Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002704

Physical Location & Seq

Genomic Coordinates Forward (+)

25193270 .. 25195242

Gene Structure 1973 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G261700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 927 bp

ATGGCGAACGCATTTCAGTTTTTTGAGCTGAACACCGGCGCCAAGATGCCTTCCGTTGGGTTAGGCACATATCGCGCCGATACTCATCTCATCGGCGATGTCCTCTCCGCTGCCATTAAGGTTGGATATCGCCAAATCGATTGTGCTCAAATGTATGGCAATGAGAAGGAGATTGGTTTTGCTCTGAAGAAGCTGTTTAGCGATGGGGCTGTGAAGCGTGAGGACTTATGGATCACCTCCAAACTCTGGTGTACTGATCATGAACCAGATGATGTGCCAAAGGCATTTGATAAAACTTTGGAGGAATTGCAGCTTGACTATCTGGATCTCTATCTTATCCACTGGCCAGTGAGCATGAAAAAGGGGTCAGTTGGCTCTGATCCTCAAAACCTTACCCAACCTAATATACCCAGTACATGGAAAGCAATGGAGGCACTCTTTGACTCTGGCAAGGCCAGGGCTATTGGAGTTAGCAACTTCTCTTCAAAGAAGCTTGGAGATCTGTTAGAGGTGGCACGAATACCTCCAGCTGTTAATCAAGTGGAATTGCACCCTCACTGGCAGCAACCGAAGCTGCACACTTTCTGTAAATCTAAGGGAGTTCAGTTATCTGGCTATTGTCCATTGGCAAGGAATAAGGTCCTTAAGAATTTAATTGTGAACTTGGTGGCAGAAAAACTGGGCAAGACTCCTGCCCAAGTGACTCTTCGATGGGGGTTACAAATGGGTCACAGTGTAGTGCCTAAAAGCACGAATCAGGCAAGGATACAGGAAAACTTTGATCTTTTTGATTGGTGTATACCCGACGACTTGTTTGCCAAATTCTCTGAAATTAAGCAGGTGAAGCTTGTTCCAGGAACTGGTTTTGTACATGCGACTTTGGGTGCGTACAGGACCCTTGAAGAACTGTGGGATGGCGAGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00040 ko00561 ko00930 ko01100 ko01110 ko01120 ko01130 ko01220 map00010 map00040 map00561 map00930 map01100 map01110 map01120 map01130 map01220

Pfam Domains

Protein Families

Aldo_ket_red

Protein Analysis

309

Amino Acids

34.46

Weight (kDa)

7.08

Isoelectric Point (pI)

