RchiOBHm_Chr7g0203401

Protein transport protein sec16

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0001182
Physical Location & Seq
Reverse (-)
21096964 .. 21101007
4044 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18205

Sequence Viewer

Length: 2454 bp
ATGAGGGAAGTGATTCGGACGACGCCAAGGCGTTGCCAATCTGAGCGTTGTAGCGGCGGATTCCGGTGCGGAAAAGAAAAAGGAGAAGGGGGTGTGGATTTGGATGTTGGAGAGGCGGAGGCGGATGCGGTTGGGGTTGGTAATGTGGTTGAGTCGAGTAATGCGATCAATGGTTCGGCGGAGGGGGCGGTGGAGTCCGGCAATGATGGGGCGGTTGCCGAATTGAAGCCCGATTCGGATTTGGTGGTGAGCAAGAGTAATGATTCCGGGGTTTCGGGGGTTAAGGAGGTGGATTGGGGTTTGTTTTATGCCAATTCGGGTCAGAATGGGATCCATGGATTTGGATCCTACTCGGATTTTTTCAATGAGTTGGGGGATGGCACTGGGGATTTTCCCGCCAAAGTGGAACACAATGTGGTATCCGGCAGTGAAGATTATACAGCCAACAGTTTGACTGCGCAACCAAATGTGATATCCGGCGGTGCAGATTATACAGGCAATGGCTTGAGCAATTCGGTTAATAATAGCCAGCAGTATCAAGAGGTTCAAGCTTATGGAGCCTCTGGGGAAGAAAGCAAAAACGAGCCGGATGTAAACAGTACCGAGTATTGGGACAGTCTGTATCCTGGGTGGAAGTATGGCCCCAACACAGGGCAATGGTACGAGGTGGACAGTTTCGATGGAGCTGCTAATTGGACCACCGTTACTGATACTAAACAGGAGATTTCGTATTTGCAGCAAACAGCTCACTCTGCTGCCGGAACTGTGACTGAAGCTAGCACTACTGGTTGTTTGTCTAGCTGGGAACAGGTCTCACAATGGACTAATGGGTACCCGGAACATATGGTTTTTTATCCTGAACACCCTGATTGGTACTACGACACAATTGCCCAGGAGTGGCGTTCATTGGAAGCATATAATGCTTCTATGCAACCCACGGCCACAACAGCAGCTCAGGCCCAGAATGAGAATAGTTTATATCATGAGTATGGACAAGCTGAAAATTATGGGTCACAAGGTGTTAGTAACCAAGGTCAAGAGGGTAGCTGGTCTCAGTCTTATAATAATTACAATCAGCAAGTTTCAAATATGTGGCAACCTGAGGCTGTAGCTACCAGCGAGTCTTTTCCAAGTTTTGGTGGAAACCAACAGTTGGGTAATTCATTAGCTTCTACGGTTAACAAGGATCAGCAGAAGTTCGGAGCAGTTCCTTTGTATAACAAAGCAAGTCAGGGTCATGGTGAGGCTAATGGGACTGTTGGGTTCCAAAGTTTTGCCCCAGCTGGAAACTTTAACCAGCAGTTTAATCAAGGAAATGCAAAGCAGAATGAACAAACCCAATTTTCAGAGGATTACTATGGCAGTCAGAAACCTGTAAATTATTCACAACAATCTTTCCAGAGTGGCAATCAGTTTACATATGCTCCAACTGTTGGAAGATCTTCTGCCGGGCGTCCTCCACATGCCTTAGTAACTTTTGGATTTGGTGGAAAACTCATTGTGATGAAGGACAGTAGTAGTCTTGGGAACTCTTCCTATGGAAGCCAGGATCCTGTAGCGGGCTCAGTTTCTGTTCTGAACTTGACAGAAGTTTTCATGCAAAAGCCTGATGCTTCAAGTTTTGGAATGACTACTTGTGATTATTTTCGTGCCTTGTGCCAACAGTCCTTTCCAGGGCCGTTGGTTGGAGGGAATGTTGGAAGTAAAGAGTTGAACAAATGGATTGATGAAAGGATTACTTACTGTGAATCACCCGACATGGACTATAGGAAAGGAAAAGTATTGAGGTTACTTATTTCTTTGCTTAAGATAGCTTGTCAACACTATGGAAAACTCCGATCTCCTTTTGGTACCGACACTCTATCCAAGGAAAATGATATTCCAGAATCTGCAGTTGCTAAGCTTTTTGCATCTGCAAAGAGCAATGGTGCACAACTCGGTGAGTATAATGCTCTTAGCCACTGTGTGCAGAACATCCCTTCAGAAGGACAAATACAGGCAACTGCTTCTGAAGTACAAAATCTACTGGTTTCTGGTAGAAAGAAAGAGGCTTTACAATGTGCACAGGCAGGTCAATTGTGGGGGCCGGCGCTTGTTCTTGCTTCACAGCTTGGCGAACAGTTATATGTTGATACTGTTAAGCAGATGGCAGTATGCCAGTTAATTCCAGGATCACCTTTGCGAACATTATGCCTGCTAATTGCAGGCCAACCTGCGGAAGTGTTTTCTGCTGACACTACATCTGAAATCAGTGTTCCTGGTGCTGTTAATATGCCTCAACAGCCTGTGCAGTTTGGTTCAAATACAATGCTTGATGATTGGGAGGAGAATTTAGCTGTGATAACTGCAAACAGAACGAAAGATGATGAACTGGTAATCATTCATCTTGGAGATACCTTGTGGAAGGATAGGAGTGAGATTACTGCAGCACACATCTGCTATTTAATTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sec16 Sec16_C

Protein Analysis

817

Amino Acids

88.16

Weight (kDa)

4.58

Isoelectric Point (pI)

35.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec16 PF12932 488 - 610 5.7e-22 Vesicle coat trafficking protein Sec16 mid-region
TPR_Sec16 PF12931 672 - 817 4.7e-26 Sec16 Sec23-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1062
Acc16I TGCGCA 1 cut(s) 459
Acc36I ACCTGC 2 cut(s) 2060, 2221
Acc65I GGTACC 2 cut(s) 831, 1850
AccB1I GGYRCC 2 cut(s) 831, 1850
AccB7I CCANNNNNTGG 3 cut(s) 1136, 1153, 1433
AclWI GGATC 8 cut(s) 325, 338, 339, 352, 1194, 1544, 1557, 2179
AcoI YGGCCR 1 cut(s) 939
AcsI RAATTY 1 cut(s) 2329
AcuI CTGAAG 3 cut(s) 792, 1965, 2031
AcyI GRCGYC 2 cut(s) 23, 1453
AdeI CACNNNGTG 3 cut(s) 415, 1019, 1966
AfaI GTAC 6 cut(s) 601, 662, 833, 875, 1852, 2016
AflII CTTAAG 1 cut(s) 1805
AgsI TTSAA 7 cut(s) 226, 364, 548, 1086, 1617, 1714, 2301
AjnI CCWGG 6 cut(s) 625, 891, 1545, 1672, 2167, 2257
AjuI GAANNNNNNNTTGG 2 cut(s) 1653, 1685
Alw21I GWGCWC 2 cut(s) 1933, 2065
Alw26I GTCTC 2 cut(s) 817, 1056
Alw44I GTGCAC 2 cut(s) 1929, 2061
AlwI GGATC 8 cut(s) 325, 338, 339, 352, 1194, 1544, 1557, 2179
AlwNI CAGNNNCTG 2 cut(s) 1571, 1889
AoxI GGCC 6 cut(s) 640, 939, 957, 1676, 2084, 2206
ApaLI GTGCAC 2 cut(s) 1929, 2061
ApeKI GCWGC 5 cut(s) 686, 736, 755, 950, 2426
ApoI RAATTY 1 cut(s) 2329
Asp700I GAANNNNTTC 2 cut(s) 12, 1441
Asp718I GGTACC 2 cut(s) 831, 1850
AspLEI GCGC 2 cut(s) 460, 2092
AspS9I GGNCC 5 cut(s) 641, 696, 958, 1676, 2084
AsuC2I CCSGG 3 cut(s) 268, 836, 1450
AsuHPI GGTGA 5 cut(s) 259, 1253, 1743, 1952, 2166
AsuNHI GCTAGC 1 cut(s) 776
AvaII GGWCC 1 cut(s) 696
AxyI CCTNAGG 1 cut(s) 1101
BaeGI GKGCMC 2 cut(s) 1933, 2065
BamHI GGATCC 3 cut(s) 330, 344, 1549
BanI GGYRCC 2 cut(s) 831, 1850
BanII GRGCYC 1 cut(s) 1565
BarI GAAGNNNNNNTAC 2 cut(s) 1977, 2009
