Protein transport protein sec16
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1615 |
| Acc16I | TGCGCA | 1 cut(s) | 2311 |
| Acc36I | ACCTGC | 2 cut(s) | 1615, 3145 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 839, 2887, 3311 |
| AccBSI | CCGCTC | 1 cut(s) | 3010 |
| AccI | GTMKAC | 2 cut(s) | 177, 1860 |
| AciI | CCGC | 8 cut(s) | 186, 473, 509, 1077, 1176, 2744, 3010, 4226 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 9 cut(s) | 593, 625, 763, 934, 2569, 2756, 2830, 3046, 3485 |
| AcuI | CTGAAG | 5 cut(s) | 245, 1164, 2253, 2913, 3210 |
| AcvI | CACGTG | 1 cut(s) | 3737 |
| AflIII | ACRYGT | 2 cut(s) | 2469, 2547 |
| AhlI | ACTAGT | 1 cut(s) | 494 |
| AjiI | CACGTC | 1 cut(s) | 2470 |
| AjnI | CCWGG | 8 cut(s) | 1029, 1806, 1933, 2118, 2453, 3166, 3796, 3910 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1914, 1946 |
| Alw21I | GWGCWC | 3 cut(s) | 1307, 2203, 2965 |
| Alw26I | GTCTC | 5 cut(s) | 2284, 2977, 3216, 4203, 4260 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 695, 1187, 1261, 3650 |
| Ama87I | CYCGRG | 3 cut(s) | 814, 1124, 3322 |
| ApeKI | GCWGC | 8 cut(s) | 1648, 1874, 2211, 2356, 2458, 2666, 3551, 3578 |
| ApoI | RAATTY | 9 cut(s) | 593, 625, 763, 934, 2569, 2756, 2830, 3046, 3485 |
| AseI | ATTAAT | 3 cut(s) | 903, 1830, 3218 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1533, 1552, 3295, 3485 |
| AspLEI | GCGC | 2 cut(s) | 1006, 2312 |
| AsuC2I | CCSGG | 7 cut(s) | 815, 816, 1125, 1126, 3323, 3324, 3671 |
| AsuHPI | GGTGA | 8 cut(s) | 288, 1596, 2375, 2390, 2415, 3485, 3807, 3949 |
| AsuNHI | GCTAGC | 2 cut(s) | 1877, 4142 |
| AvaI | CYCGRG | 3 cut(s) | 814, 1124, 3322 |
| AvaII | GGWCC | 6 cut(s) | 265, 2038, 2333, 3792, 3848, 4223 |
| AxyI | CCTNAGG | 1 cut(s) | 2781 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BamHI | GGATCC | 1 cut(s) | 253 |
| BanII | GRGCYC | 1 cut(s) | 3022 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2256, 2288, 3540, 3572 |
| BbrPI | CACGTG | 1 cut(s) | 3737 |
| BbsI | GAAGAC | 5 cut(s) | 618, 1164, 2726, 3902, 4233 |
| Bbv12I | GWGCWC | 3 cut(s) | 1307, 2203, 2965 |
| BbvI | GCAGC | 8 cut(s) | 1660, 1861, 2198, 2368, 2470, 2653, 3563, 3590 |
| BceAI | ACGGC | 2 cut(s) | 3916, 4092 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2180, 2214, 3629, 3663 |
| BciT130I | CCWGG | 8 cut(s) | 1031, 1808, 1935, 2120, 2455, 3168, 3798, 3912 |
| BciVI | GTATCC | 1 cut(s) | 3193 |
| BclI | TGATCA | 3 cut(s) | 1189, 1312, 2365 |
| BcnI | CCSGG | 7 cut(s) | 815, 816, 1125, 1126, 3323, 3324, 3671 |
| BcoDI | GTCTC | 5 cut(s) | 2284, 2977, 3216, 4203, 4260 |
| BcuI | ACTAGT | 1 cut(s) | 494 |
| BfmI | CTRYAG | 8 cut(s) | 270, 945, 1542, 1704, 1815, 2463, 2487, 3576 |
| BfuAI | ACCTGC | 2 cut(s) | 1615, 3145 |
| BfuI | GTATCC | 1 cut(s) | 3193 |
