MD00G1141700.v1.1

Aldo-keto reductase family 4 member

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0002704
Physical Location & Seq
Reverse (-)
30873377 .. 30876638
3262 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1141700.v1.1.491

Sequence Viewer

Length: 948 bp
ATGGCGGAAGCAATTCGGTTCTTTGAGCTCAACACCGGGGCCAAGATTCCGTCAGTCGGACTGGGCACGTGGCAGGCCGAGCCTGGCGTCGTCGCTGCCGCCGTCACCGCCGCCGTCAAGGTTGGATATCGGCATATTGATTGTGCTCAAGCTTATGGAAATGAAAAGGAGATTGGGTTTGCTCTGAAGAAGCTTTATGCTGATGGTGTAGTGAAGCGCGAGGACTTATGGATCACTTCAAAACTCTGGTGTAGCAATCATGCACCAGAAGATGTGCGGAAGGCAATAGATAGTACCCTGCAAGACTTACAACTCGACTATCTCGATCTGTATCTTATCCACTGGCCGGTCAAGATGAAGAAAGGTTCCGCTGGCTTTAAGCCTGAAAACCTTGACCAACCTGACATACCCAGTACTTGGAAAGCACTGGAGGCAGCATATGACTCTGGAAAGGCCAGGGCTATTGGAGTTAGCAATTTTTCTACCAAAAAGCTCGGCGACCTGTTGGCTGTGGCGCGCATCCCTCCCGCTGTTAATCAAGTGGAATGCCACCCTCAGTGGCAGCAGCCAAAGCTACATGAATTCTGTAAATCCAAGGGAGTCCACTTAAGTGGGTATTCACCATTGGGATCCCCTGGCACAAGTAGCATTAAGGGTGATGTCCTTAAGAATCCAATTCTATTATCGGTGGCAGAGAAGCTGGGCAAGACTCCTGCGCAAGTGGCTATCCGATGGGGGCTACAATCGGGTCACAGTGTACTGCCTAAGAGCACAAAGGAGGATAGGATCAAGGAAAACTTTGATGTTTTTGATTGGTCTATACCTGAAGACTTGCTTGCAAACTTTGCTGAAGTAAAGCAGGAAAGGTTAGTGAAAGGTACTGGATTTGTCAACAAGGAGCACGGTGCCTACAAGACCATTGAGGAGCTCTGGGATGGAGAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00040 ko00561 ko00930 ko01100 ko01110 ko01120 ko01130 ko01220 map00010 map00040 map00561 map00930 map01100 map01110 map01120 map01130 map01220
Pfam Domains
Protein Families
Aldo_ket_red

Protein Analysis

316

Amino Acids

34.72

Weight (kDa)

