Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0003007

Physical Location & Seq

Genomic Coordinates Forward (+)

33627642 .. 33631317

Gene Structure 3676 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1274800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1911 bp

ATGAGGCGGCCCCAGCAAGCCCCTCAGCGGCTCTACGTCCCTCCGTCGTCGCGCGACGGAAACAGCCACGACAACTACGAAGACACCGACCTCGACAACATCGATTACGACGACAACGATGGTTCCAAGGACCCCGGGAGTGACGACAACAACCACGGCAACGCTGGCAGCGGTGATGAAGAAGTCGATCCTCTGGATGCTTTCATGGAGGGGATTCATGCGGAGGTGAGGTCAGCTCCGCCGCCGAAGCTGAAAGTGAAGGCCGAGAAGTACAGGGACGATGAGGAGGAGGATCATATGGAGAGGTTTCTGAGGGCTAAAAGGGACGTGGTGCTCACGCTGGCATCAGATGCTTTACACACCAGATATGACTCCGATGAAGAGGTATATGCGACCGCCAAGGCCGTCGATGCCGGGTTGTTGGAGTACGATTCAGATGATAATCCCATTGTTCTGGACAAGAGGAAGATCGAGCCGATTTCAGCTCTCGATCATAGTTCAATCGACTACGAGCCGTTTAATAAGGATTTTTACGAGGAGAAAGACTTGGCCATCCGTACGTCGGGGTTTGATGTACCGAGGCCAGTTAAGACATTTGAAGATTGTGGATTTTCTTCACAACTCATGGCTGCCATAAAAAAACAAGACTACCAAAAGCCGACACCAACACAATGCGTAGCTCTACCCATAGTTCTTTCCCGGAGAGATATAATTGGTATTGCGAAAACTGGTTCTGGAAAGACTGCCACTCTTGTCCTTCCAATGATTGTCCACATTATGGATCAGCCAGAGCTTCAAAAAGAAGAAGGTCCAATTGGAGTGATATGCGCTCCTACTAGAGAGCTGGCGCACCAAATATACTTAAGATTCAAAGAACTTAAGGCAGGATGTGAAATAGTTTTTGCTACTCCTGGGAGATTGATCGACATGCTTAAAATGAAGGCACTGACAATGCTTAGGGCAACTTACCTAGTACTTGATGAGGCTGATCAGATGTTTGACCTTGGGTTTGAGCCTCAAATTAGATCTATTGTTGGTCAGATTCGGCCAGACCGACAGACATTGCTCTTTTCTGCGACAATGCTCCGTAAAGTTGAAAAATTGGCTAGGGAGATTCTCTCAGATCCTATAAGAGTTACAGTGGGTGAGGTGGGAATGGCCAATGAGGATATCACTCAGGTTGTTCATGTAATTCCTTCTGATGATGAGAAGCTGCCCTGGCTTTTTGAGAAGTTACCAGGAATGATTGATGAGGGTGATGTTTTAGTATTTGCTTCAAAAAAAGCTGCAGTGGATGAGATCGAGTCACAGCTTGCTCAGAAAGGTCGGGCTGGTGATAAGGATGGCACTGCGTACACTCTTATTACACAGAAAGAGGCACGTTTTGCTGGTGAGTTGGTTAATAGCTTGGTTGCTGCTGGTCAGATTGTCTCCACGGAGCTCATGGACCTTGCGATGAAGTTATTTTGGGTGCACCTTGTCTGTGGAAAGAAAGGTAGAGGGAGGGGCGGCGGTGGTCGAGGTGTGCGTGGGGTGGATTTTGGTCTGGGTATTGGATATAATACGGAGTCCAATAGTTCTTCATCGAATACTGTTCCTAGTCGATCTGTTGCAGTAACTCCTCAGAGGACAGGAATGATGTCTCAGTTCAAGACTAAATTTGTTGCCGCTTCATCTAACTCTCCAAGTCAAGGTTCAGCTAACAGCTCTAGTGTGCCCAACAGACAGGCATTACGAGGATTTGTATCCGGTGGTTCAATAGGTGGTGATGTATATAGAACTCAGGCAACCAGTACAATTACTCCTGCTCCTGCTCCAACATCAATGGTAAATAAAACTGCTACTCCGAACACTGGACAAAATTCAAGTCAGAAACCCTCCGAAAGGTTAATTAAACTGATGCTTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

