Rh7DG212600

Protein transport protein sec16

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
20480656 .. 20495282
14627 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG212600.1

Sequence Viewer

Length: 3483 bp
ATGGCTTCGAATCCTCCTCCATTTCAGGTGGAGGATACGGATGAGGATTTCTTTGATAAATTGGTCGAAGATGACCTCGAACCGCCGTCGTCGTCGGCGGCCGCGGCGGTGGCGGGACCCAATTTGAATGAGGGAAGTGATTCCGACGACGCCAAGGCGTTTGCCAATCTGAGCGTTGGTGATTCTGCGGCTGTAGCGGCGGATTCCGGTGCCGGAAAGAAAGAGGAGAAGGGCGGTGTGGATTTGGATGCCGGAGAGGCGGATGCGGTTGGGGTTGGTAATGTGGTTGAGTCGAGTAATGTGATCAATGGTTCGGCGGAGGGGGCGGTGGAGTCCAGCAATGATGGGGCGGGTGCCGAATTGAAGCCGGATTCAGATTCGGTGGTGAGCAAGAGTAATGATTCCGGGGTTTCGGGGGTTAAGGAGGTGGATTGGGGTTTGTTTTATGCCAATTCGGCTCAGAATGGGATCCATGGCTTTGGATCCTACTCGGATTTTTTCAATGAGTTGGGGGATGGCACTGGGGATTTTCCCGCCAAAGTGGAACACAATGTGGTATCCGGCAGTGAAGACTATGCAGCCAACAGTTTGACTGCGCAACCAAATGTGATATCCGGCGGTGCAGATTATACAGGCAATGGTTTGAGCAATTCGGTTAATAATAGCCAGCAGTATCAAGAGGTTCAAGCTTATGGAGCCTCTGGGGAAGAAAGCAAAAACGAGCCGGATGTAAACAGTACCGAGTATTGGGACACTCTGTATCCTGGGTGGAAGTATGACCCCAACACAGGGCAATGGTACGAGGTGGACAGTTTCGATGGAGCTGCTAATTGGACCACCGTTACTGATACTAAACAGGAGATTTCGTATTTGCAGCAAACAGCTCACTCTGCTGCCGGAACTGTGACTGAAGCTAGCACTACTGGTTGTTTGTCTAGCTGGGAACAGGTCTCACAAGGGACTAATGGGTACCCGGAACATATGGTTTTTTATCCTGATCACCCTGATTGGTACTACGACACAATTGCCCAGGAGTGGCGTTCATTGGAAGCATATAATGCTTCTATGCAACCCACGGCCACAACGGCAGCTCAGGCCCAGAATGAGAATAGTTTATATCATGAGTATGGACAAGCTGAAAATTATGGGTCACAAGGTGTCAGTAACCAAGGTCAAGAGGGTAGCTGGTCTCAGTCTTATAATAATTACAATCAGCAAGTTTCAAATATGTGGCAACCTGAGGCTGTAGCTACCAGCGAGTCTTTTCCAAGTTTTGGTGGAAACCAACAGTTGGGTAATTCATTAGCTTCTATGGTTAACAAGGATCAGCAGAAGTTCGGAGCAGTTCCTTTGTATAACAAAGCAAGTCAGGGTCATGGTGAGGCTAATGGGACTGTTGGGTTCCAAAGTTTTGCCCCAGGTGGAAACTTTAACCAGCAGTTTAATCAAGGAAATGCAAAGCAGAATGAACAAACCCAATTTTCAGAGGATTACTATGGCAGTCAGAAACCTGTAAATTATTCGCAACAATCTTTCCAGAGTGGCAATCAGTTTACATATGCTCCAACTGTTGGAAGATCTTCTGCCGGGCGTCCTCCACATGCCCTAGTAACTTTTGGATTTGGTGGAAAACTCATTGTGATGAAGGACAGTAGTAATCTTGGGAACTCTTCCTATGGAAGCCAGGATCCTGTAGCGGGCTCAGTTTCTGTTCTGAACTTGACAGAAGTTTTCATGCAAAAGCCTGATGCTTCAAGTTTTGGAATGACTACTTGTGATTATTTTCGTGCCTTGTGCCAACAGTCCTTTCCAGGGCCGTTGGTTGGAGGGAATGTTGGAAGTAAAGAGTTGAACAAATGGATTGATGAAAGGATTGCTTACTGTGAATCACCCGACATGGACTATAGGAAAGGAAAAGTATTGAGGTTACTAATTTCTTTGCTTAAGATAGCTTGTCAACACTATGGAAAACTCCGATCTCCTTTTGGTACCGACACTCTATCCAAGGAAAATGATATTCCAGAATCCGCAGTTGCTAAGCTTTTTGCATCTGCAAAGAGCAATGGTGCACAGCTCGGTGAGTATAATGCTCTTAGCCACTGTGTGCAGAACATCCCTTCAGAAGGACAAATAGAGGCAACTGCTTCTGAAGTACAAAATCTACTGGTTTCTGGTAGAAAGAAAGAGGCTTTACAATGTGCACAGGCAGGTCAATTGTGGGGGCCAGCGCTTGTTCTTGCTTCACAGCTTGGCGAACAGTTATATGTTGATACTGTTAAGCAGATGGCAGTATGCCAGTTAATTCCAGGATCACCTTTGCGAACATTATGCCTGCTAATTGCAGGCCAACCTGCGGAAGTGTTTTCTGCTGACACTACATCTGAAATCAGTGTTCCTGGTGCTGTTAATATGCCTCAACAGCCTGTGCAGTTTGGTTCAAATACAATGCTTGATGATTGGGAGGAGAATTTAGCTGTGATAACTGCAAACAGAACGAAAGATGATGAACTGGTAATCATTCATCTTGGAGATACCTTGTGGAAGGATAGGAGTGAGATTACTGCAGCACACATCTGCTATTTAATTGCAGAAGCAAATTTTGAGTCATACTCAGATACTGCAAGACTATGTCTAATTGGAGCAGATCACTGGAAATTGCCTCGAACATATGCTAGCCCAGAGGCCATTCAGAGGACTGAGTTATATGAATATTCAAAAGTGCTCGGAAACTCTCAGTTTATTCTTCTACCATTCCAGCCATATAAGCTCATATATGCACACATGCTTGCTGAAGTTGGAAGAGTTTCTGATTCGTTGAAGTACTGTCAAATAATATTGAAGTCCTTAAAAACTGTTAGAGCACCTGAAGTGGAAACGTGGAAGCAGCTAGTATTGTCTCTAGAGGAGAGGATCAGAACTCATCAGCAGGGTGGATACTCTGTCAATCTGGTTTCTACTTTCAAAGGTAAATTGCTCAACTTTATCGATAATACTGCCCATCGTGTTGTTGGGAGCCTACCACCACCTGCACCATCCACATCCCAAGGAAGTGTTCACGGTAATCATTACCAACAGCCAATGGGTCCTAGAGTATCTAGTAGTCAATCAACTATGGCAATGTCATCCTTAATTCCATCTGCTTCTATGGAACCCATAAGTGATTTTGGCAATAGAAAGCCGATGCATAATAGAAGTGTTTCAGAGCCAGACTTTGGCAGAACTCAGGTTGATTCATCAAAGGAAATGGCCTCGTCTGATGGACAGGGAAAAGCCTCAGGAGGGACTTCCCGCTTTTCTCGTTTTGGTTTTGGGTCTCAGCTGTTGCAAAAGACTGTGGGCCTAGTCCTGAGACCTCGCCCTGGAAAACAGGTAGTTCGTGAAGTTTCTATTGTAGGCTTTCCTTCCTTTTTCCATCTAGAGAAGAACTATGGGTATTTTTCTTATGGAAAACTTTCTGTAATTCTGCTCTGCACTTGCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1160

Amino Acids

125.33

Weight (kDa)

4.77

Isoelectric Point (pI)

37.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec16 PF12932 534 - 656 1.7e-21 Vesicle coat trafficking protein Sec16 mid-region
TPR_Sec16 PF12931 718 - 977 6.1e-52 Sec16 Sec23-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1200
AarI CACCTGC 1 cut(s) 3034
Acc16I TGCGCA 1 cut(s) 597
Acc36I ACCTGC 3 cut(s) 2198, 2359, 3034
Acc65I GGTACC 2 cut(s) 969, 1988
AccB1I GGYRCC 4 cut(s) 209, 353, 969, 1988
AccB7I CCANNNNNTGG 4 cut(s) 1274, 1291, 1571, 3212
AccII CGCG 1 cut(s) 104
