RLG00000003530

Protein transport protein sec16

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
49726083 .. 49734213
8131 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003530

Sequence Viewer

Length: 4191 bp
ATGGCTTCGAATCCTCCTCCATTTCAGGTGGAGGATACGGATGAGGATTTCTTTGATAAATTGGTCGAAGATGACCTCGAACCGCCGTCGTCTTCGGGGGCCGCGGCGGTGGCGGGACCCAATTTGAATGAGGGAAGTGATTCCGACGACGCCAAGGCGTTTGCTAATCTGAGCTTTGGTGATTCTGCGGCTGTAGCGGCGGATTCCGGTGCCGGAAAGAAAGAGGAGAAGGGCGGTGTGGATTCGGATGCCGGAGAGGCGGATGCGGTTGGGGTTGGTAATGTGGTTGAGTCGAGTAATGTGATCAATGGTTCCGCGGAGGGGGCGGTGGAGTCCAGCAATGATGGGGCGGGTGCCGAATTGAAGCCGGATTCGGATTCGGTGGTGAGCAAGAGTACTGATTCCGGGGTTAAGGAGGTGGATTGGGGTTTGTTTTATGCCAATTCGGCTCAGAATGGGATCCATGGCTTTGGATCCTACTCGGATTTTTTCAATGAGTTGGGAGATGGCACTGGGGATTTTCCCGCCAAAGTGGAACACAATGTGGTATCGGGCAGTGAAGATTATACAGCCAACAGTTTGACTGCGCAACCAAATGTGATATCCGGCGGTGCAGATTATACAGCCAATGGTTTGAGCAATTCGGTTAATAATAGCCAGCAGTATCAAGAGGTTCAAGCTTATGGAGCCTGTGGGGAAGAAAGCAAAAACGAGCCGGATGTAAACAGTACCGAGTATTGGGACAGTCTGTATCCTGGGTGGAAGTATGACCCCAACACAGGGCAATGGTATGAGGTGGACAGTTTCGATGGAGCTGCTAATTGGACCACCGTTACTGATACTAAACAGGGAGTTTCGTATTTGCAGCAAACAGCTCACTCTGCTGCCGGAACTGTGACTGAAGCTAGCACTACTGGTTGTTTGTCTAGCTGGGAACAGGTCTCACAAGGGACTAATGGGTACCCGGAACATATGGTTTTTTATCCTGATCACCCTGATTGGTACTACGACACAATTGCCCAGGAGTGGCGTTCATTGGAAGCATATAATGCTTCTGTGCAACCCACGGCCACAACGGCAGCTCAGGCCCAGAATGAGAATAGTTTATATCATGAGTATGGACAAGCTGAAAATTATGGGTCACAAGGTGTCAGTAACCAAGGTCAAGAGGGTAGCTGGTCTCAGTCTTATAATAATTACAATCAGCAAGTTTCAAATATGTGGCAACCTGAGGCTGTAGCTACCAGCGAGTCTTTTCCAAGTTTTGGTGGAAACCAACAGTTGGGTAATTCATTAGCTTCTACGGTTAACAAGGATCAGCAGAAGTTCGGAGCAGTTCCTTTGTATAACAAAGCAAGTGAGGGTCATGGTGAGGCTAATGGGACTGTTGGGTTCCAAAGTTTCACCCCAGGTGGAAACTTTAACCAGCAGTTTAATCAAGGAAATGCAAAGCAGAATGAACAAACCCAATTTTCAGAGGATTACTATGGCAGTCAGAAACCTGTAAATTATTCGCAACAATCTTTCCAGAGTGGCAATCAGTTTACATATGCTCCAACTGTTGGAAGATCTTCTGCCGGGCGTCCTCCACATGCCTTAGTAACTTTTGGATTTGGTGGAAAACTCATTGTGATGAAGGACAGTAGTAGTCTTGGGAACTCTTCCTATGGAAGCCAGGATCCTGTAGCGGGCTCAGTTTCTGTTCTGAACTTGACAGAAGTTTTCATGCAAAAGCCTGATGCTTCAAGTTTTGGAATGACTACTTGTGATTATTTTCGTGCCTTGTGCCAACAGTCCTTTCCAGGGCCGTTGGTTGGAGGGAATGTTGGAAGTAAAGAGTTGAACAAATGGATTGATGAAAGGATTGCTTACTGTGAATCACCTGACATGGACTATAGGAAAGGAAAAGTATTGAGGTTACTTATTTCTTTGCTTAAGATAGCTTGTCAACACTATGGAAAACTCCGATCTCCTTTTGGTACCGACACTCTATCCAAGGAAAATGATATTCCAGAATCTGCAGTTGCTAAGCTTTTTGCATCTGCAAAGAGCAATGGTGCACAACTCGGTGAGTATAATGCTCTTAGCCACTGTGTGCAGAACATCCCTTCAGAAGGACAAATACAGGCAACTGCTTCTGAAGTACAAAATCTACTGGTTTCTGGTAGAAAGAAAGAGGCTTTACAATGTGCACAGGCAGGTCAATTGTGGGGGCCAGCGCTTGTTCTTGCTTCACAGCTTGGCGAACAGTTATATGTTGATACTGTTAAGCAGATGGCAGTATGCCAGTTAATTCCAGGATCACCTTTGCGAACATTATGCCTGCTAATTGCAGGCCAACCTGCGGAAGTGTTTTCTGCTGACACTACATCTGAAATCAGTGTTCCTGGTGCTGTTAATATGCCTCAACAGCCTGTGCAGTTTGGTTCAAATACAATGCTTGATGATTGGGAGGAGAATTTAGCTGTGATAACTGCAAACAGAACGAAAGATGATGAACTGGTAATCATTCATCTTGGAGATACCTTGTGGAAGGATAGGAGTGAGATTACTGCAGCACACATCTGCTATTTAATTGCAGAAGCAAATTTTGAGTCATACTCAGATACTGCAAGACTATGTCTAATTGGAGCAGATCACTGGAAATTGCCTCGAACGTATGCTAGCCCAGAGGCCATTCAGAGGACTGAGTTATATGAATATTCGAAGGTGCTCGGAAACTCTCAGTTTATTCTTCTACCATTCCAGCCATATAAGCTCATATATGCACACATGCTTGCTGAAGTTGGAAGAGTTTCTGATTCGTTGAAGTACTGTCAAATAATATTGAAGTCCTTAAAAACTGTTAGAGCACCTGAAGTGGAAACGTGGAAGCAGCTAGTATTGTCTCTAGAGGAGAGGATCAGAACTCATCAGCAGGGTGGATACTCTGTAAATCTGGTTTCTACTTTCAAAGGTAAATTGCTCAACTTTATTGATACTACTGCCCATCGTGTTGTTGGGAGCCTACCACCACCTGCACCATCCACATCCCAAGGAAGTGTTCACGGTAATCATTACCAACAGCCAATGGGTCCTAGAGTATCTAGTAGTCAATCAACTATGGCAATGTCATCCTTAATTCCTTCTGCTTCTATGGAACCCATAAGTGATTTTGGCAATAGAAAGCCGATGCATAATAGAAGTGTTTCAGAGCCGGACTTTGGCAGAACTCAGGTTGATTCATCAAAGGAAATGGCCTCGTCTGATGGACAGGGAAAAGCCTCAGGAGGGACTTCCCGCTTTTCTCGTTTTGGTTTTGGGTCTCAGCTGTTGCAAAAGACTGTGGGCCTAGTCCTGAGACCTCGCCCTGGAAAACAGGCTAAGTTGGGTGAAACAAATAAGTTCTACTATGACGAAAAACTGAAGAGATGGGTTGAGGAAGGTGCTGAACCTCCGGCCGAAGAACCTGCATTGCCTCCTCCCCCAACAACTGCAGTCTTCCAGAATGGTGTTTCTGATTACAACTTAAGGTCTGCTTTAAAGAGAGAAGGGGGGTCCCCCACTAAAGGGGGCCCAGATTTACGTACTTCAACTCCTCCAGGACCAACTTCAGGGACACCTCCCATTCCACCCAGCTCAAATCAATTCTCAGCTCGTGGACGAATGGGTATTAGATCCAGATATGTTGACACTTTCAACCAAGCTGGAGGAATGCCAGCAAACTTGTTCCAGTCACCTTCTGTTCCATCTACTAAGCCTGCTGTTGCTGCCAATGCAAAGTTTTTCATTCCCACTCCAGTGTTATCAGGTGACCAGACTATGGAGGCTATTGCCGAACATGTACAAGAAGATGCTACAACAACTAAAGAAGATCCTTCAACATCAGCCAGGAATGACTCTTTTCATGCTCCACCTTCATCATCACCAATGAGTATGCAAAGGTACCCAAGCATGAGTAATATCCAAAGCATGGGAGTTATGTCAAATGCCAATGGTCCCCTTCCAGCTCACTCACGAAGGACGGCATCATGGGGTGGGAGCTCCAATGATATATTTAACCCTCCAAAGACGGGAGAAATAAAACCTCTAGGGGAGGCATTATGCATGTCCCCTACTTTATATAGGCCTAGTGAGCCGCCTTCGCAAATGCATGCGCCAATGAATGGCGGCAGCAGTTTTGGTGACGATCTTCATGAAGTGGAACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1397