27.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002704)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g13021 FvH4_6g13030
malus_domestica	MD00G1141700.v1.1 MD12G1149800.v1.1 MD12G1150000.v1.1
prunus_persica	Prupe.6G261600_v2.0.a1 Prupe.6G261700_v2.0.a1
pyrus_communis	pycom04g12310 pycom12g14360 pycom12g14370 pycom12g14380
rosa_chinensis	RchiOBHm_Chr3g0465241 RchiOBHm_Chr3g0465281 RchiOBHm_Chr3g0465291 RchiOBHm_Chr3g0465301
rosa_multiflora	Rmu_co8361281.1_g000001 Rmu_sc0005190.1_g000002 Rmu_sc0005190.1_g000003 Rmu_sc0005190.1_g000004 Rmu_sc0005190.1_g000005 Rmu_sc0015811.1_g000003 Rmu_sc0029050.1_g000001 Rmu_sc0029051.1_g000001
rosa_roxburghii	Rroxscaffold_6G00415140 Rroxscaffold_6G00415150 Rroxscaffold_6G00415180
rosa_rugosa	Rorug03G0076200 Rorug03G0076200
rosa_samantha	Rh3BG140300 Rh3BG140600 Rh3BG140700 Rh3BG140800 Rh3DG141700 Rh3DG141800 Rh3DG141900
rosa_wichuraiana	Rw3G011480 Rw3G011500 Rw3G011510 Rw3G011520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	829
Acc36I	ACCTGC	1 cut(s)	829
AccB1I	GGYRCC	1 cut(s)	38
AccB7I	CCANNNNNTGG	3 cut(s)	246, 417, 860
AccI	GTMKAC	1 cut(s)	799
AccII	CGCG	1 cut(s)	75
AciI	CCGC	1 cut(s)	108
AclWI	GGATC	3 cut(s)	239, 333, 374
AcoI	YGGCCR	1 cut(s)	344
AcsI	RAATTY	2 cut(s)	649, 821
AcuI	CTGAAG	1 cut(s)	206
AcyI	GRCGYC	1 cut(s)	39
AfaI	GTAC	4 cut(s)	253, 415, 870, 890
AfiI	CCNNNNNNNGG	4 cut(s)	56, 246, 417, 860
AflII	CTTAAG	1 cut(s)	644
AgsI	TTSAA	2 cut(s)	486, 902
AjnI	CCWGG	2 cut(s)	455, 853
AjuI	GAANNNNNNNTTGG	2 cut(s)	690, 722
AluBI	AGCT	7 cut(s)	28, 193, 313, 493, 530, 574, 847
AluI	AGCT	7 cut(s)	28, 193, 313, 493, 530, 574, 847
Alw21I	GWGCWC	1 cut(s)	148
AlwI	GGATC	3 cut(s)	239, 333, 374
AlwNI	CAGNNNCTG	1 cut(s)	860
AoxI	GGCC	2 cut(s)	344, 453
ApeKI	GCWGC	4 cut(s)	110, 310, 562, 574
ApoI	RAATTY	2 cut(s)	649, 821
ArsI	GACNNNNNNTTYG	2 cut(s)	797, 829
AspLEI	GCGC	2 cut(s)	41, 77
AspS9I	GGNCC	2 cut(s)	640, 894
AsuHPI	GGTGA	2 cut(s)	226, 853
AvaII	GGWCC	2 cut(s)	640, 894
BalI	TGGCCA	1 cut(s)	346
BanI	GGYRCC	1 cut(s)	38
Bbv12I	GWGCWC	1 cut(s)	148
BbvI	GCAGC	4 cut(s)	97, 322, 561, 574
BccI	CCATC	3 cut(s)	197, 705, 908
BcgI	CGANNNNNNTGC	2 cut(s)	797, 831
BciT130I	CCWGG	2 cut(s)	457, 855
BciVI	GTATCC	1 cut(s)	759
BclI	TGATCA	1 cut(s)	256
BfoI	RGCGCY	1 cut(s)	42
BfrI	CTTAAG	1 cut(s)	644
BfuAI	ACCTGC	1 cut(s)	829
BfuI	GTATCC	1 cut(s)	759
BglII	AGATCT	1 cut(s)	499
BisI	GCNGC	4 cut(s)	111, 311, 563, 575
BlsI	GCNGC	4 cut(s)	112, 312, 564, 576
Bme1390I	CCNGG	2 cut(s)	457, 855
Bme18I	GGWCC	2 cut(s)	640, 894
BmgT120I	GGNCC	2 cut(s)	640, 894
BmiI	GGNNCC	2 cut(s)	40, 896
