Protein transport protein sec16
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2185 |
| Acc16I | TGCGCA | 1 cut(s) | 2881 |
| Acc36I | ACCTGC | 3 cut(s) | 2185, 2293, 3709 |
| Acc65I | GGTACC | 2 cut(s) | 167, 2681 |
| AccB1I | GGYRCC | 3 cut(s) | 167, 2681, 4420 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 3463, 4031, 4568 |
| AccBSI | CCGCTC | 1 cut(s) | 3586 |
| AccI | GTMKAC | 1 cut(s) | 4689 |
| AccII | CGCG | 1 cut(s) | 372 |
| AcoI | YGGCCR | 3 cut(s) | 3, 297, 4172 |
| AcsI | RAATTY | 9 cut(s) | 718, 838, 1078, 1327, 1387, 2811, 3085, 3622, 4208 |
| AcuI | CTGAAG | 5 cut(s) | 1428, 2823, 3489, 3930, 4656 |
| AcvI | CACGTG | 1 cut(s) | 4460 |
| AflIII | ACRYGT | 1 cut(s) | 3123 |
| AgeI | ACCGGT | 1 cut(s) | 170 |
| AhlI | ACTAGT | 1 cut(s) | 182 |
| AjnI | CCWGG | 8 cut(s) | 438, 2376, 2503, 3724, 3787, 3886, 4519, 4561 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 169, 201 |
| Alw21I | GWGCWC | 2 cut(s) | 2773, 3541 |
| Alw26I | GTCTC | 2 cut(s) | 1723, 2854 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 788, 1148, 1406 |
| Ama87I | CYCGRG | 3 cut(s) | 1021, 3534, 4042 |
| AoxI | GGCC | 7 cut(s) | 3, 297, 864, 984, 2253, 4172, 4379 |
| ApoI | RAATTY | 9 cut(s) | 718, 838, 1078, 1327, 1387, 2811, 3085, 3622, 4208 |
| AseI | ATTAAT | 2 cut(s) | 2400, 3938 |
| AsiGI | ACCGGT | 1 cut(s) | 170 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 184, 4015, 4623 |
| Asp718I | GGTACC | 2 cut(s) | 167, 2681 |
| AspLEI | GCGC | 2 cut(s) | 2483, 2882 |
| AspS9I | GGNCC | 7 cut(s) | 864, 984, 1969, 2507, 2608, 2903, 4379 |
| AsuC2I | CCSGG | 5 cut(s) | 1269, 1578, 2779, 3852, 4171 |
| AsuHPI | GGTGA | 8 cut(s) | 215, 416, 467, 1360, 2166, 2945, 2985, 4208 |
| AsuII | TTCGAA | 2 cut(s) | 143, 3290 |
| AvaI | CYCGRG | 3 cut(s) | 1021, 3534, 4042 |
| AvaII | GGWCC | 4 cut(s) | 1969, 2507, 2608, 2903 |
| AxyI | CCTNAGG | 2 cut(s) | 2133, 3543 |
| BaeGI | GKGCMC | 2 cut(s) | 402, 4423 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1395, 1428 |
| BalI | TGGCCA | 2 cut(s) | 5, 299 |
| BamHI | GGATCC | 1 cut(s) | 442 |
| BanI | GGYRCC | 3 cut(s) | 167, 2681, 4420 |
| BanII | GRGCYC | 3 cut(s) | 1204, 2384, 3598 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2826, 2858, 4263, 4295 |
| BauI | CACGAG | 1 cut(s) | 2249 |
| BbrPI | CACGTG | 1 cut(s) | 4460 |
| BbsI | GAAGAC | 4 cut(s) | 711, 831, 951, 3924 |
| Bbv12I | GWGCWC | 2 cut(s) | 2773, 3541 |
| BbvCI | CCTCAGC | 2 cut(s) | 3735, 3798 |
| BceAI | ACGGC | 2 cut(s) | 223, 3113 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2750, 2784, 4232, 4266 |
| BciT130I | CCWGG | 8 cut(s) | 440, 2378, 2505, 3726, 3789, 3888, 4521, 4563 |