Amino Acids

150.12

Weight (kDa)

4.87

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec16 PF12932 531 - 653 1.1e-21 Vesicle coat trafficking protein Sec16 mid-region
TPR_Sec16 PF12931 715 - 974 8.9e-52 Sec16 Sec23-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1191
AarI CACCTGC 1 cut(s) 3025
Acc16I TGCGCA 1 cut(s) 588
Acc36I ACCTGC 4 cut(s) 2189, 2350, 3025, 3457
Acc65I GGTACC 3 cut(s) 960, 1979, 3924
AccB1I GGYRCC 5 cut(s) 209, 353, 960, 1979, 3924
AccB7I CCANNNNNTGG 6 cut(s) 1265, 1282, 1562, 3802, 3952, 4145
AccII CGCG 2 cut(s) 104, 317
AcoI YGGCCR 2 cut(s) 1068, 3438
AcsI RAATTY 2 cut(s) 2458, 2587
AcuI CTGAAG 7 cut(s) 921, 2094, 2160, 2802, 2877, 3425, 3576
AcyI GRCGYC 2 cut(s) 150, 1582
AdeI CACNNNGTG 3 cut(s) 544, 1148, 2095
AfeI AGCGCT 1 cut(s) 2220
AflII CTTAAG 2 cut(s) 1934, 3508
AflIII ACRYGT 1 cut(s) 3820
AjuI GAANNNNNNNTTGG 4 cut(s) 1782, 1814, 3027, 3059
AleI CACNNNNGTG 1 cut(s) 3779
Alw21I GWGCWC 5 cut(s) 2062, 2194, 2715, 2854, 4025
Alw26I GTCTC 5 cut(s) 946, 1185, 2892, 3309, 3334
Alw44I GTGCAC 2 cut(s) 2058, 2190
AlwNI CAGNNNCTG 3 cut(s) 1700, 2018, 2609
Aor51HI AGCGCT 1 cut(s) 2220
ApaI GGGCCC 1 cut(s) 3557
ApaLI GTGCAC 2 cut(s) 2058, 2190
ApeKI GCWGC 8 cut(s) 815, 865, 884, 1079, 2555, 2875, 3749, 4152
ApoI RAATTY 2 cut(s) 2458, 2587
ArsI GACNNNNNNTTYG 2 cut(s) 2579, 2611
Asp700I GAANNNNTTC 4 cut(s) 139, 1570, 2794, 3187
Asp718I GGTACC 3 cut(s) 960, 1979, 3924
AspLEI GCGC 3 cut(s) 589, 2221, 4138
AsuC2I CCSGG 3 cut(s) 406, 965, 1579
AsuII TTCGAA 2 cut(s) 8, 2705
AsuNHI GCTAGC 2 cut(s) 905, 2663
AvaII GGWCC 6 cut(s) 116, 825, 3074, 3537, 3584, 3977
AxyI CCTNAGG 2 cut(s) 1230, 3265
BaeGI GKGCMC 3 cut(s) 2062, 2194, 3557
BamHI GGATCC 3 cut(s) 459, 473, 1678
BanI GGYRCC 5 cut(s) 209, 353, 960, 1979, 3924
BanII GRGCYC 3 cut(s) 1694, 3557, 4025
BarI GAAGNNNNNNTAC 2 cut(s) 2106, 2138
BauI CACGAG 1 cut(s) 3636
BbsI GAAGAC 2 cut(s) 84, 3472
Bbv12I GWGCWC 5 cut(s) 2062, 2194, 2715, 2854, 4025
BbvI GCAGC 8 cut(s) 802, 871, 877, 1091, 2567, 2887, 3736, 4164
BccI CCATC 9 cut(s) 338, 500, 803, 2269, 2997, 3031, 3242, 3405, 3736
