Rh1BG182500

Protein transport protein sec16

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
29201420 .. 29209224
7805 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG182500.1

Sequence Viewer

Length: 5004 bp
ATGGCCAGTTCTGCGTTTGAGTTGGAGGATCAGACGGATGAGGATTTCTTTGACAAATTGATCGATGATGATGACATTGATTTTTCTGGGTATGCAAATAGTTCTGTAGGAAAAGTTGAACTTGATGTGGTTAAAGATGTTTCAAAATTGAGTATTTCGGATGTAGGTGCCGGTGGGAAAACTAGTTCTCAGCTTAATGGTGAGTTGGGTCAGAAAGACGGGGTTGTGTTGGAGCCGTCGGATCTGCAGAAGGAGTCTTTGACTGGTGGAGAGACTGAGTCTAGTGCATTGGTGGCCAAAGGGGAGGAAGGTGTGGTGGATGATACAGTGAGTTCGAGTGTTGTATCAGTTGATGATGAATTGGGTATCGGGGATGGGGTTAATGGTCAATTGGGGCACGGCGATGGGGTTGTGTTAGCTTCGTTGGATCGACACCAGGATCCTATAGTCGGTGAAGCGAGCAAGTCATCAGTACCGGAAAATAGAGATGAGGCAGTGGAGGATAAAGCTAGTAATGAGGGTGGTGAATTGGAGGGTAAAGGGGAGGACAGTTCTGTAGATAATACAGTCATAAAGAGAGTGGTGTCAGAGGGAACAGGTGTTAAAGTAGTTCAATGGAGTTCGTTTAACTCAGATCCTTCTGGTGGTAGTGGATTTGGGTCATACTCAGATTTTTTTACTGAAGTTGGAGATAACTCAGAAGACCCATTTGCAAATTTGGGTAACACAGACCAATCTGGGGTCAAATCTATTGTGTCTAATGGTGTTCTGGAAAGCTCAGTTTCTGCTTTCGGTAATTCTAGCTATGTACAGCATCAAGAAGACCCATTTGCAAATTTGGGTAATACAGTCCAATTTGGGGCCGAATCCGTTGTGACTAATGGTGTTCTGGAAAATGCTGTTTCTGGTTTTGATACTTTTAGCTATGGGCAGCAACAAGAAGACCCATTTGCAGATTTGGGTAATTCAGACCAATTTAGGGCCGAATCTGCTGTGAGTAATGTTGTTCTGGAAAACTCGGGTTCTGGTTTGGGTGCTTCTATCTATGGGAAGCATCAAGAAGATCCATTTGTGAATTTGGGTAATACAGACCAGTCTGGGGCTGAATCTAATGTCAGTAATGGTGTTTTGGAGAACTCAGTTTCTGGTTTGGGTACTTCTAGCTATGGGCAGCATCAAGAAGGTCAGTTCTATGGGGCTCCTGAAAATCAAAACTTAGACGGGCAAGAATTAAATAGTAATCAGAATTGGGAAAATCTTTATCCCGGATGGAGGTACGATCCAAATACTGAGCAGTGGTATCCATTGGAGGGTTATGATGTGAATTCAAACACAAATGCAGAGGTGAACAATAATGCAAATGCTCAGGAGAGTTTTAATGTAAATTCTCAGTCTGCAGATACTGAAGTTTTTTCAGCCCAGAAAGCAGATGCTCCTTATCTGCAGCAAGCAGTGCAGGCTGTTTCTCAAAGCGTGGTTGAGGCATCTGAAACTAGCACAGTTTCTAACTGGAACCAGCATTCTTATGGGAACACAGAATACCCTGCACATATGGTTTTTGATCCCCAGTACCCCGGTTGGTACTATGACACAAATATCCAAGAATGGAGGCAGTTGGAACCTTCTGTAGCTACAATCTACTATGATCAGCAAAATACGAGTACGTGGCATGCTGAAAATGTTGCCAAGAGTGAAACTGTTGGTTTTACTGAGAAACAGGAACGGAGACAGTTGCAGCCTTTCACTCCATCTTTTGATCAGTCAACAGCAAGTATGGTTCATAGTCAGCAATATAACAATACAAATGTTGACAACCATGGATCACAGAGTCCAATCATTCAACAAAGTGTTTTAAACTGGGATGGATCTATGACCGCCTATGATCAGCAAAATACAAGTTTGTGGCATGCTCAGAAAGTTGCCAAGAGTGATACTGTTGGTTTTACTGAGAAACAGCCATACATGGACCGGCAATTTTCAACTGAGCATTCATTTAATTCTGTGAATCAACAAACAGGGTTCAATCCTTCAGGATCAATTGCTCTTCATCAAGACCCAAGTCAGGGCAATGATATTAGTAGTGCGATTGGTGGCTTTGAAAGGTTTAATTATGCTAACTTTTCTCAGCCTCAGGATCAAGCCAAGGAGCCAAACCAAGTGATGCATTTCTCACCTGCTAACTTTGGTAGTCAGAAGCAAGTACAATTTTTCCAGCAGCCACTCCAGACTGGAACTCAGTTTTCACACGAGGCCAGAGAGGGGAGGTCATCTGCTGGACGACCTGCACATGCTCTGGTTACTTTTGGATTTGGTGGGAAATTTATAGTAATGAAAAATAATAGTTCTTTTCATGCAAACCAGACATATGGAAGCCAGGGCTCTGTAGAAGGTGTCATTAATGTTCTCAATCTGATGGATGTTGTCACGGAGAAAAGTGACGCTGCAAACTTTGGAACTGATGGTTGTGATTATTTCAGCGCCTTGTGCCAGCAATCTTTTCCTGGACCTTTAGTTGGTGGGAATGTCGGAAATAAGGAATTAAACAAATGGATTGATGACAAAATTACAAATTGTGAAACTTCTCACTTGGATTTCAAGAAAGGGGACCATTTGAGATTGCTTTTCTCTTTACTAAAAATATCTTGGCAATTTTATGGAAAACTTCGATCTCCCTTCGGTACTGATCAAAGATTGAAGGACATTGATAATCCAGAATCAGCTCTTGCTAAACTTTTTGCATCTGCTAAAAGAAGTAACGAGTATGGTACTCTTACGCGGTGCATGCATAACTTGCCTTCTGAAGCACAAATTCAGGCTACTGCTCTTGAGGTACAAAAGCTTCTTGTCTCTGGTAGGAAGGATGAGGCTTTACAATGCGCACAAGAAGGTCAATTGTGGGGACCAGCACTTGTTATTGCATCACAACTTGGTGATCAGTTTTATTGTGATACTGTGAAGCATATGGCTGTAAACCAGTTAATAGCAGGATCACCATTGCGGACGTTGTGCTTGTTAATCGCCAGGCAGCCAGCAGATGTGTTTTCTGATGCTACTACAAATAGCAGTTTTCCTAGTGTCACAAATTTATCACAACAGCACGAACAGGTTGGAGCTAATTACATGTTAGATGACTGGGAAGAGAATCTAGCCATCTTAACTGCAAATAGAACAAAAGATGATGAGCTTGTTATCATCCATCTTGGAGATTCCTTATGGAAGGATAGGGGACAGATAACTGCTGCACACATATGTTATTTAGTTGCAGAAGCCAACCTTGAGCAATATTCGAACAGTTCAAGACTGTGTCTTATCGGTGCTGATCATTGGAAGTTTCCACGAACATACGCCAGTCCAGAGGCTATTCAGAGGACAGAGCTGTATGAATACTCAAAGGTTGTTGGAAATCCTCAGTTTCTTCTACTACCTTTTCAGCCATATAAGCTTATTTATGCCCACATGCTGGCTGAAGTAGGAAAACTTGCTGATGCTTTGAAATATTGTCAAGCAATTTTGAAGTCTTTGAAAACTGCTCGAGCATCTGAGGTGGACACATGGAGAGAGTTGGTGTCATCTCTGGAGGAGCGGATAAGAGCCCACCAGCAGGGTGGTTATAGCATAAATTTGGCTCCAACCAAGTTGATGGGTAAATTGCGTACATTCATTGATAGTACTGCTCATCGTGTTGTTGGGGGGCTACCTCCACCTATACCATCAACAGCACCAGGCTTTCCTCAGCTTAATGAACATGCTCATCAACTACCTCCACCTATACCATCAACAGCACCAGGCTTCCCTCTGCTTAATGAACATGCTCATCAACTACCTCCACCTATACCATCAACAGCACCAGGCTTTGCTCAGCTTAATGAACATGCTCATCAACCAGGAAATCCAAATGTACCCAACAGTCAATCGACAATGGTTATGTCTTCATTAATGCCTTCAGCATCAATGGAGCCAATAAGTGAAAGGACTTCTGAGAGCAACCAACTGAATATGCCTAACAGAAGCATTTCAGAGCCAGACTTTGGGAAAAGCCCGAGTAAGGTCGATTCATCCAAGAAAGTGAACTCCTCTAAAACGCAACAAAAGCCATCAGCATCTAGTGGGTCACGTTTCAGTTTTGGGTCACAGATATTTCAGAAGACTCTAGGATTGGTCATAAAATCCCGGCCAGATAAGCAGGCTAAATTGGGTGAAGCAAATAAATTCTACTATGATGAGAAACTCAAGCGATGGGTCGAAGAAGGTGCTGAACCTCCAGCCGAGGAAGCAGCCTTACCACCACTTCCGCCAACAACTGCAGCTATCCAGAATAGAATGCAAGATTACAACATGAATGATGCACTGAAAACTACTAGTTTTCATGCAGTTGGTGGGCCAGAAATCAAAAGCCCAGCATCTTCCGAGAATTCAGGGGCACCACCCGTTCCACCCAGTTCAAACCAGTTCTCTGCACGTGGGCATATGGGTGTTCGCTCAAGGTATGTTGATACATTCAACAAAGGCGGTGCGACCCCAGGAAACTTATTTCAGCCACCATCTCTTCCAGCTGCTAAACTAGGGGGTGGTTCCAATCCCAAGTTTTTCATCCCCTCTCCAGTAACTTCCTATCAGGAAACAGTTCAAACAACTGAAGGAAGCACACAAGAATCTTTTGTGACCAGTAACAATCCTCCAAAATCAGTAGACACATTCTCTACTCCGCCAACCTCAACACCATCGTCAATGACCATGCAACGGTTTCCTAGCATGGATAACATTGTACAAAAGAGAGCAGGAGAATTGGCAAATGGCAGTAGCTTTGTTCCACCTGAATCTCGTCGTGTGGCATCATGGAGTGGAAGCCTTAGTGAAGCAAGCAATCCTTCGGTAAGGAGTGAAATAAAACCAACAGCACTTGGTATGTCCCCATTGTCATATATGCCCAGTTTTTCTCCATCAATGCAGTCTGAAAGAAGCAGTGGTAGTTTGGGGGATGACCTTCATGAAGTTGAACTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1667

Amino Acids

181.04

Weight (kDa)

4.81

Isoelectric Point (pI)

45.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec16 PF12932 763 - 886 6.1e-20 Vesicle coat trafficking protein Sec16 mid-region
TPR_Sec16 PF12931 944 - 1231 5.3e-55 Sec16 Sec23-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2182
Acc16I TGCGCA 1 cut(s) 2878
Acc36I ACCTGC 2 cut(s) 2182, 2290
AccB1I GGYRCC 2 cut(s) 167, 4420
AccB7I CCANNNNNTGG 2 cut(s) 3460, 4028
AccBSI CCGCTC 1 cut(s) 3583
AccI GTMKAC 1 cut(s) 4689
AccII CGCG 1 cut(s) 2776
AciI CCGC 7 cut(s) 1875, 2776, 2998, 3583, 4292, 4509, 4706
AcoI YGGCCR 3 cut(s) 3, 294, 4172
AcuI CTGAAG 7 cut(s) 702, 1425, 2013, 2820, 3486, 3927, 4656
AcvI CACGTG 1 cut(s) 4460
AflIII ACRYGT 1 cut(s) 3120
AhlI ACTAGT 2 cut(s) 182, 4358
AjnI CCWGG 9 cut(s) 435, 2373, 2500, 3020, 3721, 3784, 3847, 3883, 4519
AloI GAACNNNNNNTCC 2 cut(s) 169, 201
Alw26I GTCTC 3 cut(s) 266, 1720, 2851
AlwNI CAGNNNCTG 3 cut(s) 785, 1145, 1403
Ama87I CYCGRG 3 cut(s) 1018, 3531, 4039
AoxI GGCC 7 cut(s) 3, 294, 861, 981, 2250, 4172, 4379
AseI ATTAAT 2 cut(s) 2397, 3935
Asp700I GAANNNNTTC 2 cut(s) 4012, 4623
AspLEI GCGC 2 cut(s) 2480, 2879
AspS9I GGNCC 7 cut(s) 861, 981, 1966, 2504, 2605, 2900, 4379
AsuC2I CCSGG 3 cut(s) 1266, 1575, 4171
AsuHPI GGTGA 8 cut(s) 212, 464, 536, 1357, 2163, 2942, 2982, 4208
AsuII TTCGAA 1 cut(s) 3287
