Protein transport protein sec16
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1023 |
| AarI | CACCTGC | 1 cut(s) | 2821 |
| Acc16I | TGCGCA | 1 cut(s) | 420 |
| Acc36I | ACCTGC | 3 cut(s) | 2146, 2821, 3256 |
| Acc65I | GGTACC | 3 cut(s) | 792, 1961, 3723 |
| AccB1I | GGYRCC | 5 cut(s) | 41, 185, 792, 1961, 3723 |
| AccB7I | CCANNNNNTGG | 7 cut(s) | 1097, 1114, 1394, 2999, 3601, 3751, 3962 |
| AclWI | GGATC | 9 cut(s) | 286, 299, 300, 1155, 1655, 1668, 2705, 3450, 3647 |
| AcoI | YGGCCR | 2 cut(s) | 900, 1580 |
| AcsI | RAATTY | 2 cut(s) | 2254, 2383 |
| AcuI | CTGAAG | 6 cut(s) | 753, 2076, 2598, 2673, 3261, 3375 |
| AcyI | GRCGYC | 1 cut(s) | 1414 |
| AdeI | CACNNNGTG | 3 cut(s) | 376, 980, 2077 |
| AfaI | GTAC | 9 cut(s) | 562, 623, 794, 836, 1963, 2609, 3367, 3624, 3725 |
| AflII | CTTAAG | 3 cut(s) | 301, 1916, 3307 |
| AflIII | ACRYGT | 1 cut(s) | 3619 |
| AjnI | CCWGG | 8 cut(s) | 586, 852, 1240, 1783, 2182, 3145, 3379, 3668 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1764, 1796, 2823, 2855 |
| AleI | CACNNNNGTG | 1 cut(s) | 3578 |
| Alw21I | GWGCWC | 4 cut(s) | 2044, 2511, 2650, 3842 |
| Alw26I | GTCTC | 4 cut(s) | 778, 2688, 3105, 3130 |
| Alw44I | GTGCAC | 1 cut(s) | 2040 |
| AlwI | GGATC | 9 cut(s) | 286, 299, 300, 1155, 1655, 1668, 2705, 3450, 3647 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1682, 2405 |
| AoxI | GGCC | 8 cut(s) | 900, 918, 1580, 2469, 3033, 3124, 3352, 3923 |
| ApaI | GGGCCC | 1 cut(s) | 3356 |
| ApaLI | GTGCAC | 1 cut(s) | 2040 |
| ApoI | RAATTY | 2 cut(s) | 2254, 2383 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2375, 2407 |
| AseI | ATTAAT | 1 cut(s) | 1614 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1402, 2590, 2983 |
| Asp718I | GGTACC | 3 cut(s) | 792, 1961, 3723 |
| AspLEI | GCGC | 2 cut(s) | 421, 3955 |
| AsuC2I | CCSGG | 2 cut(s) | 797, 1411 |
| AsuNHI | GCTAGC | 2 cut(s) | 737, 2459 |
| AvaII | GGWCC | 7 cut(s) | 657, 1544, 2870, 3336, 3383, 3776, 3794 |
| AxyI | CCTNAGG | 2 cut(s) | 1062, 3061 |
| BaeGI | GKGCMC | 2 cut(s) | 2044, 3356 |
| BamHI | GGATCC | 2 cut(s) | 291, 1660 |
| BanI | GGYRCC | 5 cut(s) | 41, 185, 792, 1961, 3723 |
| BanII | GRGCYC | 3 cut(s) | 1676, 3356, 3842 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2088, 2120 |
| BauI | CACGAG | 1 cut(s) | 3435 |
| BbsI | GAAGAC | 2 cut(s) | 399, 3271 |
| Bbv12I | GWGCWC | 4 cut(s) | 2044, 2511, 2650, 3842 |
