s) 1175
BstDEI CTNAG 7 cut(s) 326, 501, 729, 747, 1194, 1421, 1586
BstEII GGTNACC 1 cut(s) 886
BstF5I GGATG 1 cut(s) 247
BstKTI GATC 3 cut(s) 36, 682, 1286
BstMAI GTCTC 6 cut(s) 363, 449, 489, 497, 857, 1360
BstMBI GATC 3 cut(s) 33, 679, 1283
BstMWI GCNNNNNNNGC 7 cut(s) 254, 381, 545, 766, 1117, 1126, 1199
BstNI CCWGG 1 cut(s) 1046
BstNSI RCATGY 1 cut(s) 1561
BstPI GGTNACC 1 cut(s) 886
BstSCI CCNGG 2 cut(s) 438, 1044
BstV1I GCAGC 4 cut(s) 727, 1093, 1202, 1591
BstZ17I GTATAC 1 cut(s) 1513
Bsu15I ATCGAT 1 cut(s) 1316
BsuRI GGCC 3 cut(s) 6, 111, 1152
BsuTUI ATCGAT 1 cut(s) 1316
BtgZI GCGATG 1 cut(s) 1638
BtsCI GGATG 1 cut(s) 247
BtsIMutI CAGTG 3 cut(s) 292, 427, 1677
CciI TCATGA 1 cut(s) 814
Cfr13I GGNCC 2 cut(s) 4, 1693
ClaI ATCGAT 1 cut(s) 1316
Csp6I GTAC 1 cut(s) 1755
CviQI GTAC 1 cut(s) 1755
DdeI CTNAG 7 cut(s) 326, 501, 729, 747, 1194, 1421, 1586
DpnI GATC 3 cut(s) 35, 681, 1285
DpnII GATC 3 cut(s) 33, 679, 1283
DriI GACNNNNNGTC 1 cut(s) 907
EaeI YGGCCR 1 cut(s) 109
Eam1104I CTCTTC 5 cut(s) 24, 201, 302, 1056, 1110
Eam1105I GACNNNNNGTC 1 cut(s) 907
EarI CTCTTC 5 cut(s) 24, 201, 302, 1056, 1110
Eco130I CCWWGG 1 cut(s) 972
Eco31I GGTCTC 3 cut(s) 363, 449, 1360
Eco47I GGWCC 1 cut(s) 1693
Eco57I CTGAAG 1 cut(s) 1010
Eco88I CYCGRG 1 cut(s) 452
Eco91I GGTNACC 1 cut(s) 886
EcoO65I GGTNACC 1 cut(s) 886
EcoRI GAATTC 1 cut(s) 158
EcoRII CCWGG 1 cut(s) 1044
EcoT14I CCWWGG 1 cut(s) 972
ErhI CCWWGG 1 cut(s) 972
FalI AAGNNNNNCTT 6 cut(s) 346, 378, 387, 419, 1107, 1139
FaqI GGGAC 1 cut(s) 1547
FbaI TGATCA 1 cut(s) 679
FblI GTMKAC 3 cut(s) 911, 1337, 1512
Fnu4HI GCNGC 5 cut(s) 741, 1082, 1191, 1518, 1605
FokI GGATG 1 cut(s) 254
Fsp4HI GCNGC 5 cut(s) 741, 1082, 1191, 1518, 1605
FspBI CTAG 5 cut(s) 96, 260, 833, 1058, 1758
GluI GCNGC 5 cut(s) 741, 1082, 1191, 1518, 1605
GsuI CTGGAG 1 cut(s) 105
HaeIII GGCC 3 cut(s) 6, 111, 1152
HapII CCGG 2 cut(s) 141, 439
HincII GTYRAC 2 cut(s) 1338, 1675
HindII GTYRAC 2 cut(s) 1338, 1675
HindIII AAGCTT 3 cut(s) 171, 1200, 1293
HinfI GANTC 9 cut(s) 9, 461, 811, 818, 1277, 1440, 1628, 1652, 1658