AvaI CYCGRG 3 cut(s) 1018, 3531, 4039
AvaII GGWCC 4 cut(s) 1966, 2504, 2605, 2900
AxyI CCTNAGG 1 cut(s) 2130
BaeGI GKGCMC 2 cut(s) 399, 4423
BaeI ACNNNNGTAYC 2 cut(s) 1392, 1425
BalI TGGCCA 2 cut(s) 5, 296
BamHI GGATCC 1 cut(s) 439
BanI GGYRCC 2 cut(s) 167, 4420
BanII GRGCYC 3 cut(s) 1201, 2381, 3595
BarI GAAGNNNNNNTAC 4 cut(s) 2823, 2855, 4263, 4295
BauI CACGAG 1 cut(s) 2246
BbrPI CACGTG 1 cut(s) 4460
BbsI GAAGAC 5 cut(s) 708, 828, 948, 3921, 4151
BbvCI CCTCAGC 1 cut(s) 3732
BceAI ACGGC 2 cut(s) 220, 415
BcgI CGANNNNNNTGC 2 cut(s) 4232, 4266
BciT130I CCWGG 9 cut(s) 437, 2375, 2502, 3022, 3723, 3786, 3849, 3885, 4521
BciVI GTATCC 1 cut(s) 1311
BclI TGATCA 6 cut(s) 1645, 1756, 1882, 2683, 2932, 3319
BcnI CCSGG 3 cut(s) 1266, 1575, 4171
BcoDI GTCTC 3 cut(s) 266, 1720, 2851
BcuI ACTAGT 2 cut(s) 182, 4358
BfmI CTRYAG 9 cut(s) 105, 245, 444, 555, 1395, 1442, 1626, 2382, 4302
BfoI RGCGCY 1 cut(s) 2481
BfuAI ACCTGC 2 cut(s) 2182, 2290
BfuI GTATCC 1 cut(s) 1311
BlpI GCTNAGC 1 cut(s) 3858
BmcAI AGTACT 1 cut(s) 3670
Bme18I GGWCC 4 cut(s) 1966, 2504, 2605, 2900
BmeT110I CYCGRG 3 cut(s) 1018, 3531, 4039
BmgT120I GGNCC 7 cut(s) 861, 981, 1966, 2504, 2605, 2900, 4379
BmrI ACTGGG 5 cut(s) 1561, 1867, 3142, 4431, 4923
BmuI ACTGGG 5 cut(s) 1561, 1867, 3142, 4431, 4923
BoxI GACNNNNGTC 1 cut(s) 2058
BpiI GAAGAC 5 cut(s) 708, 828, 948, 3921, 4151
BpmI CTGGAG 4 cut(s) 2207, 3596, 4245, 4584
Bpu10I CCTNAGC 2 cut(s) 1365, 3732
Bpu1102I GCTNAGC 1 cut(s) 3858
Bpu14I TTCGAA 1 cut(s) 3287
BpuEI CTTGAG 4 cut(s) 2846, 3296, 4214, 4465
BpuMI CCSGG 3 cut(s) 1266, 1575, 4171
Bsa29I ATCGAT 1 cut(s) 63
BsaAI YACGTR 2 cut(s) 1665, 4460
BsaJI CCNNGG 6 cut(s) 1573, 1816, 2142, 2374, 4266, 4519
BsaWI WCCGGW 1 cut(s) 475
Bse118I RCCGGY 2 cut(s) 170, 1968
Bse21I CCTNAGG 1 cut(s) 2130
Bse3DI GCAATG 2 cut(s) 2074, 2993
BseBI CCWGG 9 cut(s) 437, 2375, 2502, 3022, 3723, 3786, 3849, 3885, 4521
BseCI ATCGAT 1 cut(s) 63
BseDI CCNNGG 6 cut(s) 1573, 1816, 2142, 2374, 4266, 4519
BseMI GCAATG 2 cut(s) 2074, 2993
BseRI GAGGAG 2 cut(s) 3593, 4063
BseSI GKGCMC 2 cut(s) 399, 4423
BseYI CCCAGC 1 cut(s) 4396
BsgI GTGCAG 5 cut(s) 1475, 1530, 2268, 3225, 4440
Bsh1236I CGCG 1 cut(s) 2776
BshFI GGCC 7 cut(s) 5, 296, 863, 983, 2252, 4174, 4381
