Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002566

Physical Location & Seq

Genomic Coordinates Forward (+)

8357768 .. 8361461

Gene Structure 3694 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1100200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGGAGAGAGGCCAATTTGCTGCGCCGAGCAGCTTAGAGATAAAGGTGGTGAGTCCACGGCGGAGCGACAACGTTGTGCACCCTGGGGGACAACCTCCGGAGACGACGACGCCTCGGCGGTCGTTCAGCGACTACAGCCCGTTGAAGAGGTGGGTGTCATGGCTGGTGCCGTCGATTGTGGTGGCCAACATTGTGGTTTTTGTGGTGACGATGTTTGTGAACGATTGCCCCAATAACTCCGACACTTGCATTGGTCGGTTCCTTGGCCGCCTCTCCTTTCAACCCTTCAAGGAAAACCCACTTCTTGGGCCGTCTTCAACCACATTGGAAAAGATGGGTGCTCTGGACGCGCAGAGAGTGGTTCATCAACACCAGGGATGGCGGCTGATCTCTTGTATGTGGTTACATGCTGGAGTTTTCCATGTGCTTGCCAATATGCTGAGTCTTGTATTCATTGGAATTCGGCTTGAGCAAGAATTTGGATTTGTTCGAATTGGTTTCCTATATCTCATGTCTGGTTTTGGTGGGAGTTTGCTTTCAGCTCTTTTTATTCAATATGGTATTTCTGTTGGTGCTTCTGGTGCACTTTTTGGTTTACTAGGAAGCATGCTTTCAGAGCTCATATCAAATTGGACAATGTATGTAAATAAGTTAGCAGCATTGCTTACTCTCCTTTTCATCATCATAATAAACTTAGCAGTGGGAATTCTACCACATGTGGACAACTTTGCTCATATTGGAGGATTTGTCTCCGGATTTCTTCTTGGATTTTTGTTTTTGATCCGCCCCCAGTTTAAATGGCTTACCCAACGTAATGCTCCCCCTGGACGTGTTAGTACTCCAGTTAAATCTAAACACAAGACGTATCAATATGTATTGTGGGTCCTCTCTTTGATACTATTGATTGTTGGGTATACTCTTGGCCTGGTTACTCTTTTTCGAGGGGTCAATCTAAACAATCACTGCTCCTGGTGTCATTATTTGAGCTGTGTCCCTACGTCAAAATGGAATTGCAAGTCACAAAATATTTATTGTTTGTCGAGCCAGATAGGGAATCAGCTGAACTTAACGTGCGTAAGCAACGGTAGAAATGGAACATATTCGTTGTCGGATCCCAGCCCCTCCCGGACTCAGCAGCTATGTGCTGAGCTTTGCAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0002791 GO:0002792 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0006928 GO:0008150 GO:0008283 GO:0009894 GO:0009966 GO:0009987 GO:0010646 GO:0012505 GO:0016020 GO:0016477 GO:0019222 GO:0023051 GO:0030162 GO:0031090 GO:0031323 GO:0031329 GO:0031984 GO:0032268 GO:0032879 GO:0032880 GO:0040011 GO:0042058 GO:0042175 GO:0042176 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048870 GO:0050708 GO:0050709 GO:0050789 GO:0050794 GO:0051046 GO:0051048 GO:0051049 GO:0051051 GO:0051171 GO:0051179 GO:0051223 GO:0051224 GO:0051246 GO:0051674 GO:0060255 GO:0061136 GO:0065007 GO:0070201 GO:0080090 GO:0090087 GO:0098588 GO:0098791 GO:0098827 GO:1901184 GO:1903050 GO:1903362 GO:1903530 GO:1903531 GO:1904950

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rhomboid

Protein Analysis

387

Amino Acids

42.78

Weight (kDa)

