MD00G1178600.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
42024776 .. 42025919
1144 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1178600.v1.1.491

Sequence Viewer

Length: 213 bp
ATGAAAATCTCGTCGCATCTCCTTTCAGCCCTTCAAGGAAAACCCACTTCTTGGGCCGTCTTCAACCACTTTTGGATTGAAGTTTGTGTTTTGGGATTTGTTGGGTGCTCGCATATGGAAATTTGGAAATTTTTAGTTGTGGATTGTGGGGAATTGACGCAGTGGCGGTCCTATTTCATGTTAGAAAAGATGGGTGCTCTAGACGCGCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

71

Amino Acids

8.05

Weight (kDa)

6.23

Isoelectric Point (pI)

22.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 51
AccII CGCG 1 cut(s) 206
AciI CCGC 1 cut(s) 166
AcsI RAATTY 2 cut(s) 120, 128
AfiI CCNNNNNNNGG 1 cut(s) 51
AgsI TTSAA 3 cut(s) 35, 64, 80
Alw21I GWGCWC 2 cut(s) 110, 199
AoxI GGCC 1 cut(s) 54
ApoI RAATTY 2 cut(s) 120, 128
AspLEI GCGC 1 cut(s) 208
AspS9I GGNCC 2 cut(s) 54, 168
AvaII GGWCC 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 52
Bbv12I GWGCWC 2 cut(s) 110, 199
BccI CCATC 1 cut(s) 184
BceAI ACGGC 1 cut(s) 41
BfaI CTAG 1 cut(s) 200
Bme18I GGWCC 1 cut(s) 168
BmgT120I GGNCC 2 cut(s) 54, 168
BmsI GCATC 1 cut(s) 25
BpiI GAAGAC 1 cut(s) 52
Bsc4I CCNNNNNNNGG 1 cut(s) 51
BseLI CCNNNNNNNGG 1 cut(s) 51
Bsh1236I CGCG 1 cut(s) 206
BshFI GGCC 1 cut(s) 56
BsiHKAI GWGCWC 2 cut(s) 110, 199
BslI CCNNNNNNNGG 1 cut(s) 51
BsnI GGCC 1 cut(s) 56
Bsp1286I GDGCHC 2 cut(s) 110, 199
BspACI CCGC 1 cut(s) 166
BspANI GGCC 1 cut(s) 56
BspFNI CGCG 1 cut(s) 206
BstC8I GCNNGC 1 cut(s) 110
BstFNI CGCG 1 cut(s) 206
BstHHI GCGC 1 cut(s) 208
BstMWI GCNNNNNNNGC 1 cut(s) 203
BstUI CGCG 1 cut(s) 206
BstV2I GAAGAC 1 cut(s) 52
BsuRI GGCC 1 cut(s) 56
BtsI GCAGTG 1 cut(s) 167
BtsIMutI CAGTG 1 cut(s) 167
Cac8I GCNNGC 1 cut(s) 110
CfoI GCGC 1 cut(s) 208
Cfr13I GGNCC 2 cut(s) 54, 168
CseI GACGC 1 cut(s) 166
CviAII CATG 1 cut(s) 178
CviJI RGCY 2 cut(s) 29, 56
CviKI_1 RGCY 2 cut(s) 29, 56
Eco47I GGWCC 1 cut(s) 168
FaeI CATG 1 cut(s) 181
FaiI YATR 3 cut(s) 114, 116, 179
FatI CATG 1 cut(s) 177
FauNDI CATATG 1 cut(s) 114
FspBI CTAG 1 cut(s) 200
GlaI GCGC 1 cut(s) 207
HaeIII GGCC 1 cut(s) 56
HgaI GACGC 1 cut(s) 166
HhaI GCGC 1 cut(s) 208
Hin1II CATG 1 cut(s) 181
Hin6I GCGC 1 cut(s) 206
HinP1I GCGC 1 cut(s) 206
Hpy188III TCNNGA 1 cut(s) 200
Hpy99I CGWCG 1 cut(s) 16
HpyAV CCTTC 1 cut(s) 41
HpyF10VI GCNNNNNNNGC 1 cut(s) 203
Hsp92II CATG 1 cut(s) 181
HspAI GCGC 1 cut(s) 206
LweI GCATC 1 cut(s) 25
MaeI CTAG 1 cut(s) 200
MboII GAAGA 1 cut(s) 52
MhlI GDGCHC 2 cut(s) 110, 199
MluCI AATT 3 cut(s) 120, 128, 152
MvnI CGCG 1 cut(s) 206
MwoI GCNNNNNNNGC 1 cut(s) 203
NdeI CATATG 1 cut(s) 114
NlaIII CATG 1 cut(s) 181
PflMI CCANNNNNTGG 1 cut(s) 51
PspPI GGNCC 2 cut(s) 54, 168
Sau96I GGNCC 2 cut(s) 54, 168
SduI GDGCHC 2 cut(s) 110, 199
SfaNI GCATC 1 cut(s) 25
SgeI CNNG 5 cut(s) 22, 47, 63, 121, 190
SinI GGWCC 1 cut(s) 168
Sse9I AATT 3 cut(s) 120, 128, 152
SsiI CCGC 1 cut(s) 166
SspMI CTAG 1 cut(s) 200
TasI AATT 3 cut(s) 120, 128, 152
TscAI CASTG 1 cut(s) 167
TspDTI ATGAA 2 cut(s) 17, 166
TspRI CASTG 1 cut(s) 167
Van91I CCANNNNNTGG 1 cut(s) 51
VpaK11BI GGWCC 1 cut(s) 168
XapI RAATTY 2 cut(s) 120, 128
XbaI TCTAGA 1 cut(s) 199
XspI CTAG 1 cut(s) 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.