| BciVI | GTATCC | 1 cut(s) | 1314 |
| BclI | TGATCA | 5 cut(s) | 1648, 1759, 1885, 2935, 3322 |
| BcnI | CCSGG | 5 cut(s) | 1269, 1578, 2779, 3852, 4171 |
| BcoDI | GTCTC | 2 cut(s) | 1723, 2854 |
| BcuI | ACTAGT | 1 cut(s) | 182 |
| BfmI | CTRYAG | 9 cut(s) | 105, 248, 447, 558, 1398, 1445, 1629, 2385, 4302 |
| BfoI | RGCGCY | 1 cut(s) | 2484 |
| BfuAI | ACCTGC | 3 cut(s) | 2185, 2293, 3709 |
| BfuI | GTATCC | 1 cut(s) | 1314 |
| BlpI | GCTNAGC | 2 cut(s) | 117, 3861 |
| BmcAI | AGTACT | 1 cut(s) | 3673 |
| Bme18I | GGWCC | 4 cut(s) | 1969, 2507, 2608, 2903 |
| BmeT110I | CYCGRG | 3 cut(s) | 1021, 3534, 4042 |
| BmgT120I | GGNCC | 7 cut(s) | 864, 984, 1969, 2507, 2608, 2903, 4379 |
| BmrI | ACTGGG | 4 cut(s) | 1564, 1870, 3145, 4431 |
| BmuI | ACTGGG | 4 cut(s) | 1564, 1870, 3145, 4431 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2061 |
| BpiI | GAAGAC | 4 cut(s) | 711, 831, 951, 3924 |
| BpmI | CTGGAG | 3 cut(s) | 2210, 3599, 4245 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3735, 3798 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 117, 3861 |
| Bpu14I | TTCGAA | 2 cut(s) | 143, 3290 |
| BpuEI | CTTGAG | 5 cut(s) | 1353, 2849, 3299, 4214, 4465 |
| BpuMI | CCSGG | 5 cut(s) | 1269, 1578, 2779, 3852, 4171 |
| Bsa29I | ATCGAT | 1 cut(s) | 63 |
| BsaAI | YACGTR | 1 cut(s) | 4460 |
| BsaJI | CCNNGG | 7 cut(s) | 1576, 1819, 2145, 2377, 4266, 4519, 4562 |
| BsaWI | WCCGGW | 3 cut(s) | 170, 478, 4600 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 169, 199 |
| Bse118I | RCCGGY | 2 cut(s) | 170, 1971 |
| Bse21I | CCTNAGG | 2 cut(s) | 2133, 3543 |
| Bse3DI | GCAATG | 2 cut(s) | 2077, 2996 |
| BseBI | CCWGG | 8 cut(s) | 440, 2378, 2505, 3726, 3789, 3888, 4521, 4563 |
| BseCI | ATCGAT | 1 cut(s) | 63 |
| BseDI | CCNNGG | 7 cut(s) | 1576, 1819, 2145, 2377, 4266, 4519, 4562 |
| BseMI | GCAATG | 2 cut(s) | 2077, 2996 |
| BseRI | GAGGAG | 1 cut(s) | 3596 |
| BseSI | GKGCMC | 2 cut(s) | 402, 4423 |
| BseYI | CCCAGC | 1 cut(s) | 4396 |
| BsgI | GTGCAG | 7 cut(s) | 833, 1478, 1533, 2271, 3228, 3687, 4440 |
| Bsh1236I | CGCG | 1 cut(s) | 372 |
| BshFI | GGCC | 7 cut(s) | 5, 299, 866, 986, 2255, 4174, 4381 |
| BshNI | GGYRCC | 3 cut(s) | 167, 2681, 4420 |
| BshTI | ACCGGT | 1 cut(s) | 170 |
| BshVI | ATCGAT | 1 cut(s) | 63 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2773, 3541 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1021, 3534, 4042 |
| BsiSI | CCGG | 9 cut(s) | 171, 479, 1269, 1578, 1972, 2779, 3851, 4171, 4601 |
| BslFI | GGGAC | 4 cut(s) | 2621, 2916, 3243, 4894 |
| BsmAI | GTCTC | 2 cut(s) | 1723, 2854 |
| BsmFI | GGGAC | 4 cut(s) | 2621, 2916, 3243, 4894 |
| BsmI | GAATGC | 1 cut(s) | 4326 |