| BisI | GCNGC | 9 cut(s) | 187, 1649, 1875, 2212, 2357, 2459, 2667, 3552, 3579 |
| BlpI | GCTNAGC | 1 cut(s) | 2160 |
| BlsI | GCNGC | 9 cut(s) | 188, 1650, 1876, 2213, 2358, 2460, 2668, 3553, 3580 |
| BmcAI | AGTACT | 1 cut(s) | 493 |
| Bme18I | GGWCC | 6 cut(s) | 265, 2038, 2333, 3792, 3848, 4223 |
| BmeT110I | CYCGRG | 3 cut(s) | 814, 1124, 3322 |
| BmgBI | CACGTC | 1 cut(s) | 2470 |
| BmrI | ACTGGG | 6 cut(s) | 849, 1111, 1297, 1393, 3442, 3708 |
| BmtI | GCTAGC | 2 cut(s) | 1881, 4146 |
| BmuI | ACTGGG | 6 cut(s) | 849, 1111, 1297, 1393, 3442, 3708 |
| BpiI | GAAGAC | 5 cut(s) | 618, 1164, 2726, 3902, 4233 |
| BpmI | CTGGAG | 3 cut(s) | 470, 3522, 3933 |
| Bpu10I | CCTNAGC | 2 cut(s) | 441, 3681 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2160 |
| BpuEI | CTTGAG | 5 cut(s) | 900, 1134, 2279, 2800, 3742 |
| BpuMI | CCSGG | 7 cut(s) | 815, 816, 1125, 1126, 3323, 3324, 3671 |
| BsaAI | YACGTR | 1 cut(s) | 3737 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2496, 3866 |
| BsaI | GGTCTC | 1 cut(s) | 4203 |
| BsaJI | CCNNGG | 9 cut(s) | 814, 1029, 1030, 1123, 1124, 1575, 3322, 3543, 3796 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 481, 511 |
| Bse118I | RCCGGY | 2 cut(s) | 161, 422 |
| Bse21I | CCTNAGG | 1 cut(s) | 2781 |
| Bse3DI | GCAATG | 5 cut(s) | 196, 324, 851, 2346, 4232 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2496, 3866 |
| BseBI | CCWGG | 8 cut(s) | 1031, 1808, 1935, 2120, 2455, 3168, 3798, 3912 |
| BseDI | CCNNGG | 9 cut(s) | 814, 1029, 1030, 1123, 1124, 1575, 3322, 3543, 3796 |
| BseGI | GGATG | 9 cut(s) | 418, 824, 1537, 2564, 2619, 3338, 3705, 3867, 3976 |
| BseJI | GATNNNNATC | 2 cut(s) | 2496, 3866 |
| BseMI | GCAATG | 5 cut(s) | 196, 324, 851, 2346, 4232 |
| BseXI | GCAGC | 8 cut(s) | 1660, 1861, 2198, 2368, 2470, 2653, 3563, 3590 |
| BseYI | CCCAGC | 3 cut(s) | 569, 3055, 3650 |
| BsgI | GTGCAG | 3 cut(s) | 1080, 2652, 3717 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1307, 2203, 2965 |
| BsiHKCI | CYCGRG | 3 cut(s) | 814, 1124, 3322 |
| BsiSI | CCGG | 6 cut(s) | 162, 423, 815, 1125, 3323, 3671 |
| BslFI | GGGAC | 3 cut(s) | 2051, 3805, 3834 |
| BsmAI | GTCTC | 5 cut(s) | 2284, 2977, 3216, 4203, 4260 |
| BsmBI | CGTCTC | 1 cut(s) | 4260 |
| BsmFI | GGGAC | 3 cut(s) | 2051, 3805, 3834 |
| BsmI | GAATGC | 1 cut(s) | 1069 |
| Bso31I | GGTCTC | 1 cut(s) | 4203 |
| BsoBI | CYCGRG | 3 cut(s) | 814, 1124, 3322 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1307, 2203, 2965, 3022 |
| Bsp1407I | TGTACA | 2 cut(s) | 103, 4048 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2160 |
| BspACI | CCGC | 8 cut(s) | 186, 473, 509, 1077, 1176, 2744, 3010, 4226 |
| BspHI | TCATGA | 5 cut(s) | 223, 1678, 1761, 1897, 4276 |
| BspMAI | CTGCAG | 4 cut(s) | 1546, 1708, 2467, 3580 |
| BspMI | ACCTGC | 2 cut(s) | 1615, 3145 |
