RLG00000028612

Protein transport protein sec16

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
25026660 .. 25034407
7748 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028612

Sequence Viewer

Length: 4962 bp
ATGGCAAGTTCTGCGTTTGAGTTGGAGGATCAGACGGATGAGGATTTCTTTGACAAATTGATCGATGATGATGACATTGGTTTTTCTGGGTATGCAAATAGTTCTGTAGGAAAAGCTGAGCTTGATGTGGTTAAAGATGTTTCGAAATTGAGTATTTCGGATGTAGGTGCCGGTGGGAAAACTAGTTCTCAGGTTAATGGTGAGTTGGGTCAGAAGGAAGGGGTTGTGTTGGATCCACAGAAGAACTCTTTGACTGGTGGAGAGAGTGAATCTAGTGCATTGGTGGCCAAAGGGGAGGAAGGTGTGGTGGATGATACAGTGAGTTCGAGTGTTGTATCAGTTGATGATGAATTGGGTATCAGGGATGGGGTTGTGTTAGCTTTGTTGGATCGACACCAGGATCCTATAGTCAGTGAAGCGAGCAAGTCATCAGTACCGGAAAATAGAGATGAGGCAGTGGAGGATAAAGCTAGTAATGAGGGTAGTGCATTGGAGGGTAAAGGGGAGGACAGTCCTGTAGATAATACAGTCAGAAAAAGTGTGGTGTCAGAGGGAACAGGTGTTAAAGTAGTTCAGTGGAGTTCGTTTAACTCAGATCCTTCTGGTGGTAGTGGATTTGGGTCATACTCAGATTTTTTTAGTGAAGTTGGAGATAACTCAGAAGACCCATTTGCAAATTTGGGTAACACAGACCAATCTGGGGTCAAATCTATTGTGTCTAATGGTGTTCTGGAAAGCTCAGTTTCTGCTTTCGGTAATTCTAGCTATGTGCAGCATCAAGAAGACCCATTTGCAAATTTGGGTAATACAGTCCAATTTGGGGCCGAATCTGTTGTGACTAATGGTGTTCTGGAAGATGCTGTTTCTGGTTTTGATACTTTTAGATATGGGCAGCAACCAGAAGACCCATTTGCAGATTTGGGTAATGCAGACCAATTTGGGGCCAAATCTGCTGTGAGTAATGTTGTTCTGGAAAACTCGGGTTCTGGTTTGGGTGCTTCTATCTATGGGAAGCATCAAGAAGATCCATTTGCGAATTTGGGTAATACAGACCAGTCTGGGGCTGAATCTAATGTGAGTAATGGTGTTCTGGAGAACTCAGTTTCTGGTTTGGGTACTTCTAGCTATGGGCAGCATCAAGAAGGTCAATTCTATGGGGCTCCTGAAAATCAAAACTTTGACGGGCAAGAATTAAATAGTAATCAGAATTGGGAAAATCTTTATCCCGGATGGAGGTACGATCCAAATACTGAGCAGTGGTATCCGTTGGAGGGTTATGATGTGAATTCAAATACAAATGCAGAGGTGAACAATAATGCAAATGCTCAGGAGAGTTTTAATGTAAATTCTCAGTCTGCAGATACTGAAGTTTTTTCAGCCCAGAAAGCAGATGCTCCTTATTTGCAGCAAGCAGTGCAGGCTGTTTCTCAAAGCGTGGTTGAGGCATCTGAAACTAGCGCAGTTTCTAACTGGAACCAGTATTCTTATGGGAACACAGAATACCCTGCACATATGGTTTTTGATCCCCAGTACCCCGGTTGGTACTATGACACAAATATCCAAGAATGGAGGCAGTTGGAACCTTCTGTACCTACAGTCTACTATGATCAGCAAAATACGAGTACATGGCATGCTGAGAATGCTGCCAAGAGTGAAACTATTGGTTTTACTGAGAAACAGGAATGGAGACAGTTGCAGCCTTTCACTCCATCTTTTGATCAGTCAACAACAAGTATGGTTCATAATCAGCAATATAACAATACAGATGTTGACAACCATGGATCACAGAGTCCAATCATTCAACAAAGTGTTTTAAACTGGGATGGATCTATGACCGCCTATGATCAGCAAAATACGAGTTTGTGGCATGCTCAGAAAGTTGCCAAGAGTGATACTGTTGGTTTTACTGAGAAACAGCCATACATGGACCAGCAATTTTCAACTGAGCATGCATTTAATTCTGTGAATCAACAAACACGGTTCAATCCTTCAGGATCGATTGCTCTTCATCAAGACTCAAGTCAGGGCAATGATATTAGTAGTGCGATTGGTGGCTTTGAAAGGTTTAATTATGCTGACTTTTCTCAGCCTCAGGATCAAGCCAAGGAGCCAAACCAAGTGATGCATTTCTCACCTGGTAACTTTGGTAGTCAGAAGCCAGTACAATTTTTCCAGCAGCCACTCCAGACTGGAACTCAGTTTTCACACGAAGCCAGAGAGGGGAGGTCATCCGCTGGACGACCTGCACATGCTCTGGTTACTTTTGGATTTGGTGGGAAACTTATAATAATGAAAAATAATAGTTCTTTTCATGCAAACCAGACATATGGAAGCCAGGGCTCTGTAGAAGGTGTCATTAATGTTCTCAATCTGATGGATGTTGTCACGGAGAAAAGTGATGCTGCAGACTTTGGAACTGATGGTTGTGATTATTTCAGCGCCTTGTGCCAGCAATCTTTTCCTGGACCTTTAGTTGGTGGGAATGTCGGAAATAAGGAATTAAACAAATGGATTGATGACAAAATTGCAAATTGTGAAACTTCTCACTTGGATTTCAAGAAAGGGGACCATTTGAGATTGCTTTTCTCTTTACTAAAAATATCTTGGCAATTTTATGGAAAACTTCGATCTCCCTTTGGTACTGATCAAAGATTGAAGGACATTGACAATCCAGAATCAGCTCTTGCTAAACTTTTTGCATCTGCTAAAAGAAGTAACGAGTATGGTGCTCTTACGCGGTGCATGCATAACTTGCCTTCTGAAGCACAAATTCAGGCTACTGCTCTTGAGGTACAAAAGCTTCTTGTCTCTGGTAGGAAGGATGAGGCTTTACAATGCGCACAAGAAGGTCAATTGTGGGGACCAGCACTTGTTATTGCATCCCAACTTGGTGATCAGTTTTATTGTGATACTGTGAAGCATATGGCTGTAAACCAGTTAATAGCAGGATCACCATTGCGGACGTTGTGCTTGTTAATCGCCAGGCAGCCAGCAGATGTGTTTTCCGATGCTACTACAAATAGCAGTTTTCCTAGTTTCACAAATTTATCACAACGGCACGAACAGGTTGGAGCTAATTACATGTTAGATGACTGGGAAGAGAATCTAGCCATCTTAACTGCAAATAGAACACAAGATGATGAGCTTGTTATCATCCATCTTGGAGATTCCTTATGGAAGGATAGGGGACAGATAACTGCTGCACACATATGTTATTTAGTTGCAGAAGCCAACCTTGAGCAATATTCGAACAGTTCAAGACTCTGTCTTATCGGTGCTGATCATTGGAAGTTTCCACGAACATACGCCAGTCCAGAGGCTATTCAGAGGACAGAGCTGTATGAATACTCGAAGGTTGTTGGAAATCCTCAGTTTCTTCTACTACCTTTTCAGCCATATAAGCTTATTTATGCCCACATGCTGGCCGAAGTAGGAAAACTTGCTGATGCTTTGAAATATTGTCAAGCAATTTTGAAGTCTTTGAAAACTGCTCGAGCACCTGAGGTGGACACATGGAGAGAGTTGGTGTCATCTCTGGAGGAGCGGATAAGAGCCCACCAGCAGGGTGGTTATAGCATAAATTTGGCTCCAACCAAGTTGATGGGTAAATTGCGTACATTCATTGATAGTACTGCTCATCGTGTTGTTGGGGGGCTACCTCCACCTATACCGTCAACAGCACCAGGCTTTCCTCAGCTTAATGAACATGCTCATCAACTACCTCCACCTATACCATCAACAGCACCAGGCTTCCCTCAGCTTAATGAACATGCTTATCAACTACCTCCACCTATACCATCAACAGCACCAGGCTTTGCTAAGCTTAATGAACATGCTCATCAACCAGTAAATCCAAATGTACCCAACAGTCAATCGACAATGGTTATGTCTTCATTAATGCCTTCAGCATCAATGGAGCCAATAAGTGAAAGGACTTCTGAGAGCAACCAACTGAATATGCCTAACAGAAGCATTTCAGAGCCAGACTTTGGGAAAAGCCCGAGTAAGGTCGATTCATCCAAGAAAGTGAACTCTAAAACGCAACAGAAGCCATCAGCATCTAGTGGGTCGCGTTTCAGTTTTGGGTCACAGATATTTCAAAAGACTCTAGGACTGGTCATAAAATCCCGGCCAGATAAGCAGGCTAAATTAGGTGAAGCAAATAAATTCTACTATGATGAGAAACTCAAGCGATGGGTCGAAGAAGGTGCTGAACCTCCAGCTGAGGAAGCAGCCTTACCACCACCTCCGCCAACAACTGCAGCTATCCAGAATAGAATGCAAGATTACAACATGAATGATGCACTGAAAACTACTAGTTTTCATGCAGTTGGTGGGCCAGAAATCAAAAGCCCAGCATCTTCCGAGAATTCAGGGGCACCACCCGTTCCCCCCAGTTCAAACCAGTTCTCTGCACGTGGGCGTATGGGTGTTCGCTCAAGGTATGTTGATACATTCAACAAAGGCGGTGCGACCTCAGGAAACTTATTTCAGCCACCATCTCTTCCAGCTGCTAAACCAGGGGGTGGTTCCAATCCCAAGTTTTTCATCCCCTCTCCAGTAACTTCCTATCAGGAAACAGTTCAAACAACTGAAGGAAGCACACAAGAATCTTTTGTGACCAGTAACAATCCTCCAAAATCAGTAGACACATTCTCTACTCCGCCAACCTCAACACCATCGTCAATGACCATGCAACGGTTTCCTAGCATGGATAACATTGTACAAAAGAGAGCAGGAGAATTGGCAAATGGCAGTAGCTTTGTTCCACCTGAATCTCGTCGTGTGGCATCATGGAGTGGAAGCCTTAGTGAAGCAAGCAATCCTTCGGTAAGGAGTGAAATAAAACCAACAGCACTTGGTATGTCCCCATTGTCATATATGCCTAGTTTTTCTCCATCAATGCAGTCTGAAAGAAGCAGTGGTAGTTTGGGGGATGACCTTCATGAAGTTGAACTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1654

Amino Acids

179.75

Weight (kDa)

4.81

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec16 PF12932 750 - 873 3e-20 Vesicle coat trafficking protein Sec16 mid-region
TPR_Sec16 PF12931 931 - 1218 2.4e-55 Sec16 Sec23-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2285
Acc16I TGCGCA 1 cut(s) 2839
Acc36I ACCTGC 1 cut(s) 2251
AccB1I GGYRCC 2 cut(s) 167, 4378
AccB7I CCANNNNNTGG 3 cut(s) 3421, 3989, 4526
AccBSI CCGCTC 1 cut(s) 3544
AccI GTMKAC 2 cut(s) 1599, 4647
AccII CGCG 2 cut(s) 2737, 4072
AciI CCGC 8 cut(s) 1836, 2232, 2737, 2959, 3544, 4250, 4467, 4664
AcoI YGGCCR 3 cut(s) 285, 3423, 4130
AcuI CTGAAG 5 cut(s) 1386, 1974, 2781, 3888, 4614
AcvI CACGTG 1 cut(s) 4418
AflIII ACRYGT 1 cut(s) 3081
AhlI ACTAGT 2 cut(s) 182, 4316
AjnI CCWGG 9 cut(s) 396, 2134, 2334, 2461, 2981, 3682, 3745, 3808, 4519
AloI GAACNNNNNNTCC 2 cut(s) 169, 201
Alw21I GWGCWC 2 cut(s) 2731, 3499
Alw26I GTCTC 2 cut(s) 1681, 2812
AlwNI CAGNNNCTG 3 cut(s) 746, 1106, 1364
Ama87I CYCGRG 3 cut(s) 979, 3492, 4000
AoxI GGCC 6 cut(s) 285, 822, 942, 3423, 4130, 4337
AseI ATTAAT 2 cut(s) 2358, 3896
Asp700I GAANNNNTTC 2 cut(s) 3973, 4581
AspLEI GCGC 3 cut(s) 1460, 2441, 2840
AspS9I GGNCC 7 cut(s) 822, 942, 1927, 2465, 2566, 2861, 4337
AsuC2I CCSGG 3 cut(s) 1227, 1536, 4129
