Belongs to the DEAD box helicase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47330 |
| fragaria_vesca | FvH4_1g27100 FvH4_1g27100 FvH4_1g27100 |
| malus_domestica | MD00G1118300.v1.1 MD00G1118400.v1.1 MD09G1283400.v1.1 MD17G1274100.v1.1 MD17G1274800.v1.1 MD17G1275300.v1.1 MD17G1276500.v1.1 |
| prunus_persica | Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 Prupe.3G010900_v2.0.a1 |
| pyrus_communis | pycom09g19130 pycom09g19140 pycom17g27210 pycom17g27330 |
| rosa_chinensis | RchiOBHm_Chr3g0487421 |
| rosa_laevigata | RLG00000023004 |
| rosa_multiflora | Rmu_sc0008232.1_g000009 Rmu_sc0022533.1_g000001 Rmu_sc0031316.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00394790 |
| rosa_rugosa | Rorug03G0234000 |
| rosa_samantha | Rh2AG395100 Rh2CG381700 Rh3AG282000 Rh3BG317600 Rh3CG315700 Rh3DG313600 Rh4CG235900 Rh7AG337700 Rh7AG476200 Rh7CG355800 |
| rosa_wichuraiana | Rw3G024970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 126, 129, 507, 510 |
| AclWI | GGATC | 1 cut(s) | 601 |
| AcsI | RAATTY | 2 cut(s) | 275, 475 |
| AdeI | CACNNNGTG | 1 cut(s) | 565 |
| AfaI | GTAC | 1 cut(s) | 412 |
| AgsI | TTSAA | 5 cut(s) | 90, 268, 308, 375, 545 |
| AjnI | CCWGG | 1 cut(s) | 646 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 295, 327 |
| Alw26I | GTCTC | 1 cut(s) | 264 |
| AlwI | GGATC | 1 cut(s) | 601 |
| ApeKI | GCWGC | 3 cut(s) | 227, 284, 455 |
| ApoI | RAATTY | 2 cut(s) | 275, 475 |
| AspLEI | GCGC | 1 cut(s) | 515 |
| AsuHPI | GGTGA | 2 cut(s) | 291, 395 |
| BaeGI | GKGCMC | 1 cut(s) | 336 |
| BbvI | GCAGC | 3 cut(s) | 214, 271, 442 |
| BccI | CCATC | 1 cut(s) | 56 |
| BciT130I | CCWGG | 1 cut(s) | 648 |
| BciVI | GTATCC | 1 cut(s) | 373 |
| BcoDI | GTCTC | 1 cut(s) | 264 |
| BfaI | CTAG | 3 cut(s) | 216, 327, 497 |
| BfmI | CTRYAG | 1 cut(s) | 228 |
| BfoI | RGCGCY | 1 cut(s) | 516 |
| BfuI | GTATCC | 1 cut(s) | 373 |
| BglII | AGATCT | 1 cut(s) | 14 |
| BisI | GCNGC | 6 cut(s) | 127, 228, 285, 456, 508, 511 |
| BlsI | GCNGC | 6 cut(s) | 128, 229, 286, 457, 509, 512 |
| Bme1390I | CCNGG | 1 cut(s) | 648 |
| BmrFI | CCNGG | 1 cut(s) | 648 |
| BpmI | CTGGAG | 1 cut(s) | 489 |
| BsaBI | GATNNNNATC | 1 cut(s) | 361 |
| BsaJI | CCNNGG | 2 cut(s) | 646, 647 |
| BsaWI | WCCGGW | 2 cut(s) | 365, 517 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 403, 409, 433, 439 |
| Bse118I | RCCGGY | 1 cut(s) | 343 |
| Bse1I | ACTGG | 3 cut(s) | 408, 472, 539 |
| Bse8I | GATNNNNATC | 1 cut(s) | 361 |
| BseBI | CCWGG | 1 cut(s) | 648 |
| BseDI | CCNNGG | 2 cut(s) | 646, 647 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseJI | GATNNNNATC | 1 cut(s) | 361 |
| BseMII | CTCAG | 4 cut(s) | 254, 275, 413, 473 |
| BseNI | ACTGG | 3 cut(s) | 408, 472, 539 |
| BseRI | GAGGAG | 2 cut(s) | 228, 417 |
| BseSI | GKGCMC | 1 cut(s) | 336 |
| BseXI | GCAGC | 3 cut(s) | 214, 271, 442 |
| BsiSI | CCGG | 3 cut(s) | 344, 366, 518 |