| BspOI | GCTAGC | 2 cut(s) | 1881, 4146 |
| BspQI | GCTCTTC | 1 cut(s) | 3000 |
| BspTNI | GGTCTC | 1 cut(s) | 4203 |
| BsrBI | CCGCTC | 1 cut(s) | 3010 |
| BsrDI | GCAATG | 5 cut(s) | 196, 324, 851, 2346, 4232 |
| BsrFI | RCCGGY | 2 cut(s) | 161, 422 |
| BsrGI | TGTACA | 2 cut(s) | 103, 4048 |
| BssAI | RCCGGY | 2 cut(s) | 161, 422 |
| BssECI | CCNNGG | 9 cut(s) | 814, 1029, 1030, 1123, 1124, 1575, 3322, 3543, 3796 |
| BssT1I | CCWWGG | 1 cut(s) | 1575 |
| Bst2UI | CCWGG | 8 cut(s) | 1031, 1808, 1935, 2120, 2455, 3168, 3798, 3912 |
| Bst4CI | ACNGT | 7 cut(s) | 113, 1366, 2730, 2927, 2988, 3901, 4026 |
| Bst6I | CTCTTC | 5 cut(s) | 1476, 2559, 3000, 3361, 3828 |
| BstAUI | TGTACA | 2 cut(s) | 103, 4048 |
| BstBAI | YACGTR | 1 cut(s) | 3737 |
| BstC8I | GCNNGC | 8 cut(s) | 1879, 2077, 2463, 2889, 3122, 3462, 3923, 4144 |
| BstEII | GGTNACC | 1 cut(s) | 3937 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2642 |
| BstF5I | GGATG | 9 cut(s) | 418, 824, 1537, 2564, 2619, 3338, 3705, 3867, 3976 |
| BstHHI | GCGC | 2 cut(s) | 1006, 2312 |
| BstMAI | GTCTC | 5 cut(s) | 2284, 2977, 3216, 4203, 4260 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1003, 1216, 2866, 3548, 4234 |
| BstNI | CCWGG | 8 cut(s) | 1031, 1808, 1935, 2120, 2455, 3168, 3798, 3912 |
| BstNSI | RCATGY | 5 cut(s) | 1421, 1724, 2079, 2551, 2887 |
| BstPI | GGTNACC | 1 cut(s) | 3937 |
| BstSFI | CTRYAG | 8 cut(s) | 270, 945, 1542, 1704, 1815, 2463, 2487, 3576 |
| BstV1I | GCAGC | 8 cut(s) | 1660, 1861, 2198, 2368, 2470, 2653, 3563, 3590 |
| BstV2I | GAAGAC | 5 cut(s) | 618, 1164, 2726, 3902, 4233 |
| BstX2I | RGATCY | 3 cut(s) | 253, 1295, 3443 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 2087, 3032, 3067, 3349 |
| BstYI | RGATCY | 3 cut(s) | 253, 1295, 3443 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2781 |
| BsuI | GTATCC | 1 cut(s) | 3193 |
| BtgZI | GCGATG | 1 cut(s) | 2337 |
| BtrI | CACGTC | 1 cut(s) | 2470 |
| BtsCI | GGATG | 9 cut(s) | 418, 824, 1537, 2564, 2619, 3338, 3705, 3867, 3976 |
| BtsI | GCAGTG | 2 cut(s) | 2661, 3873 |
| BveI | ACCTGC | 2 cut(s) | 1615, 3145 |
| Cac8I | GCNNGC | 8 cut(s) | 1879, 2077, 2463, 2889, 3122, 3462, 3923, 4144 |
| CaiI | CAGNNNCTG | 4 cut(s) | 695, 1187, 1261, 3650 |
| CciI | TCATGA | 5 cut(s) | 223, 1678, 1761, 1897, 4276 |
| CfoI | GCGC | 2 cut(s) | 1006, 2312 |
| Cfr10I | RCCGGY | 2 cut(s) | 161, 422 |
| Cfr9I | CCCGGG | 3 cut(s) | 814, 1124, 3322 |
| CseI | GACGC | 1 cut(s) | 3626 |
| CspCI | CAANNNNNGTGG | 7 cut(s) | 33, 1185, 1220, 3766, 3769, 3801, 3804 |
| DraI | TTTAAA | 2 cut(s) | 2940, 2949 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 5 cut(s) | 1476, 2559, 3000, 3361, 3828 |
| EarI | CTCTTC | 5 cut(s) | 1476, 2559, 3000, 3361, 3828 |
| EciI | GGCGGA | 2 cut(s) | 524, 4215 |
| Eco130I | CCWWGG | 1 cut(s) | 1575 |