AsuHPI GGTGA 6 cut(s) 212, 1318, 2124, 2903, 2943, 4166
AsuII TTCGAA 2 cut(s) 143, 3248
AvaI CYCGRG 3 cut(s) 979, 3492, 4000
AvaII GGWCC 4 cut(s) 1927, 2465, 2566, 2861
AxyI CCTNAGG 3 cut(s) 2091, 3501, 4477
BaeGI GKGCMC 1 cut(s) 4381
BaeI ACNNNNGTAYC 2 cut(s) 1353, 1386
BalI TGGCCA 1 cut(s) 287
BamHI GGATCC 2 cut(s) 232, 400
BanI GGYRCC 2 cut(s) 167, 4378
BanII GRGCYC 3 cut(s) 1162, 2342, 3556
BarI GAAGNNNNNNTAC 4 cut(s) 2784, 2816, 4221, 4253
BbrPI CACGTG 1 cut(s) 4418
BbsI GAAGAC 4 cut(s) 669, 789, 909, 3882
Bbv12I GWGCWC 2 cut(s) 2731, 3499
BbvCI CCTCAGC 3 cut(s) 3693, 3756, 4224
BceAI ACGGC 1 cut(s) 3071
BcgI CGANNNNNNTGC 4 cut(s) 2708, 2742, 4190, 4224
BciT130I CCWGG 9 cut(s) 398, 2136, 2336, 2463, 2983, 3684, 3747, 3810, 4521
BciVI GTATCC 1 cut(s) 1272
BclI TGATCA 6 cut(s) 1606, 1717, 1843, 2644, 2893, 3280
BcnI CCSGG 3 cut(s) 1227, 1536, 4129
BcoDI GTCTC 2 cut(s) 1681, 2812
BcuI ACTAGT 2 cut(s) 182, 4316
BfmI CTRYAG 8 cut(s) 105, 405, 516, 1356, 1593, 2343, 2403, 4260
BfoI RGCGCY 1 cut(s) 2442
BfuAI ACCTGC 1 cut(s) 2251
BfuI GTATCC 1 cut(s) 1272
BlpI GCTNAGC 2 cut(s) 117, 3819
BmcAI AGTACT 1 cut(s) 3631
Bme18I GGWCC 4 cut(s) 1927, 2465, 2566, 2861
BmeT110I CYCGRG 3 cut(s) 979, 3492, 4000
BmgT120I GGNCC 7 cut(s) 822, 942, 1927, 2465, 2566, 2861, 4337
BmrI ACTGGG 4 cut(s) 1522, 1828, 3103, 4389
BmuI ACTGGG 4 cut(s) 1522, 1828, 3103, 4389
BoxI GACNNNNGTC 1 cut(s) 2019
BpiI GAAGAC 4 cut(s) 669, 789, 909, 3882
BpmI CTGGAG 5 cut(s) 1112, 2168, 3557, 4203, 4542
Bpu10I CCTNAGC 4 cut(s) 1326, 3693, 3756, 4224
Bpu1102I GCTNAGC 2 cut(s) 117, 3819
Bpu14I TTCGAA 2 cut(s) 143, 3248
BpuEI CTTGAG 5 cut(s) 2002, 2807, 3257, 4172, 4423
BpuMI CCSGG 3 cut(s) 1227, 1536, 4129
Bsa29I ATCGAT 2 cut(s) 63, 1997
BsaAI YACGTR 1 cut(s) 4418
BsaJI CCNNGG 5 cut(s) 1534, 1777, 2103, 2335, 4520
BsaWI WCCGGW 1 cut(s) 436
Bse118I RCCGGY 1 cut(s) 170
Bse21I CCTNAGG 3 cut(s) 2091, 3501, 4477
Bse3DI GCAATG 2 cut(s) 2035, 2954
BseBI CCWGG 9 cut(s) 398, 2136, 2336, 2463, 2983, 3684, 3747, 3810, 4521
BseCI ATCGAT 2 cut(s) 63, 1997
BseDI CCNNGG 5 cut(s) 1534, 1777, 2103, 2335, 4520
BseMI GCAATG 2 cut(s) 2035, 2954
BseRI GAGGAG 1 cut(s) 3554