| BccI | CCATC | 9 cut(s) | 170, 332, 635, 2793, 2827, 2929, 3038, 3204, 3535 |
| BceAI | ACGGC | 4 cut(s) | 45, 915, 924, 3837 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 629, 663, 830, 864, 2762, 2796 |
| BciT130I | CCWGG | 8 cut(s) | 588, 854, 1242, 1785, 2184, 3147, 3381, 3670 |
| BciVI | GTATCC | 3 cut(s) | 391, 594, 2714 |
| BclI | TGATCA | 1 cut(s) | 135 |
| BcnI | CCSGG | 2 cut(s) | 797, 1411 |
| BcoDI | GTCTC | 4 cut(s) | 778, 2688, 3105, 3130 |
| BfmI | CTRYAG | 5 cut(s) | 1068, 1665, 1876, 2349, 3273 |
| BfrI | CTTAAG | 3 cut(s) | 301, 1916, 3307 |
| BfuAI | ACCTGC | 3 cut(s) | 2146, 2821, 3256 |
| BfuI | GTATCC | 3 cut(s) | 391, 594, 2714 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 89, 908 |
| BglII | AGATCT | 1 cut(s) | 1400 |
| BlpI | GCTNAGC | 1 cut(s) | 2010 |
| BmcAI | AGTACT | 1 cut(s) | 2609 |
| Bme18I | GGWCC | 7 cut(s) | 657, 1544, 2870, 3336, 3383, 3776, 3794 |
| BmrI | ACTGGG | 1 cut(s) | 354 |
| BmsI | GCATC | 8 cut(s) | 70, 85, 1711, 2030, 2050, 2958, 3622, 3833 |
| BmtI | GCTAGC | 2 cut(s) | 741, 2463 |
| BmuI | ACTGGG | 1 cut(s) | 354 |
| BpiI | GAAGAC | 2 cut(s) | 399, 3271 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2381, 2413 |
| BpmI | CTGGAG | 3 cut(s) | 3219, 3363, 3561 |
| Bpu10I | CCTNAGC | 1 cut(s) | 915 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2010 |
| BpuMI | CCSGG | 2 cut(s) | 797, 1411 |
| Bsa29I | ATCGAT | 1 cut(s) | 2772 |
| BsaAI | YACGTR | 1 cut(s) | 3365 |
| BsaHI | GRCGYC | 1 cut(s) | 1414 |
| BsaI | GGTCTC | 3 cut(s) | 778, 3105, 3130 |
| BsaWI | WCCGGW | 1 cut(s) | 38 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 674, 704, 1369, 1399, 1791, 1821, 3358, 3388 |
| Bse1I | ACTGG | 6 cut(s) | 349, 751, 2301, 2441, 3511, 3578 |
| Bse21I | CCTNAGG | 2 cut(s) | 1062, 3061 |
| Bse3DI | GCAATG | 8 cut(s) | 165, 178, 466, 623, 2041, 2910, 3251, 3559 |
| BseBI | CCWGG | 8 cut(s) | 588, 854, 1242, 1785, 2184, 3147, 3381, 3670 |
| BseCI | ATCGAT | 1 cut(s) | 2772 |
| BseGI | GGATG | 9 cut(s) | 85, 100, 343, 556, 1645, 2085, 2819, 2825, 2909 |
| BseMI | GCAATG | 8 cut(s) | 165, 178, 466, 623, 2041, 2910, 3251, 3559 |
| BseNI | ACTGG | 6 cut(s) | 349, 751, 2301, 2441, 3511, 3578 |
| BseRI | GAGGAG | 4 cut(s) | 2264, 2705, 3249, 3366 |
| BseSI | GKGCMC | 2 cut(s) | 2044, 3356 |
| BseYI | CCCAGC | 2 cut(s) | 762, 3413 |
| BsgI | GTGCAG | 4 cut(s) | 465, 2099, 2234, 2799 |