637

Amino Acids

69.65

Weight (kDa)

5.25

Isoelectric Point (pI)

39.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	221 - 367	4.5e-32	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003007)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47330
fragaria_vesca	FvH4_1g27100 FvH4_1g27100 FvH4_1g27100
malus_domestica	MD00G1118300.v1.1 MD00G1118400.v1.1 MD09G1283400.v1.1 MD17G1274100.v1.1 MD17G1274800.v1.1 MD17G1275300.v1.1 MD17G1276500.v1.1
prunus_persica	Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1
pyrus_communis	pycom09g19130 pycom09g19140 pycom17g27210 pycom17g27330
rosa_chinensis	RchiOBHm_Chr3g0487421
rosa_laevigata	RLG00000023004
rosa_multiflora	Rmu_sc0008232.1_g000009 Rmu_sc0022533.1_g000001 Rmu_sc0031316.1_g000001
rosa_roxburghii	Rroxscaffold_6G00394790
rosa_rugosa	Rorug03G0234000
rosa_samantha	Rh2AG395100 Rh2CG381700 Rh3AG282000 Rh3BG317600 Rh3CG315700 Rh3DG313600 Rh4CG235900 Rh7AG337700 Rh7AG476200 Rh7CG355800
rosa_wichuraiana	Rw3G024970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	778
AccII	CGCG	2 cut(s)	52, 54
AclWI	GGATC	4 cut(s)	182, 300, 789, 1118
AcoI	YGGCCR	3 cut(s)	549, 1046, 1158
AcsI	RAATTY	2 cut(s)	1658, 1861
AfaI	GTAC	7 cut(s)	272, 428, 559, 576, 975, 1355, 1795
AfiI	CCNNNNNNNGG	6 cut(s)	27, 562, 778, 1691, 1853, 1884
AflII	CTTAAG	2 cut(s)	862, 878
AgsI	TTSAA	9 cut(s)	501, 599, 797, 871, 1097, 1278, 1651, 1758, 1866
AjiI	CACGTC	1 cut(s)	328
AjnI	CCWGG	3 cut(s)	910, 1217, 1237
AjuI	GAANNNNNNNTTGG	4 cut(s)	798, 830, 1678, 1710
Alw21I	GWGCWC	3 cut(s)	336, 1443, 1476
Alw26I	GTCTC	2 cut(s)	1435, 1647
Alw44I	GTGCAC	1 cut(s)	1472
AlwI	GGATC	4 cut(s)	182, 300, 789, 1118
Ama87I	CYCGRG	1 cut(s)	134
AoxI	GGCC	7 cut(s)	8, 261, 402, 549, 581, 1046, 1158
ApaLI	GTGCAC	1 cut(s)	1472
ApeKI	GCWGC	5 cut(s)	168, 629, 1213, 1286, 1415
ApoI	RAATTY	2 cut(s)	1658, 1861
ArsI	GACNNNNNNTTYG	4 cut(s)	992, 1024, 1852, 1884
AspLEI	GCGC	3 cut(s)	54, 830, 850
AspS9I	GGNCC	4 cut(s)	9, 130, 809, 1447
AsuC2I	CCSGG	4 cut(s)	135, 136, 415, 700
AsuHPI	GGTGA	7 cut(s)	185, 238, 1157, 1268, 1346, 1403, 1778