BseSI GKGCMC 1 cut(s) 4381
BseYI CCCAGC 1 cut(s) 4354
BsgI GTGCAG 6 cut(s) 791, 1436, 1491, 2229, 3186, 4398
Bsh1236I CGCG 2 cut(s) 2737, 4072
BshFI GGCC 6 cut(s) 287, 824, 944, 3425, 4132, 4339
BshNI GGYRCC 2 cut(s) 167, 4378
BshVI ATCGAT 2 cut(s) 63, 1997
BsiHKAI GWGCWC 2 cut(s) 2731, 3499
BsiHKCI CYCGRG 3 cut(s) 979, 3492, 4000
BsiSI CCGG 5 cut(s) 171, 437, 1227, 1536, 4129
BslFI GGGAC 4 cut(s) 2579, 2874, 3201, 4852
BsmAI GTCTC 2 cut(s) 1681, 2812
BsmFI GGGAC 4 cut(s) 2579, 2874, 3201, 4852
BsmI GAATGC 2 cut(s) 1645, 4284
BsnI GGCC 6 cut(s) 287, 824, 944, 3425, 4132, 4339
BsoBI CYCGRG 3 cut(s) 979, 3492, 4000
Bsp119I TTCGAA 2 cut(s) 143, 3248
Bsp1286I GDGCHC 6 cut(s) 1162, 2342, 2731, 3499, 3556, 4381
Bsp1407I TGTACA 1 cut(s) 4723
Bsp1720I GCTNAGC 2 cut(s) 117, 3819
Bsp19I CCATGG 1 cut(s) 1777
BspACI CCGC 8 cut(s) 1836, 2232, 2737, 2959, 3544, 4250, 4467, 4664
BspANI GGCC 6 cut(s) 287, 824, 944, 3425, 4132, 4339
BspDI ATCGAT 2 cut(s) 63, 1997
BspFNI CGCG 2 cut(s) 2737, 4072
BspHI TCATGA 1 cut(s) 4945
BspMAI CTGCAG 3 cut(s) 1360, 2407, 4264
BspMI ACCTGC 1 cut(s) 2251
BspQI GCTCTTC 1 cut(s) 2010
BspT104I TTCGAA 2 cut(s) 143, 3248
BspT107I GGYRCC 2 cut(s) 167, 4378
BsrBI CCGCTC 1 cut(s) 3544
BsrDI GCAATG 2 cut(s) 2035, 2954
BsrFI RCCGGY 1 cut(s) 170
BsrGI TGTACA 1 cut(s) 4723
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 5 cut(s) 1534, 1777, 2103, 2335, 4520
BssT1I CCWWGG 2 cut(s) 1777, 2103
Bst2UI CCWGG 9 cut(s) 398, 2136, 2336, 2463, 2983, 3684, 3747, 3810, 4521
Bst6I CTCTTC 3 cut(s) 2010, 3093, 4509
BstAPI GCANNNNNTGC 3 cut(s) 11, 1414, 2752
BstAUI TGTACA 1 cut(s) 4723
BstBAI YACGTR 1 cut(s) 4418
BstBI TTCGAA 2 cut(s) 143, 3248
BstDSI CCRYGG 1 cut(s) 1777
BstFNI CGCG 2 cut(s) 2737, 4072
BstH2I RGCGCY 1 cut(s) 2442
BstHHI GCGC 3 cut(s) 1460, 2441, 2840
BstMAI GTCTC 2 cut(s) 1681, 2812
BstNI CCWGG 9 cut(s) 398, 2136, 2336, 2463, 2983, 3684, 3747, 3810, 4521
BstPAI GACNNNNGTC 1 cut(s) 2019
BstSFI CTRYAG 8 cut(s) 105, 405, 516, 1356, 1593, 2343, 2403, 4260
BstSLI GKGCMC 1 cut(s) 4381
BstUI CGCG 2 cut(s) 2737, 4072
BstV2I GAAGAC 4 cut(s) 669, 789, 909, 3882
BstX2I RGATCY 5 cut(s) 232, 400, 595, 1024, 1826
BstXI CCANNNNNNTGG 3 cut(s) 2327, 3566, 3601