BmrFI	CCNGG	2 cut(s)	457, 855
BmrI	ACTGGG	2 cut(s)	405, 689
BmsI	GCATC	1 cut(s)	36
BmuI	ACTGGG	2 cut(s)	405, 689
BpmI	CTGGAG	1 cut(s)	510
Bsa29I	ATCGAT	1 cut(s)	138
BsaBI	GATNNNNATC	2 cut(s)	84, 330
BsaHI	GRCGYC	1 cut(s)	39
BsaJI	CCNNGG	1 cut(s)	456
Bsc4I	CCNNNNNNNGG	4 cut(s)	56, 246, 417, 860
Bse118I	RCCGGY	1 cut(s)	35
Bse1I	ACTGG	6 cut(s)	347, 347, 411, 563, 684, 865
Bse3DI	GCAATG	2 cut(s)	166, 432
Bse8I	GATNNNNATC	2 cut(s)	84, 330
BseBI	CCWGG	2 cut(s)	457, 855
BseCI	ATCGAT	1 cut(s)	138
BseDI	CCNNGG	1 cut(s)	456
BseGI	GGATG	1 cut(s)	919
BseJI	GATNNNNATC	2 cut(s)	84, 330
BseLI	CCNNNNNNNGG	4 cut(s)	56, 246, 417, 860
BseMI	GCAATG	2 cut(s)	166, 432
BseNI	ACTGG	6 cut(s)	347, 347, 411, 563, 684, 865
BseXI	GCAGC	4 cut(s)	97, 322, 561, 574
BsgI	GTGCAG	1 cut(s)	560
Bsh1236I	CGCG	1 cut(s)	75
BshFI	GGCC	2 cut(s)	346, 455
BshNI	GGYRCC	1 cut(s)	38
BshVI	ATCGAT	1 cut(s)	138
BsiHKAI	GWGCWC	1 cut(s)	148
BsiSI	CCGG	1 cut(s)	36
BslI	CCNNNNNNNGG	4 cut(s)	56, 246, 417, 860
BsnI	GGCC	2 cut(s)	346, 455
Bsp1286I	GDGCHC	1 cut(s)	148
Bsp1407I	TGTACA	1 cut(s)	868
Bsp143I	GATC	6 cut(s)	231, 256, 325, 379, 499, 781
BspACI	CCGC	1 cut(s)	108
BspANI	GGCC	2 cut(s)	346, 455
BspDI	ATCGAT	1 cut(s)	138
BspFNI	CGCG	1 cut(s)	75
BspHI	TCATGA	1 cut(s)	259
BspLI	GGNNCC	2 cut(s)	40, 896
BspMI	ACCTGC	1 cut(s)	829
BspPI	GGATC	3 cut(s)	239, 333, 374
BspT107I	GGYRCC	1 cut(s)	38
BspTI	CTTAAG	1 cut(s)	644
BsrDI	GCAATG	2 cut(s)	166, 432
BsrFI	RCCGGY	1 cut(s)	35
BsrGI	TGTACA	1 cut(s)	868
BsrI	ACTGG	6 cut(s)	347, 347, 411, 563, 684, 865
BssAI	RCCGGY	1 cut(s)	35
BssECI	CCNNGG	1 cut(s)	456
BssMI	GATC	6 cut(s)	231, 256, 325, 379, 499, 781
BssNAI	GTATAC	1 cut(s)	800
BssNI	GRCGYC	1 cut(s)	39
Bst1107I	GTATAC	1 cut(s)	800
Bst2UI	CCWGG	2 cut(s)	457, 855
Bst4CI	ACNGT	2 cut(s)	734, 909
Bst6I	CTCTTC	2 cut(s)	487, 711
BstACI	GRCGYC	1 cut(s)	39
BstAFI	CTTAAG	1 cut(s)	644
BstAUI	TGTACA	1 cut(s)	868
BstDEI	CTNAG	1 cut(s)	594
BstF5I	GGATG	1 cut(s)	919
BstFNI	CGCG	1 cut(s)	75
BstH2I	RGCGCY	1 cut(s)	42
BstHHI	GCGC	2 cut(s)	41, 77
BstKTI	GATC	6 cut(s)	234, 259, 328, 382, 502, 784
BstMBI	GATC	6 cut(s)	231, 256, 325, 379, 499, 781
BstMWI	GCNNNNNNNGC	4 cut(s)	72, 431, 571, 844
BstNI	CCWGG	2 cut(s)	457, 855
BstNSI	RCATGY	1 cut(s)	875
BstSCI	CCNGG	2 cut(s)	455, 853
BstUI	CGCG	1 cut(s)	75
BstV1I	GCAGC	4 cut(s)	97, 322, 561, 574
BstX2I	RGATCY	2 cut(s)	325, 499
BstYI	RGATCY	2 cut(s)	325, 499
BstZ17I	GTATAC	1 cut(s)	800
Bsu15I	ATCGAT	1 cut(s)	138
BsuI	GTATCC	1 cut(s)	759
BsuRI	GGCC	2 cut(s)	346, 455
BsuTUI	ATCGAT	1 cut(s)	138
BtgZI	GCGATG	2 cut(s)	111, 216
BtsCI	GGATG	1 cut(s)	919
BtsIMutI	CAGTG	4 cut(s)	340, 354, 556, 739
BveI	ACCTGC	1 cut(s)	829
CaiI	CAGNNNCTG	1 cut(s)	860
CciI	TCATGA	1 cut(s)	259
CfoI	GCGC	2 cut(s)	41, 77
Cfr10I	RCCGGY	1 cut(s)	35
Cfr13I	GGNCC	2 cut(s)	640, 894
ClaI	ATCGAT	1 cut(s)	138
Csp6I	GTAC	4 cut(s)	252, 414, 869, 889
CviAII	CATG	4 cut(s)	260, 355, 417, 872
CviQI	GTAC	4 cut(s)	252, 414, 869, 889
DdeI	CTNAG	1 cut(s)	594
DinI	GGCGCC	1 cut(s)	40
DpnI	GATC	6 cut(s)	233, 258, 327, 381, 501, 783
DpnII	GATC	6 cut(s)	231, 256, 325, 379, 499, 781
EaeI	YGGCCR	1 cut(s)	344
Eam1104I	CTCTTC	2 cut(s)	487, 711
EarI	CTCTTC	2 cut(s)	487, 711
Eco32I	GATATC	1 cut(s)	128
Eco47I	GGWCC	2 cut(s)	640, 894
Eco57I	CTGAAG	1 cut(s)	206
EcoO109I	RGGNCCY	2 cut(s)	640, 894
EcoRII	CCWGG	2 cut(s)	455, 853
EcoRV	GATATC	1 cut(s)	128
EgeI	GGCGCC	1 cut(s)	40
EheI	GGCGCC	1 cut(s)	40
FaeI	CATG	4 cut(s)	263, 358, 420, 875
FaiI	YATR	9 cut(s)	70, 156, 229, 261, 356, 407, 418, 800, 873
FalI	AAGNNNNNCTT	2 cut(s)	690, 722
FatI	CATG	4 cut(s)	259, 354, 416, 871
FbaI	TGATCA	1 cut(s)	256
FblI	GTMKAC	1 cut(s)	799
Fnu4HI	GCNGC	4 cut(s)	111, 311, 563, 575
Fsp4HI	GCNGC	4 cut(s)	111, 311, 563, 575
GlaI	GCGC	2 cut(s)	40, 76
GluI	GCNGC	4 cut(s)	111, 311, 563, 575
GsuI	CTGGAG	1 cut(s)	510
HaeII	RGCGCY	1 cut(s)	42
HaeIII	GGCC	2 cut(s)	346, 455
HapII	CCGG	1 cut(s)	36
HhaI	GCGC	2 cut(s)	41, 77
Hin1I	GRCGYC	1 cut(s)	39
Hin1II	CATG	4 cut(s)	263, 358, 420, 875
Hin6I	GCGC	2 cut(s)	39, 75
HinP1I	GCGC	2 cut(s)	39, 75
HindIII	AAGCTT	2 cut(s)	491, 845
HinfI	GANTC	4 cut(s)	443, 688, 703, 754
HpaII	CCGG	1 cut(s)	36
HphI	GGTGA	2 cut(s)	226, 853
Hpy166II	GTNNAC	3 cut(s)	252, 661, 800
Hpy188I	TCNGA	3 cut(s)	186, 379, 829
Hpy188III	TCNNGA	2 cut(s)	260, 323
Hpy8I	GTNNAC	3 cut(s)	252, 661, 800
Hpy99I	CGWCG	1 cut(s)	809
HpyAV	CCTTC	2 cut(s)	60, 160
HpyCH4III	ACNGT	2 cut(s)	734, 909
HpyCH4V	TGCA	3 cut(s)	310, 550, 577
HpyF10VI	GCNNNNNNNGC	4 cut(s)	72, 431, 571, 844
HpyF3I	CTNAG	1 cut(s)	594
Hsp92I	GRCGYC	1 cut(s)	39
Hsp92II	CATG	4 cut(s)	263, 358, 420, 875
HspAI	GCGC	2 cut(s)	39, 75
KasI	GGCGCC	1 cut(s)	38
Ksp22I	TGATCA	1 cut(s)	256
Kzo9I	GATC	6 cut(s)	231, 256, 325, 379, 499, 781
Lsp1109I	GCAGC	4 cut(s)	97, 322, 561, 574
LweI	GCATC	1 cut(s)	36
MaeIII	GTNAC	3 cut(s)	700, 717, 728
MalI	GATC	6 cut(s)	233, 258, 327, 381, 501, 783
MboI	GATC	6 cut(s)	231, 256, 325, 379, 499, 781
MboII	GAAGA	4 cut(s)	199, 474, 698, 914
MflI	RGATCY	2 cut(s)	325, 499
MhlI	GDGCHC	1 cut(s)	148
MlsI	TGGCCA	1 cut(s)	346
MluCI	AATT	6 cut(s)	305, 545, 649, 654, 821, 831
MluNI	TGGCCA	1 cut(s)	346
Mly113I	GGCGCC	1 cut(s)	39
MlyI	GAGTC	3 cut(s)	437, 682, 697