BshNI GGYRCC 2 cut(s) 167, 4420
BshVI ATCGAT 1 cut(s) 63
BsiHKCI CYCGRG 3 cut(s) 1018, 3531, 4039
BsiSI CCGG 6 cut(s) 171, 476, 1266, 1575, 1969, 4171
BslFI GGGAC 4 cut(s) 2618, 2913, 3240, 4894
BsmAI GTCTC 3 cut(s) 266, 1720, 2851
BsmFI GGGAC 4 cut(s) 2618, 2913, 3240, 4894
BsmI GAATGC 3 cut(s) 1519, 1987, 4326
BsnI GGCC 7 cut(s) 5, 296, 863, 983, 2252, 4174, 4381
BsoBI CYCGRG 3 cut(s) 1018, 3531, 4039
Bsp119I TTCGAA 1 cut(s) 3287
Bsp1286I GDGCHC 5 cut(s) 399, 1201, 2381, 3595, 4423
Bsp1407I TGTACA 2 cut(s) 808, 4765
Bsp1720I GCTNAGC 1 cut(s) 3858
Bsp19I CCATGG 1 cut(s) 1816
BspACI CCGC 7 cut(s) 1875, 2776, 2998, 3583, 4292, 4509, 4706
BspANI GGCC 7 cut(s) 5, 296, 863, 983, 2252, 4174, 4381
BspDI ATCGAT 1 cut(s) 63
BspFNI CGCG 1 cut(s) 2776
BspHI TCATGA 1 cut(s) 4987
BspMAI CTGCAG 4 cut(s) 249, 1399, 1446, 4306
BspMI ACCTGC 2 cut(s) 2182, 2290
BspQI GCTCTTC 1 cut(s) 2049
BspT104I TTCGAA 1 cut(s) 3287
BspT107I GGYRCC 2 cut(s) 167, 4420
BsrBI CCGCTC 1 cut(s) 3583
BsrDI GCAATG 2 cut(s) 2074, 2993
BsrFI RCCGGY 2 cut(s) 170, 1968
BsrGI TGTACA 2 cut(s) 808, 4765
BssAI RCCGGY 2 cut(s) 170, 1968
BssECI CCNNGG 6 cut(s) 1573, 1816, 2142, 2374, 4266, 4519
BssSI CACGAG 1 cut(s) 2246
BssT1I CCWWGG 2 cut(s) 1816, 2142
Bst2BI CACGAG 1 cut(s) 2246
Bst2UI CCWGG 9 cut(s) 437, 2375, 2502, 3022, 3723, 3786, 3849, 3885, 4521
Bst6I CTCTTC 3 cut(s) 2049, 3132, 4551
BstAPI GCANNNNNTGC 2 cut(s) 1453, 2791
BstAUI TGTACA 2 cut(s) 808, 4765
BstBAI YACGTR 2 cut(s) 1665, 4460
BstBI TTCGAA 1 cut(s) 3287
BstDSI CCRYGG 1 cut(s) 1816
BstFNI CGCG 1 cut(s) 2776
BstH2I RGCGCY 1 cut(s) 2481
BstHHI GCGC 2 cut(s) 2480, 2879
BstMAI GTCTC 3 cut(s) 266, 1720, 2851
BstNI CCWGG 9 cut(s) 437, 2375, 2502, 3022, 3723, 3786, 3849, 3885, 4521
BstNSI RCATGY 9 cut(s) 1673, 1910, 2291, 2785, 3124, 3460, 3749, 3812, 3875
BstPAI GACNNNNGTC 1 cut(s) 2058
BstSFI CTRYAG 9 cut(s) 105, 245, 444, 555, 1395, 1442, 1626, 2382, 4302
BstSLI GKGCMC 2 cut(s) 399, 4423
BstUI CGCG 1 cut(s) 2776
BstV2I GAAGAC 5 cut(s) 708, 828, 948, 3921, 4151
BstX2I RGATCY 5 cut(s) 241, 439, 634, 1063, 1865
BstXI CCANNNNNNTGG 3 cut(s) 2366, 3605, 3640
BstYI RGATCY 5 cut(s) 241, 439, 634, 1063, 1865
Bsu15I ATCGAT 1 cut(s) 63