| BshFI | GGCC | 8 cut(s) | 902, 920, 1582, 2471, 3035, 3126, 3354, 3925 |
| BshNI | GGYRCC | 5 cut(s) | 41, 185, 792, 1961, 3723 |
| BshVI | ATCGAT | 1 cut(s) | 2772 |
| BsiHKAI | GWGCWC | 4 cut(s) | 2044, 2511, 2650, 3842 |
| BsiSI | CCGG | 8 cut(s) | 39, 84, 200, 384, 720, 797, 1410, 3486 |
| BslFI | GGGAC | 9 cut(s) | 587, 796, 1228, 3082, 3322, 3409, 3762, 3780, 3892 |
| BsmAI | GTCTC | 4 cut(s) | 778, 2688, 3105, 3130 |
| BsmFI | GGGAC | 9 cut(s) | 587, 796, 1228, 3082, 3322, 3409, 3762, 3780, 3892 |
| BsmI | GAATGC | 1 cut(s) | 3498 |
| BsnI | GGCC | 8 cut(s) | 902, 920, 1582, 2471, 3035, 3126, 3354, 3925 |
| Bso31I | GGTCTC | 3 cut(s) | 778, 3105, 3130 |
| Bsp120I | GGGCCC | 1 cut(s) | 3352 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1676, 2044, 2511, 2650, 3356, 3842 |
| Bsp1407I | TGTACA | 1 cut(s) | 3622 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2010 |
| Bsp19I | CCATGG | 1 cut(s) | 295 |
| BspANI | GGCC | 8 cut(s) | 902, 920, 1582, 2471, 3035, 3126, 3354, 3925 |
| BspDI | ATCGAT | 1 cut(s) | 2772 |
| BspHI | TCATGA | 2 cut(s) | 943, 3991 |
| BspMAI | CTGCAG | 2 cut(s) | 2353, 3277 |
| BspMI | ACCTGC | 3 cut(s) | 2146, 2821, 3256 |
| BspOI | GCTAGC | 2 cut(s) | 741, 2463 |
| BspPI | GGATC | 9 cut(s) | 286, 299, 300, 1155, 1655, 1668, 2705, 3450, 3647 |
| BspT107I | GGYRCC | 5 cut(s) | 41, 185, 792, 1961, 3723 |
| BspTI | CTTAAG | 3 cut(s) | 301, 1916, 3307 |
| BspTNI | GGTCTC | 3 cut(s) | 778, 3105, 3130 |
| BsrDI | GCAATG | 8 cut(s) | 165, 178, 466, 623, 2041, 2910, 3251, 3559 |
| BsrGI | TGTACA | 1 cut(s) | 3622 |
| BsrI | ACTGG | 6 cut(s) | 349, 751, 2301, 2441, 3511, 3578 |
| BssNI | GRCGYC | 1 cut(s) | 1414 |
| BssSI | CACGAG | 1 cut(s) | 3435 |
| BssT1I | CCWWGG | 4 cut(s) | 295, 991, 1977, 2830 |
| Bst2BI | CACGAG | 1 cut(s) | 3435 |
| Bst2UI | CCWGG | 8 cut(s) | 588, 854, 1242, 1785, 2184, 3147, 3381, 3670 |
| Bst6I | CTCTTC | 2 cut(s) | 1498, 2581 |
| BstACI | GRCGYC | 1 cut(s) | 1414 |
| BstAFI | CTTAAG | 3 cut(s) | 301, 1916, 3307 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 881 |
| BstAUI | TGTACA | 1 cut(s) | 3622 |
| BstBAI | YACGTR | 1 cut(s) | 3365 |
| BstC8I | GCNNGC | 9 cut(s) | 491, 739, 1672, 2461, 2574, 3498, 3540, 3550, 3951 |
| BstDSI | CCRYGG | 2 cut(s) | 295, 897 |
| BstEII | GGTNACC | 1 cut(s) | 3590 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2094 |
| BstF5I | GGATG | 9 cut(s) | 85, 100, 343, 556, 1645, 2085, 2819, 2825, 2909 |