HpaII CCGG 2 cut(s) 141, 439
HphI GGTGA 4 cut(s) 155, 529, 541, 689
Hpy166II GTNNAC 6 cut(s) 854, 912, 1106, 1338, 1513, 1675
Hpy8I GTNNAC 6 cut(s) 854, 912, 1106, 1338, 1513, 1675
Hpy99I CGWCG 1 cut(s) 1785
HpyAV CCTTC 7 cut(s) 337, 348, 374, 775, 877, 992, 1531
HpyCH4III ACNGT 4 cut(s) 422, 483, 851, 907
HpyCH4IV ACGT 1 cut(s) 371
HpyCH4V TGCA 8 cut(s) 133, 548, 743, 760, 793, 1081, 1258, 1397
HpyF10VI GCNNNNNNNGC 7 cut(s) 254, 381, 545, 766, 1117, 1126, 1199
HpyF3I CTNAG 7 cut(s) 326, 501, 729, 747, 1194, 1421, 1586
HpySE526I ACGT 1 cut(s) 371
Ksp22I TGATCA 1 cut(s) 679
Kzo9I GATC 3 cut(s) 33, 679, 1283
LguI GCTCTTC 1 cut(s) 1110
LmnI GCTCC 2 cut(s) 278, 1482
Lsp1109I GCAGC 4 cut(s) 727, 1093, 1202, 1591
LweI GCATC 2 cut(s) 235, 752
MaeI CTAG 5 cut(s) 96, 260, 833, 1058, 1758
MaeII ACGT 1 cut(s) 371
MaeIII GTNAC 6 cut(s) 262, 287, 477, 886, 958, 1029
MalI GATC 3 cut(s) 35, 681, 1285
MboI GATC 3 cut(s) 33, 679, 1283
MfeI CAATTG 3 cut(s) 192, 630, 1085
MlsI TGGCCA 1 cut(s) 111
MluNI TGGCCA 1 cut(s) 111
MlyI GAGTC 6 cut(s) 470, 827, 1449, 1622, 1646, 1652
MmeI TCCRAC 2 cut(s) 573, 1705
Mox20I TGGCCA 1 cut(s) 111
MroXI GAANNNNTTC 2 cut(s) 173, 810
MscI TGGCCA 1 cut(s) 111
MseI TTAA 3 cut(s) 1143, 1167, 1786
MslI CAYNNNNRTG 3 cut(s) 806, 1316, 1713
Msp20I TGGCCA 1 cut(s) 111
MspA1I CMGCKG 1 cut(s) 539
MspI CCGG 2 cut(s) 141, 439
MspR9I CCNGG 2 cut(s) 440, 1046
MunI CAATTG 3 cut(s) 192, 630, 1085
Mva1269I GAATGC 1 cut(s) 443
MvaI CCWGG 1 cut(s) 1046
MwoI GCNNNNNNNGC 7 cut(s) 254, 381, 545, 766, 1117, 1126, 1199
NciI CCSGG 1 cut(s) 440
NdeII GATC 3 cut(s) 33, 679, 1283
NlaIV GGNNCC 1 cut(s) 1478
NmuCI GTSAC 2 cut(s) 287, 1029
NspI RCATGY 1 cut(s) 1561
NspV TTCGAA 1 cut(s) 1175
PaeR7I CTCGAG 1 cut(s) 452
PagI TCATGA 1 cut(s) 814
PciSI GCTCTTC 1 cut(s) 1110
PctI GAATGC 1 cut(s) 443
PdmI GAANNNNTTC 2 cut(s) 173, 810
PfeI GAWTC 3 cut(s) 9, 811, 1277
PflFI GACNNNGTC 1 cut(s) 460
PkrI GCNGC 5 cut(s) 742, 1083, 1192, 1519, 1606
PleI GAGTC 6 cut(s) 469, 826, 1448, 1622, 1646, 1652