BceAI ACGGC 5 cut(s) 70, 1083, 1092, 1792, 4020
BcgI CGANNNNNNTGC 8 cut(s) 797, 831, 998, 1032, 2301, 2335, 3431, 3465
BciVI GTATCC 3 cut(s) 28, 762, 2918
BclI TGATCA 2 cut(s) 303, 988
BcnI CCSGG 3 cut(s) 406, 965, 1579
BcoDI GTCTC 5 cut(s) 946, 1185, 2892, 3309, 3334
BfmI CTRYAG 7 cut(s) 192, 1236, 1683, 1894, 2019, 2553, 3474
BfoI RGCGCY 1 cut(s) 2222
BfrI CTTAAG 2 cut(s) 1934, 3508
BfuAI ACCTGC 4 cut(s) 2189, 2350, 3025, 3457
BfuI GTATCC 3 cut(s) 28, 762, 2918
BglI GCCNNNNNGGC 3 cut(s) 257, 446, 1076
BglII AGATCT 1 cut(s) 1568
BlpI GCTNAGC 1 cut(s) 2028
BmcAI AGTACT 2 cut(s) 397, 2813
Bme18I GGWCC 6 cut(s) 116, 825, 3074, 3537, 3584, 3977
BmrI ACTGGG 1 cut(s) 522
BmsI GCATC 7 cut(s) 238, 253, 1729, 2048, 3162, 3823, 4016
BmtI GCTAGC 2 cut(s) 909, 2667
BmuI ACTGGG 1 cut(s) 522
BpiI GAAGAC 2 cut(s) 84, 3472
BplI GAGNNNNNCTC 2 cut(s) 2585, 2617
BpmI CTGGAG 3 cut(s) 3564, 3708, 3762
Bpu10I CCTNAGC 1 cut(s) 1083
Bpu1102I GCTNAGC 1 cut(s) 2028
Bpu14I TTCGAA 2 cut(s) 8, 2705
BpuMI CCSGG 3 cut(s) 406, 965, 1579
BsaAI YACGTR 1 cut(s) 3566
BsaHI GRCGYC 2 cut(s) 150, 1582
BsaI GGTCTC 4 cut(s) 946, 1185, 3309, 3334
BsaWI WCCGGW 1 cut(s) 206
BsaXI ACNNNNNCTCC 6 cut(s) 1537, 1567, 1809, 1839, 3559, 3589
Bse1I ACTGG 8 cut(s) 517, 919, 2160, 2287, 2505, 2645, 3712, 3779
Bse21I CCTNAGG 2 cut(s) 1230, 3265
Bse3DI GCAATG 5 cut(s) 346, 791, 2059, 3114, 3452
BseGI GGATG 8 cut(s) 46, 253, 268, 724, 2103, 3023, 3029, 3113
BseMI GCAATG 5 cut(s) 346, 791, 2059, 3114, 3452
BseNI ACTGG 8 cut(s) 517, 919, 2160, 2287, 2505, 2645, 3712, 3779
BseRI GAGGAG 6 cut(s) 6, 239, 2468, 2909, 3450, 3567
BseSI GKGCMC 3 cut(s) 2062, 2194, 3557
BseX3I CGGCCG 1 cut(s) 3438
BseXI GCAGC 8 cut(s) 802, 871, 877, 1091, 2567, 2887, 3736, 4164
BseYI CCCAGC 2 cut(s) 930, 3614
BsgI GTGCAG 4 cut(s) 633, 2117, 2438, 3003
Bsh1236I CGCG 2 cut(s) 104, 317
Bsh1285I CGRYCG 1 cut(s) 3441
BshNI GGYRCC 5 cut(s) 209, 353, 960, 1979, 3924
BsiEI CGRYCG 1 cut(s) 3441
BsiHKAI GWGCWC 5 cut(s) 2062, 2194, 2715, 2854, 4025
BslFI GGGAC 9 cut(s) 129, 755, 964, 1396, 3286, 3523, 3610, 3963, 4075
BsmAI GTCTC 5 cut(s) 946, 1185, 2892, 3309, 3334
BsmFI GGGAC 9 cut(s) 129, 755, 964, 1396, 3286, 3523, 3610, 3963, 4075