| BstHHI | GCGC | 2 cut(s) | 421, 3955 |
| BstMAI | GTCTC | 4 cut(s) | 778, 2688, 3105, 3130 |
| BstNI | CCWGG | 8 cut(s) | 588, 854, 1242, 1785, 2184, 3147, 3381, 3670 |
| BstNSI | RCATGY | 5 cut(s) | 1427, 2572, 3623, 3907, 3953 |
| BstPI | GGTNACC | 1 cut(s) | 3590 |
| BstSFI | CTRYAG | 5 cut(s) | 1068, 1665, 1876, 2349, 3273 |
| BstSLI | GKGCMC | 2 cut(s) | 2044, 3356 |
| BstSNI | TACGTA | 1 cut(s) | 3365 |
| BstV2I | GAAGAC | 2 cut(s) | 399, 3271 |
| BstX2I | RGATCY | 6 cut(s) | 291, 305, 1400, 1660, 3455, 3652 |
| BstYI | RGATCY | 6 cut(s) | 291, 305, 1400, 1660, 3455, 3652 |
| Bsu15I | ATCGAT | 1 cut(s) | 2772 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1062, 3061 |
| BsuI | GTATCC | 3 cut(s) | 391, 594, 2714 |
| BsuRI | GGCC | 8 cut(s) | 902, 920, 1582, 2471, 3035, 3126, 3354, 3925 |
| BsuTUI | ATCGAT | 1 cut(s) | 2772 |
| BtgI | CCRYGG | 2 cut(s) | 295, 897 |
| BtsCI | GGATG | 9 cut(s) | 85, 100, 343, 556, 1645, 2085, 2819, 2825, 2909 |
| BtsI | GCAGTG | 2 cut(s) | 394, 1599 |
| BtsIMutI | CAGTG | 7 cut(s) | 342, 394, 1599, 2071, 2182, 2434, 3585 |
| BveI | ACCTGC | 3 cut(s) | 2146, 2821, 3256 |
| Cac8I | GCNNGC | 9 cut(s) | 491, 739, 1672, 2461, 2574, 3498, 3540, 3550, 3951 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1682, 2405 |
| CciI | TCATGA | 2 cut(s) | 943, 3991 |
| CfoI | GCGC | 2 cut(s) | 421, 3955 |
| ClaI | ATCGAT | 1 cut(s) | 2772 |
| CseI | GACGC | 1 cut(s) | 1403 |
| Csp6I | GTAC | 9 cut(s) | 561, 622, 793, 835, 1962, 2608, 3366, 3623, 3724 |
| CviQI | GTAC | 9 cut(s) | 561, 622, 793, 835, 1962, 2608, 3366, 3623, 3724 |
| DraI | TTTAAA | 1 cut(s) | 3321 |
| DraIII | CACNNNGTG | 3 cut(s) | 376, 980, 2077 |
| EaeI | YGGCCR | 2 cut(s) | 900, 1580 |
| Eam1104I | CTCTTC | 2 cut(s) | 1498, 2581 |
| EarI | CTCTTC | 2 cut(s) | 1498, 2581 |
| EciI | GGCGGA | 3 cut(s) | 47, 107, 164 |
| Ecl136II | GAGCTC | 1 cut(s) | 3840 |
| Eco105I | TACGTA | 1 cut(s) | 3365 |
| Eco130I | CCWWGG | 4 cut(s) | 295, 991, 1977, 2830 |
| Eco147I | AGGCCT | 1 cut(s) | 3925 |
| Eco24I | GRGCYC | 3 cut(s) | 1676, 3356, 3842 |
| Eco31I | GGTCTC | 3 cut(s) | 778, 3105, 3130 |
| Eco32I | GATATC | 1 cut(s) | 435 |
| Eco47I | GGWCC | 7 cut(s) | 657, 1544, 2870, 3336, 3383, 3776, 3794 |
| Eco53kI | GAGCTC | 1 cut(s) | 3840 |
| Eco57I | CTGAAG | 6 cut(s) | 753, 2076, 2598, 2673, 3261, 3375 |
| Eco81I | CCTNAGG | 2 cut(s) | 1062, 3061 |