BstYI RGATCY 5 cut(s) 232, 400, 595, 1024, 1826
Bsu15I ATCGAT 2 cut(s) 63, 1997
Bsu36I CCTNAGG 3 cut(s) 2091, 3501, 4477
BsuI GTATCC 1 cut(s) 1272
BsuRI GGCC 6 cut(s) 287, 824, 944, 3425, 4132, 4339
BsuTUI ATCGAT 2 cut(s) 63, 1997
BtgI CCRYGG 1 cut(s) 1777
BtgZI GCGATG 1 cut(s) 4207
BtsI GCAGTG 4 cut(s) 462, 1262, 1419, 4927
BtsIMutI CAGTG 8 cut(s) 324, 418, 462, 581, 1262, 1419, 4304, 4927
BveI ACCTGC 1 cut(s) 2251
CaiI CAGNNNCTG 3 cut(s) 746, 1106, 1364
CciI TCATGA 1 cut(s) 4945
CfoI GCGC 3 cut(s) 1460, 2441, 2840
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 7 cut(s) 822, 942, 1927, 2465, 2566, 2861, 4337
ClaI ATCGAT 2 cut(s) 63, 1997
CsiI ACCWGGT 1 cut(s) 2134
DraI TTTAAA 1 cut(s) 1815
EaeI YGGCCR 3 cut(s) 285, 3423, 4130
Eam1104I CTCTTC 3 cut(s) 2010, 3093, 4509
EarI CTCTTC 3 cut(s) 2010, 3093, 4509
EciI GGCGGA 2 cut(s) 4239, 4653
Eco130I CCWWGG 2 cut(s) 1777, 2103
Eco24I GRGCYC 3 cut(s) 1162, 2342, 3556
Eco47I GGWCC 4 cut(s) 1927, 2465, 2566, 2861
Eco57I CTGAAG 5 cut(s) 1386, 1974, 2781, 3888, 4614
Eco72I CACGTG 1 cut(s) 4418
Eco81I CCTNAGG 3 cut(s) 2091, 3501, 4477
Eco88I CYCGRG 3 cut(s) 979, 3492, 4000
EcoRI GAATTC 2 cut(s) 1285, 4369
EcoRII CCWGG 9 cut(s) 396, 2134, 2334, 2461, 2981, 3682, 3745, 3808, 4519
EcoT14I CCWWGG 2 cut(s) 1777, 2103
EcoT22I ATGCAT 3 cut(s) 1954, 2127, 2748
EcoT38I GRGCYC 3 cut(s) 1162, 2342, 3556
ErhI CCWWGG 2 cut(s) 1777, 2103
FalI AAGNNNNNCTT 6 cut(s) 105, 137, 3219, 3251, 4810, 4842
FaqI GGGAC 4 cut(s) 2579, 2874, 3201, 4852
FauNDI CATATG 4 cut(s) 1512, 2326, 2922, 3209
FbaI TGATCA 6 cut(s) 1606, 1717, 1843, 2644, 2893, 3280
FblI GTMKAC 2 cut(s) 1599, 4647
FriOI GRGCYC 3 cut(s) 1162, 2342, 3556
FspAI RTGCGCAY 1 cut(s) 2839
FspI TGCGCA 1 cut(s) 2839
GlaI GCGC 3 cut(s) 1459, 2440, 2839
GsaI CCCAGC 1 cut(s) 4358
GsuI CTGGAG 5 cut(s) 1112, 2168, 3557, 4203, 4542
HaeII RGCGCY 1 cut(s) 2442
HaeIII GGCC 6 cut(s) 287, 824, 944, 3425, 4132, 4339
HapII CCGG 5 cut(s) 171, 437, 1227, 1536, 4129
HhaI GCGC 3 cut(s) 1460, 2441, 2840
Hin6I GCGC 3 cut(s) 1458, 2439, 2838
HinP1I GCGC 3 cut(s) 1458, 2439, 2838
HincII GTYRAC 3 cut(s) 1725, 1771, 3675
HindII GTYRAC 3 cut(s) 1725, 1771, 3675