PpsI GAGTC 6 cut(s) 469, 826, 1448, 1622, 1646, 1652
Ppu21I YACGTR 1 cut(s) 372
PsiI TTATAA 1 cut(s) 252
Psp6I CCWGG 1 cut(s) 1044
PspEI GGTNACC 1 cut(s) 886
PspGI CCWGG 1 cut(s) 1044
PspN4I GGNNCC 1 cut(s) 1478
PspPI GGNCC 2 cut(s) 4, 1693
PsyI GACNNNGTC 1 cut(s) 460
PvuII CAGCTG 1 cut(s) 539
RsaI GTAC 1 cut(s) 1756
RsaNI GTAC 1 cut(s) 1755
RseI CAYNNNNRTG 3 cut(s) 806, 1316, 1713
SalI GTCGAC 1 cut(s) 1336
SapI GCTCTTC 1 cut(s) 1110
SaqAI TTAA 3 cut(s) 1143, 1167, 1786
SatI GCNGC 5 cut(s) 741, 1082, 1191, 1518, 1605
Sau3AI GATC 3 cut(s) 33, 679, 1283
Sau96I GGNCC 2 cut(s) 4, 1693
ScaI AGTACT 1 cut(s) 1756
SchI GAGTC 6 cut(s) 470, 827, 1449, 1622, 1646, 1652
ScrFI CCNGG 2 cut(s) 440, 1046
SfaNI GCATC 2 cut(s) 235, 752
Sfr274I CTCGAG 1 cut(s) 452
SfuI TTCGAA 1 cut(s) 1175
SinI GGWCC 1 cut(s) 1693
SlaI CTCGAG 1 cut(s) 452
SmiMI CAYNNNNRTG 3 cut(s) 806, 1316, 1713
SmlI CTYRAG 1 cut(s) 452
SmoI CTYRAG 1 cut(s) 452
SpeI ACTAGT 1 cut(s) 259
SsiI CCGC 2 cut(s) 1518, 1774
SspMI CTAG 5 cut(s) 96, 260, 833, 1058, 1758
StyD4I CCNGG 2 cut(s) 438, 1044
StyI CCWWGG 1 cut(s) 972
TaaI ACNGT 4 cut(s) 422, 483, 851, 907
TaiI ACGT 1 cut(s) 374
TaqI TCGA 9 cut(s) 453, 1175, 1275, 1280, 1316, 1337, 1443, 1661, 1751
TaqII GACCGA 1 cut(s) 473
TatI WGTACW 1 cut(s) 1754
TauI GCSGC 1 cut(s) 1520
TfiI GAWTC 3 cut(s) 9, 811, 1277
Tru1I TTAA 3 cut(s) 1143, 1167, 1786
Tru9I TTAA 3 cut(s) 1143, 1167, 1786
TscAI CASTG 3 cut(s) 292, 427, 1684
TseFI GTSAC 2 cut(s) 287, 1029
TseI GCWGC 4 cut(s) 740, 1081, 1190, 1604
Tsp45I GTSAC 2 cut(s) 287, 1029
TspDTI ATGAA 9 cut(s) 16, 182, 198, 317, 407, 537, 803, 935, 1554
TspRI CASTG 3 cut(s) 292, 427, 1684
Tth111I GACNNNGTC 1 cut(s) 460
VpaK11BI GGWCC 1 cut(s) 1693
XapI RAATTY 6 cut(s) 158, 279, 787, 1040, 1094, 1171
XbaI TCTAGA 1 cut(s) 1057
XceI RCATGY 1 cut(s) 1561
XhoI CTCGAG 1 cut(s) 452
XmiI GTMKAC 3 cut(s) 911, 1337, 1512
XmnI GAANNNNTTC 2 cut(s) 173, 810
XspI CTAG 5 cut(s) 96, 260, 833, 1058, 1758
ZrmI AGTACT 1 cut(s) 1756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.