9.39

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhomboid	PF01694	124 - 260	3.8e-41	Rhomboid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002566)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G29050 AT2G29050
fragaria_vesca	FvH4_3g36420 FvH4_3g36420 FvH4_3g36420 FvH4_3g36420
malus_domestica	MD00G1013900.v1.1 MD00G1178600.v1.1 MD00G1178800.v1.1 MD03G1090500.v1.1 MD11G1100200.v1.1 MD11G1101200.v1.1 MD11G1101800.v1.1 MD11G1102100.v1.1 MD11G1104300.v1.1 MD11G1105000.v1.1 MD11G1106000.v1.1 MD11G1106300.v1.1 MD11G1106700.v1.1 MD11G1106900.v1.1 MD11G1107000.v1.1 MD11G1107900.v1.1 MD11G1261200.v1.1 MD15G1402100.v1.1
prunus_persica	Prupe.6G074600_v2.0.a1
pyrus_communis	pycom03g07200 pycom11g08440
rosa_chinensis	RchiOBHm_Chr5g0065311
rosa_laevigata	RLG00000035780 RLG00000035781 RLG00000035782
rosa_multiflora	Rmu_sc0009942.1_g000006 Rmu_sc0013827.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015870
rosa_rugosa	Rorug05G0371200
rosa_samantha	Rh5AG429000 Rh5BG444300 Rh5CG466500 Rh5DG456600
rosa_wichuraiana	Rw5G040270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	166
AccB7I	CCANNNNNTGG	1 cut(s)	305
AccI	GTMKAC	1 cut(s)	914
AccII	CGCG	1 cut(s)	350
AccIII	TCCGGA	2 cut(s)	97, 752
AciI	CCGC	5 cut(s)	61, 118, 268, 382, 784
AclI	AACGTT	1 cut(s)	72
AclWI	GGATC	3 cut(s)	775, 1106, 1119
AcoI	YGGCCR	2 cut(s)	183, 265
AcsI	RAATTY	3 cut(s)	459, 476, 705
AcyI	GRCGYC	1 cut(s)	110
AfaI	GTAC	1 cut(s)	838
AfiI	CCNNNNNNNGG	1 cut(s)	305
AflIII	ACRYGT	2 cut(s)	715, 829
AgsI	TTSAA	5 cut(s)	145, 281, 289, 318, 554
AjiI	CACGTC	1 cut(s)	830
AjnI	CCWGG	5 cut(s)	82, 372, 823, 924, 968
AluBI	AGCT	7 cut(s)	33, 542, 619, 987, 1060, 1138, 1150
AluI	AGCT	7 cut(s)	33, 542, 619, 987, 1060, 1138, 1150
Alw21I	GWGCWC	4 cut(s)	81, 343, 586, 621
Alw26I	GTCTC	2 cut(s)	95, 754
Alw44I	GTGCAC	2 cut(s)	77, 582
AlwI	GGATC	3 cut(s)	775, 1106, 1119
Aor13HI	TCCGGA	2 cut(s)	97, 752
AoxI	GGCC	5 cut(s)	10, 183, 265, 308, 922
ApaLI	GTGCAC	2 cut(s)	77, 582
ApeKI	GCWGC	4 cut(s)	20, 30, 656, 1135
ApoI	RAATTY	3 cut(s)	459, 476, 705
Asp700I	GAANNNNTTC	1 cut(s)	1099
AspLEI	GCGC	2 cut(s)	25, 352
AspS9I	GGNCC	2 cut(s)	308, 883
AsuC2I	CCSGG	1 cut(s)	1126
AsuHPI	GGTGA	2 cut(s)	61, 217
AsuII	TTCGAA	1 cut(s)	490
AvaII	GGWCC	1 cut(s)	883
BaeGI	GKGCMC	2 cut(s)	81, 586