AvaI	CYCGRG	1 cut(s)	134
AvaII	GGWCC	3 cut(s)	130, 809, 1447
BaeGI	GKGCMC	2 cut(s)	1476, 1719
BalI	TGGCCA	2 cut(s)	551, 1160
BanII	GRGCYC	1 cut(s)	1443
BbsI	GAAGAC	1 cut(s)	87
Bbv12I	GWGCWC	3 cut(s)	336, 1443, 1476
BbvCI	CCTCAGC	1 cut(s)	24
BbvI	GCAGC	5 cut(s)	180, 616, 1200, 1273, 1402
BccI	CCATC	3 cut(s)	113, 560, 1337
BceAI	ACGGC	3 cut(s)	172, 389, 499
BciT130I	CCWGG	3 cut(s)	912, 1219, 1239
BciVI	GTATCC	1 cut(s)	1756
BclI	TGATCA	1 cut(s)	988
BcnI	CCSGG	4 cut(s)	135, 136, 415, 700
BcoDI	GTCTC	2 cut(s)	1435, 1647
BfaI	CTAG	5 cut(s)	837, 971, 1107, 1599, 1710
BfmI	CTRYAG	1 cut(s)	1287
BfrI	CTTAAG	2 cut(s)	862, 878
BfuI	GTATCC	1 cut(s)	1756
BglII	AGATCT	1 cut(s)	1025
BmcAI	AGTACT	1 cut(s)	975
Bme1390I	CCNGG	7 cut(s)	135, 136, 415, 700, 912, 1219, 1239
Bme18I	GGWCC	3 cut(s)	130, 809, 1447
BmeT110I	CYCGRG	1 cut(s)	134
BmgBI	CACGTC	1 cut(s)	328
BmgT120I	GGNCC	4 cut(s)	9, 130, 809, 1447
BmiI	GGNNCC	3 cut(s)	11, 124, 132
BmrFI	CCNGG	7 cut(s)	135, 136, 415, 700, 912, 1219, 1239
BmsI	GCATC	5 cut(s)	187, 340, 353, 400, 1890
BpiI	GAAGAC	1 cut(s)	87
BplI	GAGNNNNNCTC	4 cut(s)	220, 252, 1103, 1135
Bpu10I	CCTNAGC	2 cut(s)	24, 956
BpuMI	CCSGG	4 cut(s)	135, 136, 415, 700
Bsa29I	ATCGAT	1 cut(s)	102
BsaBI	GATNNNNATC	2 cut(s)	441, 1744
BsaWI	WCCGGW	1 cut(s)	1748
BsaXI	ACNNNNNCTCC	8 cut(s)	215, 245, 1786, 1792, 1816, 1822, 1828, 1858
Bsc4I	CCNNNNNNNGG	6 cut(s)	27, 562, 778, 1691, 1853, 1884
Bse1I	ACTGG	4 cut(s)	584, 733, 1791, 1858
Bse3DI	GCAATG	1 cut(s)	1061
Bse8I	GATNNNNATC	2 cut(s)	441, 1744
BseBI	CCWGG	3 cut(s)	912, 1219, 1239
BseCI	ATCGAT	1 cut(s)	102
BseGI	GGATG	5 cut(s)	202, 552, 893, 1300, 1348
BseJI	GATNNNNATC	2 cut(s)	441, 1744
BseLI	CCNNNNNNNGG	6 cut(s)	27, 562, 778, 1691, 1853, 1884
BseMI	GCAATG	1 cut(s)	1061
BseMII	CTCAG	8 cut(s)	38, 302, 1134, 1190, 1331, 1637, 1658, 1796
BseNI	ACTGG	4 cut(s)	584, 733, 1791, 1858
BseRI	GAGGAG	4 cut(s)	299, 302, 551, 1611
BseSI	GKGCMC	2 cut(s)	1476, 1719
BseXI	GCAGC	5 cut(s)	180, 616, 1200, 1273, 1402
BseYI	CCCAGC	1 cut(s)	12
Bsh1236I	CGCG	2 cut(s)	52, 54
Bsh1285I	CGRYCG	1 cut(s)	396
BshFI	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1048, 1160
BshVI	ATCGAT	1 cut(s)	102
BsiEI	CGRYCG	1 cut(s)	396