| BslFI | GGGAC | 2 cut(s) | 538, 629 |
| BsmAI | GTCTC | 1 cut(s) | 264 |
| BsmFI | GGGAC | 2 cut(s) | 538, 629 |
| Bsp1286I | GDGCHC | 1 cut(s) | 336 |
| Bsp143I | GATC | 4 cut(s) | 14, 221, 593, 624 |
| BspACI | CCGC | 4 cut(s) | 126, 129, 507, 510 |
| BspCNI | CTCAG | 4 cut(s) | 253, 274, 412, 472 |
| BspMAI | CTGCAG | 1 cut(s) | 232 |
| BspPI | GGATC | 1 cut(s) | 601 |
| BsrFI | RCCGGY | 1 cut(s) | 343 |
| BsrI | ACTGG | 3 cut(s) | 408, 472, 539 |
| BssAI | RCCGGY | 1 cut(s) | 343 |
| BssECI | CCNNGG | 2 cut(s) | 646, 647 |
| BssMI | GATC | 4 cut(s) | 14, 221, 593, 624 |
| Bst2UI | CCWGG | 1 cut(s) | 648 |
| Bst4CI | ACNGT | 2 cut(s) | 529, 536 |
| BstDEI | CTNAG | 4 cut(s) | 240, 261, 399, 459 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstH2I | RGCGCY | 1 cut(s) | 516 |
| BstHHI | GCGC | 1 cut(s) | 515 |
| BstKTI | GATC | 4 cut(s) | 17, 224, 596, 627 |
| BstMAI | GTCTC | 1 cut(s) | 264 |
| BstMBI | GATC | 4 cut(s) | 14, 221, 593, 624 |
| BstNI | CCWGG | 1 cut(s) | 648 |
| BstSCI | CCNGG | 1 cut(s) | 646 |
| BstSFI | CTRYAG | 1 cut(s) | 228 |
| BstSLI | GKGCMC | 1 cut(s) | 336 |
| BstV1I | GCAGC | 3 cut(s) | 214, 271, 442 |
| BstX2I | RGATCY | 1 cut(s) | 14 |
| BstYI | RGATCY | 1 cut(s) | 14 |
| BsuI | GTATCC | 1 cut(s) | 373 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| BtsIMutI | CAGTG | 2 cut(s) | 444, 465 |
| CfoI | GCGC | 1 cut(s) | 515 |
| Cfr10I | RCCGGY | 1 cut(s) | 343 |
| Csp6I | GTAC | 1 cut(s) | 411 |
| CviJI | RGCY | 1 cut(s) | 407 |
| CviKI_1 | RGCY | 1 cut(s) | 407 |
| CviQI | GTAC | 1 cut(s) | 411 |
| DdeI | CTNAG | 4 cut(s) | 240, 261, 399, 459 |
| DpnI | GATC | 4 cut(s) | 16, 223, 595, 626 |
| DpnII | GATC | 4 cut(s) | 14, 221, 593, 624 |
| DraIII | CACNNNGTG | 1 cut(s) | 565 |
| EcoRII | CCWGG | 1 cut(s) | 646 |
| FaiI | YATR | 4 cut(s) | 177, 391, 393, 608 |
| FaqI | GGGAC | 2 cut(s) | 538, 629 |
| Fnu4HI | GCNGC | 6 cut(s) | 127, 228, 285, 456, 508, 511 |
| FokI | GGATG | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 6 cut(s) | 127, 228, 285, 456, 508, 511 |
| FspBI | CTAG | 3 cut(s) | 216, 327, 497 |
| GlaI | GCGC | 1 cut(s) | 514 |
| GluI | GCNGC | 6 cut(s) | 127, 228, 285, 456, 508, 511 |
| GsuI | CTGGAG | 1 cut(s) | 489 |
| HaeII | RGCGCY | 1 cut(s) | 516 |
| HapII | CCGG | 3 cut(s) | 344, 366, 518 |
| HhaI | GCGC | 1 cut(s) | 515 |
| Hin6I | GCGC | 1 cut(s) | 513 |
| HinP1I | GCGC | 1 cut(s) | 513 |
| HincII | GTYRAC | 1 cut(s) | 532 |
| HindII | GTYRAC | 1 cut(s) | 532 |
| HinfI | GANTC | 5 cut(s) | 69, 86, 185, 205, 311 |
| HpaI | GTTAAC | 1 cut(s) | 532 |
| HpaII | CCGG | 3 cut(s) | 344, 366, 518 |
| HphI | GGTGA | 2 cut(s) | 291, 395 |
| Hpy166II | GTNNAC | 1 cut(s) | 532 |
| Hpy188I | TCNGA | 4 cut(s) | 14, 243, 402, 462 |
| Hpy188III | TCNNGA | 4 cut(s) | 59, 90, 268, 602 |
| Hpy8I | GTNNAC | 1 cut(s) | 532 |
| HpyCH4III | ACNGT | 2 cut(s) | 529, 536 |