HindIII AAGCTT 3 cut(s) 2798, 3401, 3821
HpaII CCGG 5 cut(s) 171, 437, 1227, 1536, 4129
HphI GGTGA 6 cut(s) 212, 1318, 2124, 2903, 2943, 4166
Hpy166II GTNNAC 9 cut(s) 1309, 1600, 1725, 1771, 2932, 3508, 3675, 4030, 4648
Hpy8I GTNNAC 9 cut(s) 1309, 1600, 1725, 1771, 2932, 3508, 3675, 4030, 4648
Hpy99I CGWCG 1 cut(s) 4785
HpyCH4IV ACGT 2 cut(s) 2963, 4417
HpySE526I ACGT 2 cut(s) 2963, 4417
HspAI GCGC 3 cut(s) 1458, 2439, 2838
Ksp22I TGATCA 6 cut(s) 1606, 1717, 1843, 2644, 2893, 3280
LguI GCTCTTC 1 cut(s) 2010
LmnI GCTCC 7 cut(s) 1165, 1399, 2107, 3071, 3541, 3592, 3916
MabI ACCWGGT 1 cut(s) 2134
MaeII ACGT 2 cut(s) 2963, 4417
MbiI CCGCTC 1 cut(s) 3544
MfeI CAATTG 1 cut(s) 2852
MflI RGATCY 5 cut(s) 232, 400, 595, 1024, 1826
MhlI GDGCHC 6 cut(s) 1162, 2342, 2731, 3499, 3556, 4381
MlsI TGGCCA 1 cut(s) 287
MluNI TGGCCA 1 cut(s) 287
MlyI GAGTC 4 cut(s) 1798, 2009, 3255, 4099
MmeI TCCRAC 9 cut(s) 210, 366, 628, 1248, 1557, 2467, 3049, 3340, 3614
Mox20I TGGCCA 1 cut(s) 287
Mph1103I ATGCAT 3 cut(s) 1954, 2127, 2748
MroXI GAANNNNTTC 2 cut(s) 3973, 4581
MscI TGGCCA 1 cut(s) 287
MslI CAYNNNNRTG 1 cut(s) 3208
Msp20I TGGCCA 1 cut(s) 287
MspA1I CMGCKG 3 cut(s) 2234, 4223, 4511
MspI CCGG 5 cut(s) 171, 437, 1227, 1536, 4129
MunI CAATTG 1 cut(s) 2852
Mva1269I GAATGC 2 cut(s) 1645, 4284
MvaI CCWGG 9 cut(s) 398, 2136, 2336, 2463, 2983, 3684, 3747, 3810, 4521
MvnI CGCG 2 cut(s) 2737, 4072
NciI CCSGG 3 cut(s) 1227, 1536, 4129
NcoI CCATGG 1 cut(s) 1777
NdeI CATATG 4 cut(s) 1512, 2326, 2922, 3209
NmuCI GTSAC 4 cut(s) 835, 2383, 4086, 4618
NsbI TGCGCA 1 cut(s) 2839
NsiI ATGCAT 3 cut(s) 1954, 2127, 2748
NspV TTCGAA 2 cut(s) 143, 3248
PaeI GCATGC 4 cut(s) 1634, 1871, 1952, 2746
PaeR7I CTCGAG 1 cut(s) 3492
PagI TCATGA 1 cut(s) 4945
PciI ACATGT 1 cut(s) 3081
PciSI GCTCTTC 1 cut(s) 2010
PctI GAATGC 2 cut(s) 1645, 4284
PdmI GAANNNNTTC 2 cut(s) 3973, 4581
PflFI GACNNNGTC 1 cut(s) 3264
PflMI CCANNNNNTGG 3 cut(s) 3421, 3989, 4526
PfoI TCCNGGA 2 cut(s) 1225, 2461
PleI GAGTC 4 cut(s) 1797, 2009, 3255, 4099
PmaCI CACGTG 1 cut(s) 4418
PmlI CACGTG 1 cut(s) 4418
PpsI GAGTC 4 cut(s) 1797, 2009, 3255, 4099
Ppu21I YACGTR 1 cut(s) 4418
PscI ACATGT 1 cut(s) 3081
