MD00G1171200.v1.1

Protein transport protein sec16

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
39361117 .. 39368866
7750 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1171200.v1.1.491

Sequence Viewer

Length: 4275 bp
ATGGCTTCAAATCATCCTCCATTTCAGGTGGAGGATCTGACGGACGAGGATTTCTTTGATAAATTGGTTGAAGATGATCTGAGGCCCTCCGAATCAGGCCCCGAATATGGCCAGGGAAATGATTCCGATGACGGTAAGGCGTTCGCCAATCTGAGTATTGGTAGCTCTGTAGCTGTATCTGAGGATTCGGACCACGAAACCAAAACTACTGACGAAAATAAGCGGTTCGTAAATCCTAATGTTGGTGATTCTGCAGCTGTATCTGAGGATTCGGCTGCCAAACCCCAAACGAAAGAGGAAAAGGGTGCAGAAGAATCTAATTCATTCGTGTTTGATAGTGTAATTGAGTCGAATAATGCGGTTGATAATGATGCAGTGATCGAGTCGAATAATGGGGCGGAGGCAGTGAGATCCCAGTTGAGGTTGGATTCGACAGTGAGCAAGAGCAACGAGTCGGGAGCTTCAGGGGTTAAGGAGATAGGGTGGGGTTCTTTTTATGCCGATTCTGCGGATAATGGGATCCATGGGTTTGGATCGTACTCAGATTTTTTCAGTGAATTGGGGGATGGTTCGGGGGATTTTCCCATGAAAGTAGACGGAAGTTTGAGTACTGAATCGAAAACTGTACTCAATAATGAAGATCAAACAGCCCATCAAGAGGGTTTGAACCATTTGGTTAGTAACGAGCAATGTCAAGAGGGTCAAGTTTATGGGGGAAGTGAGCAGGATCAAAACAGTACAGAGTATTGGGAAAGTCTCTATCCAGGGTGGAAGTATGACGCTAACATGGGGCAATGGTATCAGGTGGACAGTTTCGATGTGCCTGCAAATGCTCAAGGGAGCGTTGGCACTGATGATTGGACCACTGTTTCTGATGGTAATAAGACTGAGGTTTCTTATTTTCAGCAGACAGCACAGTCTGCTGCCGGAACTGTGACTGAAACCAGCACGACTGGCAGTTTGTCAAACTGGGATCAGGTTTCACAGATGACAAATGGGTACCCGGAACATATGGTTTTCAATCCCGAATACCCAGGTTGGTATTATGACACAATTGCCCAAGAATGGCGCTCATTGGAAGCATATAGCTCCTCTGTGCAATCGACTGCTCAGTCCCAGAATGGAAATAGTATGTATGGTCAAGAGTACAGGCAAGATGAGAATTATGGGCCACAAGCGGTCGTCGGGAACCAAGGTCAAGACAGCAAGTGGGTTGGGTCCTACAGTAAGTACAATCAGCACGCTTCAAATATGTGGCAAGCTCAAACTGCAGCTAAAAGTGAGGGGTTTTCAGGTTTTAGTGGAAACCAGAAACAGAGTAATTCGTTTGGTTCTACAGTTAACACGGATCAGCACATGTCTTTAAATTCTTTTGGAGCAGTTCCTTTGTACAACAAAGCAAGTCAAGGTCATGGTTCAGCTAAAGAGACTGTTGGTTTCCAGAGTTTCATCCCGGCTGGGAACTTTAGCCAGCAGTTTAATCAAGGAAATGCAAAGATGAGCGAACAAATACAATTCTCAGATGATTACTATGGCGCTCAGAAACCTTTAAGTTACTCACAGCAACCTGTAAATTATTCACAACCACCTTTCCAGAGTGGCAATCAGTTTTCATATGCTCCCAGCGTAGGAAGATCATCTGCTGGGCGCCCTCCGCATGCCCTAGTAACTTTTGGATTTGGTGGAAAACTCATTTTAATGAAGGACAATAGTAGCCTCAGGAATCCGTCATATGGAACCCAGGATCCTGTAGGAGGCTCAGTTTCTGTCCTGAACTTAATGGAAGTTTTCACGGGAAAGACTGATCCTTCGAGTTTTGGAATGAGTACTTGTGATTATTTTCGTGCTTTGTGCCAACAATCATTCCCAGGTCCCTTGGTTGGAGGGAGTGTTGGAAGCAAAGAGCTGAATAAATGGATTGATGAGAGGATTGCTAACTGTGAATCGCCAGACATGGACTATAGGAAAGGCAAAGTATTGAGGTTGCTTCTTTCTTTGCTTAGGATAGCTTGTCAACATTACGGAAAACTTCGATATCCTTTTGGTACCGACACTGTATCAAGGGAAAATGATACTCCAGAATCAGCAGTTGCTAAACTTTTTGCATCTGCAAAGAGCAATAATGTGCAATTCAGTGATTATGGCTCTGTTAGCCACTGTGTGCAGAAAACGCCTTCAGAAGGACAATTGCGAGCAACTGCTTCTGAGGTACAAAATCTTCTGGTTTCTGGTAGAAAGAAAGAGGGTTTACAATGTGCACAAGAAGGTCAGTTGTGGGGACCTGCGCTTGTTATTGCTTCACAGCTTGGAGAACAGTTCTATGTTGATACTGTGAAGCAAATGGCACTTCGCCAGCTGGTTGCAGGATCACCTTTGCGGACTTTATGCCTGCTAATTGCAGGGCAACCTGCTGAAGTATTCTCTGCTGACACTACAGCTGAGGTCAATCTTCCAGGCGCTGCTAATACATCTCAACAGCTTGCACAGTTTGGTGCAAATAAAATGCTTGATGACTGGGAGGAGAATTTGGCTGTGATAACTGCAAACAGAACAAAAGATGATGAACTGGTTATTATACATCTTGGAGATTGCTTATGGAAGGATAGGAGTGAGATTACTGCAGCACACATCTGCTATTTAGTGGCAGAAGCAAATTTTGAGTCATACTCGGATAGTGCAAGGCTATGTCTAATTGGAGCAGATCACTGGAAGTCGCCTCGAACTTATGCTAATCCAGAGGCCATTCAGAGGACTGAACTCTATGAATATTCAAGGGTGCTTGGGAACTCTCAGTTCATCCTTCTACCATTTCAGCCATATAAGCTCATATATGCACACATGCTTGCTGAAGTTGGAAGAGTTTCTGACTCGTTGAAGTACTGTCAAACAATACTAAAGTCTTTGAAAACTGGTAGAGCACCTGAAGTGGAAACGTGGAAGCAACTAGTATTATCTCTTGAGGAGAGGATTAAAACCCATCAGCAGGGGGGATACTCTGTAAATTTAGTTTCTACAAAGTTTGTAGGTAAATTGCTCAACTTGTTTGATAGTACTGCACATCGTGTTGTTGGGGGCCTACCACCACCTGCACCGTCCACATCCCAAGGAAGTGCTCACGGTAATGACCATTACCAACAGCCCATGGGCCCTAGAGTTTCTAGTAGTCAATCAACAATGGCCATGTCATCATTAATTCCTTCTGCTTCAATGGAACCCATAAGTGACTGGACATCTGATGGCAACCGAAAGCCAATGCATAATAGAAGTGTTTCAGAGCCAGATTTTGGCAGAACTCCAAGACAGGTTGATTCATCAAAGCAAACGGCCTCACCTGATGCCCAAGGAAAATCCTCAGGGGGTTCTCGCTTTTCTCGTTTTGGTTTCGGGTCACAGCTCTTGCAAAAGACTGTTGGTTTAGTATTAAGACCCCGCCCAGGAAAACAGGCTAAGTTGGGTGAAACAAACAAGTTCTACTATGACGAAAAACTTAAAAGATGGGTTGAGGAAGGTGTTGAACCTCTAGCTGAAGATACCGTGTTGCCTCCTCCCCCGACATGTACACCCTTTCAGAATGGTGTCTCTGATTACAACTTGAGATCTGTTTTGAAGAAAGAAGGGTCTCCCACTAAGGGCAGCCCAGATTTACAAACTTCAACCCCTCCAGGACCAACTTCAGGGACCCCACCTATTCCACCTAGCTCAAATCAATTCTCATCCCGTGGACGGTTGGGTATTCGATCCAGATATGTCGACACATTCAACCAAGGTGGTGGAAGCCCAGTAAACTCGTTCGAGTCACCTGCTGTTCCATCCGTTAAGCCTCTTGTTGCTGCCAACGCAAAGTTTTTTATTCCCACCGTAGCACCATCAAATGAACAGGCAATGGAGGCTATTGCTGAAAGTGTACAAGAAGATGGTGGTGCAACTAATGAAAATCCTTCAACATTTGGTAATAATGATTCATTCCATACTCCTCCGCCTTCATCGTCATCATCAAATACCATGCAAAGGTACCCAAGCATGGGTAACATTCAAAGTATGGGAGTTGCCACAACTTCCAATGGCTCTGCTCCACCCCACTCACGAAGGACGGCCTCATGGGGTGGAAGCTCCAATGATGTATTAAGCCCTCCTATGGAAACGGGTGAGATAAAACCTCTAGGGGAGGCGTTAGGCATGTCCCCGGCAATGTTTAGGCCGAGTGAGCTTTCCCGGACACGCACCCCAATGAATGGAGGCAGTTTTGGTGATGACCTTCATGAAGTGGAACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1425

Amino Acids

154.43

Weight (kDa)

4.97

Isoelectric Point (pI)

48.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec16 PF12932 553 - 675 1.8e-21 Vesicle coat trafficking protein Sec16 mid-region
TPR_Sec16 PF12931 737 - 1025 6.4e-53 Sec16 Sec23-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 3094, 3808
AasI GACNNNNNNGTC 2 cut(s) 916, 1111
Acc36I ACCTGC 4 cut(s) 2290, 2416, 3094, 3808
Acc65I GGTACC 3 cut(s) 999, 2045, 4011
AccB1I GGYRCC 4 cut(s) 999, 1647, 2045, 4011
AccB7I CCANNNNNTGG 2 cut(s) 3284, 4232
AccI GTMKAC 2 cut(s) 594, 3750
AciI CCGC 9 cut(s) 223, 359, 398, 509, 1178, 1655, 2377, 3430, 3977
AcoI YGGCCR 2 cut(s) 109, 3177
AcsI RAATTY 4 cut(s) 1366, 2524, 2653, 3001
AcuI CTGAAG 7 cut(s) 447, 2160, 2433, 2868, 2943, 3546, 3657
AcyI GRCGYC 1 cut(s) 1648
AdeI CACNNNGTG 2 cut(s) 2161, 3062
AflIII ACRYGT 2 cut(s) 1356, 3554
AhlI ACTAGT 1 cut(s) 2944
AjnI CCWGG 8 cut(s) 111, 763, 1033, 1740, 1867, 2452, 3433, 3661
AloI GAACNNNNNNTCC 2 cut(s) 1729, 1761
Alw21I GWGCWC 3 cut(s) 2260, 2920, 3115
Alw26I GTCTC 4 cut(s) 761, 1421, 3583, 3624
Alw44I GTGCAC 1 cut(s) 2256
AlwNI CAGNNNCTG 2 cut(s) 1766, 2459
ApaI GGGCCC 1 cut(s) 3149
ApaLI GTGCAC 1 cut(s) 2256
ApeKI GCWGC 8 cut(s) 254, 275, 923, 1271, 2459, 2621, 3633, 3830
ApoI RAATTY 4 cut(s) 1366, 2524, 2653, 3001
ArsI GACNNNNNNTTYG 6 cut(s) 943, 975, 1792, 1824, 2645, 2677
AseI ATTAAT 1 cut(s) 3191
Asp700I GAANNNNTTC 3 cut(s) 121, 2860, 3268
Asp718I GGTACC 3 cut(s) 999, 2045, 4011
AspLEI GCGC 5 cut(s) 1071, 1538, 1650, 2287, 2459
AsuC2I CCSGG 4 cut(s) 1004, 1454, 4184, 4213
AsuHPI GGTGA 7 cut(s) 257, 2361, 3321, 3467, 3789, 4157, 4259
AvaII GGWCC 7 cut(s) 190, 861, 1218, 1871, 2279, 3665, 3678
AxyI CCTNAGG 2 cut(s) 1718, 3352
BaeGI GKGCMC 2 cut(s) 2260, 3149
BalI TGGCCA 2 cut(s) 111, 3179
BamHI GGATCC 2 cut(s) 519, 1744
BanI GGYRCC 4 cut(s) 999, 1647, 2045, 4011
BanII GRGCYC 1 cut(s) 3149
BarI GAAGNNNNNNTAC 4 cut(s) 592, 624, 2202, 2234