Bsu36I CCTNAGG 1 cut(s) 2130
BsuI GTATCC 1 cut(s) 1311
BsuRI GGCC 7 cut(s) 5, 296, 863, 983, 2252, 4174, 4381
BsuTUI ATCGAT 1 cut(s) 63
BtgI CCRYGG 1 cut(s) 1816
BtgZI GCGATG 2 cut(s) 417, 4249
BtsI GCAGTG 4 cut(s) 501, 1301, 1458, 4969
BtsIMutI CAGTG 6 cut(s) 333, 501, 1301, 1458, 4346, 4969
BveI ACCTGC 2 cut(s) 2182, 2290
CaiI CAGNNNCTG 3 cut(s) 785, 1145, 1403
CciI TCATGA 1 cut(s) 4987
CfoI GCGC 2 cut(s) 2480, 2879
Cfr10I RCCGGY 2 cut(s) 170, 1968
Cfr13I GGNCC 7 cut(s) 861, 981, 1966, 2504, 2605, 2900, 4379
ClaI ATCGAT 1 cut(s) 63
CseI GACGC 1 cut(s) 2447
DraI TTTAAA 1 cut(s) 1854
EaeI YGGCCR 3 cut(s) 3, 294, 4172
Eam1104I CTCTTC 3 cut(s) 2049, 3132, 4551
EarI CTCTTC 3 cut(s) 2049, 3132, 4551
EciI GGCGGA 2 cut(s) 4281, 4695
Eco130I CCWWGG 2 cut(s) 1816, 2142
Eco24I GRGCYC 3 cut(s) 1201, 2381, 3595
Eco47I GGWCC 4 cut(s) 1966, 2504, 2605, 2900
Eco57I CTGAAG 7 cut(s) 702, 1425, 2013, 2820, 3486, 3927, 4656
Eco72I CACGTG 1 cut(s) 4460
Eco81I CCTNAGG 1 cut(s) 2130
Eco88I CYCGRG 3 cut(s) 1018, 3531, 4039
EcoRI GAATTC 2 cut(s) 1324, 4411
EcoRII CCWGG 9 cut(s) 435, 2373, 2500, 3020, 3721, 3784, 3847, 3883, 4519
EcoT14I CCWWGG 2 cut(s) 1816, 2142
EcoT22I ATGCAT 2 cut(s) 2166, 2787
EcoT38I GRGCYC 3 cut(s) 1201, 2381, 3595
ErhI CCWWGG 2 cut(s) 1816, 2142
FalI AAGNNNNNCTT 6 cut(s) 105, 137, 3258, 3290, 4852, 4884
FaqI GGGAC 4 cut(s) 2618, 2913, 3240, 4894
FauNDI CATATG 5 cut(s) 1551, 2365, 2961, 3248, 4467
FbaI TGATCA 6 cut(s) 1645, 1756, 1882, 2683, 2932, 3319
FblI GTMKAC 1 cut(s) 4689
FriOI GRGCYC 3 cut(s) 1201, 2381, 3595
FspAI RTGCGCAY 1 cut(s) 2878
FspI TGCGCA 1 cut(s) 2878
GlaI GCGC 2 cut(s) 2479, 2878
GsaI CCCAGC 1 cut(s) 4400
GsuI CTGGAG 4 cut(s) 2207, 3596, 4245, 4584
HaeII RGCGCY 1 cut(s) 2481
HaeIII GGCC 7 cut(s) 5, 296, 863, 983, 2252, 4174, 4381
HapII CCGG 6 cut(s) 171, 476, 1266, 1575, 1969, 4171
HgaI GACGC 1 cut(s) 2447
HhaI GCGC 2 cut(s) 2480, 2879
Hin6I GCGC 2 cut(s) 2478, 2877
HinP1I GCGC 2 cut(s) 2478, 2877
HincII GTYRAC 2 cut(s) 1764, 1810
HindII GTYRAC 2 cut(s) 1764, 1810
HindIII AAGCTT 2 cut(s) 2837, 3440
HpaII CCGG 6 cut(s) 171, 476, 1266, 1575, 1969, 4171
HphI GGTGA 8 cut(s) 212, 464, 536, 1357, 2163, 2942, 2982, 4208
Hpy166II GTNNAC 7 cut(s) 1348, 1764, 1810, 2971, 3547, 4069, 4690