| BsnI | GGCC | 7 cut(s) | 5, 299, 866, 986, 2255, 4174, 4381 |
| BsoBI | CYCGRG | 3 cut(s) | 1021, 3534, 4042 |
| Bsp119I | TTCGAA | 2 cut(s) | 143, 3290 |
| Bsp1286I | GDGCHC | 7 cut(s) | 402, 1204, 2384, 2773, 3541, 3598, 4423 |
| Bsp1407I | TGTACA | 1 cut(s) | 4765 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 117, 3861 |
| Bsp19I | CCATGG | 1 cut(s) | 1819 |
| BspANI | GGCC | 7 cut(s) | 5, 299, 866, 986, 2255, 4174, 4381 |
| BspDI | ATCGAT | 1 cut(s) | 63 |
| BspFNI | CGCG | 1 cut(s) | 372 |
| BspHI | TCATGA | 1 cut(s) | 4987 |
| BspMAI | CTGCAG | 4 cut(s) | 252, 1402, 1449, 4306 |
| BspMI | ACCTGC | 3 cut(s) | 2185, 2293, 3709 |
| BspQI | GCTCTTC | 1 cut(s) | 2052 |
| BspT104I | TTCGAA | 2 cut(s) | 143, 3290 |
| BspT107I | GGYRCC | 3 cut(s) | 167, 2681, 4420 |
| BsrBI | CCGCTC | 1 cut(s) | 3586 |
| BsrDI | GCAATG | 2 cut(s) | 2077, 2996 |
| BsrFI | RCCGGY | 2 cut(s) | 170, 1971 |
| BsrGI | TGTACA | 1 cut(s) | 4765 |
| BssAI | RCCGGY | 2 cut(s) | 170, 1971 |
| BssECI | CCNNGG | 7 cut(s) | 1576, 1819, 2145, 2377, 4266, 4519, 4562 |
| BssSI | CACGAG | 1 cut(s) | 2249 |
| BssT1I | CCWWGG | 2 cut(s) | 1819, 2145 |
| Bst2BI | CACGAG | 1 cut(s) | 2249 |
| Bst2UI | CCWGG | 8 cut(s) | 440, 2378, 2505, 3726, 3789, 3888, 4521, 4563 |
| Bst6I | CTCTTC | 3 cut(s) | 2052, 3135, 4551 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1456, 2794 |
| BstAUI | TGTACA | 1 cut(s) | 4765 |
| BstBAI | YACGTR | 1 cut(s) | 4460 |
| BstBI | TTCGAA | 2 cut(s) | 143, 3290 |
| BstDSI | CCRYGG | 1 cut(s) | 1819 |
| BstFNI | CGCG | 1 cut(s) | 372 |
| BstH2I | RGCGCY | 1 cut(s) | 2484 |
| BstHHI | GCGC | 2 cut(s) | 2483, 2882 |
| BstMAI | GTCTC | 2 cut(s) | 1723, 2854 |
| BstNI | CCWGG | 8 cut(s) | 440, 2378, 2505, 3726, 3789, 3888, 4521, 4563 |
| BstNSI | RCATGY | 9 cut(s) | 1676, 1913, 1994, 2294, 2788, 3127, 3463, 3815, 3878 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2061 |
| BstSFI | CTRYAG | 9 cut(s) | 105, 248, 447, 558, 1398, 1445, 1629, 2385, 4302 |
| BstSLI | GKGCMC | 2 cut(s) | 402, 4423 |
| BstUI | CGCG | 1 cut(s) | 372 |
| BstV2I | GAAGAC | 4 cut(s) | 711, 831, 951, 3924 |
| BstX2I | RGATCY | 5 cut(s) | 244, 442, 637, 1066, 1868 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2369, 3643 |
| BstYI | RGATCY | 5 cut(s) | 244, 442, 637, 1066, 1868 |
| Bsu15I | ATCGAT | 1 cut(s) | 63 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2133, 3543 |
| BsuI | GTATCC | 1 cut(s) | 1314 |
| BsuRI | GGCC | 7 cut(s) | 5, 299, 866, 986, 2255, 4174, 4381 |
| BsuTUI | ATCGAT | 1 cut(s) | 63 |
| BtgI | CCRYGG | 1 cut(s) | 1819 |
| BtgZI | GCGATG | 3 cut(s) | 2177, 2907, 4249 |
| BtsI | GCAGTG | 3 cut(s) | 1304, 1461, 4969 |