BsiHKAI	GWGCWC	3 cut(s)	336, 1443, 1476
BsiHKCI	CYCGRG	1 cut(s)	134
BsiSI	CCGG	4 cut(s)	135, 414, 700, 1749
BsiWI	CGTACG	1 cut(s)	557
BslFI	GGGAC	3 cut(s)	23, 290, 338
BslI	CCNNNNNNNGG	6 cut(s)	27, 562, 778, 1691, 1853, 1884
BsmAI	GTCTC	2 cut(s)	1435, 1647
BsmFI	GGGAC	3 cut(s)	23, 290, 338
BsnI	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1048, 1160
BsoBI	CYCGRG	1 cut(s)	134
Bsp1286I	GDGCHC	4 cut(s)	336, 1443, 1476, 1719
BspANI	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1048, 1160
BspCNI	CTCAG	8 cut(s)	37, 303, 1133, 1189, 1330, 1636, 1657, 1795
BspDI	ATCGAT	1 cut(s)	102
BspFNI	CGCG	2 cut(s)	52, 54
BspLI	GGNNCC	3 cut(s)	11, 124, 132
BspMAI	CTGCAG	1 cut(s)	1291
BspPI	GGATC	4 cut(s)	182, 300, 789, 1118
BspTI	CTTAAG	2 cut(s)	862, 878
BsrDI	GCAATG	1 cut(s)	1061
BsrI	ACTGG	4 cut(s)	584, 733, 1791, 1858
BssT1I	CCWWGG	3 cut(s)	126, 399, 1003
Bst2UI	CCWGG	3 cut(s)	912, 1219, 1239
Bst4CI	ACNGT	2 cut(s)	1141, 1594
Bst6I	CTCTTC	1 cut(s)	375
BstAFI	CTTAAG	2 cut(s)	862, 878
BstAPI	GCANNNNNTGC	2 cut(s)	350, 1385
BstC8I	GCNNGC	5 cut(s)	18, 166, 342, 846, 1314
BstDEI	CTNAG	9 cut(s)	24, 311, 956, 1120, 1176, 1317, 1623, 1644, 1782
BstDSI	CCRYGG	2 cut(s)	154, 1434
BstENI	CCTNNNNNAGG	1 cut(s)	1882
BstF5I	GGATG	5 cut(s)	202, 552, 893, 1300, 1348
BstFNI	CGCG	2 cut(s)	52, 54
BstHHI	GCGC	3 cut(s)	54, 830, 850
BstMAI	GTCTC	2 cut(s)	1435, 1647
BstMCI	CGRYCG	1 cut(s)	396
BstMWI	GCNNNNNNNGC	7 cut(s)	13, 165, 247, 350, 410, 1219, 1385
BstNI	CCWGG	3 cut(s)	912, 1219, 1239
BstNSI	RCATGY	1 cut(s)	931
BstSCI	CCNGG	7 cut(s)	133, 134, 413, 698, 910, 1217, 1237
BstSFI	CTRYAG	1 cut(s)	1287
BstSLI	GKGCMC	2 cut(s)	1476, 1719
BstUI	CGCG	2 cut(s)	52, 54
BstV1I	GCAGC	5 cut(s)	180, 616, 1200, 1273, 1402
BstV2I	GAAGAC	1 cut(s)	87
BstX2I	RGATCY	2 cut(s)	1025, 1123
BstXI	CCANNNNNNTGG	1 cut(s)	454
BstYI	RGATCY	2 cut(s)	1025, 1123
Bsu15I	ATCGAT	1 cut(s)	102
BsuI	GTATCC	1 cut(s)	1756
BsuRI	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1048, 1160
BsuTUI	ATCGAT	1 cut(s)	102
BtgI	CCRYGG	2 cut(s)	154, 1434
BtgZI	GCGATG	1 cut(s)	1469
BtrI	CACGTC	1 cut(s)	328
BtsCI	GGATG	5 cut(s)	202, 552, 893, 1300, 1348
BtsI	GCAGTG	2 cut(s)	1296, 1347