Bbv12I GWGCWC 2 cut(s) 1933, 2065
BbvI GCAGC 5 cut(s) 673, 742, 748, 962, 2438
BccI CCATC 4 cut(s) 200, 371, 674, 2140
BceAI ACGGC 2 cut(s) 954, 1663
BcgI CGANNNNNNTGC 6 cut(s) 668, 702, 869, 903, 2172, 2206
BciT130I CCWGG 6 cut(s) 627, 893, 1547, 1674, 2169, 2259
BciVI GTATCC 2 cut(s) 430, 633
BcnI CCSGG 3 cut(s) 268, 836, 1450
BcoDI GTCTC 2 cut(s) 817, 1056
BfaI CTAG 2 cut(s) 777, 798
BfmI CTRYAG 5 cut(s) 1107, 1554, 1765, 1890, 2424
BfoI RGCGCY 1 cut(s) 2093
BfrI CTTAAG 1 cut(s) 1805
BfuAI ACCTGC 2 cut(s) 2060, 2221
BfuI GTATCC 2 cut(s) 430, 633
BglII AGATCT 1 cut(s) 1439
BisI GCNGC 6 cut(s) 55, 687, 737, 756, 951, 2427
BlpI GCTNAGC 1 cut(s) 1899
BlsI GCNGC 6 cut(s) 56, 688, 738, 757, 952, 2428
Bme1390I CCNGG 9 cut(s) 268, 627, 836, 893, 1450, 1547, 1674, 2169, 2259
Bme18I GGWCC 1 cut(s) 696
BmgT120I GGNCC 5 cut(s) 641, 696, 958, 1676, 2084
BmiI GGNNCC 9 cut(s) 332, 346, 559, 643, 833, 1265, 1551, 1852, 2085
BmrFI CCNGG 9 cut(s) 268, 627, 836, 893, 1450, 1547, 1674, 2169, 2259
BmrI ACTGGG 1 cut(s) 393
BmsI GCATC 3 cut(s) 115, 1600, 1919
BmtI GCTAGC 1 cut(s) 780
BmuI ACTGGG 1 cut(s) 393
Bpu10I CCTNAGC 1 cut(s) 954
Bpu1102I GCTNAGC 1 cut(s) 1899
BpuEI CTTGAG 1 cut(s) 526
BpuMI CCSGG 3 cut(s) 268, 836, 1450
BsaBI GATNNNNATC 1 cut(s) 343
BsaHI GRCGYC 2 cut(s) 23, 1453
BsaI GGTCTC 2 cut(s) 817, 1056
BsaJI CCNNGG 9 cut(s) 26, 267, 334, 626, 891, 936, 1030, 1673, 1866
BsaWI WCCGGW 1 cut(s) 63
BsaXI ACNNNNNCTCC 6 cut(s) 713, 743, 1408, 1438, 1680, 1710
Bse118I RCCGGY 1 cut(s) 2086
Bse1I ACTGG 5 cut(s) 388, 790, 2031, 2158, 2376
Bse21I CCTNAGG 1 cut(s) 1101
Bse3DI GCAATG 4 cut(s) 208, 505, 662, 1930
Bse8I GATNNNNATC 1 cut(s) 343
BseBI CCWGG 6 cut(s) 627, 893, 1547, 1674, 2169, 2259
BseDI CCNNGG 9 cut(s) 26, 267, 334, 626, 891, 936, 1030, 1673, 1866
BseGI GGATG 5 cut(s) 109, 130, 382, 595, 1974
BseJI GATNNNNATC 1 cut(s) 343
BseMI GCAATG 4 cut(s) 208, 505, 662, 1930
BseMII CTCAG 5 cut(s) 33, 968, 1067, 1092, 1578
BseNI ACTGG 5 cut(s) 388, 790, 2031, 2158, 2376
BseRI GAGGAG 1 cut(s) 2339
BseSI GKGCMC 2 cut(s) 1933, 2065
BseXI GCAGC 5 cut(s) 673, 742, 748, 962, 2438
BseYI CCCAGC 2 cut(s) 801, 1279
BsgI GTGCAG 3 cut(s) 504, 1988, 2309
BshFI GGCC 6 cut(s) 642, 941, 959, 1678, 2086, 2208
BshNI GGYRCC 2 cut(s) 831, 1850
BsiHKAI GWGCWC 2 cut(s) 1933, 2065
BslFI GGGAC 2 cut(s) 626, 1267