Bbv12I GWGCWC 3 cut(s) 2260, 2920, 3115
BbvCI CCTCAGC 1 cut(s) 2439
BbvI GCAGC 8 cut(s) 262, 266, 910, 1283, 2446, 2633, 3645, 3817
BccI CCATC 9 cut(s) 560, 660, 869, 2985, 3230, 3489, 3817, 3874, 3908
BceAI ACGGC 2 cut(s) 3339, 4107
BcgI CGANNNNNNTGC 4 cut(s) 806, 840, 3782, 3816
BciT130I CCWGG 8 cut(s) 113, 765, 1035, 1742, 1869, 2454, 3435, 3663
BciVI GTATCC 1 cut(s) 2984
BcnI CCSGG 4 cut(s) 1004, 1454, 4184, 4213
BcoDI GTCTC 4 cut(s) 761, 1421, 3583, 3624
BcuI ACTAGT 1 cut(s) 2944
BfaI CTAG 7 cut(s) 1664, 2945, 3150, 3159, 3521, 3696, 4160
BfmI CTRYAG 9 cut(s) 168, 252, 1222, 1269, 1335, 1749, 1960, 2433, 2619
BfoI RGCGCY 4 cut(s) 1072, 1539, 1651, 2460
BfuAI ACCTGC 4 cut(s) 2290, 2416, 3094, 3808
BfuI GTATCC 1 cut(s) 2984
BglII AGATCT 1 cut(s) 3596
BisI GCNGC 8 cut(s) 255, 276, 924, 1272, 2460, 2622, 3634, 3831
BlsI GCNGC 8 cut(s) 256, 277, 925, 1273, 2461, 2623, 3635, 3832
BmcAI AGTACT 4 cut(s) 610, 1828, 2879, 3052
Bme18I GGWCC 7 cut(s) 190, 861, 1218, 1871, 2279, 3665, 3678
BmrI ACTGGG 4 cut(s) 409, 979, 2524, 3773
BmsI GCATC 3 cut(s) 361, 2114, 3325
BmuI ACTGGG 4 cut(s) 409, 979, 2524, 3773
BplI GAGNNNNNCTC 2 cut(s) 2651, 2683
BpmI CTGGAG 2 cut(s) 2061, 3645
Bpu10I CCTNAGC 2 cut(s) 2000, 2439
BpuEI CTTGAG 3 cut(s) 819, 2978, 3613
BpuMI CCSGG 4 cut(s) 1004, 1454, 4184, 4213
BsaHI GRCGYC 1 cut(s) 1648
BsaI GGTCTC 1 cut(s) 3624
BsaXI ACNNNNNCTCC 6 cut(s) 467, 497, 1746, 1776, 1875, 1905
Bse1I ACTGG 9 cut(s) 415, 958, 974, 2519, 2571, 2711, 2914, 3230, 3779
Bse21I CCTNAGG 2 cut(s) 1718, 3352
Bse3DI GCAATG 4 cut(s) 695, 800, 3888, 4194
BseBI CCWGG 8 cut(s) 113, 765, 1035, 1742, 1869, 2454, 3435, 3663
BseGI GGATG 7 cut(s) 13, 571, 1449, 2796, 3098, 3713, 3809
BseMI GCAATG 4 cut(s) 695, 800, 3888, 4194
BseNI ACTGG 9 cut(s) 415, 958, 974, 2519, 2571, 2711, 2914, 3230, 3779
BseRI GAGGAG 5 cut(s) 1081, 2534, 2975, 3534, 3963
BseSI GKGCMC 2 cut(s) 2260, 3149
BseXI GCAGC 8 cut(s) 262, 266, 910, 1283, 2446, 2633, 3645, 3817
BseYI CCCAGC 3 cut(s) 1457, 1622, 1643
BsgI GTGCAG 4 cut(s) 327, 2183, 3039, 3072
Bsh1285I CGRYCG 1 cut(s) 1182
BshNI GGYRCC 4 cut(s) 999, 1647, 2045, 4011
BsiEI CGRYCG 1 cut(s) 1182
