Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0003007

Physical Location & Seq

Genomic Coordinates Reverse (-)

25260589 .. 25262220

Gene Structure 1632 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1118400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1374 bp

ATGAGGCGGCCCCAGCAAGCCCCTCAGCGGCTCTACGTCCCTCCGTCGTCGCGCGACGGAAACAGCCACGACAACTACGAAGACACCGACCTCGACAACATCGATTACGACGACAACGATGGTTCCAAGGACCCCGGGAGTGACGACAACAACCACGGCAACGCTGGCAGCGGTGATGAAGAAGTCGATCCTCTGGATGCTTTCATGGAGGGGATTCATGCGGAGGTGAGGTCAGCTCCGCCGCCGAAGCTGAAAGTGAAGGCCGAGAAGTACAGGGACGATGAGGAGGAGGATCATATGGAGAGGTTTCTGAGGGCTAAAAGGGACGTGGTGCTCACGCTGGCATCAGATGCTTTACACACCAGATATGACTCCGATGAAGAGGTATATGCGACCGCCAAGGCCGTCGATGCCGGGTTGTTGGAGTACGATTCAGATGATAATCCCATTGTTCTGGACAAGAGGAAGATCGAGCCGATTTCAGCTCTCGATCATAGTTCAATCGACTACGAGCCGTTTAATAAGGATTTTTACGAGGAGAAAGACTTGGCCATCCGTACGTCGGGGTTTGATGTACCGAGGCCAGTTAAGACATTTGAAGATTGTGGATTTTCTTCACAACTCATGGCTGCCATAAAAAAACAAGACTACCAAAAGCCGACACCAACACAATGCGTAGCTCTACCCATAGTTCTTTCCCGGAGAGATATAATTGGTATTGCGAAAACTGGTTCTGGAAAGACTGCCACTCTTGTCCTTCCAATGATTGTCCACATTATGGATCAGCCAGAGCTTCAAAAAGAAGAAGGTCCAATTGGAGTGATATGCGCTCCTACTAGAGAGCTGCGCGCACCAAATATACTTAAGAGTCCAAAAAAATTGCAAAATCACATGGGATACGTATCTCTGCTGTATATGGTGGAATGTCTTAAGCTTGATCAGTTCAAAGAACTTAAGGCAGGATGTGAAATAGTTTTTGCTACTCCTGGGAGATTGATCGACATGCTTAAAATGAAGGCACTGACAATGCTTAGGGCAACTTACCTAGTACTTGATGAGGCTGATCAGATGTTTGACCTTGGGTTTGAGCCTCAAATTAGATCTATTGTTGGTCAGATTCGGCCAGACCGACAGACATTGCTCTTTTCTGCGACAATGCTCCGTAAAGTTGAAAAATTGGCTAGGGAGATTCTCTCAGATCCTATAAGAGTTACAGTGGGTGAGGTGGGAATGGCCAATGAGGATATCACTCAGGTTGTTCATGTAATTCCTTCTGATGATGAGAAGCTGCCCTGGCTTTTTGAGAAGTTACCAGGAATGATTGATGAGGGTGATGTTTTAGTATTTGCTTCAAAAAAAAGCTGCAGTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

458

Amino Acids

51.26

Weight (kDa)

4.84

Isoelectric Point (pI)