| Eco91I | GGTNACC | 1 cut(s) | 3590 |
| EcoICRI | GAGCTC | 1 cut(s) | 3840 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2094 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2870, 3336, 3352 |
| EcoO65I | GGTNACC | 1 cut(s) | 3590 |
| EcoRII | CCWGG | 8 cut(s) | 586, 852, 1240, 1783, 2182, 3145, 3379, 3668 |
| EcoRV | GATATC | 1 cut(s) | 435 |
| EcoT14I | CCWWGG | 4 cut(s) | 295, 991, 1977, 2830 |
| EcoT22I | ATGCAT | 2 cut(s) | 2973, 3951 |
| EcoT38I | GRGCYC | 3 cut(s) | 1676, 3356, 3842 |
| ErhI | CCWWGG | 4 cut(s) | 295, 991, 1977, 2830 |
| FalI | AAGNNNNNCTT | 5 cut(s) | 1834, 1866, 3301, 3333, 3987 |
| FaqI | GGGAC | 9 cut(s) | 587, 796, 1228, 3082, 3322, 3409, 3762, 3780, 3892 |
| FauI | CCCGC | 4 cut(s) | 175, 364, 1663, 3083 |
| FauNDI | CATATG | 2 cut(s) | 804, 1381 |
| FbaI | TGATCA | 1 cut(s) | 135 |
| FokI | GGATG | 9 cut(s) | 92, 107, 350, 563, 1652, 2072, 2806, 2812, 2896 |
| FriOI | GRGCYC | 3 cut(s) | 1676, 3356, 3842 |
| FspI | TGCGCA | 1 cut(s) | 420 |
| GlaI | GCGC | 2 cut(s) | 420, 3954 |
| GsaI | CCCAGC | 2 cut(s) | 766, 3417 |
| GsuI | CTGGAG | 3 cut(s) | 3219, 3363, 3561 |
| HaeIII | GGCC | 8 cut(s) | 902, 920, 1582, 2471, 3035, 3126, 3354, 3925 |
| HapII | CCGG | 8 cut(s) | 39, 84, 200, 384, 720, 797, 1410, 3486 |
| HgaI | GACGC | 1 cut(s) | 1403 |
| HhaI | GCGC | 2 cut(s) | 421, 3955 |
| Hin1I | GRCGYC | 1 cut(s) | 1414 |
| Hin6I | GCGC | 2 cut(s) | 419, 3953 |
| HinP1I | GCGC | 2 cut(s) | 419, 3953 |
| HincII | GTYRAC | 3 cut(s) | 1141, 1931, 3469 |
| HindII | GTYRAC | 3 cut(s) | 1141, 1931, 3469 |
| HindIII | AAGCTT | 2 cut(s) | 510, 2012 |
| HpaI | GTTAAC | 1 cut(s) | 1141 |
| HpaII | CCGG | 8 cut(s) | 39, 84, 200, 384, 720, 797, 1410, 3486 |
| HpyCH4IV | ACGT | 3 cut(s) | 2453, 2663, 3364 |
| HpySE526I | ACGT | 3 cut(s) | 2453, 2663, 3364 |
| Hsp92I | GRCGYC | 1 cut(s) | 1414 |
| HspAI | GCGC | 2 cut(s) | 419, 3953 |
| KflI | GGGWCCC | 1 cut(s) | 3336 |
| KpnI | GGTACC | 3 cut(s) | 796, 1965, 3727 |
| Ksp22I | TGATCA | 1 cut(s) | 135 |
| KspAI | GTTAAC | 1 cut(s) | 1141 |
| LweI | GCATC | 8 cut(s) | 70, 85, 1711, 2030, 2050, 2958, 3622, 3833 |
| MaeII | ACGT | 3 cut(s) | 2453, 2663, 3364 |
| MaeIII | GTNAC | 9 cut(s) | 25, 664, 727, 972, 986, 1432, 3513, 3590, 3980 |
| MfeI | CAATTG | 1 cut(s) | 846 |
| MflI | RGATCY | 6 cut(s) | 291, 305, 1400, 1660, 3455, 3652 |
| MhlI | GDGCHC | 6 cut(s) | 1676, 2044, 2511, 2650, 3356, 3842 |