AclWI GGATC 9 cut(s) 463, 476, 477, 490, 1332, 1682, 1695, 2317, 2918
AcoI YGGCCR 2 cut(s) 99, 1077
AcsI RAATTY 2 cut(s) 2467, 2596
AcuI CTGAAG 5 cut(s) 930, 2103, 2169, 2811, 2886
AcyI GRCGYC 2 cut(s) 150, 1591
AdeI CACNNNGTG 3 cut(s) 553, 1157, 2104
AfaI GTAC 7 cut(s) 739, 800, 971, 1013, 1990, 2154, 2822
AfeI AGCGCT 1 cut(s) 2229
AflII CTTAAG 1 cut(s) 1943
AjnI CCWGG 8 cut(s) 763, 1029, 1417, 1683, 1810, 2305, 2395, 3358
AjuI GAANNNNNNNTTGG 4 cut(s) 1791, 1823, 3036, 3068
Alw21I GWGCWC 4 cut(s) 2071, 2203, 2724, 2863
Alw26I GTCTC 5 cut(s) 955, 1194, 2901, 3318, 3343
Alw44I GTGCAC 2 cut(s) 2067, 2199
AlwI GGATC 9 cut(s) 463, 476, 477, 490, 1332, 1682, 1695, 2317, 2918
AlwNI CAGNNNCTG 2 cut(s) 1709, 2618
Aor51HI AGCGCT 1 cut(s) 2229
AoxI GGCC 9 cut(s) 99, 1077, 1095, 1814, 2222, 2344, 2682, 3246, 3337
ApaLI GTGCAC 2 cut(s) 2067, 2199
ApeKI GCWGC 7 cut(s) 578, 824, 874, 893, 1088, 2564, 2884
ApoI RAATTY 2 cut(s) 2467, 2596
ArsI GACNNNNNNTTYG 2 cut(s) 2588, 2620
Asp700I GAANNNNTTC 5 cut(s) 139, 1579, 2803, 3196, 3451
Asp718I GGTACC 2 cut(s) 969, 1988
AspLEI GCGC 2 cut(s) 598, 2230
AspS9I GGNCC 7 cut(s) 116, 834, 1096, 1814, 2222, 3083, 3337
AsuC2I CCSGG 3 cut(s) 406, 974, 1588
AsuHPI GGTGA 7 cut(s) 191, 397, 992, 1391, 1881, 2090, 2304
AsuII TTCGAA 1 cut(s) 8
AsuNHI GCTAGC 2 cut(s) 914, 2672
AvaII GGWCC 3 cut(s) 116, 834, 3083
AxyI CCTNAGG 2 cut(s) 1239, 3274
BaeGI GKGCMC 2 cut(s) 2071, 2203
BamHI GGATCC 3 cut(s) 468, 482, 1687
BanI GGYRCC 4 cut(s) 209, 353, 969, 1988
BanII GRGCYC 1 cut(s) 1703
BbsI GAAGAC 1 cut(s) 576
Bbv12I GWGCWC 4 cut(s) 2071, 2203, 2724, 2863
BbvI GCAGC 7 cut(s) 590, 811, 880, 886, 1100, 2576, 2896
BccI CCATC 9 cut(s) 338, 509, 812, 2278, 3006, 3040, 3142, 3251, 3420
BceAI ACGGC 4 cut(s) 70, 1092, 1101, 1801
BcgI CGANNNNNNTGC 8 cut(s) 806, 840, 1007, 1041, 2310, 2344, 2975, 3009
BciT130I CCWGG 8 cut(s) 765, 1031, 1419, 1685, 1812, 2307, 2397, 3360
BciVI GTATCC 4 cut(s) 28, 568, 771, 2927
BclI TGATCA 2 cut(s) 303, 997
BcnI CCSGG 3 cut(s) 406, 974, 1588
BcoDI GTCTC 5 cut(s) 955, 1194, 2901, 3318, 3343
BfmI CTRYAG 5 cut(s) 192, 1245, 1692, 1903, 2562
BfoI RGCGCY 1 cut(s) 2231
BfrI CTTAAG 1 cut(s) 1943