| Eco24I | GRGCYC | 1 cut(s) | 3022 |
| Eco31I | GGTCTC | 1 cut(s) | 4203 |
| Eco47I | GGWCC | 6 cut(s) | 265, 2038, 2333, 3792, 3848, 4223 |
| Eco57I | CTGAAG | 5 cut(s) | 245, 1164, 2253, 2913, 3210 |
| Eco72I | CACGTG | 1 cut(s) | 3737 |
| Eco81I | CCTNAGG | 1 cut(s) | 2781 |
| Eco88I | CYCGRG | 3 cut(s) | 814, 1124, 3322 |
| Eco91I | GGTNACC | 1 cut(s) | 3937 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2642 |
| EcoO109I | RGGNCCY | 2 cut(s) | 265, 3792 |
| EcoO65I | GGTNACC | 1 cut(s) | 3937 |
| EcoRI | GAATTC | 1 cut(s) | 934 |
| EcoRII | CCWGG | 8 cut(s) | 1029, 1806, 1933, 2118, 2453, 3166, 3796, 3910 |
| EcoT14I | CCWWGG | 1 cut(s) | 1575 |
| EcoT22I | ATGCAT | 3 cut(s) | 1915, 3340, 4218 |
| EcoT38I | GRGCYC | 1 cut(s) | 3022 |
| ErhI | CCWWGG | 1 cut(s) | 1575 |
| Esp3I | CGTCTC | 1 cut(s) | 4260 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 4272 |
| FaqI | GGGAC | 3 cut(s) | 2051, 3805, 3834 |
| FauI | CCCGC | 1 cut(s) | 1070 |
| FauNDI | CATATG | 5 cut(s) | 1101, 2394, 2675, 2770, 4212 |
| FbaI | TGATCA | 3 cut(s) | 1189, 1312, 2365 |
| FblI | GTMKAC | 2 cut(s) | 177, 1860 |
| Fnu4HI | GCNGC | 9 cut(s) | 187, 1649, 1875, 2212, 2357, 2459, 2667, 3552, 3579 |
| FokI | GGATG | 9 cut(s) | 425, 831, 1524, 2571, 2606, 3325, 3692, 3854, 3983 |
| FriOI | GRGCYC | 1 cut(s) | 3022 |
| Fsp4HI | GCNGC | 9 cut(s) | 187, 1649, 1875, 2212, 2357, 2459, 2667, 3552, 3579 |
| FspAI | RTGCGCAY | 1 cut(s) | 2311 |
| FspI | TGCGCA | 1 cut(s) | 2311 |
| GlaI | GCGC | 2 cut(s) | 1005, 2311 |
| GluI | GCNGC | 9 cut(s) | 187, 1649, 1875, 2212, 2357, 2459, 2667, 3552, 3579 |
| GsaI | CCCAGC | 3 cut(s) | 573, 3059, 3654 |
| GsuI | CTGGAG | 3 cut(s) | 470, 3522, 3933 |
| HapII | CCGG | 6 cut(s) | 162, 423, 815, 1125, 3323, 3671 |
| HgaI | GACGC | 1 cut(s) | 3626 |
| HhaI | GCGC | 2 cut(s) | 1006, 2312 |
| Hin6I | GCGC | 2 cut(s) | 1004, 2310 |
| HinP1I | GCGC | 2 cut(s) | 1004, 2310 |
| HincII | GTYRAC | 1 cut(s) | 1197 |
| HindII | GTYRAC | 1 cut(s) | 1197 |
| HindIII | AAGCTT | 6 cut(s) | 132, 1531, 2162, 2270, 2867, 3802 |
| HpaII | CCGG | 6 cut(s) | 162, 423, 815, 1125, 3323, 3671 |
| HphI | GGTGA | 8 cut(s) | 288, 1596, 2375, 2390, 2415, 3485, 3807, 3949 |
| Hpy166II | GTNNAC | 7 cut(s) | 178, 898, 1197, 1861, 3081, 3352, 3740 |
| Hpy8I | GTNNAC | 7 cut(s) | 178, 898, 1197, 1861, 3081, 3352, 3740 |
| HpyCH4III | ACNGT | 7 cut(s) | 113, 1366, 2730, 2927, 2988, 3901, 4026 |
| HpyCH4IV | ACGT | 4 cut(s) | 2435, 2469, 3736, 3742 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1003, 1216, 2866, 3548, 4234 |
| HpySE526I | ACGT | 4 cut(s) | 2435, 2469, 3736, 3742 |
| HspAI | GCGC | 2 cut(s) | 1004, 2310 |
| KflI | GGGWCCC | 1 cut(s) | 3792 |
| Ksp22I | TGATCA | 3 cut(s) | 1189, 1312, 2365 |
| LguI | GCTCTTC | 1 cut(s) | 3000 |
| LmnI | GCTCC | 7 cut(s) | 451, 1207, 1477, 1579, 3238, 3301, 3928 |