| MlyI | GAGTC | 6 cut(s) | 131, 173, 554, 1091, 2399, 3671 |
| MmeI | TCCRAC | 6 cut(s) | 528, 1375, 1412, 1777, 1789, 2563 |
| Mph1103I | ATGCAT | 2 cut(s) | 2973, 3951 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1402, 2590, 2983 |
| MslI | CAYNNNNRTG | 3 cut(s) | 948, 1463, 3578 |
| MspA1I | CMGCKG | 2 cut(s) | 3106, 3239 |
| MspCI | CTTAAG | 3 cut(s) | 301, 1916, 3307 |
| MspI | CCGG | 8 cut(s) | 39, 84, 200, 384, 720, 797, 1410, 3486 |
| MunI | CAATTG | 1 cut(s) | 846 |
| Mva1269I | GAATGC | 1 cut(s) | 3498 |
| MvaI | CCWGG | 8 cut(s) | 588, 854, 1242, 1785, 2184, 3147, 3381, 3670 |
| NciI | CCSGG | 2 cut(s) | 797, 1411 |
| NcoI | CCATGG | 1 cut(s) | 295 |
| NdeI | CATATG | 2 cut(s) | 804, 1381 |
| NheI | GCTAGC | 2 cut(s) | 737, 2459 |
| NmuCI | GTSAC | 5 cut(s) | 727, 972, 3513, 3590, 3980 |
| NsbI | TGCGCA | 1 cut(s) | 420 |
| NsiI | ATGCAT | 2 cut(s) | 2973, 3951 |
| NspI | RCATGY | 5 cut(s) | 1427, 2572, 3623, 3907, 3953 |
| OliI | CACNNNNGTG | 1 cut(s) | 3578 |
| PaeI | GCATGC | 1 cut(s) | 3953 |
| PagI | TCATGA | 2 cut(s) | 943, 3991 |
| PaqCI | CACCTGC | 1 cut(s) | 2821 |
| PceI | AGGCCT | 1 cut(s) | 3925 |
| PciI | ACATGT | 1 cut(s) | 3619 |
| PctI | GAATGC | 1 cut(s) | 3498 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1402, 2590, 2983 |
| PfeI | GAWTC | 9 cut(s) | 14, 35, 203, 209, 233, 1859, 1997, 2597, 3017 |
| PflFI | GACNNNGTC | 1 cut(s) | 2415 |
| PflMI | CCANNNNNTGG | 7 cut(s) | 1097, 1114, 1394, 2999, 3601, 3751, 3962 |
| PfoI | TCCNGGA | 1 cut(s) | 3379 |
| PleI | GAGTC | 6 cut(s) | 130, 172, 553, 1090, 2398, 3671 |
| PpsI | GAGTC | 6 cut(s) | 130, 172, 553, 1090, 2398, 3671 |
| Ppu21I | YACGTR | 1 cut(s) | 3365 |
| PpuMI | RGGWCCY | 2 cut(s) | 2870, 3336 |
| PscI | ACATGT | 1 cut(s) | 3619 |
| PshBI | ATTAAT | 1 cut(s) | 1614 |
| PsiI | TTATAA | 1 cut(s) | 1023 |
| Psp124BI | GAGCTC | 1 cut(s) | 3842 |
| Psp5II | RGGWCCY | 2 cut(s) | 2870, 3336 |
| Psp6I | CCWGG | 8 cut(s) | 586, 852, 1240, 1783, 2182, 3145, 3379, 3668 |
| PspEI | GGTNACC | 1 cut(s) | 3590 |
| PspFI | CCCAGC | 2 cut(s) | 762, 3413 |
| PspGI | CCWGG | 8 cut(s) | 586, 852, 1240, 1783, 2182, 3145, 3379, 3668 |
| PspOMI | GGGCCC | 1 cut(s) | 3352 |
| PspPPI | RGGWCCY | 2 cut(s) | 2870, 3336 |
| PstI | CTGCAG | 2 cut(s) | 2353, 3277 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1682, 2405 |
| PsuI | RGATCY | 6 cut(s) | 291, 305, 1400, 1660, 3455, 3652 |