BsiHKAI GWGCWC 3 cut(s) 2260, 2920, 3115
BsiSI CCGG 5 cut(s) 927, 1004, 1454, 4184, 4213
BslFI GGGAC 5 cut(s) 1099, 1857, 2292, 3691, 4165
BsmAI GTCTC 4 cut(s) 761, 1421, 3583, 3624
BsmFI GGGAC 5 cut(s) 1099, 1857, 2292, 3691, 4165
Bso31I GGTCTC 1 cut(s) 3624
Bsp120I GGGCCC 1 cut(s) 3145
Bsp1286I GDGCHC 4 cut(s) 2260, 2920, 3115, 3149
Bsp1407I TGTACA 3 cut(s) 1389, 3557, 3904
Bsp19I CCATGG 2 cut(s) 523, 3141
BspACI CCGC 9 cut(s) 223, 359, 398, 509, 1178, 1655, 2377, 3430, 3977
BspHI TCATGA 1 cut(s) 4258
BspMAI CTGCAG 3 cut(s) 256, 1273, 2623
BspMI ACCTGC 4 cut(s) 2290, 2416, 3094, 3808
BspT107I GGYRCC 4 cut(s) 999, 1647, 2045, 4011
BspTNI GGTCTC 1 cut(s) 3624
BsrDI GCAATG 4 cut(s) 695, 800, 3888, 4194
BsrGI TGTACA 3 cut(s) 1389, 3557, 3904
BsrI ACTGG 9 cut(s) 415, 958, 974, 2519, 2571, 2711, 2914, 3230, 3779
BssNI GRCGYC 1 cut(s) 1648
BssT1I CCWWGG 7 cut(s) 523, 1192, 1875, 3103, 3141, 3340, 3763
Bst2UI CCWGG 8 cut(s) 113, 765, 1035, 1742, 1869, 2454, 3435, 3663
Bst6I CTCTTC 1 cut(s) 2851
BstACI GRCGYC 1 cut(s) 1648
BstAPI GCANNNNNTGC 1 cut(s) 920
BstAUI TGTACA 3 cut(s) 1389, 3557, 3904
BstDSI CCRYGG 3 cut(s) 523, 3141, 3718
BstENI CCTNNNNNAGG 2 cut(s) 1752, 2178
BstF5I GGATG 7 cut(s) 13, 571, 1449, 2796, 3098, 3713, 3809
BstH2I RGCGCY 4 cut(s) 1072, 1539, 1651, 2460
BstHHI GCGC 5 cut(s) 1071, 1538, 1650, 2287, 2459
BstMAI GTCTC 4 cut(s) 761, 1421, 3583, 3624
BstMCI CGRYCG 1 cut(s) 1182
BstNI CCWGG 8 cut(s) 113, 765, 1035, 1742, 1869, 2454, 3435, 3663
BstNSI RCATGY 5 cut(s) 1360, 1661, 2842, 3558, 4180
BstSFI CTRYAG 9 cut(s) 168, 252, 1222, 1269, 1335, 1749, 1960, 2433, 2619
BstSLI GKGCMC 2 cut(s) 2260, 3149
BstV1I GCAGC 8 cut(s) 262, 266, 910, 1283, 2446, 2633, 3645, 3817
BstX2I RGATCY 5 cut(s) 34, 410, 519, 1744, 3596
BstXI CCANNNNNNTGG 2 cut(s) 530, 3770
BstYI RGATCY 5 cut(s) 34, 410, 519, 1744, 3596
Bsu36I CCTNAGG 2 cut(s) 1718, 3352
BsuI GTATCC 1 cut(s) 2984
BtgI CCRYGG 3 cut(s) 523, 3141, 3718
BtsCI GGATG 7 cut(s) 13, 571, 1449, 2796, 3098, 3713, 3809
BtsI GCAGTG 2 cut(s) 381, 411
BveI ACCTGC 4 cut(s) 2290, 2416, 3094, 3808
CaiI CAGNNNCTG 2 cut(s) 1766, 2459
CciI TCATGA 1 cut(s) 4258
CfoI GCGC 5 cut(s) 1071, 1538, 1650, 2287, 2459