45.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	221 - 392	1e-35	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47330
fragaria_vesca	FvH4_1g27100 FvH4_1g27100 FvH4_1g27100
malus_domestica	MD00G1118300.v1.1 MD00G1118400.v1.1 MD09G1283400.v1.1 MD17G1274100.v1.1 MD17G1274800.v1.1 MD17G1275300.v1.1 MD17G1276500.v1.1
prunus_persica	Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1
pyrus_communis	pycom09g19130 pycom09g19140 pycom17g27210 pycom17g27330
rosa_chinensis	RchiOBHm_Chr3g0487421
rosa_laevigata	RLG00000023004
rosa_multiflora	Rmu_sc0008232.1_g000009 Rmu_sc0022533.1_g000001 Rmu_sc0031316.1_g000001
rosa_roxburghii	Rroxscaffold_6G00394790
rosa_rugosa	Rorug03G0234000
rosa_samantha	Rh2AG395100 Rh2CG381700 Rh3AG282000 Rh3BG317600 Rh3CG315700 Rh3DG313600 Rh4CG235900 Rh7AG337700 Rh7AG476200 Rh7CG355800
rosa_wichuraiana	Rw3G024970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	778
AccII	CGCG	3 cut(s)	52, 54, 849
AciI	CCGC	7 cut(s)	7, 28, 171, 221, 239, 242, 396
AclWI	GGATC	4 cut(s)	182, 300, 789, 1193
AcoI	YGGCCR	3 cut(s)	549, 1121, 1233
AfaI	GTAC	5 cut(s)	272, 428, 559, 576, 1050
AfiI	CCNNNNNNNGG	3 cut(s)	27, 562, 778
AflII	CTTAAG	3 cut(s)	863, 929, 953
AgsI	TTSAA	6 cut(s)	501, 599, 797, 946, 1172, 1353
AjiI	CACGTC	1 cut(s)	328
AjnI	CCWGG	3 cut(s)	985, 1292, 1312
AjuI	GAANNNNNNNTTGG	2 cut(s)	798, 830
AluBI	AGCT	9 cut(s)	236, 250, 485, 680, 793, 844, 934, 1288, 1362
AluI	AGCT	9 cut(s)	236, 250, 485, 680, 793, 844, 934, 1288, 1362
Alw21I	GWGCWC	1 cut(s)	336
AlwI	GGATC	4 cut(s)	182, 300, 789, 1193
Ama87I	CYCGRG	1 cut(s)	134
AoxI	GGCC	7 cut(s)	8, 261, 402, 549, 581, 1121, 1233
ApeKI	GCWGC	5 cut(s)	168, 629, 844, 1288, 1362
ArsI	GACNNNNNNTTYG	2 cut(s)	1067, 1099
AspLEI	GCGC	4 cut(s)	54, 830, 849, 851
AspS9I	GGNCC	3 cut(s)	9, 130, 809
AsuC2I	CCSGG	4 cut(s)	135, 136, 415, 700
AsuHPI	GGTGA	4 cut(s)	185, 238, 1232, 1343
AvaI	CYCGRG	1 cut(s)	134
AvaII	GGWCC	2 cut(s)	130, 809
BalI	TGGCCA	2 cut(s)	551, 1235
BbsI	GAAGAC	1 cut(s)	87
Bbv12I	GWGCWC	1 cut(s)	336
BbvCI	CCTCAGC	1 cut(s)	24
BbvI	GCAGC	5 cut(s)	180, 616, 831, 1275, 1349
BccI	CCATC	2 cut(s)	113, 560
BceAI	ACGGC	3 cut(s)	172, 389, 499
BciT130I	CCWGG	3 cut(s)	987, 1294, 1314
BciVI	GTATCC	1 cut(s)	890
BclI	TGATCA	2 cut(s)	937, 1063
BcnI	CCSGG	4 cut(s)	135, 136, 415, 700
BfaI	CTAG	3 cut(s)	837, 1046, 1182
BfmI	CTRYAG	1 cut(s)	1363
BfrI	CTTAAG	3 cut(s)	863, 929, 953
BfuI	GTATCC	1 cut(s)	890
BglII	AGATCT	1 cut(s)	1100