BsmI GAATGC 1 cut(s) 3699
Bso31I GGTCTC 4 cut(s) 946, 1185, 3309, 3334
Bsp119I TTCGAA 2 cut(s) 8, 2705
Bsp120I GGGCCC 1 cut(s) 3553
Bsp1286I GDGCHC 7 cut(s) 1694, 2062, 2194, 2715, 2854, 3557, 4025
Bsp1407I TGTACA 1 cut(s) 3823
Bsp1720I GCTNAGC 1 cut(s) 2028
Bsp19I CCATGG 1 cut(s) 463
BspFNI CGCG 2 cut(s) 104, 317
BspHI TCATGA 2 cut(s) 1111, 4174
BspMAI CTGCAG 3 cut(s) 2023, 2557, 3478
BspMI ACCTGC 4 cut(s) 2189, 2350, 3025, 3457
BspOI GCTAGC 2 cut(s) 909, 2667
BspT104I TTCGAA 2 cut(s) 8, 2705
BspT107I GGYRCC 5 cut(s) 209, 353, 960, 1979, 3924
BspTI CTTAAG 2 cut(s) 1934, 3508
BspTNI GGTCTC 4 cut(s) 946, 1185, 3309, 3334
BsrDI GCAATG 5 cut(s) 346, 791, 2059, 3114, 3452
BsrGI TGTACA 1 cut(s) 3823
BsrI ACTGG 8 cut(s) 517, 919, 2160, 2287, 2505, 2645, 3712, 3779
BssNI GRCGYC 2 cut(s) 150, 1582
BssSI CACGAG 1 cut(s) 3636
BssT1I CCWWGG 5 cut(s) 153, 463, 1159, 1995, 3034
Bst2BI CACGAG 1 cut(s) 3636
Bst6I CTCTTC 3 cut(s) 1666, 2785, 3401
BstACI GRCGYC 2 cut(s) 150, 1582
BstAFI CTTAAG 2 cut(s) 1934, 3508
BstAPI GCANNNNNTGC 1 cut(s) 1049
BstAUI TGTACA 1 cut(s) 3823
BstBAI YACGTR 1 cut(s) 3566
BstBI TTCGAA 2 cut(s) 8, 2705
BstDSI CCRYGG 4 cut(s) 102, 315, 463, 1065
BstEII GGTNACC 1 cut(s) 3791
BstENI CCTNNNNNAGG 1 cut(s) 2112
BstF5I GGATG 8 cut(s) 46, 253, 268, 724, 2103, 3023, 3029, 3113
BstFNI CGCG 2 cut(s) 104, 317
BstH2I RGCGCY 1 cut(s) 2222
BstHHI GCGC 3 cut(s) 589, 2221, 4138
BstMAI GTCTC 5 cut(s) 946, 1185, 2892, 3309, 3334
BstMCI CGRYCG 1 cut(s) 3441
BstNSI RCATGY 5 cut(s) 1595, 2776, 3824, 4090, 4136
BstPI GGTNACC 1 cut(s) 3791
BstSFI CTRYAG 7 cut(s) 192, 1236, 1683, 1894, 2019, 2553, 3474
BstSLI GKGCMC 3 cut(s) 2062, 2194, 3557
BstSNI TACGTA 1 cut(s) 3566
BstUI CGCG 2 cut(s) 104, 317
BstV1I GCAGC 8 cut(s) 802, 871, 877, 1091, 2567, 2887, 3736, 4164
BstV2I GAAGAC 2 cut(s) 84, 3472
BstX2I RGATCY 6 cut(s) 459, 473, 1568, 1678, 3656, 3853
BstXI CCANNNNNNTGG 1 cut(s) 470
BstYI RGATCY 6 cut(s) 459, 473, 1568, 1678, 3656, 3853
BstZI CGGCCG 1 cut(s) 3438
Bsu36I CCTNAGG 2 cut(s) 1230, 3265
BsuI GTATCC 3 cut(s) 28, 762, 2918
BtgI CCRYGG 4 cut(s) 102, 315, 463, 1065
BtsCI GGATG 8 cut(s) 46, 253, 268, 724, 2103, 3023, 3029, 3113
BtsI GCAGTG 1 cut(s) 562