| HpyCH4IV | ACGT | 1 cut(s) | 82 |
| HpyCH4V | TGCA | 1 cut(s) | 230 |
| HpyF3I | CTNAG | 4 cut(s) | 240, 261, 399, 459 |
| HpySE526I | ACGT | 1 cut(s) | 82 |
| HspAI | GCGC | 1 cut(s) | 513 |
| KspAI | GTTAAC | 1 cut(s) | 532 |
| Kzo9I | GATC | 4 cut(s) | 14, 221, 593, 624 |
| LmnI | GCTCC | 2 cut(s) | 430, 520 |
| Lsp1109I | GCAGC | 3 cut(s) | 214, 271, 442 |
| MaeI | CTAG | 3 cut(s) | 216, 327, 497 |
| MaeII | ACGT | 1 cut(s) | 82 |
| MaeIII | GTNAC | 3 cut(s) | 232, 317, 631 |
| MalI | GATC | 4 cut(s) | 16, 223, 595, 626 |
| MboI | GATC | 4 cut(s) | 14, 221, 593, 624 |
| MboII | GAAGA | 2 cut(s) | 189, 320 |
| MfeI | CAATTG | 1 cut(s) | 303 |
| MflI | RGATCY | 1 cut(s) | 14 |
| MhlI | GDGCHC | 1 cut(s) | 336 |
| MluCI | AATT | 4 cut(s) | 275, 303, 414, 475 |
| MlyI | GAGTC | 1 cut(s) | 194 |
| MnlI | CCTC | 7 cut(s) | 92, 110, 114, 237, 249, 347, 438 |
| MseI | TTAA | 4 cut(s) | 33, 531, 656, 661 |
| MspI | CCGG | 3 cut(s) | 344, 366, 518 |
| MspR9I | CCNGG | 1 cut(s) | 648 |
| MunI | CAATTG | 1 cut(s) | 303 |
| MvaI | CCWGG | 1 cut(s) | 648 |
| NdeII | GATC | 4 cut(s) | 14, 221, 593, 624 |
| NmuCI | GTSAC | 1 cut(s) | 631 |
| PasI | CCCWGGG | 1 cut(s) | 647 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 142 |
| PfeI | GAWTC | 4 cut(s) | 69, 86, 205, 311 |
| PkrI | GCNGC | 6 cut(s) | 128, 229, 286, 457, 509, 512 |
| PleI | GAGTC | 1 cut(s) | 193 |
| PpsI | GAGTC | 1 cut(s) | 193 |
| Psp6I | CCWGG | 1 cut(s) | 646 |
| PspGI | CCWGG | 1 cut(s) | 646 |
| PstI | CTGCAG | 1 cut(s) | 232 |
| PsuI | RGATCY | 1 cut(s) | 14 |
| RsaI | GTAC | 1 cut(s) | 412 |
| RsaNI | GTAC | 1 cut(s) | 411 |
| SaqAI | TTAA | 4 cut(s) | 33, 531, 656, 661 |
| SatI | GCNGC | 6 cut(s) | 127, 228, 285, 456, 508, 511 |
| Sau3AI | GATC | 4 cut(s) | 14, 221, 593, 624 |
| SchI | GAGTC | 1 cut(s) | 194 |
| ScrFI | CCNGG | 1 cut(s) | 648 |
| SduI | GDGCHC | 1 cut(s) | 336 |
| SetI | ASST | 8 cut(s) | 48, 77, 85, 103, 115, 319, 382, 498 |
| SfcI | CTRYAG | 1 cut(s) | 228 |
| Sse9I | AATT | 4 cut(s) | 275, 303, 414, 475 |
| SsiI | CCGC | 4 cut(s) | 126, 129, 507, 510 |
| SspMI | CTAG | 3 cut(s) | 216, 327, 497 |
| StyD4I | CCNGG | 1 cut(s) | 646 |
| TaaI | ACNGT | 2 cut(s) | 529, 536 |
| TaiI | ACGT | 1 cut(s) | 85 |
| TaqI | TCGA | 3 cut(s) | 136, 203, 220 |
| TasI | AATT | 4 cut(s) | 275, 303, 414, 475 |
| TatI | WGTACW | 1 cut(s) | 410 |
| TauI | GCSGC | 3 cut(s) | 129, 510, 513 |
| TfiI | GAWTC | 4 cut(s) | 69, 86, 205, 311 |
| Tru1I | TTAA | 4 cut(s) | 33, 531, 656, 661 |
| Tru9I | TTAA | 4 cut(s) | 33, 531, 656, 661 |
| TscAI | CASTG | 2 cut(s) | 444, 472 |
| TseFI | GTSAC | 1 cut(s) | 631 |
| TseI | GCWGC | 3 cut(s) | 227, 284, 455 |
| Tsp45I | GTSAC | 1 cut(s) | 631 |
| TspDTI | ATGAA | 2 cut(s) | 189, 279 |
| TspGWI | ACGGA | 1 cut(s) | 197 |
| TspRI | CASTG | 2 cut(s) | 444, 472 |
| XapI | RAATTY | 2 cut(s) | 275, 475 |
| XspI | CTAG | 3 cut(s) | 216, 327, 497 |