CseI GACGC 1 cut(s) 788
CspCI CAANNNNNGTGG 2 cut(s) 3748, 3783
DinI GGCGCC 1 cut(s) 1649
DraI TTTAAA 1 cut(s) 1365
DraIII CACNNNGTG 2 cut(s) 2161, 3062
DrdI GACNNNNNNGTC 2 cut(s) 916, 1111
DseDI GACNNNNNNGTC 2 cut(s) 916, 1111
EaeI YGGCCR 2 cut(s) 109, 3177
Eam1104I CTCTTC 1 cut(s) 2851
EarI CTCTTC 1 cut(s) 2851
EciI GGCGGA 2 cut(s) 413, 3966
Eco130I CCWWGG 7 cut(s) 523, 1192, 1875, 3103, 3141, 3340, 3763
Eco24I GRGCYC 1 cut(s) 3149
Eco31I GGTCTC 1 cut(s) 3624
Eco32I GATATC 1 cut(s) 2036
Eco47I GGWCC 7 cut(s) 190, 861, 1218, 1871, 2279, 3665, 3678
Eco57I CTGAAG 7 cut(s) 447, 2160, 2433, 2868, 2943, 3546, 3657
Eco81I CCTNAGG 2 cut(s) 1718, 3352
EcoNI CCTNNNNNAGG 2 cut(s) 1752, 2178
EcoO109I RGGNCCY 8 cut(s) 84, 98, 1218, 1871, 2279, 3073, 3146, 3678
EcoRII CCWGG 8 cut(s) 111, 763, 1033, 1740, 1867, 2452, 3433, 3661
EcoRV GATATC 1 cut(s) 2036
EcoT14I CCWWGG 7 cut(s) 523, 1192, 1875, 3103, 3141, 3340, 3763
EcoT22I ATGCAT 1 cut(s) 3258
EcoT38I GRGCYC 1 cut(s) 3149
EgeI GGCGCC 1 cut(s) 1649
EheI GGCGCC 1 cut(s) 1649
ErhI CCWWGG 7 cut(s) 523, 1192, 1875, 3103, 3141, 3340, 3763
FalI AAGNNNNNCTT 1 cut(s) 4254
FaqI GGGAC 5 cut(s) 1099, 1857, 2292, 3691, 4165
FauI CCCGC 1 cut(s) 3437
FauNDI CATATG 3 cut(s) 1011, 1615, 1732
FblI GTMKAC 2 cut(s) 594, 3750
Fnu4HI GCNGC 8 cut(s) 255, 276, 924, 1272, 2460, 2622, 3634, 3831
FokI GGATG 6 cut(s) 578, 1436, 2783, 3085, 3700, 3796
FriOI GRGCYC 1 cut(s) 3149
Fsp4HI GCNGC 8 cut(s) 255, 276, 924, 1272, 2460, 2622, 3634, 3831
FspBI CTAG 7 cut(s) 1664, 2945, 3150, 3159, 3521, 3696, 4160
GlaI GCGC 5 cut(s) 1070, 1537, 1649, 2286, 2458
GluI GCNGC 8 cut(s) 255, 276, 924, 1272, 2460, 2622, 3634, 3831
GsaI CCCAGC 3 cut(s) 1461, 1626, 1647
GsuI CTGGAG 2 cut(s) 2061, 3645
HaeII RGCGCY 4 cut(s) 1072, 1539, 1651, 2460
HapII CCGG 5 cut(s) 927, 1004, 1454, 4184, 4213
HgaI GACGC 1 cut(s) 788
HhaI GCGC 5 cut(s) 1071, 1538, 1650, 2287, 2459
Hin1I GRCGYC 1 cut(s) 1648
Hin6I GCGC 5 cut(s) 1069, 1536, 1648, 2285, 2457
HinP1I GCGC 5 cut(s) 1069, 1536, 1648, 2285, 2457
HincII GTYRAC 3 cut(s) 1342, 2015, 3751
HindII GTYRAC 3 cut(s) 1342, 2015, 3751
HpaI GTTAAC 1 cut(s) 1342
HpaII CCGG 5 cut(s) 927, 1004, 1454, 4184, 4213