| Lsp1109I | GCAGC | 8 cut(s) | 1660, 1861, 2198, 2368, 2470, 2653, 3563, 3590 |
| MaeII | ACGT | 4 cut(s) | 2435, 2469, 3736, 3742 |
| MbiI | CCGCTC | 1 cut(s) | 3010 |
| MfeI | CAATTG | 3 cut(s) | 1143, 1467, 2324 |
| MflI | RGATCY | 3 cut(s) | 253, 1295, 3443 |
| MhlI | GDGCHC | 4 cut(s) | 1307, 2203, 2965, 3022 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 8 cut(s) | 665, 1178, 1267, 1805, 2156, 2251, 3347, 3418 |
| MmeI | TCCRAC | 7 cut(s) | 222, 231, 837, 1146, 2878, 2887, 3210 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 3 cut(s) | 1915, 3340, 4218 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1533, 1552, 3295, 3485 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1497, 2674 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 2 cut(s) | 186, 2153 |
| MspI | CCGG | 6 cut(s) | 162, 423, 815, 1125, 3323, 3671 |
| MunI | CAATTG | 3 cut(s) | 1143, 1467, 2324 |
| Mva1269I | GAATGC | 1 cut(s) | 1069 |
| MvaI | CCWGG | 8 cut(s) | 1031, 1808, 1935, 2120, 2455, 3168, 3798, 3912 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1003, 1216, 2866, 3548, 4234 |
| NciI | CCSGG | 7 cut(s) | 815, 816, 1125, 1126, 3323, 3324, 3671 |
| NdeI | CATATG | 5 cut(s) | 1101, 2394, 2675, 2770, 4212 |
| NheI | GCTAGC | 2 cut(s) | 1877, 4142 |
| NmeAIII | GCCGAG | 2 cut(s) | 1438, 3568 |
| NmuCI | GTSAC | 5 cut(s) | 294, 664, 1251, 3813, 3937 |
| NsbI | TGCGCA | 1 cut(s) | 2311 |
| NsiI | ATGCAT | 3 cut(s) | 1915, 3340, 4218 |
| NspI | RCATGY | 5 cut(s) | 1421, 1724, 2079, 2551, 2887 |
| PaeI | GCATGC | 1 cut(s) | 2079 |
| PagI | TCATGA | 5 cut(s) | 223, 1678, 1761, 1897, 4276 |
| PaqCI | CACCTGC | 1 cut(s) | 1615 |
| PasI | CCCWGGG | 1 cut(s) | 1030 |
| PciI | ACATGT | 1 cut(s) | 2547 |
| PciSI | GCTCTTC | 1 cut(s) | 3000 |
| PctI | GAATGC | 1 cut(s) | 1069 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1533, 1552, 3295, 3485 |
| PfeI | GAWTC | 8 cut(s) | 245, 308, 724, 1243, 1435, 1449, 1567, 4100 |
| PflFI | GACNNNGTC | 2 cut(s) | 125, 2730 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 839, 2887, 3311 |
| PkrI | GCNGC | 9 cut(s) | 188, 1650, 1876, 2213, 2358, 2460, 2668, 3553, 3580 |
| PleI | GAGTC | 8 cut(s) | 664, 1177, 1266, 1805, 2155, 2250, 3347, 3418 |
| PmaCI | CACGTG | 1 cut(s) | 3737 |
| PmlI | CACGTG | 1 cut(s) | 3737 |
| PpsI | GAGTC | 8 cut(s) | 664, 1177, 1266, 1805, 2155, 2250, 3347, 3418 |
| Ppu21I | YACGTR | 1 cut(s) | 3737 |
| PpuMI | RGGWCCY | 2 cut(s) | 265, 3792 |
| PscI | ACATGT | 1 cut(s) | 2547 |
| PshBI | ATTAAT | 3 cut(s) | 903, 1830, 3218 |
| Psp5II | RGGWCCY | 2 cut(s) | 265, 3792 |
| Psp6I | CCWGG | 8 cut(s) | 1029, 1806, 1933, 2118, 2453, 3166, 3796, 3910 |
| PspCI | CACGTG | 1 cut(s) | 3737 |
| PspEI | GGTNACC | 1 cut(s) | 3937 |
| PspFI | CCCAGC | 3 cut(s) | 569, 3055, 3650 |