| BtsIMutI | CAGTG | 5 cut(s) | 336, 1304, 1461, 4346, 4969 |
| BveI | ACCTGC | 3 cut(s) | 2185, 2293, 3709 |
| CaiI | CAGNNNCTG | 3 cut(s) | 788, 1148, 1406 |
| CciI | TCATGA | 1 cut(s) | 4987 |
| CfoI | GCGC | 2 cut(s) | 2483, 2882 |
| Cfr10I | RCCGGY | 2 cut(s) | 170, 1971 |
| Cfr13I | GGNCC | 7 cut(s) | 864, 984, 1969, 2507, 2608, 2903, 4379 |
| ClaI | ATCGAT | 1 cut(s) | 63 |
| CseI | GACGC | 1 cut(s) | 2450 |
| CspAI | ACCGGT | 1 cut(s) | 170 |
| DraI | TTTAAA | 1 cut(s) | 1857 |
| EaeI | YGGCCR | 3 cut(s) | 3, 297, 4172 |
| Eam1104I | CTCTTC | 3 cut(s) | 2052, 3135, 4551 |
| EarI | CTCTTC | 3 cut(s) | 2052, 3135, 4551 |
| EciI | GGCGGA | 2 cut(s) | 4281, 4695 |
| Eco130I | CCWWGG | 2 cut(s) | 1819, 2145 |
| Eco24I | GRGCYC | 3 cut(s) | 1204, 2384, 3598 |
| Eco47I | GGWCC | 4 cut(s) | 1969, 2507, 2608, 2903 |
| Eco57I | CTGAAG | 5 cut(s) | 1428, 2823, 3489, 3930, 4656 |
| Eco72I | CACGTG | 1 cut(s) | 4460 |
| Eco81I | CCTNAGG | 2 cut(s) | 2133, 3543 |
| Eco88I | CYCGRG | 3 cut(s) | 1021, 3534, 4042 |
| EcoRI | GAATTC | 1 cut(s) | 1327 |
| EcoRII | CCWGG | 8 cut(s) | 438, 2376, 2503, 3724, 3787, 3886, 4519, 4561 |
| EcoT14I | CCWWGG | 2 cut(s) | 1819, 2145 |
| EcoT22I | ATGCAT | 3 cut(s) | 1996, 2169, 2790 |
| EcoT38I | GRGCYC | 3 cut(s) | 1204, 2384, 3598 |
| ErhI | CCWWGG | 2 cut(s) | 1819, 2145 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 105, 137, 3261, 3293, 4852, 4884 |
| FaqI | GGGAC | 4 cut(s) | 2621, 2916, 3243, 4894 |
| FauI | CCCGC | 1 cut(s) | 365 |
| FauNDI | CATATG | 3 cut(s) | 2368, 2964, 3251 |
| FbaI | TGATCA | 5 cut(s) | 1648, 1759, 1885, 2935, 3322 |
| FblI | GTMKAC | 1 cut(s) | 4689 |
| FriOI | GRGCYC | 3 cut(s) | 1204, 2384, 3598 |
| FspAI | RTGCGCAY | 1 cut(s) | 2881 |
| FspI | TGCGCA | 1 cut(s) | 2881 |
| GlaI | GCGC | 2 cut(s) | 2482, 2881 |
| GsaI | CCCAGC | 1 cut(s) | 4400 |
| GsuI | CTGGAG | 3 cut(s) | 2210, 3599, 4245 |
| HaeII | RGCGCY | 1 cut(s) | 2484 |
| HaeIII | GGCC | 7 cut(s) | 5, 299, 866, 986, 2255, 4174, 4381 |
| HapII | CCGG | 9 cut(s) | 171, 479, 1269, 1578, 1972, 2779, 3851, 4171, 4601 |
| HgaI | GACGC | 1 cut(s) | 2450 |
| HhaI | GCGC | 2 cut(s) | 2483, 2882 |
| Hin6I | GCGC | 2 cut(s) | 2481, 2880 |
| HinP1I | GCGC | 2 cut(s) | 2481, 2880 |
| HincII | GTYRAC | 2 cut(s) | 1767, 1813 |
| HindII | GTYRAC | 2 cut(s) | 1767, 1813 |
| HindIII | AAGCTT | 1 cut(s) | 3443 |
| HpaII | CCGG | 9 cut(s) | 171, 479, 1269, 1578, 1972, 2779, 3851, 4171, 4601 |
| HphI | GGTGA | 8 cut(s) | 215, 416, 467, 1360, 2166, 2945, 2985, 4208 |
| Hpy166II | GTNNAC | 7 cut(s) | 1351, 1767, 1813, 2974, 3550, 4072, 4690 |
| Hpy8I | GTNNAC | 7 cut(s) | 1351, 1767, 1813, 2974, 3550, 4072, 4690 |