BisI	GCNGC	8 cut(s)	8, 29, 169, 242, 630, 845, 1289, 1363
BlsI	GCNGC	8 cut(s)	9, 30, 170, 243, 631, 846, 1290, 1364
BmcAI	AGTACT	1 cut(s)	1050
Bme1390I	CCNGG	7 cut(s)	135, 136, 415, 700, 987, 1294, 1314
Bme18I	GGWCC	2 cut(s)	130, 809
BmeT110I	CYCGRG	1 cut(s)	134
BmgBI	CACGTC	1 cut(s)	328
BmgT120I	GGNCC	3 cut(s)	9, 130, 809
BmiI	GGNNCC	3 cut(s)	11, 124, 132
BmrFI	CCNGG	7 cut(s)	135, 136, 415, 700, 987, 1294, 1314
BmsI	GCATC	4 cut(s)	187, 340, 353, 400
BpiI	GAAGAC	1 cut(s)	87
BplI	GAGNNNNNCTC	4 cut(s)	220, 252, 1178, 1210
Bpu10I	CCTNAGC	2 cut(s)	24, 1031
BpuMI	CCSGG	4 cut(s)	135, 136, 415, 700
Bsa29I	ATCGAT	1 cut(s)	102
BsaAI	YACGTR	1 cut(s)	901
BsaBI	GATNNNNATC	2 cut(s)	441, 901
BsaJI	CCNNGG	9 cut(s)	126, 133, 134, 154, 399, 578, 986, 1078, 1292
BsaXI	ACNNNNNCTCC	2 cut(s)	215, 245
Bsc4I	CCNNNNNNNGG	3 cut(s)	27, 562, 778
Bse1I	ACTGG	2 cut(s)	584, 733
Bse3DI	GCAATG	1 cut(s)	1136
Bse8I	GATNNNNATC	2 cut(s)	441, 901
BseBI	CCWGG	3 cut(s)	987, 1294, 1314
BseCI	ATCGAT	1 cut(s)	102
BseDI	CCNNGG	9 cut(s)	126, 133, 134, 154, 399, 578, 986, 1078, 1292
BseGI	GGATG	3 cut(s)	202, 552, 968
BseJI	GATNNNNATC	2 cut(s)	441, 901
BseLI	CCNNNNNNNGG	3 cut(s)	27, 562, 778
BseMI	GCAATG	1 cut(s)	1136
BseMII	CTCAG	4 cut(s)	38, 302, 1209, 1265
BseNI	ACTGG	2 cut(s)	584, 733
BsePI	GCGCGC	1 cut(s)	847
BseRI	GAGGAG	3 cut(s)	299, 302, 551
BseXI	GCAGC	5 cut(s)	180, 616, 831, 1275, 1349
BseYI	CCCAGC	1 cut(s)	12
Bsh1236I	CGCG	3 cut(s)	52, 54, 849
Bsh1285I	CGRYCG	1 cut(s)	396
BshFI	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1123, 1235
BshVI	ATCGAT	1 cut(s)	102
BsiEI	CGRYCG	1 cut(s)	396
BsiHKAI	GWGCWC	1 cut(s)	336
BsiHKCI	CYCGRG	1 cut(s)	134
BsiSI	CCGG	3 cut(s)	135, 414, 700
BsiWI	CGTACG	1 cut(s)	557
BslFI	GGGAC	3 cut(s)	23, 290, 338
BslI	CCNNNNNNNGG	3 cut(s)	27, 562, 778
BsmFI	GGGAC	3 cut(s)	23, 290, 338
BsnI	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1123, 1235
BsoBI	CYCGRG	1 cut(s)	134
Bsp1286I	GDGCHC	1 cut(s)	336
BspACI	CCGC	7 cut(s)	7, 28, 171, 221, 239, 242, 396
BspANI	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1123, 1235
BspCNI	CTCAG	4 cut(s)	37, 303, 1208, 1264
BspDI	ATCGAT	1 cut(s)	102
BspFNI	CGCG	3 cut(s)	52, 54, 849
BspLI	GGNNCC	3 cut(s)	11, 124, 132
BspMAI	CTGCAG	1 cut(s)	1367
BspPI	GGATC	4 cut(s)	182, 300, 789, 1193
BspTI	CTTAAG	3 cut(s)	863, 929, 953
BsrDI	GCAATG	1 cut(s)	1136
BsrI	ACTGG	2 cut(s)	584, 733
BssECI	CCNNGG	9 cut(s)	126, 133, 134, 154, 399, 578, 986, 1078, 1292
BssHII	GCGCGC	1 cut(s)	847