BsmAI GTCTC 2 cut(s) 817, 1056
BsmFI GGGAC 2 cut(s) 626, 1267
BsnI GGCC 6 cut(s) 642, 941, 959, 1678, 2086, 2208
Bso31I GGTCTC 2 cut(s) 817, 1056
Bsp1286I GDGCHC 3 cut(s) 1565, 1933, 2065
Bsp143I GATC 8 cut(s) 165, 330, 344, 1186, 1439, 1549, 1838, 2171
Bsp1720I GCTNAGC 1 cut(s) 1899
Bsp19I CCATGG 1 cut(s) 334
BspANI GGCC 6 cut(s) 642, 941, 959, 1678, 2086, 2208
BspCNI CTCAG 5 cut(s) 34, 967, 1066, 1093, 1577
BspHI TCATGA 1 cut(s) 982
BspLI GGNNCC 9 cut(s) 332, 346, 559, 643, 833, 1265, 1551, 1852, 2085
BspMAI CTGCAG 2 cut(s) 1894, 2428
BspMI ACCTGC 2 cut(s) 2060, 2221
BspOI GCTAGC 1 cut(s) 780
BspPI GGATC 8 cut(s) 325, 338, 339, 352, 1194, 1544, 1557, 2179
BspT107I GGYRCC 2 cut(s) 831, 1850
BspTI CTTAAG 1 cut(s) 1805
BspTNI GGTCTC 2 cut(s) 817, 1056
BsrDI GCAATG 4 cut(s) 208, 505, 662, 1930
BsrFI RCCGGY 1 cut(s) 2086
BsrI ACTGG 5 cut(s) 388, 790, 2031, 2158, 2376
BssAI RCCGGY 1 cut(s) 2086
BssECI CCNNGG 9 cut(s) 26, 267, 334, 626, 891, 936, 1030, 1673, 1866
BssMI GATC 8 cut(s) 165, 330, 344, 1186, 1439, 1549, 1838, 2171
BssNI GRCGYC 2 cut(s) 23, 1453
BssT1I CCWWGG 4 cut(s) 26, 334, 1030, 1866
Bst2UI CCWGG 6 cut(s) 627, 893, 1547, 1674, 2169, 2259
Bst6I CTCTTC 1 cut(s) 1537
BstACI GRCGYC 2 cut(s) 23, 1453
BstAFI CTTAAG 1 cut(s) 1805
BstAPI GCANNNNNTGC 1 cut(s) 920
BstC8I GCNNGC 6 cut(s) 530, 778, 1561, 2088, 2195, 2206
BstDEI CTNAG 8 cut(s) 42, 954, 1053, 1101, 1468, 1564, 1899, 1955
BstDSI CCRYGG 2 cut(s) 334, 936
BstENI CCTNNNNNAGG 1 cut(s) 1983
BstF5I GGATG 5 cut(s) 109, 130, 382, 595, 1974
BstH2I RGCGCY 1 cut(s) 2093
BstHHI GCGC 2 cut(s) 460, 2092
BstKTI GATC 8 cut(s) 168, 333, 347, 1189, 1442, 1552, 1841, 2174
BstMAI GTCTC 2 cut(s) 817, 1056
BstMBI GATC 8 cut(s) 165, 330, 344, 1186, 1439, 1549, 1838, 2171
BstMWI GCNNNNNNNGC 7 cut(s) 185, 557, 752, 920, 947, 956, 2281
BstNI CCWGG 6 cut(s) 627, 893, 1547, 1674, 2169, 2259
BstNSI RCATGY 1 cut(s) 1466
BstSCI CCNGG 9 cut(s) 266, 625, 834, 891, 1448, 1545, 1672, 2167, 2257
BstSFI CTRYAG 5 cut(s) 1107, 1554, 1765, 1890, 2424
BstSLI GKGCMC 2 cut(s) 1933, 2065
BstV1I GCAGC 5 cut(s) 673, 742, 748, 962, 2438
BstX2I RGATCY 4 cut(s) 330, 344, 1439, 1549
BstXI CCANNNNNNTGG 1 cut(s) 341
BstYI RGATCY 4 cut(s) 330, 344, 1439, 1549
Bsu36I CCTNAGG 1 cut(s) 1101
BsuI GTATCC 2 cut(s) 430, 633