7.09

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldo_ket_red PF00248 19 - 284 4.7e-55 Aldo/keto reductase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 717
AccB1I GGYRCC 1 cut(s) 905
AccB7I CCANNNNNTGG 1 cut(s) 417
AccII CGCG 2 cut(s) 219, 517
AciI CCGC 7 cut(s) 5, 99, 108, 111, 277, 369, 528
AclWI GGATC 4 cut(s) 239, 624, 637, 794
AcoI YGGCCR 1 cut(s) 344
AcsI RAATTY 1 cut(s) 581
AcuI CTGAAG 3 cut(s) 206, 846, 870
AcvI CACGTG 1 cut(s) 69
AcyI GRCGYC 1 cut(s) 87
AfaI GTAC 4 cut(s) 295, 415, 759, 880
AfiI CCNNNNNNNGG 3 cut(s) 56, 346, 417
AflII CTTAAG 2 cut(s) 607, 665
AgsI TTSAA 1 cut(s) 240
AjnI CCWGG 3 cut(s) 82, 455, 634
AjuI GAANNNNNNNTTGG 2 cut(s) 156, 188
AleI CACNNNNGTG 1 cut(s) 609
AluBI AGCT 7 cut(s) 28, 152, 193, 493, 574, 700, 928
AluI AGCT 7 cut(s) 28, 152, 193, 493, 574, 700, 928
Alw21I GWGCWC 5 cut(s) 30, 148, 773, 903, 930
AlwI GGATC 4 cut(s) 239, 624, 637, 794
AoxI GGCC 4 cut(s) 39, 75, 344, 453
ApeKI GCWGC 4 cut(s) 95, 434, 562, 565
ApoI RAATTY 1 cut(s) 581
Asp700I GAANNNNTTC 1 cut(s) 12
AspLEI GCGC 4 cut(s) 219, 517, 519, 718
AspS9I GGNCC 1 cut(s) 39
AsuC2I CCSGG 1 cut(s) 37
AsuHPI GGTGA 3 cut(s) 97, 612, 668
BaeGI GKGCMC 1 cut(s) 68
BamHI GGATCC 1 cut(s) 629
BanI GGYRCC 1 cut(s) 905
BanII GRGCYC 2 cut(s) 30, 930
BbrPI CACGTG 1 cut(s) 69
BbsI GAAGAC 1 cut(s) 834
Bbv12I GWGCWC 5 cut(s) 30, 148, 773, 903, 930
BbvI GCAGC 4 cut(s) 82, 446, 574, 577
BccI CCATC 3 cut(s) 197, 726, 929
BceAI ACGGC 2 cut(s) 86, 98
BciT130I CCWGG 3 cut(s) 84, 457, 636
BcnI CCSGG 1 cut(s) 37
BfrI CTTAAG 2 cut(s) 607, 665
BisI GCNGC 6 cut(s) 96, 99, 111, 435, 563, 566
BlsI GCNGC 6 cut(s) 97, 100, 112, 436, 564, 567
BmcAI AGTACT 1 cut(s) 415
Bme1390I CCNGG 4 cut(s) 37, 84, 457, 636
BmgT120I GGNCC 1 cut(s) 39
BmiI GGNNCC 4 cut(s) 40, 367, 631, 907
BmrFI CCNGG 4 cut(s) 37, 84, 457, 636
BmrI ACTGGG 2 cut(s) 71, 405
BmsI GCATC 1 cut(s) 528
BmuI ACTGGG 2 cut(s) 71, 405
BpiI GAAGAC 1 cut(s) 834
BpmI CTGGAG 1 cut(s) 449
BpuEI CTTGAG 1 cut(s) 132
BpuMI CCSGG 1 cut(s) 37
BsaAI YACGTR 1 cut(s) 69
BsaBI GATNNNNATC 1 cut(s) 330
BsaHI GRCGYC 1 cut(s) 87
BsaJI CCNNGG 4 cut(s) 36, 456, 594, 634
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 346, 417
Bse118I RCCGGY 1 cut(s) 346
Bse1I ACTGG 5 cut(s) 66, 347, 411, 432, 886
Bse8I GATNNNNATC 1 cut(s) 330
BseBI CCWGG 3 cut(s) 84, 457, 636
BseDI CCNNGG 4 cut(s) 36, 456, 594, 634
BseGI GGATG 2 cut(s) 519, 940
BseJI GATNNNNATC 1 cut(s) 330
BseLI CCNNNNNNNGG 3 cut(s) 56, 346, 417
BseMII CTCAG 1 cut(s) 569
BseNI ACTGG 5 cut(s) 66, 347, 411, 432, 886