| Hpy99I | CGWCG | 2 cut(s) | 244, 4827 |
| HpyCH4IV | ACGT | 3 cut(s) | 3005, 4114, 4459 |
| HpySE526I | ACGT | 3 cut(s) | 3005, 4114, 4459 |
| HspAI | GCGC | 2 cut(s) | 2481, 2880 |
| KpnI | GGTACC | 2 cut(s) | 171, 2685 |
| Ksp22I | TGATCA | 5 cut(s) | 1648, 1759, 1885, 2935, 3322 |
| LguI | GCTCTTC | 1 cut(s) | 2052 |
| LmnI | GCTCC | 8 cut(s) | 235, 1207, 1441, 2149, 3113, 3583, 3634, 3958 |
| MaeII | ACGT | 3 cut(s) | 3005, 4114, 4459 |
| MbiI | CCGCTC | 1 cut(s) | 3586 |
| MfeI | CAATTG | 3 cut(s) | 392, 2040, 2894 |
| MflI | RGATCY | 5 cut(s) | 244, 442, 637, 1066, 1868 |
| MhlI | GDGCHC | 7 cut(s) | 402, 1204, 2384, 2773, 3541, 3598, 4423 |
| MlsI | TGGCCA | 2 cut(s) | 5, 299 |
| MluNI | TGGCCA | 2 cut(s) | 5, 299 |
| MlyI | GAGTC | 4 cut(s) | 266, 290, 1840, 4141 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 299 |
| Mph1103I | ATGCAT | 3 cut(s) | 1996, 2169, 2790 |
| MroXI | GAANNNNTTC | 3 cut(s) | 184, 4015, 4623 |
| MscI | TGGCCA | 2 cut(s) | 5, 299 |
| MslI | CAYNNNNRTG | 3 cut(s) | 405, 1527, 3250 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 299 |
| MspA1I | CMGCKG | 1 cut(s) | 4553 |
| MspI | CCGG | 9 cut(s) | 171, 479, 1269, 1578, 1972, 2779, 3851, 4171, 4601 |
| MunI | CAATTG | 3 cut(s) | 392, 2040, 2894 |
| Mva1269I | GAATGC | 1 cut(s) | 4326 |
| MvaI | CCWGG | 8 cut(s) | 440, 2378, 2505, 3726, 3789, 3888, 4521, 4563 |
| MvnI | CGCG | 1 cut(s) | 372 |
| NciI | CCSGG | 5 cut(s) | 1269, 1578, 2779, 3852, 4171 |
| NcoI | CCATGG | 1 cut(s) | 1819 |
| NdeI | CATATG | 3 cut(s) | 2368, 2964, 3251 |
| NmeAIII | GCCGAG | 1 cut(s) | 4291 |
| NmuCI | GTSAC | 6 cut(s) | 877, 2425, 2438, 4110, 4128, 4660 |
| NsbI | TGCGCA | 1 cut(s) | 2881 |
| NsiI | ATGCAT | 3 cut(s) | 1996, 2169, 2790 |
| NspI | RCATGY | 9 cut(s) | 1676, 1913, 1994, 2294, 2788, 3127, 3463, 3815, 3878 |
| NspV | TTCGAA | 2 cut(s) | 143, 3290 |
| PaeI | GCATGC | 4 cut(s) | 1676, 1913, 1994, 2788 |
| PaeR7I | CTCGAG | 1 cut(s) | 3534 |
| PagI | TCATGA | 1 cut(s) | 4987 |
| PaqCI | CACCTGC | 1 cut(s) | 2185 |
| PciI | ACATGT | 1 cut(s) | 3123 |
| PciSI | GCTCTTC | 1 cut(s) | 2052 |
| PctI | GAATGC | 1 cut(s) | 4326 |
| PdmI | GAANNNNTTC | 3 cut(s) | 184, 4015, 4623 |
| PflFI | GACNNNGTC | 1 cut(s) | 3306 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 3463, 4031, 4568 |
| PfoI | TCCNGGA | 2 cut(s) | 1267, 2503 |
| PinAI | ACCGGT | 1 cut(s) | 170 |
| PleI | GAGTC | 4 cut(s) | 265, 289, 1839, 4141 |
| PmaCI | CACGTG | 1 cut(s) | 4460 |
| PmlI | CACGTG | 1 cut(s) | 4460 |
| PpsI | GAGTC | 4 cut(s) | 265, 289, 1839, 4141 |
| Ppu21I | YACGTR | 1 cut(s) | 4460 |