MmeI	TCCRAC	1 cut(s)	103
MnlI	CCTC	9 cut(s)	113, 214, 247, 295, 393, 424, 502, 534, 564
Mox20I	TGGCCA	1 cut(s)	346
MscI	TGGCCA	1 cut(s)	346
MseI	TTAA	5 cut(s)	117, 534, 645, 653, 834
Msp20I	TGGCCA	1 cut(s)	346
MspA1I	CMGCKG	2 cut(s)	110, 530
MspCI	CTTAAG	1 cut(s)	644
MspI	CCGG	1 cut(s)	36
MspR9I	CCNGG	2 cut(s)	457, 855
MvaI	CCWGG	2 cut(s)	457, 855
MvnI	CGCG	1 cut(s)	75
MwoI	GCNNNNNNNGC	4 cut(s)	72, 431, 571, 844
NarI	GGCGCC	1 cut(s)	39
NdeII	GATC	6 cut(s)	231, 256, 325, 379, 499, 781
NlaIII	CATG	4 cut(s)	263, 358, 420, 875
NlaIV	GGNNCC	2 cut(s)	40, 896
NmuCI	GTSAC	2 cut(s)	700, 728
NspI	RCATGY	1 cut(s)	875
PagI	TCATGA	1 cut(s)	259
PaqCI	CACCTGC	1 cut(s)	829
PfeI	GAWTC	1 cut(s)	754
PflMI	CCANNNNNTGG	3 cut(s)	246, 417, 860
PfoI	TCCNGGA	1 cut(s)	853
PkrI	GCNGC	4 cut(s)	112, 312, 564, 576
PleI	GAGTC	3 cut(s)	437, 682, 697
PluTI	GGCGCC	1 cut(s)	42
PpsI	GAGTC	3 cut(s)	437, 682, 697
PpuMI	RGGWCCY	2 cut(s)	640, 894
Psp5II	RGGWCCY	2 cut(s)	640, 894
Psp6I	CCWGG	2 cut(s)	455, 853
PspGI	CCWGG	2 cut(s)	455, 853
PspN4I	GGNNCC	2 cut(s)	40, 896
PspPI	GGNCC	2 cut(s)	640, 894
PspPPI	RGGWCCY	2 cut(s)	640, 894
PstNI	CAGNNNCTG	1 cut(s)	860
PsuI	RGATCY	2 cut(s)	325, 499
PvuII	CAGCTG	1 cut(s)	530
RsaI	GTAC	4 cut(s)	253, 415, 870, 890
RsaNI	GTAC	4 cut(s)	252, 414, 869, 889
SaqAI	TTAA	5 cut(s)	117, 534, 645, 653, 834
SatI	GCNGC	4 cut(s)	111, 311, 563, 575
Sau3AI	GATC	6 cut(s)	231, 256, 325, 379, 499, 781
Sau96I	GGNCC	2 cut(s)	640, 894
SchI	GAGTC	3 cut(s)	437, 682, 697
ScrFI	CCNGG	2 cut(s)	457, 855
SduI	GDGCHC	1 cut(s)	148
SfaNI	GCATC	1 cut(s)	36
SfoI	GGCGCC	1 cut(s)	40
SgrAI	CRCCGGYG	1 cut(s)	35
SinI	GGWCC	2 cut(s)	640, 894
SmlI	CTYRAG	1 cut(s)	644
SmoI	CTYRAG	1 cut(s)	644
Sse9I	AATT	6 cut(s)	305, 545, 649, 654, 821, 831
SsiI	CCGC	1 cut(s)	108
SspDI	GGCGCC	1 cut(s)	38
StyD4I	CCNGG	2 cut(s)	455, 853
TaaI	ACNGT	2 cut(s)	734, 909
TaqI	TCGA	2 cut(s)	138, 709
TasI	AATT	6 cut(s)	305, 545, 649, 654, 821, 831
TatI	WGTACW	3 cut(s)	251, 413, 868
TfiI	GAWTC	1 cut(s)	754
Tru1I	TTAA	5 cut(s)	117, 534, 645, 653, 834
Tru9I	TTAA	5 cut(s)	117, 534, 645, 653, 834
TscAI	CASTG	4 cut(s)	347, 354, 563, 739
TseFI	GTSAC	2 cut(s)	700, 728
TseI	GCWGC	4 cut(s)	110, 310, 562, 574
Tsp45I	GTSAC	2 cut(s)	700, 728
TspDTI	ATGAA	2 cut(s)	276, 371
TspGWI	ACGGA	1 cut(s)	43
TspRI	CASTG	4 cut(s)	347, 354, 563, 739
Van91I	CCANNNNNTGG	3 cut(s)	246, 417, 860
Vha464I	CTTAAG	1 cut(s)	644
VpaK11BI	GGWCC	2 cut(s)	640, 894
XapI	RAATTY	2 cut(s)	649, 821
XceI	RCATGY	1 cut(s)	875
XmiI	GTMKAC	1 cut(s)	799

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.