BtsIMutI CAGTG 6 cut(s) 510, 562, 2089, 2386, 2638, 3786
BveI ACCTGC 4 cut(s) 2189, 2350, 3025, 3457
CaiI CAGNNNCTG 3 cut(s) 1700, 2018, 2609
CciI TCATGA 2 cut(s) 1111, 4174
CfoI GCGC 3 cut(s) 589, 2221, 4138
Cfr42I CCGCGG 2 cut(s) 105, 318
CseI GACGC 2 cut(s) 158, 1571
DraI TTTAAA 1 cut(s) 3522
DraIII CACNNNGTG 3 cut(s) 544, 1148, 2095
EaeI YGGCCR 2 cut(s) 1068, 3438
EagI CGGCCG 1 cut(s) 3438
Eam1104I CTCTTC 3 cut(s) 1666, 2785, 3401
EarI CTCTTC 3 cut(s) 1666, 2785, 3401
EciI GGCGGA 2 cut(s) 215, 275
Ecl136II GAGCTC 1 cut(s) 4023
EclXI CGGCCG 1 cut(s) 3438
Eco105I TACGTA 1 cut(s) 3566
Eco130I CCWWGG 5 cut(s) 153, 463, 1159, 1995, 3034
Eco147I AGGCCT 1 cut(s) 4108
Eco24I GRGCYC 3 cut(s) 1694, 3557, 4025
Eco31I GGTCTC 4 cut(s) 946, 1185, 3309, 3334
Eco32I GATATC 1 cut(s) 603
Eco47I GGWCC 6 cut(s) 116, 825, 3074, 3537, 3584, 3977
Eco47III AGCGCT 1 cut(s) 2220
Eco52I CGGCCG 1 cut(s) 3438
Eco53kI GAGCTC 1 cut(s) 4023
Eco57I CTGAAG 7 cut(s) 921, 2094, 2160, 2802, 2877, 3425, 3576
Eco81I CCTNAGG 2 cut(s) 1230, 3265
Eco91I GGTNACC 1 cut(s) 3791
EcoICRI GAGCTC 1 cut(s) 4023
EcoNI CCTNNNNNAGG 1 cut(s) 2112
EcoO109I RGGNCCY 4 cut(s) 116, 3074, 3537, 3553
EcoO65I GGTNACC 1 cut(s) 3791
EcoRV GATATC 1 cut(s) 603
EcoT14I CCWWGG 5 cut(s) 153, 463, 1159, 1995, 3034
EcoT22I ATGCAT 3 cut(s) 3177, 4088, 4134
EcoT38I GRGCYC 3 cut(s) 1694, 3557, 4025
ErhI CCWWGG 5 cut(s) 153, 463, 1159, 1995, 3034
FalI AAGNNNNNCTT 5 cut(s) 1852, 1884, 3502, 3534, 4170
FaqI GGGAC 9 cut(s) 129, 755, 964, 1396, 3286, 3523, 3610, 3963, 4075
FauI CCCGC 5 cut(s) 106, 343, 532, 1681, 3287
FauNDI CATATG 2 cut(s) 972, 1549
FbaI TGATCA 2 cut(s) 303, 988
FokI GGATG 8 cut(s) 53, 260, 275, 731, 2090, 3010, 3016, 3100
FriOI GRGCYC 3 cut(s) 1694, 3557, 4025
FspI TGCGCA 1 cut(s) 588
GlaI GCGC 3 cut(s) 588, 2220, 4137
GsaI CCCAGC 2 cut(s) 934, 3618
GsuI CTGGAG 3 cut(s) 3564, 3708, 3762
HaeII RGCGCY 1 cut(s) 2222
HgaI GACGC 2 cut(s) 158, 1571
HhaI GCGC 3 cut(s) 589, 2221, 4138
Hin1I GRCGYC 2 cut(s) 150, 1582
Hin6I GCGC 3 cut(s) 587, 2219, 4136
HinP1I GCGC 3 cut(s) 587, 2219, 4136
HincII GTYRAC 3 cut(s) 1309, 1949, 3670
HindII GTYRAC 3 cut(s) 1309, 1949, 3670
HindIII AAGCTT 2 cut(s) 678, 2030