BtsIMutI	CAGTG	5 cut(s)	944, 1146, 1296, 1347, 1851
Cac8I	GCNNGC	5 cut(s)	18, 166, 342, 846, 1314
CfoI	GCGC	3 cut(s)	54, 830, 850
Cfr13I	GGNCC	4 cut(s)	9, 130, 809, 1447
Cfr9I	CCCGGG	1 cut(s)	134
ClaI	ATCGAT	1 cut(s)	102
Csp6I	GTAC	7 cut(s)	271, 427, 558, 575, 974, 1354, 1794
CviAII	CATG	6 cut(s)	205, 218, 625, 928, 1187, 1444
CviQI	GTAC	7 cut(s)	271, 427, 558, 575, 974, 1354, 1794
DdeI	CTNAG	9 cut(s)	24, 311, 956, 1120, 1176, 1317, 1623, 1644, 1782
EaeI	YGGCCR	3 cut(s)	549, 1046, 1158
Eam1104I	CTCTTC	1 cut(s)	375
EarI	CTCTTC	1 cut(s)	375
EciI	GGCGGA	1 cut(s)	228
Ecl136II	GAGCTC	1 cut(s)	1441
Eco130I	CCWWGG	3 cut(s)	126, 399, 1003
Eco24I	GRGCYC	1 cut(s)	1443
Eco32I	GATATC	1 cut(s)	1171
Eco47I	GGWCC	3 cut(s)	130, 809, 1447
Eco53kI	GAGCTC	1 cut(s)	1441
Eco88I	CYCGRG	1 cut(s)	134
EcoICRI	GAGCTC	1 cut(s)	1441
EcoNI	CCTNNNNNAGG	1 cut(s)	1882
EcoO109I	RGGNCCY	1 cut(s)	130
EcoRII	CCWGG	3 cut(s)	910, 1217, 1237
EcoRV	GATATC	1 cut(s)	1171
EcoT14I	CCWWGG	3 cut(s)	126, 399, 1003
EcoT38I	GRGCYC	1 cut(s)	1443
ErhI	CCWWGG	3 cut(s)	126, 399, 1003
FaeI	CATG	6 cut(s)	208, 221, 628, 931, 1190, 1447
FaqI	GGGAC	3 cut(s)	23, 290, 338
FatI	CATG	6 cut(s)	204, 217, 624, 927, 1186, 1443
FauNDI	CATATG	1 cut(s)	297
FbaI	TGATCA	1 cut(s)	988
FokI	GGATG	5 cut(s)	209, 539, 900, 1307, 1355
FriOI	GRGCYC	1 cut(s)	1443
FspBI	CTAG	5 cut(s)	837, 971, 1107, 1599, 1710
GlaI	GCGC	3 cut(s)	53, 829, 849
GsaI	CCCAGC	1 cut(s)	16
HaeIII	GGCC	7 cut(s)	10, 263, 404, 551, 583, 1048, 1160
HapII	CCGG	4 cut(s)	135, 414, 700, 1749
HhaI	GCGC	3 cut(s)	54, 830, 850
Hin1II	CATG	6 cut(s)	208, 221, 628, 931, 1190, 1447
Hin6I	GCGC	3 cut(s)	52, 828, 848
HinP1I	GCGC	3 cut(s)	52, 828, 848
HinfI	GANTC	8 cut(s)	214, 371, 431, 867, 1042, 1114, 1304, 1568
HpaII	CCGG	4 cut(s)	135, 414, 700, 1749
HphI	GGTGA	7 cut(s)	185, 238, 1157, 1268, 1346, 1403, 1778
Hpy166II	GTNNAC	3 cut(s)	772, 1356, 1474
Hpy188III	TCNNGA	5 cut(s)	194, 455, 488, 735, 1651
Hpy8I	GTNNAC	3 cut(s)	772, 1356, 1474
Hpy99I	CGWCG	6 cut(s)	49, 52, 59, 113, 410, 565
HpyAV	CCTTC	5 cut(s)	253, 767, 800, 934, 1206
HpyCH4III	ACNGT	2 cut(s)	1141, 1594
HpyCH4IV	ACGT	4 cut(s)	36, 327, 560, 1381
HpyCH4V	TGCA	3 cut(s)	1289, 1474, 1613