BssT1I	CCWWGG	3 cut(s)	126, 399, 1078
Bst2UI	CCWGG	3 cut(s)	987, 1294, 1314
Bst4CI	ACNGT	1 cut(s)	1216
Bst6I	CTCTTC	1 cut(s)	375
BstAFI	CTTAAG	3 cut(s)	863, 929, 953
BstAPI	GCANNNNNTGC	1 cut(s)	350
BstBAI	YACGTR	1 cut(s)	901
BstC8I	GCNNGC	4 cut(s)	18, 166, 342, 849
BstDEI	CTNAG	5 cut(s)	24, 311, 1031, 1195, 1251
BstDSI	CCRYGG	1 cut(s)	154
BstF5I	GGATG	3 cut(s)	202, 552, 968
BstFNI	CGCG	3 cut(s)	52, 54, 849
BstHHI	GCGC	4 cut(s)	54, 830, 849, 851
BstMCI	CGRYCG	1 cut(s)	396
BstMWI	GCNNNNNNNGC	6 cut(s)	13, 165, 247, 350, 410, 1294
BstNI	CCWGG	3 cut(s)	987, 1294, 1314
BstNSI	RCATGY	1 cut(s)	1006
BstSCI	CCNGG	7 cut(s)	133, 134, 413, 698, 985, 1292, 1312
BstSFI	CTRYAG	1 cut(s)	1363
BstSNI	TACGTA	1 cut(s)	901
BstUI	CGCG	3 cut(s)	52, 54, 849
BstV1I	GCAGC	5 cut(s)	180, 616, 831, 1275, 1349
BstV2I	GAAGAC	1 cut(s)	87
BstX2I	RGATCY	2 cut(s)	1100, 1198
BstXI	CCANNNNNNTGG	1 cut(s)	454
BstYI	RGATCY	2 cut(s)	1100, 1198
Bsu15I	ATCGAT	1 cut(s)	102
BsuI	GTATCC	1 cut(s)	890
BsuRI	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1123, 1235
BsuTUI	ATCGAT	1 cut(s)	102
BtgI	CCRYGG	1 cut(s)	154
BtrI	CACGTC	1 cut(s)	328
BtsCI	GGATG	3 cut(s)	202, 552, 968
BtsI	GCAGTG	1 cut(s)	1372
BtsIMutI	CAGTG	3 cut(s)	1019, 1221, 1372
Cac8I	GCNNGC	4 cut(s)	18, 166, 342, 849
CfoI	GCGC	4 cut(s)	54, 830, 849, 851
Cfr13I	GGNCC	3 cut(s)	9, 130, 809
Cfr9I	CCCGGG	1 cut(s)	134
ClaI	ATCGAT	1 cut(s)	102
Csp6I	GTAC	5 cut(s)	271, 427, 558, 575, 1049
CviAII	CATG	6 cut(s)	205, 218, 625, 892, 1003, 1262
CviQI	GTAC	5 cut(s)	271, 427, 558, 575, 1049
DdeI	CTNAG	5 cut(s)	24, 311, 1031, 1195, 1251
EaeI	YGGCCR	3 cut(s)	549, 1121, 1233
Eam1104I	CTCTTC	1 cut(s)	375
EarI	CTCTTC	1 cut(s)	375
EciI	GGCGGA	1 cut(s)	228
Eco105I	TACGTA	1 cut(s)	901
Eco130I	CCWWGG	3 cut(s)	126, 399, 1078
Eco32I	GATATC	1 cut(s)	1246
Eco47I	GGWCC	2 cut(s)	130, 809
Eco88I	CYCGRG	1 cut(s)	134
EcoO109I	RGGNCCY	1 cut(s)	130
EcoRII	CCWGG	3 cut(s)	985, 1292, 1312
EcoRV	GATATC	1 cut(s)	1246
EcoT14I	CCWWGG	3 cut(s)	126, 399, 1078
ErhI	CCWWGG	3 cut(s)	126, 399, 1078
FaeI	CATG	6 cut(s)	208, 221, 628, 895, 1006, 1265
FaqI	GGGAC	3 cut(s)	23, 290, 338
FatI	CATG	6 cut(s)	204, 217, 624, 891, 1002, 1261
FauNDI	CATATG	1 cut(s)	297
FbaI	TGATCA	2 cut(s)	937, 1063
Fnu4HI	GCNGC	8 cut(s)	8, 29, 169, 242, 630, 845, 1289, 1363
FokI	GGATG	3 cut(s)	209, 539, 975
Fsp4HI	GCNGC	8 cut(s)	8, 29, 169, 242, 630, 845, 1289, 1363
FspBI	CTAG	3 cut(s)	837, 1046, 1182
GlaI	GCGC	4 cut(s)	53, 829, 848, 850