HpaI GTTAAC 1 cut(s) 1309
Hpy99I CGWCG 3 cut(s) 91, 149, 152
HpyCH4IV ACGT 3 cut(s) 2657, 2867, 3565
HpySE526I ACGT 3 cut(s) 2657, 2867, 3565
Hsp92I GRCGYC 2 cut(s) 150, 1582
HspAI GCGC 3 cut(s) 587, 2219, 4136
KflI GGGWCCC 2 cut(s) 116, 3537
KpnI GGTACC 3 cut(s) 964, 1983, 3928
Ksp22I TGATCA 2 cut(s) 303, 988
KspAI GTTAAC 1 cut(s) 1309
KspI CCGCGG 2 cut(s) 105, 318
LmnI GCTCC 9 cut(s) 686, 812, 1331, 1558, 2630, 3003, 3895, 4020, 4028
Lsp1109I GCAGC 8 cut(s) 802, 871, 877, 1091, 2567, 2887, 3736, 4164
LweI GCATC 7 cut(s) 238, 253, 1729, 2048, 3162, 3823, 4016
MaeII ACGT 3 cut(s) 2657, 2867, 3565
MaeIII GTNAC 9 cut(s) 832, 895, 1140, 1154, 1600, 1917, 3714, 3791, 4163
MfeI CAATTG 2 cut(s) 1014, 2204
MflI RGATCY 6 cut(s) 459, 473, 1568, 1678, 3656, 3853
MhlI GDGCHC 7 cut(s) 1694, 2062, 2194, 2715, 2854, 3557, 4025
MlyI GAGTC 5 cut(s) 299, 341, 1259, 2603, 3872
MmeI TCCRAC 6 cut(s) 168, 1543, 1580, 1795, 1807, 2767
Mph1103I ATGCAT 3 cut(s) 3177, 4088, 4134
MroXI GAANNNNTTC 4 cut(s) 139, 1570, 2794, 3187
MslI CAYNNNNRTG 3 cut(s) 1116, 1631, 3779
MspA1I CMGCKG 3 cut(s) 104, 317, 3310
MspCI CTTAAG 2 cut(s) 1934, 3508
MunI CAATTG 2 cut(s) 1014, 2204
Mva1269I GAATGC 1 cut(s) 3699
MvnI CGCG 2 cut(s) 104, 317
NciI CCSGG 3 cut(s) 406, 965, 1579
NcoI CCATGG 1 cut(s) 463
NdeI CATATG 2 cut(s) 972, 1549
NheI GCTAGC 2 cut(s) 905, 2663
NmuCI GTSAC 5 cut(s) 895, 1140, 3714, 3791, 4163
NsbI TGCGCA 1 cut(s) 588
NsiI ATGCAT 3 cut(s) 3177, 4088, 4134
NspI RCATGY 5 cut(s) 1595, 2776, 3824, 4090, 4136
NspV TTCGAA 2 cut(s) 8, 2705
OliI CACNNNNGTG 1 cut(s) 3779
PaeI GCATGC 1 cut(s) 4136
PagI TCATGA 2 cut(s) 1111, 4174
PaqCI CACCTGC 1 cut(s) 3025
PceI AGGCCT 1 cut(s) 4108
PciI ACATGT 1 cut(s) 3820
PctI GAATGC 1 cut(s) 3699
PdmI GAANNNNTTC 4 cut(s) 139, 1570, 2794, 3187
PflFI GACNNNGTC 1 cut(s) 2619
PflMI CCANNNNNTGG 6 cut(s) 1265, 1282, 1562, 3802, 3952, 4145
PfoI TCCNGGA 2 cut(s) 2296, 3580
PleI GAGTC 5 cut(s) 298, 340, 1258, 2602, 3872
PpsI GAGTC 5 cut(s) 298, 340, 1258, 2602, 3872
Ppu21I YACGTR 1 cut(s) 3566
PpuMI RGGWCCY 3 cut(s) 116, 3074, 3537
PscI ACATGT 1 cut(s) 3820
PsiI TTATAA 1 cut(s) 1191
Psp124BI GAGCTC 1 cut(s) 4025
Psp5II RGGWCCY 3 cut(s) 116, 3074, 3537