PshAI GACNNNNGTC 1 cut(s) 2019
PshBI ATTAAT 2 cut(s) 2358, 3896
PsiI TTATAA 1 cut(s) 2285
Psp6I CCWGG 9 cut(s) 396, 2134, 2334, 2461, 2981, 3682, 3745, 3808, 4519
PspCI CACGTG 1 cut(s) 4418
PspFI CCCAGC 1 cut(s) 4354
PspGI CCWGG 9 cut(s) 396, 2134, 2334, 2461, 2981, 3682, 3745, 3808, 4519
PspPI GGNCC 7 cut(s) 822, 942, 1927, 2465, 2566, 2861, 4337
PspXI VCTCGAGB 1 cut(s) 3492
PsrI GAACNNNNNNTAC 4 cut(s) 1484, 1516, 1572, 1604
PstI CTGCAG 3 cut(s) 1360, 2407, 4264
PstNI CAGNNNCTG 3 cut(s) 746, 1106, 1364
PsuI RGATCY 5 cut(s) 232, 400, 595, 1024, 1826
PsyI GACNNNGTC 1 cut(s) 3264
PvuII CAGCTG 2 cut(s) 4223, 4511
RseI CAYNNNNRTG 1 cut(s) 3208
SapI GCTCTTC 1 cut(s) 2010
Sau96I GGNCC 7 cut(s) 822, 942, 1927, 2465, 2566, 2861, 4337
ScaI AGTACT 1 cut(s) 3631
SchI GAGTC 4 cut(s) 1798, 2009, 3255, 4099
SduI GDGCHC 6 cut(s) 1162, 2342, 2731, 3499, 3556, 4381
SexAI ACCWGGT 1 cut(s) 2134
SfcI CTRYAG 8 cut(s) 105, 405, 516, 1356, 1593, 2343, 2403, 4260
Sfr274I CTCGAG 1 cut(s) 3492
SfuI TTCGAA 2 cut(s) 143, 3248
SinI GGWCC 4 cut(s) 1927, 2465, 2566, 2861
SlaI CTCGAG 1 cut(s) 3492
SmiMI CAYNNNNRTG 1 cut(s) 3208
SmlI CTYRAG 6 cut(s) 2017, 2786, 3236, 3492, 4187, 4438
SmoI CTYRAG 6 cut(s) 2017, 2786, 3236, 3492, 4187, 4438
SpeI ACTAGT 2 cut(s) 182, 4316
SphI GCATGC 4 cut(s) 1634, 1871, 1952, 2746
SsiI CCGC 8 cut(s) 1836, 2232, 2737, 2959, 3544, 4250, 4467, 4664
SspI AATATT 2 cut(s) 3245, 3458
StyI CCWWGG 2 cut(s) 1777, 2103
TaiI ACGT 2 cut(s) 2966, 4420
TatI WGTACW 4 cut(s) 1622, 2161, 3629, 4723
TscAI CASTG 8 cut(s) 324, 418, 462, 581, 1262, 1419, 4311, 4927
TseFI GTSAC 4 cut(s) 835, 2383, 4086, 4618
Tsp45I GTSAC 4 cut(s) 835, 2383, 4086, 4618
TspGWI ACGGA 3 cut(s) 50, 1254, 2402
TspRI CASTG 8 cut(s) 324, 418, 462, 581, 1262, 1419, 4311, 4927
Tth111I GACNNNGTC 1 cut(s) 3264
Van91I CCANNNNNTGG 3 cut(s) 3421, 3989, 4526
VpaK11BI GGWCC 4 cut(s) 1927, 2465, 2566, 2861
VspI ATTAAT 2 cut(s) 2358, 3896
XcmI CCANNNNNNNNNTGG 2 cut(s) 1484, 3563
XhoI CTCGAG 1 cut(s) 3492
XmiI GTMKAC 2 cut(s) 1599, 4647
XmnI GAANNNNTTC 2 cut(s) 3973, 4581
ZrmI AGTACT 1 cut(s) 3631
Zsp2I ATGCAT 3 cut(s) 1954, 2127, 2748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.