BfuAI ACCTGC 3 cut(s) 2198, 2359, 3034
BfuI GTATCC 4 cut(s) 28, 568, 771, 2927
BglI GCCNNNNNGGC 3 cut(s) 257, 455, 1085
BglII AGATCT 1 cut(s) 1577
BlpI GCTNAGC 1 cut(s) 2037
BmcAI AGTACT 1 cut(s) 2822
Bme18I GGWCC 3 cut(s) 116, 834, 3083
BmgT120I GGNCC 7 cut(s) 116, 834, 1096, 1814, 2222, 3083, 3337
BmrI ACTGGG 1 cut(s) 531
BmsI GCATC 5 cut(s) 238, 253, 1738, 2057, 3171
BmtI GCTAGC 2 cut(s) 918, 2676
BmuI ACTGGG 1 cut(s) 531
BpiI GAAGAC 1 cut(s) 576
BplI GAGNNNNNCTC 2 cut(s) 2594, 2626
Bpu10I CCTNAGC 1 cut(s) 1092
Bpu1102I GCTNAGC 1 cut(s) 2037
Bpu14I TTCGAA 1 cut(s) 8
BpuMI CCSGG 3 cut(s) 406, 974, 1588
Bsa29I ATCGAT 1 cut(s) 2985
BsaHI GRCGYC 2 cut(s) 150, 1591
BsaI GGTCTC 4 cut(s) 955, 1194, 3318, 3343
BsaWI WCCGGW 1 cut(s) 206
BsaXI ACNNNNNCTCC 6 cut(s) 851, 881, 1546, 1576, 1818, 1848
Bse1I ACTGG 6 cut(s) 526, 928, 2169, 2296, 2514, 2654
Bse21I CCTNAGG 2 cut(s) 1239, 3274
Bse3DI GCAATG 5 cut(s) 346, 643, 800, 2068, 3123
BseBI CCWGG 8 cut(s) 765, 1031, 1419, 1685, 1812, 2307, 2397, 3360
BseCI ATCGAT 1 cut(s) 2985
BseGI GGATG 9 cut(s) 46, 253, 268, 520, 733, 2112, 3032, 3038, 3122
BseMI GCAATG 5 cut(s) 346, 643, 800, 2068, 3123
BseNI ACTGG 6 cut(s) 526, 928, 2169, 2296, 2514, 2654
BseRI GAGGAG 4 cut(s) 6, 239, 2477, 2918
BseSI GKGCMC 2 cut(s) 2071, 2203
BseX3I CGGCCG 1 cut(s) 99
BseXI GCAGC 7 cut(s) 590, 811, 880, 886, 1100, 2576, 2896
BseYI CCCAGC 1 cut(s) 939
BsgI GTGCAG 5 cut(s) 642, 2126, 2447, 3012, 3454
Bsh1236I CGCG 1 cut(s) 104
Bsh1285I CGRYCG 1 cut(s) 102
BshFI GGCC 9 cut(s) 101, 1079, 1097, 1816, 2224, 2346, 2684, 3248, 3339
BshNI GGYRCC 4 cut(s) 209, 353, 969, 1988
BshVI ATCGAT 1 cut(s) 2985
BsiEI CGRYCG 1 cut(s) 102
BsiHKAI GWGCWC 4 cut(s) 2071, 2203, 2724, 2863
BslFI GGGAC 5 cut(s) 129, 764, 973, 1405, 3295
BsmAI GTCTC 5 cut(s) 955, 1194, 2901, 3318, 3343
BsmFI GGGAC 5 cut(s) 129, 764, 973, 1405, 3295
BsnI GGCC 9 cut(s) 101, 1079, 1097, 1816, 2224, 2346, 2684, 3248, 3339
Bso31I GGTCTC 4 cut(s) 955, 1194, 3318, 3343
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 5 cut(s) 1703, 2071, 2203, 2724, 2863
Bsp1720I GCTNAGC 1 cut(s) 2037
Bsp19I CCATGG 1 cut(s) 472