| PspGI | CCWGG | 8 cut(s) | 1029, 1806, 1933, 2118, 2453, 3166, 3796, 3910 |
| PspPPI | RGGWCCY | 2 cut(s) | 265, 3792 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1073, 1105 |
| PstI | CTGCAG | 4 cut(s) | 1546, 1708, 2467, 3580 |
| PstNI | CAGNNNCTG | 4 cut(s) | 695, 1187, 1261, 3650 |
| PsuI | RGATCY | 3 cut(s) | 253, 1295, 3443 |
| PsyI | GACNNNGTC | 2 cut(s) | 125, 2730 |
| PvuII | CAGCTG | 1 cut(s) | 2153 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1497, 2674 |
| SapI | GCTCTTC | 1 cut(s) | 3000 |
| SatI | GCNGC | 9 cut(s) | 187, 1649, 1875, 2212, 2357, 2459, 2667, 3552, 3579 |
| SbfI | CCTGCAGG | 1 cut(s) | 1546 |
| ScaI | AGTACT | 1 cut(s) | 493 |
| SchI | GAGTC | 8 cut(s) | 665, 1178, 1267, 1805, 2156, 2251, 3347, 3418 |
| SdaI | CCTGCAGG | 1 cut(s) | 1546 |
| SduI | GDGCHC | 4 cut(s) | 1307, 2203, 2965, 3022 |
| SfcI | CTRYAG | 8 cut(s) | 270, 945, 1542, 1704, 1815, 2463, 2487, 3576 |
| SinI | GGWCC | 6 cut(s) | 265, 2038, 2333, 3792, 3848, 4223 |
| SmaI | CCCGGG | 3 cut(s) | 816, 1126, 3324 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1497, 2674 |
| SmlI | CTYRAG | 5 cut(s) | 915, 1149, 2258, 2815, 3757 |
| SmoI | CTYRAG | 5 cut(s) | 915, 1149, 2258, 2815, 3757 |
| SpeI | ACTAGT | 1 cut(s) | 494 |
| SphI | GCATGC | 1 cut(s) | 2079 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1546 |
| SsiI | CCGC | 8 cut(s) | 186, 473, 509, 1077, 1176, 2744, 3010, 4226 |
| SspI | AATATT | 2 cut(s) | 2084, 2711 |
| StyI | CCWWGG | 1 cut(s) | 1575 |
| TaaI | ACNGT | 7 cut(s) | 113, 1366, 2730, 2927, 2988, 3901, 4026 |
| TaiI | ACGT | 4 cut(s) | 2438, 2472, 3739, 3745 |
| TaqI | TCGA | 3 cut(s) | 2098, 2959, 3639 |
| TatI | WGTACW | 4 cut(s) | 103, 491, 1633, 4048 |
| TauI | GCSGC | 1 cut(s) | 189 |
| TfiI | GAWTC | 8 cut(s) | 245, 308, 724, 1243, 1435, 1449, 1567, 4100 |
| TseFI | GTSAC | 5 cut(s) | 294, 664, 1251, 3813, 3937 |
| TseI | GCWGC | 8 cut(s) | 1648, 1874, 2211, 2356, 2458, 2666, 3551, 3578 |
| Tsp45I | GTSAC | 5 cut(s) | 294, 664, 1251, 3813, 3937 |
| TspMI | CCCGGG | 3 cut(s) | 814, 1124, 3322 |
| Tth111I | GACNNNGTC | 2 cut(s) | 125, 2730 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 839, 2887, 3311 |
| VpaK11BI | GGWCC | 6 cut(s) | 265, 2038, 2333, 3792, 3848, 4223 |
| VspI | ATTAAT | 3 cut(s) | 903, 1830, 3218 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2642 |
| XapI | RAATTY | 9 cut(s) | 593, 625, 763, 934, 2569, 2756, 2830, 3046, 3485 |
| XceI | RCATGY | 5 cut(s) | 1421, 1724, 2079, 2551, 2887 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 3029, 3249 |
| XmaI | CCCGGG | 3 cut(s) | 814, 1124, 3322 |
| XmiI | GTMKAC | 2 cut(s) | 177, 1860 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1533, 1552, 3295, 3485 |
| ZrmI | AGTACT | 1 cut(s) | 493 |
| Zsp2I | ATGCAT | 3 cut(s) | 1915, 3340, 4218 |