BsePI GCGCGC 1 cut(s) 515
BseRI GAGGAG 1 cut(s) 938
BseSI GKGCMC 1 cut(s) 68
BseXI GCAGC 4 cut(s) 82, 446, 574, 577
BseYI CCCAGC 1 cut(s) 700
Bsh1236I CGCG 2 cut(s) 219, 517
BshFI GGCC 4 cut(s) 41, 77, 346, 455
BshNI GGYRCC 1 cut(s) 905
BsiHKAI GWGCWC 5 cut(s) 30, 148, 773, 903, 930
BsiSI CCGG 2 cut(s) 36, 347
BslI CCNNNNNNNGG 3 cut(s) 56, 346, 417
BsmI GAATGC 1 cut(s) 551
BsnI GGCC 4 cut(s) 41, 77, 346, 455
Bsp1286I GDGCHC 6 cut(s) 30, 68, 148, 773, 903, 930
Bsp143I GATC 4 cut(s) 231, 325, 629, 786
BspACI CCGC 7 cut(s) 5, 99, 108, 111, 277, 369, 528
BspANI GGCC 4 cut(s) 41, 77, 346, 455
BspCNI CTCAG 1 cut(s) 568
BspFNI CGCG 2 cut(s) 219, 517
BspLI GGNNCC 4 cut(s) 40, 367, 631, 907
BspPI GGATC 4 cut(s) 239, 624, 637, 794
BspT107I GGYRCC 1 cut(s) 905
BspTI CTTAAG 2 cut(s) 607, 665
BsrFI RCCGGY 1 cut(s) 346
BsrI ACTGG 5 cut(s) 66, 347, 411, 432, 886
BssAI RCCGGY 1 cut(s) 346
BssECI CCNNGG 4 cut(s) 36, 456, 594, 634
BssHII GCGCGC 1 cut(s) 515
BssMI GATC 4 cut(s) 231, 325, 629, 786
BssNI GRCGYC 1 cut(s) 87
BssT1I CCWWGG 1 cut(s) 594
Bst2UI CCWGG 3 cut(s) 84, 457, 636
Bst4CI ACNGT 2 cut(s) 755, 905
BstACI GRCGYC 1 cut(s) 87
BstAFI CTTAAG 2 cut(s) 607, 665
BstAPI GCANNNNNTGC 1 cut(s) 845
BstBAI YACGTR 1 cut(s) 69
BstC8I GCNNGC 4 cut(s) 75, 373, 517, 837
BstDEI CTNAG 2 cut(s) 555, 765
BstF5I GGATG 2 cut(s) 519, 940
BstFNI CGCG 2 cut(s) 219, 517
BstHHI GCGC 4 cut(s) 219, 517, 519, 718
BstKTI GATC 4 cut(s) 234, 328, 632, 789
BstMBI GATC 4 cut(s) 231, 325, 629, 786
BstMWI GCNNNNNNNGC 7 cut(s) 79, 107, 431, 571, 645, 722, 845
BstNI CCWGG 3 cut(s) 84, 457, 636
BstSCI CCNGG 4 cut(s) 35, 82, 455, 634
BstSLI GKGCMC 1 cut(s) 68
BstUI CGCG 2 cut(s) 219, 517
BstV1I GCAGC 4 cut(s) 82, 446, 574, 577
BstV2I GAAGAC 1 cut(s) 834
BstX2I RGATCY 1 cut(s) 629
BstXI CCANNNNNNTGG 1 cut(s) 611
BstYI RGATCY 1 cut(s) 629
BsuRI GGCC 4 cut(s) 41, 77, 346, 455
BtsCI GGATG 2 cut(s) 519, 940
BtsIMutI CAGTG 4 cut(s) 340, 425, 563, 760
Cac8I GCNNGC 4 cut(s) 75, 373, 517, 837
CfoI GCGC 4 cut(s) 219, 517, 519, 718
Cfr10I RCCGGY 1 cut(s) 346
Cfr13I GGNCC 1 cut(s) 39
CseI GACGC 1 cut(s) 76
Csp6I GTAC 4 cut(s) 294, 414, 758, 879
CviAII CATG 2 cut(s) 260, 578
CviQI GTAC 4 cut(s) 294, 414, 758, 879
DdeI CTNAG 2 cut(s) 555, 765
DpnI GATC 4 cut(s) 233, 327, 631, 788
DpnII GATC 4 cut(s) 231, 325, 629, 786
EaeI YGGCCR 1 cut(s) 344
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 2 cut(s) 28, 928
Eco130I CCWWGG 1 cut(s) 594
Eco24I GRGCYC 2 cut(s) 30, 930
Eco32I GATATC 1 cut(s) 128