GluI	GCNGC	8 cut(s)	8, 29, 169, 242, 630, 845, 1289, 1363
GsaI	CCCAGC	1 cut(s)	16
HaeIII	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1123, 1235
HapII	CCGG	3 cut(s)	135, 414, 700
HhaI	GCGC	4 cut(s)	54, 830, 849, 851
Hin1II	CATG	6 cut(s)	208, 221, 628, 895, 1006, 1265
Hin6I	GCGC	4 cut(s)	52, 828, 847, 849
HinP1I	GCGC	4 cut(s)	52, 828, 847, 849
HindIII	AAGCTT	1 cut(s)	932
HinfI	GANTC	6 cut(s)	214, 371, 431, 868, 1117, 1189
HpaII	CCGG	3 cut(s)	135, 414, 700
HphI	GGTGA	4 cut(s)	185, 238, 1232, 1343
Hpy166II	GTNNAC	1 cut(s)	772
Hpy188I	TCNGA	8 cut(s)	312, 349, 376, 436, 1068, 1116, 1198, 1276
Hpy188III	TCNNGA	4 cut(s)	194, 455, 488, 735
Hpy8I	GTNNAC	1 cut(s)	772
Hpy99I	CGWCG	6 cut(s)	49, 52, 59, 113, 410, 565
HpyAV	CCTTC	5 cut(s)	253, 767, 800, 1009, 1281
HpyCH4III	ACNGT	1 cut(s)	1216
HpyCH4IV	ACGT	4 cut(s)	36, 327, 560, 900
HpyCH4V	TGCA	2 cut(s)	883, 1365
HpyF10VI	GCNNNNNNNGC	6 cut(s)	13, 165, 247, 350, 410, 1294
HpyF3I	CTNAG	5 cut(s)	24, 311, 1031, 1195, 1251
HpySE526I	ACGT	4 cut(s)	36, 327, 560, 900
Hsp92II	CATG	6 cut(s)	208, 221, 628, 895, 1006, 1265
HspAI	GCGC	4 cut(s)	52, 828, 847, 849
Ksp22I	TGATCA	2 cut(s)	937, 1063
LmnI	GCTCC	3 cut(s)	241, 835, 1164
Lsp1109I	GCAGC	5 cut(s)	180, 616, 831, 1275, 1349
LweI	GCATC	4 cut(s)	187, 340, 353, 400
MaeI	CTAG	3 cut(s)	837, 1046, 1182
MaeII	ACGT	4 cut(s)	36, 327, 560, 900
MaeIII	GTNAC	3 cut(s)	140, 1210, 1308
MboII	GAAGA	7 cut(s)	92, 191, 392, 478, 606, 611, 815
MfeI	CAATTG	1 cut(s)	813
MflI	RGATCY	2 cut(s)	1100, 1198
MhlI	GDGCHC	1 cut(s)	336
MlsI	TGGCCA	2 cut(s)	551, 1235
MluCI	AATT	6 cut(s)	711, 813, 878, 1095, 1175, 1266
MluNI	TGGCCA	2 cut(s)	551, 1235
MlyI	GAGTC	2 cut(s)	365, 877
MmeI	TCCRAC	1 cut(s)	402
Mox20I	TGGCCA	2 cut(s)	551, 1235
MscI	TGGCCA	2 cut(s)	551, 1235
MseI	TTAA	6 cut(s)	519, 588, 864, 930, 954, 1008
Msp20I	TGGCCA	2 cut(s)	551, 1235
MspA1I	CMGCKG	2 cut(s)	28, 171
MspCI	CTTAAG	3 cut(s)	863, 929, 953
MspI	CCGG	3 cut(s)	135, 414, 700
MspR9I	CCNGG	7 cut(s)	135, 136, 415, 700, 987, 1294, 1314
MunI	CAATTG	1 cut(s)	813
MvaI	CCWGG	3 cut(s)	987, 1294, 1314
MvnI	CGCG	3 cut(s)	52, 54, 849
MwoI	GCNNNNNNNGC	6 cut(s)	13, 165, 247, 350, 410, 1294
NciI	CCSGG	4 cut(s)	135, 136, 415, 700
NdeI	CATATG	1 cut(s)	297
NlaIII	CATG	6 cut(s)	208, 221, 628, 895, 1006, 1265
NlaIV	GGNNCC	3 cut(s)	11, 124, 132
NmeAIII	GCCGAG	1 cut(s)	289
NmuCI	GTSAC	1 cut(s)	140
NspI	RCATGY	1 cut(s)	1006
PauI	GCGCGC	1 cut(s)	847
PcsI	WCGNNNNNNNCGW	6 cut(s)	75, 84, 99, 108, 114, 1126