Hpy8I GTNNAC 7 cut(s) 1348, 1764, 1810, 2971, 3547, 4069, 4690
Hpy99I CGWCG 2 cut(s) 241, 4827
HpyCH4IV ACGT 4 cut(s) 1664, 3002, 4114, 4459
HpySE526I ACGT 4 cut(s) 1664, 3002, 4114, 4459
HspAI GCGC 2 cut(s) 2478, 2877
Ksp22I TGATCA 6 cut(s) 1645, 1756, 1882, 2683, 2932, 3319
LguI GCTCTTC 1 cut(s) 2049
LmnI GCTCC 8 cut(s) 232, 1204, 1438, 2146, 3110, 3580, 3631, 3955
MaeII ACGT 4 cut(s) 1664, 3002, 4114, 4459
MbiI CCGCTC 1 cut(s) 3583
MfeI CAATTG 3 cut(s) 389, 2037, 2891
MflI RGATCY 5 cut(s) 241, 439, 634, 1063, 1865
MhlI GDGCHC 5 cut(s) 399, 1201, 2381, 3595, 4423
MlsI TGGCCA 2 cut(s) 5, 296
MluNI TGGCCA 2 cut(s) 5, 296
MlyI GAGTC 4 cut(s) 263, 287, 1837, 4141
MmeI TCCRAC 9 cut(s) 210, 219, 405, 667, 1596, 2506, 3088, 3379, 3653
Mox20I TGGCCA 2 cut(s) 5, 296
Mph1103I ATGCAT 2 cut(s) 2166, 2787
MroXI GAANNNNTTC 2 cut(s) 4012, 4623
MscI TGGCCA 2 cut(s) 5, 296
MslI CAYNNNNRTG 4 cut(s) 402, 1524, 3247, 4470
Msp20I TGGCCA 2 cut(s) 5, 296
MspA1I CMGCKG 1 cut(s) 4553
MspI CCGG 6 cut(s) 171, 476, 1266, 1575, 1969, 4171
MunI CAATTG 3 cut(s) 389, 2037, 2891
Mva1269I GAATGC 3 cut(s) 1519, 1987, 4326
MvaI CCWGG 9 cut(s) 437, 2375, 2502, 3022, 3723, 3786, 3849, 3885, 4521
MvnI CGCG 1 cut(s) 2776
NciI CCSGG 3 cut(s) 1266, 1575, 4171
NcoI CCATGG 1 cut(s) 1816
NdeI CATATG 5 cut(s) 1551, 2365, 2961, 3248, 4467
NmeAIII GCCGAG 1 cut(s) 4291
NmuCI GTSAC 7 cut(s) 874, 2422, 2435, 3076, 4110, 4128, 4660
NsbI TGCGCA 1 cut(s) 2878
NsiI ATGCAT 2 cut(s) 2166, 2787
NspI RCATGY 9 cut(s) 1673, 1910, 2291, 2785, 3124, 3460, 3749, 3812, 3875
NspV TTCGAA 1 cut(s) 3287
PaeI GCATGC 3 cut(s) 1673, 1910, 2785
PaeR7I CTCGAG 1 cut(s) 3531
PagI TCATGA 1 cut(s) 4987
PaqCI CACCTGC 1 cut(s) 2182
PciI ACATGT 1 cut(s) 3120
PciSI GCTCTTC 1 cut(s) 2049
PctI GAATGC 3 cut(s) 1519, 1987, 4326
PdmI GAANNNNTTC 2 cut(s) 4012, 4623
PflFI GACNNNGTC 2 cut(s) 277, 3303
PflMI CCANNNNNTGG 2 cut(s) 3460, 4028
PfoI TCCNGGA 2 cut(s) 1264, 2500
PleI GAGTC 4 cut(s) 262, 286, 1836, 4141
PmaCI CACGTG 1 cut(s) 4460
PmlI CACGTG 1 cut(s) 4460
PpsI GAGTC 4 cut(s) 262, 286, 1836, 4141
Ppu21I YACGTR 2 cut(s) 1665, 4460
PscI ACATGT 1 cut(s) 3120
PshAI GACNNNNGTC 1 cut(s) 2058
PshBI ATTAAT 2 cut(s) 2397, 3935