BsuRI GGCC 6 cut(s) 642, 941, 959, 1678, 2086, 2208
BtgI CCRYGG 2 cut(s) 334, 936
BtsCI GGATG 5 cut(s) 109, 130, 382, 595, 1974
BtsI GCAGTG 1 cut(s) 433
BtsIMutI CAGTG 4 cut(s) 381, 433, 1960, 2257
BveI ACCTGC 2 cut(s) 2060, 2221
Cac8I GCNNGC 6 cut(s) 530, 778, 1561, 2088, 2195, 2206
CaiI CAGNNNCTG 2 cut(s) 1571, 1889
CciI TCATGA 1 cut(s) 982
CfoI GCGC 2 cut(s) 460, 2092
Cfr10I RCCGGY 1 cut(s) 2086
Cfr13I GGNCC 5 cut(s) 641, 696, 958, 1676, 2084
CseI GACGC 2 cut(s) 31, 1442
Csp6I GTAC 6 cut(s) 600, 661, 832, 874, 1851, 2015
CviAII CATG 6 cut(s) 335, 983, 1238, 1463, 1597, 1759
CviQI GTAC 6 cut(s) 600, 661, 832, 874, 1851, 2015
DdeI CTNAG 8 cut(s) 42, 954, 1053, 1101, 1468, 1564, 1899, 1955
DpnI GATC 8 cut(s) 167, 332, 346, 1188, 1441, 1551, 1840, 2173
DpnII GATC 8 cut(s) 165, 330, 344, 1186, 1439, 1549, 1838, 2171
DraIII CACNNNGTG 3 cut(s) 415, 1019, 1966
EaeI YGGCCR 1 cut(s) 939
Eam1104I CTCTTC 1 cut(s) 1537
EarI CTCTTC 1 cut(s) 1537
EciI GGCGGA 4 cut(s) 72, 131, 137, 194
Eco130I CCWWGG 4 cut(s) 26, 334, 1030, 1866
Eco24I GRGCYC 1 cut(s) 1565
Eco31I GGTCTC 2 cut(s) 817, 1056
Eco32I GATATC 1 cut(s) 474
Eco47I GGWCC 1 cut(s) 696
Eco57I CTGAAG 3 cut(s) 792, 1965, 2031
Eco81I CCTNAGG 1 cut(s) 1101
EcoNI CCTNNNNNAGG 1 cut(s) 1983
EcoRII CCWGG 6 cut(s) 625, 891, 1545, 1672, 2167, 2257
EcoRV GATATC 1 cut(s) 474
EcoT14I CCWWGG 4 cut(s) 26, 334, 1030, 1866
EcoT38I GRGCYC 1 cut(s) 1565
ErhI CCWWGG 4 cut(s) 26, 334, 1030, 1866
FaeI CATG 6 cut(s) 338, 986, 1241, 1466, 1600, 1762
FalI AAGNNNNNCTT 2 cut(s) 1723, 1755
FaqI GGGAC 2 cut(s) 626, 1267
FatI CATG 6 cut(s) 334, 982, 1237, 1462, 1596, 1758
FauI CCCGC 2 cut(s) 403, 1552
FauNDI CATATG 2 cut(s) 843, 1420
Fnu4HI GCNGC 6 cut(s) 55, 687, 737, 756, 951, 2427
FokI GGATG 5 cut(s) 116, 137, 389, 602, 1961
FriOI GRGCYC 1 cut(s) 1565
Fsp4HI GCNGC 6 cut(s) 55, 687, 737, 756, 951, 2427
FspBI CTAG 2 cut(s) 777, 798
FspI TGCGCA 1 cut(s) 459
GlaI GCGC 2 cut(s) 459, 2091
GluI GCNGC 6 cut(s) 55, 687, 737, 756, 951, 2427
GsaI CCCAGC 2 cut(s) 805, 1283
HaeII RGCGCY 1 cut(s) 2093
HaeIII GGCC 6 cut(s) 642, 941, 959, 1678, 2086, 2208
HgaI GACGC 2 cut(s) 31, 1442
HhaI GCGC 2 cut(s) 460, 2092
Hin1I GRCGYC 2 cut(s) 23, 1453
Hin1II CATG 6 cut(s) 338, 986, 1241, 1466, 1600, 1762
Hin6I GCGC 2 cut(s) 458, 2090
HinP1I GCGC 2 cut(s) 458, 2090