BspANI GGCC 9 cut(s) 101, 1079, 1097, 1816, 2224, 2346, 2684, 3248, 3339
BspDI ATCGAT 1 cut(s) 2985
BspFNI CGCG 1 cut(s) 104
BspHI TCATGA 1 cut(s) 1120
BspMAI CTGCAG 1 cut(s) 2566
BspMI ACCTGC 3 cut(s) 2198, 2359, 3034
BspOI GCTAGC 2 cut(s) 918, 2676
BspPI GGATC 9 cut(s) 463, 476, 477, 490, 1332, 1682, 1695, 2317, 2918
BspT104I TTCGAA 1 cut(s) 8
BspT107I GGYRCC 4 cut(s) 209, 353, 969, 1988
BspTI CTTAAG 1 cut(s) 1943
BspTNI GGTCTC 4 cut(s) 955, 1194, 3318, 3343
BsrDI GCAATG 5 cut(s) 346, 643, 800, 2068, 3123
BsrI ACTGG 6 cut(s) 526, 928, 2169, 2296, 2514, 2654
BssNI GRCGYC 2 cut(s) 150, 1591
BssT1I CCWWGG 5 cut(s) 153, 472, 1168, 2004, 3043
Bst2UI CCWGG 8 cut(s) 765, 1031, 1419, 1685, 1812, 2307, 2397, 3360
Bst6I CTCTTC 2 cut(s) 1675, 2794
BstACI GRCGYC 2 cut(s) 150, 1591
BstAFI CTTAAG 1 cut(s) 1943
BstAPI GCANNNNNTGC 1 cut(s) 1058
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 8 cut(s) 668, 916, 1699, 2226, 2333, 2344, 2674, 2787
BstDSI CCRYGG 3 cut(s) 102, 472, 1074
BstENI CCTNNNNNAGG 1 cut(s) 2121
BstF5I GGATG 9 cut(s) 46, 253, 268, 520, 733, 2112, 3032, 3038, 3122
BstFNI CGCG 1 cut(s) 104
BstH2I RGCGCY 1 cut(s) 2231
BstHHI GCGC 2 cut(s) 598, 2230
BstMAI GTCTC 5 cut(s) 955, 1194, 2901, 3318, 3343
BstMCI CGRYCG 1 cut(s) 102
BstNI CCWGG 8 cut(s) 765, 1031, 1419, 1685, 1812, 2307, 2397, 3360
BstNSI RCATGY 2 cut(s) 1604, 2785
BstSFI CTRYAG 5 cut(s) 192, 1245, 1692, 1903, 2562
BstSLI GKGCMC 2 cut(s) 2071, 2203
BstUI CGCG 1 cut(s) 104
BstV1I GCAGC 7 cut(s) 590, 811, 880, 886, 1100, 2576, 2896
BstV2I GAAGAC 1 cut(s) 576
BstX2I RGATCY 4 cut(s) 468, 482, 1577, 1687
BstXI CCANNNNNNTGG 1 cut(s) 479
BstYI RGATCY 4 cut(s) 468, 482, 1577, 1687
BstZI CGGCCG 1 cut(s) 99
Bsu15I ATCGAT 1 cut(s) 2985
Bsu36I CCTNAGG 2 cut(s) 1239, 3274
BsuI GTATCC 4 cut(s) 28, 568, 771, 2927
BsuRI GGCC 9 cut(s) 101, 1079, 1097, 1816, 2224, 2346, 2684, 3248, 3339
BsuTUI ATCGAT 1 cut(s) 2985
BtgI CCRYGG 3 cut(s) 102, 472, 1074
BtsCI GGATG 9 cut(s) 46, 253, 268, 520, 733, 2112, 3032, 3038, 3122
BtsI GCAGTG 1 cut(s) 571
BtsIMutI CAGTG 5 cut(s) 519, 571, 2098, 2395, 2647
BveI ACCTGC 3 cut(s) 2198, 2359, 3034
Cac8I GCNNGC 8 cut(s) 668, 916, 1699, 2226, 2333, 2344, 2674, 2787