HphI GGTGA 7 cut(s) 257, 2361, 3321, 3467, 3789, 4157, 4259
Hpy99I CGWCG 1 cut(s) 1187
HpyCH4IV ACGT 1 cut(s) 2933
HpySE526I ACGT 1 cut(s) 2933
Hsp92I GRCGYC 1 cut(s) 1648
HspAI GCGC 5 cut(s) 1069, 1536, 1648, 2285, 2457
KasI GGCGCC 1 cut(s) 1647
KflI GGGWCCC 1 cut(s) 3678
KpnI GGTACC 3 cut(s) 1003, 2049, 4015
KspAI GTTAAC 1 cut(s) 1342
LmnI GCTCC 8 cut(s) 458, 840, 1094, 1376, 1624, 2696, 4075, 4115
Lsp1109I GCAGC 8 cut(s) 262, 266, 910, 1283, 2446, 2633, 3645, 3817
LweI GCATC 3 cut(s) 361, 2114, 3325
MaeI CTAG 7 cut(s) 1664, 2945, 3150, 3159, 3521, 3696, 4160
MaeII ACGT 1 cut(s) 2933
MaeIII GTNAC 8 cut(s) 680, 934, 1553, 1666, 3221, 3387, 3795, 4025
MfeI CAATTG 2 cut(s) 1053, 2186
MflI RGATCY 5 cut(s) 34, 410, 519, 1744, 3596
MhlI GDGCHC 4 cut(s) 2260, 2920, 3115, 3149
MlsI TGGCCA 2 cut(s) 111, 3179
MluNI TGGCCA 2 cut(s) 111, 3179
Mly113I GGCGCC 1 cut(s) 1648
MlyI GAGTC 6 cut(s) 356, 392, 461, 2669, 2861, 3803
MmeI TCCRAC 4 cut(s) 405, 1861, 1873, 2833
Mox20I TGGCCA 2 cut(s) 111, 3179
Mph1103I ATGCAT 1 cut(s) 3258
MroXI GAANNNNTTC 3 cut(s) 121, 2860, 3268
MscI TGGCCA 2 cut(s) 111, 3179
MslI CAYNNNNRTG 3 cut(s) 1697, 3120, 4226
Msp20I TGGCCA 2 cut(s) 111, 3179
MspA1I CMGCKG 3 cut(s) 257, 2356, 2438
MspI CCGG 5 cut(s) 927, 1004, 1454, 4184, 4213
MunI CAATTG 2 cut(s) 1053, 2186
MvaI CCWGG 8 cut(s) 113, 765, 1035, 1742, 1869, 2454, 3435, 3663
NarI GGCGCC 1 cut(s) 1648
NciI CCSGG 4 cut(s) 1004, 1454, 4184, 4213
NcoI CCATGG 2 cut(s) 523, 3141
NdeI CATATG 3 cut(s) 1011, 1615, 1732
NmeAIII GCCGAG 1 cut(s) 4224
NmuCI GTSAC 4 cut(s) 934, 3221, 3387, 3795
NsiI ATGCAT 1 cut(s) 3258
NspI RCATGY 5 cut(s) 1360, 1661, 2842, 3558, 4180
PaeI GCATGC 1 cut(s) 1661
PagI TCATGA 1 cut(s) 4258
PaqCI CACCTGC 2 cut(s) 3094, 3808
PciI ACATGT 2 cut(s) 1356, 3554
PcsI WCGNNNNNNNCGW 1 cut(s) 3370
PdmI GAANNNNTTC 3 cut(s) 121, 2860, 3268
PflMI CCANNNNNTGG 2 cut(s) 3284, 4232
PfoI TCCNGGA 2 cut(s) 3661, 4211
PkrI GCNGC 8 cut(s) 256, 277, 925, 1273, 2461, 2623, 3635, 3832
PleI GAGTC 6 cut(s) 355, 391, 460, 2668, 2861, 3802
PluTI GGCGCC 1 cut(s) 1651
PpsI GAGTC 6 cut(s) 355, 391, 460, 2668, 2861, 3802
PpuMI RGGWCCY 4 cut(s) 1218, 1871, 2279, 3678