HincII GTYRAC 2 cut(s) 1180, 1820
HindII GTYRAC 2 cut(s) 1180, 1820
HindIII AAGCTT 2 cut(s) 549, 1901
HinfI GANTC 9 cut(s) 13, 60, 152, 194, 233, 263, 1121, 1748, 1886
HpaI GTTAAC 1 cut(s) 1180
HphI GGTGA 5 cut(s) 259, 1253, 1743, 1952, 2166
Hpy166II GTNNAC 7 cut(s) 595, 670, 1180, 1416, 1820, 1931, 2063
Hpy188III TCNNGA 6 cut(s) 539, 857, 983, 1037, 1399, 1883
Hpy8I GTNNAC 7 cut(s) 595, 670, 1180, 1416, 1820, 1931, 2063
Hpy99I CGWCG 1 cut(s) 25
HpyAV CCTTC 5 cut(s) 80, 1501, 1979, 1989, 2398
HpyF10VI GCNNNNNNNGC 7 cut(s) 185, 557, 752, 920, 947, 956, 2281
HpyF3I CTNAG 8 cut(s) 42, 954, 1053, 1101, 1468, 1564, 1899, 1955
Hsp92I GRCGYC 2 cut(s) 23, 1453
Hsp92II CATG 6 cut(s) 338, 986, 1241, 1466, 1600, 1762
HspAI GCGC 2 cut(s) 458, 2090
KpnI GGTACC 2 cut(s) 835, 1854
KroI GCCGGC 1 cut(s) 2086
KroNI GCCGGC 1 cut(s) 2088
KspAI GTTAAC 1 cut(s) 1180
Kzo9I GATC 8 cut(s) 165, 330, 344, 1186, 1439, 1549, 1838, 2171
LmnI GCTCC 4 cut(s) 557, 683, 1202, 1429
Lsp1109I GCAGC 5 cut(s) 673, 742, 748, 962, 2438
LweI GCATC 3 cut(s) 115, 1600, 1919
MaeI CTAG 2 cut(s) 777, 798
MaeIII GTNAC 6 cut(s) 703, 766, 1011, 1025, 1471, 1788
MalI GATC 8 cut(s) 167, 332, 346, 1188, 1441, 1551, 1840, 2173
MboI GATC 8 cut(s) 165, 330, 344, 1186, 1439, 1549, 1838, 2171
MboII GAAGA 5 cut(s) 443, 581, 1434, 1449, 1524
MfeI CAATTG 2 cut(s) 885, 2075
MflI RGATCY 4 cut(s) 330, 344, 1439, 1549
MhlI GDGCHC 3 cut(s) 1565, 1933, 2065
MlyI GAGTC 3 cut(s) 161, 203, 1130
MmeI TCCRAC 5 cut(s) 88, 1414, 1451, 1666, 1678
MroNI GCCGGC 1 cut(s) 2086
MroXI GAANNNNTTC 2 cut(s) 12, 1441
MslI CAYNNNNRTG 2 cut(s) 987, 1502
MspA1I CMGCKG 1 cut(s) 1283
MspCI CTTAAG 1 cut(s) 1805
MspR9I CCNGG 9 cut(s) 268, 627, 836, 893, 1450, 1547, 1674, 2169, 2259
MunI CAATTG 2 cut(s) 885, 2075
MvaI CCWGG 6 cut(s) 627, 893, 1547, 1674, 2169, 2259
MwoI GCNNNNNNNGC 7 cut(s) 185, 557, 752, 920, 947, 956, 2281
NaeI GCCGGC 1 cut(s) 2088
NciI CCSGG 3 cut(s) 268, 836, 1450
NcoI CCATGG 1 cut(s) 334
NdeI CATATG 2 cut(s) 843, 1420
NdeII GATC 8 cut(s) 165, 330, 344, 1186, 1439, 1549, 1838, 2171
NgoMIV GCCGGC 1 cut(s) 2086
NheI GCTAGC 1 cut(s) 776
NlaIII CATG 6 cut(s) 338, 986, 1241, 1466, 1600, 1762
NlaIV GGNNCC 9 cut(s) 332, 346, 559, 643, 833, 1265, 1551, 1852, 2085
NmuCI GTSAC 2 cut(s) 766, 1011
NsbI TGCGCA 1 cut(s) 459
NspI RCATGY 1 cut(s) 1466