| PscI | ACATGT | 1 cut(s) | 3123 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2061 |
| PshBI | ATTAAT | 2 cut(s) | 2400, 3938 |
| Psp6I | CCWGG | 8 cut(s) | 438, 2376, 2503, 3724, 3787, 3886, 4519, 4561 |
| PspCI | CACGTG | 1 cut(s) | 4460 |
| PspFI | CCCAGC | 1 cut(s) | 4396 |
| PspGI | CCWGG | 8 cut(s) | 438, 2376, 2503, 3724, 3787, 3886, 4519, 4561 |
| PspPI | GGNCC | 7 cut(s) | 864, 984, 1969, 2507, 2608, 2903, 4379 |
| PspXI | VCTCGAGB | 1 cut(s) | 3534 |
| PstI | CTGCAG | 4 cut(s) | 252, 1402, 1449, 4306 |
| PstNI | CAGNNNCTG | 3 cut(s) | 788, 1148, 1406 |
| PsuI | RGATCY | 5 cut(s) | 244, 442, 637, 1066, 1868 |
| PsyI | GACNNNGTC | 1 cut(s) | 3306 |
| PvuII | CAGCTG | 1 cut(s) | 4553 |
| RseI | CAYNNNNRTG | 3 cut(s) | 405, 1527, 3250 |
| SapI | GCTCTTC | 1 cut(s) | 2052 |
| Sau96I | GGNCC | 7 cut(s) | 864, 984, 1969, 2507, 2608, 2903, 4379 |
| ScaI | AGTACT | 1 cut(s) | 3673 |
| SchI | GAGTC | 4 cut(s) | 266, 290, 1840, 4141 |
| SduI | GDGCHC | 7 cut(s) | 402, 1204, 2384, 2773, 3541, 3598, 4423 |
| SfcI | CTRYAG | 9 cut(s) | 105, 248, 447, 558, 1398, 1445, 1629, 2385, 4302 |
| Sfr274I | CTCGAG | 1 cut(s) | 3534 |
| SfuI | TTCGAA | 2 cut(s) | 143, 3290 |
| SinI | GGWCC | 4 cut(s) | 1969, 2507, 2608, 2903 |
| SlaI | CTCGAG | 1 cut(s) | 3534 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 405, 1527, 3250 |
| SmlI | CTYRAG | 6 cut(s) | 1368, 2828, 3278, 3534, 4229, 4480 |
| SmoI | CTYRAG | 6 cut(s) | 1368, 2828, 3278, 3534, 4229, 4480 |
| SpeI | ACTAGT | 1 cut(s) | 182 |
| SphI | GCATGC | 4 cut(s) | 1676, 1913, 1994, 2788 |
| SspI | AATATT | 2 cut(s) | 3287, 3500 |
| StyI | CCWWGG | 2 cut(s) | 1819, 2145 |
| TaiI | ACGT | 3 cut(s) | 3008, 4117, 4462 |
| TatI | WGTACW | 4 cut(s) | 1664, 2203, 3671, 4765 |
| TscAI | CASTG | 5 cut(s) | 336, 1304, 1461, 4353, 4969 |
| TseFI | GTSAC | 6 cut(s) | 877, 2425, 2438, 4110, 4128, 4660 |
| Tsp45I | GTSAC | 6 cut(s) | 877, 2425, 2438, 4110, 4128, 4660 |
| TspGWI | ACGGA | 3 cut(s) | 50, 1296, 2444 |
| TspRI | CASTG | 5 cut(s) | 336, 1304, 1461, 4353, 4969 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3306 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 3463, 4031, 4568 |
| VpaK11BI | GGWCC | 4 cut(s) | 1969, 2507, 2608, 2903 |
| VspI | ATTAAT | 2 cut(s) | 2400, 3938 |
| XapI | RAATTY | 9 cut(s) | 718, 838, 1078, 1327, 1387, 2811, 3085, 3622, 4208 |
| XceI | RCATGY | 9 cut(s) | 1676, 1913, 1994, 2294, 2788, 3127, 3463, 3815, 3878 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1526 |
| XhoI | CTCGAG | 1 cut(s) | 3534 |
| XmiI | GTMKAC | 1 cut(s) | 4689 |
| XmnI | GAANNNNTTC | 3 cut(s) | 184, 4015, 4623 |
| ZrmI | AGTACT | 1 cut(s) | 3673 |
| Zsp2I | ATGCAT | 3 cut(s) | 1996, 2169, 2790 |