CaiI CAGNNNCTG 2 cut(s) 1709, 2618
CciI TCATGA 1 cut(s) 1120
CciNI GCGGCCGC 1 cut(s) 99
CfoI GCGC 2 cut(s) 598, 2230
Cfr13I GGNCC 7 cut(s) 116, 834, 1096, 1814, 2222, 3083, 3337
Cfr42I CCGCGG 1 cut(s) 105
ClaI ATCGAT 1 cut(s) 2985
CseI GACGC 2 cut(s) 158, 1580
Csp6I GTAC 7 cut(s) 738, 799, 970, 1012, 1989, 2153, 2821
CviAII CATG 7 cut(s) 473, 1121, 1376, 1601, 1735, 1897, 2782
CviQI GTAC 7 cut(s) 738, 799, 970, 1012, 1989, 2153, 2821
DraIII CACNNNGTG 3 cut(s) 553, 1157, 2104
EaeI YGGCCR 2 cut(s) 99, 1077
EagI CGGCCG 1 cut(s) 99
Eam1104I CTCTTC 2 cut(s) 1675, 2794
EarI CTCTTC 2 cut(s) 1675, 2794
EciI GGCGGA 3 cut(s) 215, 275, 332
EclXI CGGCCG 1 cut(s) 99
Eco130I CCWWGG 5 cut(s) 153, 472, 1168, 2004, 3043
Eco24I GRGCYC 1 cut(s) 1703
Eco31I GGTCTC 4 cut(s) 955, 1194, 3318, 3343
Eco32I GATATC 1 cut(s) 612
Eco47I GGWCC 3 cut(s) 116, 834, 3083
Eco47III AGCGCT 1 cut(s) 2229
Eco52I CGGCCG 1 cut(s) 99
Eco57I CTGAAG 5 cut(s) 930, 2103, 2169, 2811, 2886
Eco81I CCTNAGG 2 cut(s) 1239, 3274
EcoNI CCTNNNNNAGG 1 cut(s) 2121
EcoO109I RGGNCCY 2 cut(s) 116, 3083
EcoRII CCWGG 8 cut(s) 763, 1029, 1417, 1683, 1810, 2305, 2395, 3358
EcoRV GATATC 1 cut(s) 612
EcoT14I CCWWGG 5 cut(s) 153, 472, 1168, 2004, 3043
EcoT22I ATGCAT 1 cut(s) 3186
EcoT38I GRGCYC 1 cut(s) 1703
ErhI CCWWGG 5 cut(s) 153, 472, 1168, 2004, 3043
FaeI CATG 7 cut(s) 476, 1124, 1379, 1604, 1738, 1900, 2785
FalI AAGNNNNNCTT 2 cut(s) 1861, 1893
FaqI GGGAC 5 cut(s) 129, 764, 973, 1405, 3295
FatI CATG 7 cut(s) 472, 1120, 1375, 1600, 1734, 1896, 2781
FauI CCCGC 5 cut(s) 106, 343, 541, 1690, 3296
FauNDI CATATG 3 cut(s) 981, 1558, 2668
FbaI TGATCA 2 cut(s) 303, 997
FokI GGATG 9 cut(s) 53, 260, 275, 527, 740, 2099, 3019, 3025, 3109
FriOI GRGCYC 1 cut(s) 1703
FspI TGCGCA 1 cut(s) 597
GlaI GCGC 2 cut(s) 597, 2229
GsaI CCCAGC 1 cut(s) 943
HaeII RGCGCY 1 cut(s) 2231
HaeIII GGCC 9 cut(s) 101, 1079, 1097, 1816, 2224, 2346, 2684, 3248, 3339
HgaI GACGC 2 cut(s) 158, 1580
HhaI GCGC 2 cut(s) 598, 2230
Hin1I GRCGYC 2 cut(s) 150, 1591
Hin1II CATG 7 cut(s) 476, 1124, 1379, 1604, 1738, 1900, 2785
Hin6I GCGC 2 cut(s) 596, 2228
HinP1I GCGC 2 cut(s) 596, 2228
HincII GTYRAC 2 cut(s) 1318, 1958