PagI TCATGA 1 cut(s) 982
PcsI WCGNNNNNNNCGW 1 cut(s) 161
PdiI GCCGGC 1 cut(s) 2088
PdmI GAANNNNTTC 2 cut(s) 12, 1441
PfeI GAWTC 6 cut(s) 13, 60, 233, 263, 1748, 1886
PflMI CCANNNNNTGG 3 cut(s) 1136, 1153, 1433
PfoI TCCNGGA 1 cut(s) 2167
PkrI GCNGC 6 cut(s) 56, 688, 738, 757, 952, 2428
PleI GAGTC 3 cut(s) 160, 202, 1129
PpsI GAGTC 3 cut(s) 160, 202, 1129
PsiI TTATAA 1 cut(s) 1062
Psp6I CCWGG 6 cut(s) 625, 891, 1545, 1672, 2167, 2257
PspFI CCCAGC 2 cut(s) 801, 1279
PspGI CCWGG 6 cut(s) 625, 891, 1545, 1672, 2167, 2257
PspN4I GGNNCC 9 cut(s) 332, 346, 559, 643, 833, 1265, 1551, 1852, 2085
PspPI GGNCC 5 cut(s) 641, 696, 958, 1676, 2084
PstI CTGCAG 2 cut(s) 1894, 2428
PstNI CAGNNNCTG 2 cut(s) 1571, 1889
PsuI RGATCY 4 cut(s) 330, 344, 1439, 1549
PvuII CAGCTG 1 cut(s) 1283
RsaI GTAC 6 cut(s) 601, 662, 833, 875, 1852, 2016
RsaNI GTAC 6 cut(s) 600, 661, 832, 874, 1851, 2015
RseI CAYNNNNRTG 2 cut(s) 987, 1502
SatI GCNGC 6 cut(s) 55, 687, 737, 756, 951, 2427
Sau3AI GATC 8 cut(s) 165, 330, 344, 1186, 1439, 1549, 1838, 2171
Sau96I GGNCC 5 cut(s) 641, 696, 958, 1676, 2084
SchI GAGTC 3 cut(s) 161, 203, 1130
ScrFI CCNGG 9 cut(s) 268, 627, 836, 893, 1450, 1547, 1674, 2169, 2259
SduI GDGCHC 3 cut(s) 1565, 1933, 2065
SfaNI GCATC 3 cut(s) 115, 1600, 1919
SfcI CTRYAG 5 cut(s) 1107, 1554, 1765, 1890, 2424
SinI GGWCC 1 cut(s) 696
SmiMI CAYNNNNRTG 2 cut(s) 987, 1502
SmlI CTYRAG 2 cut(s) 505, 1805
SmoI CTYRAG 2 cut(s) 505, 1805
SspMI CTAG 2 cut(s) 777, 798
StyD4I CCNGG 9 cut(s) 266, 625, 834, 891, 1448, 1545, 1672, 2167, 2257
StyI CCWWGG 4 cut(s) 26, 334, 1030, 1866
TaqI TCGA 2 cut(s) 155, 678
TatI WGTACW 1 cut(s) 2014
TauI GCSGC 1 cut(s) 57
TfiI GAWTC 6 cut(s) 13, 60, 233, 263, 1748, 1886
TscAI CASTG 4 cut(s) 388, 433, 1967, 2257
TseFI GTSAC 2 cut(s) 766, 1011
TseI GCWGC 5 cut(s) 686, 736, 755, 950, 2426
Tsp45I GTSAC 2 cut(s) 766, 1011
TspDTI ATGAA 8 cut(s) 894, 1152, 1344, 1520, 1585, 1743, 2372, 2382
TspRI CASTG 4 cut(s) 388, 433, 1967, 2257
Van91I CCANNNNNTGG 3 cut(s) 1136, 1153, 1433
Vha464I CTTAAG 1 cut(s) 1805
VneI GTGCAC 2 cut(s) 1929, 2061
VpaK11BI GGWCC 1 cut(s) 696
XagI CCTNNNNNAGG 1 cut(s) 1983
XapI RAATTY 1 cut(s) 2329
XceI RCATGY 1 cut(s) 1466
XmnI GAANNNNTTC 2 cut(s) 12, 1441
XspI CTAG 2 cut(s) 777, 798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.