HpyF10VI	GCNNNNNNNGC	7 cut(s)	13, 165, 247, 350, 410, 1219, 1385
HpyF3I	CTNAG	9 cut(s)	24, 311, 956, 1120, 1176, 1317, 1623, 1644, 1782
HpySE526I	ACGT	4 cut(s)	36, 327, 560, 1381
Hsp92II	CATG	6 cut(s)	208, 221, 628, 931, 1190, 1447
HspAI	GCGC	3 cut(s)	52, 828, 848
Ksp22I	TGATCA	1 cut(s)	988
LmnI	GCTCC	6 cut(s)	241, 835, 1089, 1438, 1813, 1819
Lsp1109I	GCAGC	5 cut(s)	180, 616, 1200, 1273, 1402
LweI	GCATC	5 cut(s)	187, 340, 353, 400, 1890
MaeI	CTAG	5 cut(s)	837, 971, 1107, 1599, 1710
MaeII	ACGT	4 cut(s)	36, 327, 560, 1381
MaeIII	GTNAC	5 cut(s)	140, 1135, 1233, 1305, 1615
MboII	GAAGA	8 cut(s)	92, 191, 392, 478, 606, 611, 815, 1572
MfeI	CAATTG	1 cut(s)	813
MflI	RGATCY	2 cut(s)	1025, 1123
MhlI	GDGCHC	4 cut(s)	336, 1443, 1476, 1719
MlsI	TGGCCA	2 cut(s)	551, 1160
MluCI	AATT	9 cut(s)	711, 813, 1020, 1100, 1191, 1658, 1797, 1861, 1890
MluNI	TGGCCA	2 cut(s)	551, 1160
MlyI	GAGTC	3 cut(s)	365, 1313, 1577
MmeI	TCCRAC	2 cut(s)	402, 1841
Mox20I	TGGCCA	2 cut(s)	551, 1160
MscI	TGGCCA	2 cut(s)	551, 1160
MseI	TTAA	8 cut(s)	519, 588, 863, 879, 933, 1401, 1889, 1893
Msp20I	TGGCCA	2 cut(s)	551, 1160
MspA1I	CMGCKG	2 cut(s)	28, 171
MspCI	CTTAAG	2 cut(s)	862, 878
MspI	CCGG	4 cut(s)	135, 414, 700, 1749
MspR9I	CCNGG	7 cut(s)	135, 136, 415, 700, 912, 1219, 1239
MunI	CAATTG	1 cut(s)	813
MvaI	CCWGG	3 cut(s)	912, 1219, 1239
MvnI	CGCG	2 cut(s)	52, 54
MwoI	GCNNNNNNNGC	7 cut(s)	13, 165, 247, 350, 410, 1219, 1385
NciI	CCSGG	4 cut(s)	135, 136, 415, 700
NdeI	CATATG	1 cut(s)	297
NlaIII	CATG	6 cut(s)	208, 221, 628, 931, 1190, 1447
NlaIV	GGNNCC	3 cut(s)	11, 124, 132
NmeAIII	GCCGAG	1 cut(s)	289
NmuCI	GTSAC	2 cut(s)	140, 1305
NspI	RCATGY	1 cut(s)	931
PacI	TTAATTAA	1 cut(s)	1893
PcsI	WCGNNNNNNNCGW	7 cut(s)	75, 84, 99, 108, 114, 1051, 1525
PfeI	GAWTC	5 cut(s)	214, 431, 867, 1042, 1114
Pfl23II	CGTACG	1 cut(s)	557
PflMI	CCANNNNNTGG	1 cut(s)	778
PfoI	TCCNGGA	1 cut(s)	698
PleI	GAGTC	3 cut(s)	365, 1312, 1576
PpsI	GAGTC	3 cut(s)	365, 1312, 1576
PpuMI	RGGWCCY	1 cut(s)	130
Psp124BI	GAGCTC	1 cut(s)	1443
Psp5II	RGGWCCY	1 cut(s)	130
Psp6I	CCWGG	3 cut(s)	910, 1217, 1237
PspFI	CCCAGC	1 cut(s)	12
PspGI	CCWGG	3 cut(s)	910, 1217, 1237
PspLI	CGTACG	1 cut(s)	557