HindII GTYRAC 2 cut(s) 1318, 1958
HindIII AAGCTT 2 cut(s) 687, 2039
HpaI GTTAAC 1 cut(s) 1318
HphI GGTGA 7 cut(s) 191, 397, 992, 1391, 1881, 2090, 2304
Hpy166II GTNNAC 8 cut(s) 733, 808, 1318, 1554, 1958, 2069, 2201, 3055
Hpy8I GTNNAC 8 cut(s) 733, 808, 1318, 1554, 1958, 2069, 2201, 3055
Hpy99I CGWCG 5 cut(s) 91, 94, 97, 149, 152
HpyAV CCTTC 6 cut(s) 223, 1639, 2117, 2127, 2536, 3411
HpyCH4IV ACGT 1 cut(s) 2876
HpySE526I ACGT 1 cut(s) 2876
Hsp92I GRCGYC 2 cut(s) 150, 1591
Hsp92II CATG 7 cut(s) 476, 1124, 1379, 1604, 1738, 1900, 2785
HspAI GCGC 2 cut(s) 596, 2228
KflI GGGWCCC 1 cut(s) 116
KpnI GGTACC 2 cut(s) 973, 1992
Ksp22I TGATCA 2 cut(s) 303, 997
KspAI GTTAAC 1 cut(s) 1318
KspI CCGCGG 1 cut(s) 105
LmnI GCTCC 6 cut(s) 695, 821, 1340, 1567, 2639, 3012
Lsp1109I GCAGC 7 cut(s) 590, 811, 880, 886, 1100, 2576, 2896
LweI GCATC 5 cut(s) 238, 253, 1738, 2057, 3171
MaeII ACGT 1 cut(s) 2876
MaeIII GTNAC 6 cut(s) 841, 904, 1149, 1163, 1609, 1926
MboII GAAGA 9 cut(s) 80, 581, 719, 1572, 1587, 1662, 2735, 2811, 3433
MfeI CAATTG 2 cut(s) 1023, 2213
MflI RGATCY 4 cut(s) 468, 482, 1577, 1687
MhlI GDGCHC 5 cut(s) 1703, 2071, 2203, 2724, 2863
MlyI GAGTC 4 cut(s) 299, 341, 1268, 2612
MmeI TCCRAC 6 cut(s) 168, 1552, 1589, 1804, 1816, 2776
Mph1103I ATGCAT 1 cut(s) 3186
MroXI GAANNNNTTC 5 cut(s) 139, 1579, 2803, 3196, 3451
MslI CAYNNNNRTG 2 cut(s) 1125, 1640
MspA1I CMGCKG 2 cut(s) 104, 3319
MspCI CTTAAG 1 cut(s) 1943
MunI CAATTG 2 cut(s) 1023, 2213
MvaI CCWGG 8 cut(s) 765, 1031, 1419, 1685, 1812, 2307, 2397, 3360
MvnI CGCG 1 cut(s) 104
NciI CCSGG 3 cut(s) 406, 974, 1588
NcoI CCATGG 1 cut(s) 472
NdeI CATATG 3 cut(s) 981, 1558, 2668
NheI GCTAGC 2 cut(s) 914, 2672
NlaIII CATG 7 cut(s) 476, 1124, 1379, 1604, 1738, 1900, 2785
NmuCI GTSAC 2 cut(s) 904, 1149
NotI GCGGCCGC 1 cut(s) 99
NsbI TGCGCA 1 cut(s) 597
NsiI ATGCAT 1 cut(s) 3186
NspI RCATGY 2 cut(s) 1604, 2785
NspV TTCGAA 1 cut(s) 8
PagI TCATGA 1 cut(s) 1120
PaqCI CACCTGC 1 cut(s) 3034
PdmI GAANNNNTTC 5 cut(s) 139, 1579, 2803, 3196, 3451
PflFI GACNNNGTC 1 cut(s) 2628
PflMI CCANNNNNTGG 4 cut(s) 1274, 1291, 1571, 3212
PfoI TCCNGGA 1 cut(s) 2305
PleI GAGTC 4 cut(s) 298, 340, 1267, 2611
PpsI GAGTC 4 cut(s) 298, 340, 1267, 2611