PfeI	GAWTC	4 cut(s)	214, 431, 1117, 1189
Pfl23II	CGTACG	1 cut(s)	557
PflMI	CCANNNNNTGG	1 cut(s)	778
PfoI	TCCNGGA	1 cut(s)	698
PkrI	GCNGC	8 cut(s)	9, 30, 170, 243, 631, 846, 1290, 1364
PleI	GAGTC	2 cut(s)	365, 876
PpsI	GAGTC	2 cut(s)	365, 876
Ppu21I	YACGTR	1 cut(s)	901
PpuMI	RGGWCCY	1 cut(s)	130
Psp5II	RGGWCCY	1 cut(s)	130
Psp6I	CCWGG	3 cut(s)	985, 1292, 1312
PspFI	CCCAGC	1 cut(s)	12
PspGI	CCWGG	3 cut(s)	985, 1292, 1312
PspLI	CGTACG	1 cut(s)	557
PspN4I	GGNNCC	3 cut(s)	11, 124, 132
PspPI	GGNCC	3 cut(s)	9, 130, 809
PspPPI	RGGWCCY	1 cut(s)	130
PstI	CTGCAG	1 cut(s)	1367
PsuI	RGATCY	2 cut(s)	1100, 1198
PteI	GCGCGC	1 cut(s)	847
RsaI	GTAC	5 cut(s)	272, 428, 559, 576, 1050
RsaNI	GTAC	5 cut(s)	271, 427, 558, 575, 1049
SaqAI	TTAA	6 cut(s)	519, 588, 864, 930, 954, 1008
SatI	GCNGC	8 cut(s)	8, 29, 169, 242, 630, 845, 1289, 1363
Sau96I	GGNCC	3 cut(s)	9, 130, 809
ScaI	AGTACT	1 cut(s)	1050
SchI	GAGTC	2 cut(s)	365, 877
ScrFI	CCNGG	7 cut(s)	135, 136, 415, 700, 987, 1294, 1314
SduI	GDGCHC	1 cut(s)	336
SfaNI	GCATC	4 cut(s)	187, 340, 353, 400
SfcI	CTRYAG	1 cut(s)	1363
SinI	GGWCC	2 cut(s)	130, 809
SmaI	CCCGGG	1 cut(s)	136
SmlI	CTYRAG	3 cut(s)	863, 929, 953
SmoI	CTYRAG	3 cut(s)	863, 929, 953
SnaBI	TACGTA	1 cut(s)	901
Sse9I	AATT	6 cut(s)	711, 813, 878, 1095, 1175, 1266
SsiI	CCGC	7 cut(s)	7, 28, 171, 221, 239, 242, 396
SspMI	CTAG	3 cut(s)	837, 1046, 1182
StyD4I	CCNGG	7 cut(s)	133, 134, 413, 698, 985, 1292, 1312
StyI	CCWWGG	3 cut(s)	126, 399, 1078
TaaI	ACNGT	1 cut(s)	1216
TaiI	ACGT	4 cut(s)	39, 330, 563, 903
TaqI	TCGA	8 cut(s)	93, 102, 186, 408, 471, 489, 504, 999
TaqII	GACCGA	1 cut(s)	1143
TasI	AATT	6 cut(s)	711, 813, 878, 1095, 1175, 1266
TatI	WGTACW	2 cut(s)	270, 1048
TauI	GCSGC	3 cut(s)	10, 31, 244
TfiI	GAWTC	4 cut(s)	214, 431, 1117, 1189
Tru1I	TTAA	6 cut(s)	519, 588, 864, 930, 954, 1008
Tru9I	TTAA	6 cut(s)	519, 588, 864, 930, 954, 1008
TscAI	CASTG	3 cut(s)	1026, 1221, 1372
TseFI	GTSAC	1 cut(s)	140
TseI	GCWGC	5 cut(s)	168, 629, 844, 1288, 1362
Tsp45I	GTSAC	1 cut(s)	140
TspDTI	ATGAA	6 cut(s)	192, 193, 206, 393, 1028, 1250
TspGWI	ACGGA	4 cut(s)	33, 72, 545, 1151
TspMI	CCCGGG	1 cut(s)	134
TspRI	CASTG	3 cut(s)	1026, 1221, 1372
Van91I	CCANNNNNTGG	1 cut(s)	778
Vha464I	CTTAAG	3 cut(s)	863, 929, 953
VpaK11BI	GGWCC	2 cut(s)	130, 809
XceI	RCATGY	1 cut(s)	1006
XcmI	CCANNNNNNNNNTGG	1 cut(s)	161
XmaI	CCCGGG	1 cut(s)	134
XspI	CTAG	3 cut(s)	837, 1046, 1182
ZrmI	AGTACT	1 cut(s)	1050

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.