Eco53kI GAGCTC 2 cut(s) 28, 928
Eco57I CTGAAG 3 cut(s) 206, 846, 870
Eco72I CACGTG 1 cut(s) 69
EcoICRI GAGCTC 2 cut(s) 28, 928
EcoRI GAATTC 1 cut(s) 581
EcoRII CCWGG 3 cut(s) 82, 455, 634
EcoRV GATATC 1 cut(s) 128
EcoT14I CCWWGG 1 cut(s) 594
EcoT38I GRGCYC 2 cut(s) 30, 930
ErhI CCWWGG 1 cut(s) 594
FaeI CATG 2 cut(s) 263, 581
FalI AAGNNNNNCTT 4 cut(s) 782, 814, 819, 851
FatI CATG 2 cut(s) 259, 577
FauI CCCGC 1 cut(s) 535
FauNDI CATATG 1 cut(s) 439
Fnu4HI GCNGC 6 cut(s) 96, 99, 111, 435, 563, 566
FokI GGATG 1 cut(s) 506
FriOI GRGCYC 2 cut(s) 30, 930
Fsp4HI GCNGC 6 cut(s) 96, 99, 111, 435, 563, 566
FspI TGCGCA 1 cut(s) 717
GlaI GCGC 4 cut(s) 218, 516, 518, 717
GluI GCNGC 6 cut(s) 96, 99, 111, 435, 563, 566
GsaI CCCAGC 1 cut(s) 704
GsuI CTGGAG 1 cut(s) 449
HaeIII GGCC 4 cut(s) 41, 77, 346, 455
HapII CCGG 2 cut(s) 36, 347
HgaI GACGC 1 cut(s) 76
HhaI GCGC 4 cut(s) 219, 517, 519, 718
Hin1I GRCGYC 1 cut(s) 87
Hin1II CATG 2 cut(s) 263, 581
Hin6I GCGC 4 cut(s) 217, 515, 517, 716
HinP1I GCGC 4 cut(s) 217, 515, 517, 716
HincII GTYRAC 1 cut(s) 892
HindII GTYRAC 1 cut(s) 892
HindIII AAGCTT 2 cut(s) 150, 191
HinfI GANTC 5 cut(s) 46, 443, 600, 670, 709
HpaII CCGG 2 cut(s) 36, 347
HphI GGTGA 3 cut(s) 97, 612, 668
Hpy166II GTNNAC 3 cut(s) 604, 758, 892
Hpy188I TCNGA 3 cut(s) 59, 186, 731
Hpy188III TCNNGA 3 cut(s) 323, 352, 447
Hpy8I GTNNAC 3 cut(s) 604, 758, 892
Hpy99I CGWCG 2 cut(s) 92, 95
HpyAV CCTTC 1 cut(s) 274
HpyCH4III ACNGT 2 cut(s) 755, 905
HpyCH4IV ACGT 1 cut(s) 68
HpyCH4V TGCA 3 cut(s) 263, 301, 839
HpyF10VI GCNNNNNNNGC 7 cut(s) 79, 107, 431, 571, 645, 722, 845
HpyF3I CTNAG 2 cut(s) 555, 765
HpySE526I ACGT 1 cut(s) 68
Hsp92I GRCGYC 1 cut(s) 87
Hsp92II CATG 2 cut(s) 263, 581
HspAI GCGC 4 cut(s) 217, 515, 517, 716
Kzo9I GATC 4 cut(s) 231, 325, 629, 786
LmnI GCTCC 2 cut(s) 898, 925
Lsp1109I GCAGC 4 cut(s) 82, 446, 574, 577
LweI GCATC 1 cut(s) 528
MaeII ACGT 1 cut(s) 68
MaeIII GTNAC 2 cut(s) 103, 749
MalI GATC 4 cut(s) 233, 327, 631, 788
MboI GATC 4 cut(s) 231, 325, 629, 786
MboII GAAGA 4 cut(s) 199, 281, 370, 839
MflI RGATCY 1 cut(s) 629
MhlI GDGCHC 6 cut(s) 30, 68, 148, 773, 903, 930
MluCI AATT 5 cut(s) 12, 475, 581, 675, 941
MlyI GAGTC 3 cut(s) 437, 609, 703
MmeI TCCRAC 2 cut(s) 37, 103
MnlI CCTC 6 cut(s) 214, 424, 534, 564, 772, 916
MroXI GAANNNNTTC 1 cut(s) 12
MseI TTAA 5 cut(s) 378, 534, 608, 651, 666
MslI CAYNNNNRTG 1 cut(s) 609
MspA1I CMGCKG 2 cut(s) 371, 530
MspCI CTTAAG 2 cut(s) 607, 665
MspI CCGG 2 cut(s) 36, 347
MspR9I CCNGG 4 cut(s) 37, 84, 457, 636
Mva1269I GAATGC 1 cut(s) 551