PpuMI RGGWCCY 2 cut(s) 116, 3083
PsiI TTATAA 1 cut(s) 1200
Psp5II RGGWCCY 2 cut(s) 116, 3083
Psp6I CCWGG 8 cut(s) 763, 1029, 1417, 1683, 1810, 2305, 2395, 3358
PspFI CCCAGC 1 cut(s) 939
PspGI CCWGG 8 cut(s) 763, 1029, 1417, 1683, 1810, 2305, 2395, 3358
PspPI GGNCC 7 cut(s) 116, 834, 1096, 1814, 2222, 3083, 3337
PspPPI RGGWCCY 2 cut(s) 116, 3083
PstI CTGCAG 1 cut(s) 2566
PstNI CAGNNNCTG 2 cut(s) 1709, 2618
PsuI RGATCY 4 cut(s) 468, 482, 1577, 1687
PsyI GACNNNGTC 1 cut(s) 2628
PvuII CAGCTG 1 cut(s) 3319
RsaI GTAC 7 cut(s) 739, 800, 971, 1013, 1990, 2154, 2822
RsaNI GTAC 7 cut(s) 738, 799, 970, 1012, 1989, 2153, 2821
RseI CAYNNNNRTG 2 cut(s) 1125, 1640
SacII CCGCGG 1 cut(s) 105
Sau96I GGNCC 7 cut(s) 116, 834, 1096, 1814, 2222, 3083, 3337
ScaI AGTACT 1 cut(s) 2822
SchI GAGTC 4 cut(s) 299, 341, 1268, 2612
SduI GDGCHC 5 cut(s) 1703, 2071, 2203, 2724, 2863
SfaNI GCATC 5 cut(s) 238, 253, 1738, 2057, 3171
SfcI CTRYAG 5 cut(s) 192, 1245, 1692, 1903, 2562
Sfr303I CCGCGG 1 cut(s) 105
SfuI TTCGAA 1 cut(s) 8
SgrBI CCGCGG 1 cut(s) 105
SinI GGWCC 3 cut(s) 116, 834, 3083
SmiMI CAYNNNNRTG 2 cut(s) 1125, 1640
SmlI CTYRAG 1 cut(s) 1943
SmoI CTYRAG 1 cut(s) 1943
SspI AATATT 2 cut(s) 2711, 2835
StyI CCWWGG 5 cut(s) 153, 472, 1168, 2004, 3043
TaiI ACGT 1 cut(s) 2879
TaqI TCGA 7 cut(s) 8, 66, 78, 293, 816, 2662, 2985
TatI WGTACW 2 cut(s) 2152, 2820
TauI GCSGC 5 cut(s) 101, 104, 107, 191, 200
TscAI CASTG 5 cut(s) 526, 571, 2105, 2395, 2654
TseFI GTSAC 2 cut(s) 904, 1149
TseI GCWGC 7 cut(s) 578, 824, 874, 893, 1088, 2564, 2884
Tsp45I GTSAC 2 cut(s) 904, 1149
TspGWI ACGGA 1 cut(s) 53
TspRI CASTG 5 cut(s) 526, 571, 2105, 2395, 2654
Tth111I GACNNNGTC 1 cut(s) 2628
Van91I CCANNNNNTGG 4 cut(s) 1274, 1291, 1571, 3212
Vha464I CTTAAG 1 cut(s) 1943
VneI GTGCAC 2 cut(s) 2067, 2199
VpaK11BI GGWCC 3 cut(s) 116, 834, 3083
XagI CCTNNNNNAGG 1 cut(s) 2121
XapI RAATTY 2 cut(s) 2467, 2596
XbaI TCTAGA 2 cut(s) 2899, 3415
XceI RCATGY 2 cut(s) 1604, 2785
XcmI CCANNNNNNNNNTGG 1 cut(s) 3005
XmnI GAANNNNTTC 5 cut(s) 139, 1579, 2803, 3196, 3451
ZrmI AGTACT 1 cut(s) 2822
Zsp2I ATGCAT 1 cut(s) 3186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.