PspEI GGTNACC 1 cut(s) 3791
PspFI CCCAGC 2 cut(s) 930, 3614
PspOMI GGGCCC 1 cut(s) 3553
PspPPI RGGWCCY 3 cut(s) 116, 3074, 3537
PstI CTGCAG 3 cut(s) 2023, 2557, 3478
PstNI CAGNNNCTG 3 cut(s) 1700, 2018, 2609
PsuI RGATCY 6 cut(s) 459, 473, 1568, 1678, 3656, 3853
PsyI GACNNNGTC 1 cut(s) 2619
PvuII CAGCTG 1 cut(s) 3310
RseI CAYNNNNRTG 3 cut(s) 1116, 1631, 3779
SacI GAGCTC 1 cut(s) 4025
SacII CCGCGG 2 cut(s) 105, 318
ScaI AGTACT 2 cut(s) 397, 2813
SchI GAGTC 5 cut(s) 299, 341, 1259, 2603, 3872
SduI GDGCHC 7 cut(s) 1694, 2062, 2194, 2715, 2854, 3557, 4025
SfaNI GCATC 7 cut(s) 238, 253, 1729, 2048, 3162, 3823, 4016
SfcI CTRYAG 7 cut(s) 192, 1236, 1683, 1894, 2019, 2553, 3474
Sfr303I CCGCGG 2 cut(s) 105, 318
SfuI TTCGAA 2 cut(s) 8, 2705
SgrBI CCGCGG 2 cut(s) 105, 318
SinI GGWCC 6 cut(s) 116, 825, 3074, 3537, 3584, 3977
SmiMI CAYNNNNRTG 3 cut(s) 1116, 1631, 3779
SmlI CTYRAG 2 cut(s) 1934, 3508
SmoI CTYRAG 2 cut(s) 1934, 3508
SnaBI TACGTA 1 cut(s) 3566
SphI GCATGC 1 cut(s) 4136
SseBI AGGCCT 1 cut(s) 4108
SspI AATATT 2 cut(s) 2702, 2826
SstI GAGCTC 1 cut(s) 4025
StuI AGGCCT 1 cut(s) 4108
StyI CCWWGG 5 cut(s) 153, 463, 1159, 1995, 3034
TaiI ACGT 3 cut(s) 2660, 2870, 3568
TaqI TCGA 7 cut(s) 8, 66, 78, 293, 807, 2653, 2705
TatI WGTACW 4 cut(s) 395, 2143, 2811, 3823
TauI GCSGC 6 cut(s) 104, 107, 191, 200, 4120, 4152
TscAI CASTG 6 cut(s) 517, 562, 2096, 2386, 2645, 3786
TseFI GTSAC 5 cut(s) 895, 1140, 3714, 3791, 4163
TseI GCWGC 8 cut(s) 815, 865, 884, 1079, 2555, 2875, 3749, 4152
Tsp45I GTSAC 5 cut(s) 895, 1140, 3714, 3791, 4163
TspGWI ACGGA 1 cut(s) 53
TspRI CASTG 6 cut(s) 517, 562, 2096, 2386, 2645, 3786
Tth111I GACNNNGTC 1 cut(s) 2619
Van91I CCANNNNNTGG 6 cut(s) 1265, 1282, 1562, 3802, 3952, 4145
Vha464I CTTAAG 2 cut(s) 1934, 3508
VneI GTGCAC 2 cut(s) 2058, 2190
VpaK11BI GGWCC 6 cut(s) 116, 825, 3074, 3537, 3584, 3977
XagI CCTNNNNNAGG 1 cut(s) 2112
XapI RAATTY 2 cut(s) 2458, 2587
XbaI TCTAGA 1 cut(s) 2890
XceI RCATGY 5 cut(s) 1595, 2776, 3824, 4090, 4136
XcmI CCANNNNNNNNNTGG 1 cut(s) 2996
XmnI GAANNNNTTC 4 cut(s) 139, 1570, 2794, 3187
ZrmI AGTACT 2 cut(s) 397, 2813
Zsp2I ATGCAT 3 cut(s) 3177, 4088, 4134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.