| PsyI | GACNNNGTC | 1 cut(s) | 2415 |
| PvuII | CAGCTG | 2 cut(s) | 3106, 3239 |
| RsaI | GTAC | 9 cut(s) | 562, 623, 794, 836, 1963, 2609, 3367, 3624, 3725 |
| RsaNI | GTAC | 9 cut(s) | 561, 622, 793, 835, 1962, 2608, 3366, 3623, 3724 |
| RseI | CAYNNNNRTG | 3 cut(s) | 948, 1463, 3578 |
| SacI | GAGCTC | 1 cut(s) | 3842 |
| ScaI | AGTACT | 1 cut(s) | 2609 |
| SchI | GAGTC | 6 cut(s) | 131, 173, 554, 1091, 2399, 3671 |
| SduI | GDGCHC | 6 cut(s) | 1676, 2044, 2511, 2650, 3356, 3842 |
| SfaNI | GCATC | 8 cut(s) | 70, 85, 1711, 2030, 2050, 2958, 3622, 3833 |
| SfcI | CTRYAG | 5 cut(s) | 1068, 1665, 1876, 2349, 3273 |
| SinI | GGWCC | 7 cut(s) | 657, 1544, 2870, 3336, 3383, 3776, 3794 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 948, 1463, 3578 |
| SmlI | CTYRAG | 3 cut(s) | 301, 1916, 3307 |
| SmoI | CTYRAG | 3 cut(s) | 301, 1916, 3307 |
| SnaBI | TACGTA | 1 cut(s) | 3365 |
| SphI | GCATGC | 1 cut(s) | 3953 |
| SseBI | AGGCCT | 1 cut(s) | 3925 |
| SspI | AATATT | 2 cut(s) | 2498, 2622 |
| SstI | GAGCTC | 1 cut(s) | 3842 |
| StuI | AGGCCT | 1 cut(s) | 3925 |
| StyI | CCWWGG | 4 cut(s) | 295, 991, 1977, 2830 |
| TaiI | ACGT | 3 cut(s) | 2456, 2666, 3367 |
| TaqI | TCGA | 4 cut(s) | 125, 639, 2449, 2772 |
| TatI | WGTACW | 2 cut(s) | 2607, 3622 |
| TauI | GCSGC | 2 cut(s) | 23, 3937 |
| TfiI | GAWTC | 9 cut(s) | 14, 35, 203, 209, 233, 1859, 1997, 2597, 3017 |
| TscAI | CASTG | 7 cut(s) | 349, 394, 1599, 2078, 2182, 2441, 3585 |
| TseFI | GTSAC | 5 cut(s) | 727, 972, 3513, 3590, 3980 |
| Tsp45I | GTSAC | 5 cut(s) | 727, 972, 3513, 3590, 3980 |
| TspRI | CASTG | 7 cut(s) | 349, 394, 1599, 2078, 2182, 2441, 3585 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2415 |
| Van91I | CCANNNNNTGG | 7 cut(s) | 1097, 1114, 1394, 2999, 3601, 3751, 3962 |
| Vha464I | CTTAAG | 3 cut(s) | 301, 1916, 3307 |
| VneI | GTGCAC | 1 cut(s) | 2040 |
| VpaK11BI | GGWCC | 7 cut(s) | 657, 1544, 2870, 3336, 3383, 3776, 3794 |
| VspI | ATTAAT | 1 cut(s) | 1614 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2094 |
| XapI | RAATTY | 2 cut(s) | 2254, 2383 |
| XbaI | TCTAGA | 2 cut(s) | 1993, 2686 |
| XceI | RCATGY | 5 cut(s) | 1427, 2572, 3623, 3907, 3953 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2792 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1402, 2590, 2983 |
| ZrmI | AGTACT | 1 cut(s) | 2609 |
| Zsp2I | ATGCAT | 2 cut(s) | 2973, 3951 |