PspN4I	GGNNCC	3 cut(s)	11, 124, 132
PspPI	GGNCC	4 cut(s)	9, 130, 809, 1447
PspPPI	RGGWCCY	1 cut(s)	130
PstI	CTGCAG	1 cut(s)	1291
PsuI	RGATCY	2 cut(s)	1025, 1123
RsaI	GTAC	7 cut(s)	272, 428, 559, 576, 975, 1355, 1795
RsaNI	GTAC	7 cut(s)	271, 427, 558, 575, 974, 1354, 1794
SacI	GAGCTC	1 cut(s)	1443
SaqAI	TTAA	8 cut(s)	519, 588, 863, 879, 933, 1401, 1889, 1893
Sau96I	GGNCC	4 cut(s)	9, 130, 809, 1447
ScaI	AGTACT	1 cut(s)	975
SchI	GAGTC	3 cut(s)	365, 1313, 1577
ScrFI	CCNGG	7 cut(s)	135, 136, 415, 700, 912, 1219, 1239
SduI	GDGCHC	4 cut(s)	336, 1443, 1476, 1719
SfaNI	GCATC	5 cut(s)	187, 340, 353, 400, 1890
SfcI	CTRYAG	1 cut(s)	1287
SinI	GGWCC	3 cut(s)	130, 809, 1447
SmaI	CCCGGG	1 cut(s)	136
SmlI	CTYRAG	2 cut(s)	862, 878
SmoI	CTYRAG	2 cut(s)	862, 878
Sse9I	AATT	9 cut(s)	711, 813, 1020, 1100, 1191, 1658, 1797, 1861, 1890
SspMI	CTAG	5 cut(s)	837, 971, 1107, 1599, 1710
SstI	GAGCTC	1 cut(s)	1443
StyD4I	CCNGG	7 cut(s)	133, 134, 413, 698, 910, 1217, 1237
StyI	CCWWGG	3 cut(s)	126, 399, 1003
TaaI	ACNGT	2 cut(s)	1141, 1594
TaiI	ACGT	4 cut(s)	39, 330, 563, 1384
TaqII	GACCGA	1 cut(s)	1068
TasI	AATT	9 cut(s)	711, 813, 1020, 1100, 1191, 1658, 1797, 1861, 1890
TatI	WGTACW	3 cut(s)	270, 973, 1793
TauI	GCSGC	5 cut(s)	10, 31, 244, 1512, 1670
TfiI	GAWTC	5 cut(s)	214, 431, 867, 1042, 1114
Tru1I	TTAA	8 cut(s)	519, 588, 863, 879, 933, 1401, 1889, 1893
Tru9I	TTAA	8 cut(s)	519, 588, 863, 879, 933, 1401, 1889, 1893
TscAI	CASTG	5 cut(s)	951, 1146, 1296, 1354, 1858
TseFI	GTSAC	2 cut(s)	140, 1305
TseI	GCWGC	5 cut(s)	168, 629, 1213, 1286, 1415
Tsp45I	GTSAC	2 cut(s)	140, 1305
TspDTI	ATGAA	9 cut(s)	192, 193, 206, 393, 953, 1175, 1472, 1572, 1662
TspGWI	ACGGA	6 cut(s)	33, 72, 545, 1076, 1451, 1580
TspMI	CCCGGG	1 cut(s)	134
TspRI	CASTG	5 cut(s)	951, 1146, 1296, 1354, 1858
Van91I	CCANNNNNTGG	1 cut(s)	778
Vha464I	CTTAAG	2 cut(s)	862, 878
VneI	GTGCAC	1 cut(s)	1472
VpaK11BI	GGWCC	3 cut(s)	130, 809, 1447
XagI	CCTNNNNNAGG	1 cut(s)	1882
XapI	RAATTY	2 cut(s)	1658, 1861
XceI	RCATGY	1 cut(s)	931
XcmI	CCANNNNNNNNNTGG	2 cut(s)	161, 1441
XmaI	CCCGGG	1 cut(s)	134
XspI	CTAG	5 cut(s)	837, 971, 1107, 1599, 1710
ZrmI	AGTACT	1 cut(s)	975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.