PscI ACATGT 2 cut(s) 1356, 3554
PshBI ATTAAT 1 cut(s) 3191
Psp5II RGGWCCY 4 cut(s) 1218, 1871, 2279, 3678
Psp6I CCWGG 8 cut(s) 111, 763, 1033, 1740, 1867, 2452, 3433, 3661
PspFI CCCAGC 3 cut(s) 1457, 1622, 1643
PspGI CCWGG 8 cut(s) 111, 763, 1033, 1740, 1867, 2452, 3433, 3661
PspOMI GGGCCC 1 cut(s) 3145
PspPPI RGGWCCY 4 cut(s) 1218, 1871, 2279, 3678
PstI CTGCAG 3 cut(s) 256, 1273, 2623
PstNI CAGNNNCTG 2 cut(s) 1766, 2459
PsuI RGATCY 5 cut(s) 34, 410, 519, 1744, 3596
PvuII CAGCTG 3 cut(s) 257, 2356, 2438
RseI CAYNNNNRTG 3 cut(s) 1697, 3120, 4226
SalI GTCGAC 1 cut(s) 3749
SatI GCNGC 8 cut(s) 255, 276, 924, 1272, 2460, 2622, 3634, 3831
ScaI AGTACT 4 cut(s) 610, 1828, 2879, 3052
SchI GAGTC 6 cut(s) 356, 392, 461, 2669, 2861, 3803
SduI GDGCHC 4 cut(s) 2260, 2920, 3115, 3149
SfaNI GCATC 3 cut(s) 361, 2114, 3325
SfcI CTRYAG 9 cut(s) 168, 252, 1222, 1269, 1335, 1749, 1960, 2433, 2619
SfoI GGCGCC 1 cut(s) 1649
SinI GGWCC 7 cut(s) 190, 861, 1218, 1871, 2279, 3665, 3678
SmiMI CAYNNNNRTG 3 cut(s) 1697, 3120, 4226
SmlI CTYRAG 3 cut(s) 834, 2957, 3592
SmoI CTYRAG 3 cut(s) 834, 2957, 3592
SpeI ACTAGT 1 cut(s) 2944
SphI GCATGC 1 cut(s) 1661
SsiI CCGC 9 cut(s) 223, 359, 398, 509, 1178, 1655, 2377, 3430, 3977
SspDI GGCGCC 1 cut(s) 1647
SspI AATATT 1 cut(s) 2768
SspMI CTAG 7 cut(s) 1664, 2945, 3150, 3159, 3521, 3696, 4160
StyI CCWWGG 7 cut(s) 523, 1192, 1875, 3103, 3141, 3340, 3763
TaiI ACGT 1 cut(s) 2936
TseFI GTSAC 4 cut(s) 934, 3221, 3387, 3795
TseI GCWGC 8 cut(s) 254, 275, 923, 1271, 2459, 2621, 3633, 3830
Tsp45I GTSAC 4 cut(s) 934, 3221, 3387, 3795
TspGWI ACGGA 6 cut(s) 56, 612, 1361, 1716, 2037, 3802
Van91I CCANNNNNTGG 2 cut(s) 3284, 4232
VneI GTGCAC 1 cut(s) 2256
VpaK11BI GGWCC 7 cut(s) 190, 861, 1218, 1871, 2279, 3665, 3678
VspI ATTAAT 1 cut(s) 3191
XagI CCTNNNNNAGG 2 cut(s) 1752, 2178
XapI RAATTY 4 cut(s) 1366, 2524, 2653, 3001
XceI RCATGY 5 cut(s) 1360, 1661, 2842, 3558, 4180
XmiI GTMKAC 2 cut(s) 594, 3750
XmnI GAANNNNTTC 3 cut(s) 121, 2860, 3268
XspI CTAG 7 cut(s) 1664, 2945, 3150, 3159, 3521, 3696, 4160
ZrmI AGTACT 4 cut(s) 610, 1828, 2879, 3052
Zsp2I ATGCAT 1 cut(s) 3258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.