MvaI CCWGG 3 cut(s) 84, 457, 636
MvnI CGCG 2 cut(s) 219, 517
MwoI GCNNNNNNNGC 7 cut(s) 79, 107, 431, 571, 645, 722, 845
NciI CCSGG 1 cut(s) 37
NdeI CATATG 1 cut(s) 439
NdeII GATC 4 cut(s) 231, 325, 629, 786
NlaIII CATG 2 cut(s) 263, 581
NlaIV GGNNCC 4 cut(s) 40, 367, 631, 907
NmeAIII GCCGAG 2 cut(s) 103, 474
NmuCI GTSAC 2 cut(s) 103, 749
NsbI TGCGCA 1 cut(s) 717
OliI CACNNNNGTG 1 cut(s) 609
PauI GCGCGC 1 cut(s) 515
PcsI WCGNNNNNNNCGW 2 cut(s) 99, 321
PctI GAATGC 1 cut(s) 551
PdmI GAANNNNTTC 1 cut(s) 12
PfeI GAWTC 2 cut(s) 46, 670
PflMI CCANNNNNTGG 1 cut(s) 417
PkrI GCNGC 6 cut(s) 97, 100, 112, 436, 564, 567
PleI GAGTC 3 cut(s) 437, 608, 703
PmaCI CACGTG 1 cut(s) 69
PmlI CACGTG 1 cut(s) 69
PpsI GAGTC 3 cut(s) 437, 608, 703
Ppu21I YACGTR 1 cut(s) 69
Psp124BI GAGCTC 2 cut(s) 30, 930
Psp6I CCWGG 3 cut(s) 82, 455, 634
PspCI CACGTG 1 cut(s) 69
PspFI CCCAGC 1 cut(s) 700
PspGI CCWGG 3 cut(s) 82, 455, 634
PspN4I GGNNCC 4 cut(s) 40, 367, 631, 907
PspPI GGNCC 1 cut(s) 39
PsuI RGATCY 1 cut(s) 629
PteI GCGCGC 1 cut(s) 515
RsaI GTAC 4 cut(s) 295, 415, 759, 880
RsaNI GTAC 4 cut(s) 294, 414, 758, 879
RseI CAYNNNNRTG 1 cut(s) 609
SacI GAGCTC 2 cut(s) 30, 930
SaqAI TTAA 5 cut(s) 378, 534, 608, 651, 666
SatI GCNGC 6 cut(s) 96, 99, 111, 435, 563, 566
Sau3AI GATC 4 cut(s) 231, 325, 629, 786
Sau96I GGNCC 1 cut(s) 39
ScaI AGTACT 1 cut(s) 415
SchI GAGTC 3 cut(s) 437, 609, 703
ScrFI CCNGG 4 cut(s) 37, 84, 457, 636
SduI GDGCHC 6 cut(s) 30, 68, 148, 773, 903, 930
SfaNI GCATC 1 cut(s) 528
SmiMI CAYNNNNRTG 1 cut(s) 609
SmlI CTYRAG 3 cut(s) 147, 607, 665
SmoI CTYRAG 3 cut(s) 147, 607, 665
Sse9I AATT 5 cut(s) 12, 475, 581, 675, 941
SsiI CCGC 7 cut(s) 5, 99, 108, 111, 277, 369, 528
SstI GAGCTC 2 cut(s) 30, 930
StyD4I CCNGG 4 cut(s) 35, 82, 455, 634
StyI CCWWGG 1 cut(s) 594
TaaI ACNGT 2 cut(s) 755, 905
TaiI ACGT 1 cut(s) 71
TaqI TCGA 2 cut(s) 315, 324
TasI AATT 5 cut(s) 12, 475, 581, 675, 941
TatI WGTACW 2 cut(s) 413, 757
TauI GCSGC 2 cut(s) 101, 113
TfiI GAWTC 2 cut(s) 46, 670
Tru1I TTAA 5 cut(s) 378, 534, 608, 651, 666
Tru9I TTAA 5 cut(s) 378, 534, 608, 651, 666
TscAI CASTG 4 cut(s) 347, 432, 563, 760
TseFI GTSAC 2 cut(s) 103, 749
TseI GCWGC 4 cut(s) 95, 434, 562, 565
Tsp45I GTSAC 2 cut(s) 103, 749
TspDTI ATGAA 3 cut(s) 177, 371, 594
TspGWI ACGGA 1 cut(s) 39
TspRI CASTG 4 cut(s) 347, 432, 563, 760
Van91I CCANNNNNTGG 1 cut(s) 417
Vha464I CTTAAG 2 cut(s) 607, 665
XapI RAATTY 1 cut(s) 581
XmnI GAANNNNTTC 1 cut(s) 12
ZrmI AGTACT 1 cut(s) 415
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.