Psp6I CCWGG 9 cut(s) 435, 2373, 2500, 3020, 3721, 3784, 3847, 3883, 4519
PspCI CACGTG 1 cut(s) 4460
PspFI CCCAGC 1 cut(s) 4396
PspGI CCWGG 9 cut(s) 435, 2373, 2500, 3020, 3721, 3784, 3847, 3883, 4519
PspPI GGNCC 7 cut(s) 861, 981, 1966, 2504, 2605, 2900, 4379
PspXI VCTCGAGB 1 cut(s) 3531
PsrI GAACNNNNNNTAC 2 cut(s) 1523, 1555
PstI CTGCAG 4 cut(s) 249, 1399, 1446, 4306
PstNI CAGNNNCTG 3 cut(s) 785, 1145, 1403
PsuI RGATCY 5 cut(s) 241, 439, 634, 1063, 1865
PsyI GACNNNGTC 2 cut(s) 277, 3303
PvuII CAGCTG 1 cut(s) 4553
RseI CAYNNNNRTG 4 cut(s) 402, 1524, 3247, 4470
SapI GCTCTTC 1 cut(s) 2049
Sau96I GGNCC 7 cut(s) 861, 981, 1966, 2504, 2605, 2900, 4379
ScaI AGTACT 1 cut(s) 3670
SchI GAGTC 4 cut(s) 263, 287, 1837, 4141
SduI GDGCHC 5 cut(s) 399, 1201, 2381, 3595, 4423
SfcI CTRYAG 9 cut(s) 105, 245, 444, 555, 1395, 1442, 1626, 2382, 4302
Sfr274I CTCGAG 1 cut(s) 3531
SfuI TTCGAA 1 cut(s) 3287
SinI GGWCC 4 cut(s) 1966, 2504, 2605, 2900
SlaI CTCGAG 1 cut(s) 3531
SmiMI CAYNNNNRTG 4 cut(s) 402, 1524, 3247, 4470
SmlI CTYRAG 5 cut(s) 2825, 3275, 3531, 4229, 4480
SmoI CTYRAG 5 cut(s) 2825, 3275, 3531, 4229, 4480
SpeI ACTAGT 2 cut(s) 182, 4358
SphI GCATGC 3 cut(s) 1673, 1910, 2785
SsiI CCGC 7 cut(s) 1875, 2776, 2998, 3583, 4292, 4509, 4706
SspI AATATT 2 cut(s) 3284, 3497
StyI CCWWGG 2 cut(s) 1816, 2142
TaiI ACGT 4 cut(s) 1667, 3005, 4117, 4462
TaqI TCGA 9 cut(s) 63, 335, 430, 2665, 3287, 3532, 3914, 4050, 4242
TatI WGTACW 4 cut(s) 808, 2200, 3668, 4765
TscAI CASTG 6 cut(s) 333, 501, 1301, 1458, 4353, 4969
TseFI GTSAC 7 cut(s) 874, 2422, 2435, 3076, 4110, 4128, 4660
Tsp45I GTSAC 7 cut(s) 874, 2422, 2435, 3076, 4110, 4128, 4660
TspGWI ACGGA 4 cut(s) 50, 859, 1738, 2441
TspRI CASTG 6 cut(s) 333, 501, 1301, 1458, 4353, 4969
Tth111I GACNNNGTC 2 cut(s) 277, 3303
Van91I CCANNNNNTGG 2 cut(s) 3460, 4028
VpaK11BI GGWCC 4 cut(s) 1966, 2504, 2605, 2900
VspI ATTAAT 2 cut(s) 2397, 3935
XceI RCATGY 9 cut(s) 1673, 1910, 2291, 2785, 3124, 3460, 3749, 3812, 3875
XcmI CCANNNNNNNNNTGG 2 cut(s) 1523, 3602
XhoI CTCGAG 1 cut(s) 3531
XmiI GTMKAC 1 cut(s) 4689
XmnI GAANNNNTTC 2 cut(s) 4012, 4623
ZrmI AGTACT 1 cut(s) 3670
Zsp2I ATGCAT 2 cut(s) 2166, 2787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.