BalI	TGGCCA	1 cut(s)	185
BamHI	GGATCC	1 cut(s)	1111
BanI	GGYRCC	1 cut(s)	166
BanII	GRGCYC	1 cut(s)	621
BbsI	GAAGAC	1 cut(s)	306
Bbv12I	GWGCWC	4 cut(s)	81, 343, 586, 621
BbvI	GCAGC	4 cut(s)	7, 42, 668, 1147
BccI	CCATC	2 cut(s)	328, 372
BceAI	ACGGC	3 cut(s)	74, 154, 295
BciT130I	CCWGG	5 cut(s)	84, 374, 825, 926, 970
BcnI	CCSGG	1 cut(s)	1126
BcoDI	GTCTC	2 cut(s)	95, 754
BfaI	CTAG	1 cut(s)	599
BfmI	CTRYAG	1 cut(s)	133
BisI	GCNGC	6 cut(s)	21, 31, 268, 383, 657, 1136
BlpI	GCTNAGC	1 cut(s)	1146
BlsI	GCNGC	6 cut(s)	22, 32, 269, 384, 658, 1137
BmcAI	AGTACT	1 cut(s)	838
Bme1390I	CCNGG	6 cut(s)	84, 374, 825, 926, 970, 1126
Bme18I	GGWCC	1 cut(s)	883
BmgBI	CACGTC	1 cut(s)	830
BmgT120I	GGNCC	2 cut(s)	308, 883
BmiI	GGNNCC	4 cut(s)	168, 260, 884, 1113
BmrFI	CCNGG	6 cut(s)	84, 374, 825, 926, 970, 1126
BmrI	ACTGGG	1 cut(s)	784
BmuI	ACTGGG	1 cut(s)	784
BpiI	GAAGAC	1 cut(s)	306
BpmI	CTGGAG	2 cut(s)	432, 825
Bpu1102I	GCTNAGC	1 cut(s)	1146
Bpu14I	TTCGAA	1 cut(s)	490
BpuEI	CTTGAG	1 cut(s)	488
BpuMI	CCSGG	1 cut(s)	1126
BsaHI	GRCGYC	1 cut(s)	110
BsaJI	CCNNGG	7 cut(s)	56, 82, 83, 113, 262, 373, 823
BsaWI	WCCGGW	2 cut(s)	97, 752
BsaXI	ACNNNNNCTCC	2 cut(s)	732, 762
Bsc4I	CCNNNNNNNGG	1 cut(s)	305
Bse1I	ACTGG	2 cut(s)	790, 842
Bse3DI	GCAATG	1 cut(s)	659
BseAI	TCCGGA	2 cut(s)	97, 752
BseBI	CCWGG	5 cut(s)	84, 374, 825, 926, 970
BseDI	CCNNGG	7 cut(s)	56, 82, 83, 113, 262, 373, 823
BseGI	GGATG	1 cut(s)	383
BseLI	CCNNNNNNNGG	1 cut(s)	305
BseMI	GCAATG	1 cut(s)	659
BseMII	CTCAG	3 cut(s)	431, 1137, 1145
BseNI	ACTGG	2 cut(s)	790, 842
BseSI	GKGCMC	2 cut(s)	81, 586
BseXI	GCAGC	4 cut(s)	7, 42, 668, 1147
BseYI	CCCAGC	1 cut(s)	1115
Bsh1236I	CGCG	1 cut(s)	350
Bsh1285I	CGRYCG	1 cut(s)	122
BshFI	GGCC	5 cut(s)	12, 185, 267, 310, 924
BshNI	GGYRCC	1 cut(s)	166
BsiEI	CGRYCG	1 cut(s)	122
BsiHKAI	GWGCWC	4 cut(s)	81, 343, 586, 621
BsiSI	CCGG	3 cut(s)	98, 753, 1126
BslFI	GGGAC	2 cut(s)	102, 977
BslI	CCNNNNNNNGG	1 cut(s)	305
BsmAI	GTCTC	2 cut(s)	95, 754
BsmBI	CGTCTC	1 cut(s)	95
BsmFI	GGGAC	2 cut(s)	102, 977
BsnI	GGCC	5 cut(s)	12, 185, 267, 310, 924
Bsp119I	TTCGAA	1 cut(s)	490
Bsp1286I	GDGCHC	4 cut(s)	81, 343, 586, 621
Bsp13I	TCCGGA	2 cut(s)	97, 752
Bsp143I	GATC	3 cut(s)	387, 780, 1111
Bsp1720I	GCTNAGC	1 cut(s)	1146
BspACI	CCGC	5 cut(s)	61, 118, 268, 382, 784
BspANI	GGCC	5 cut(s)	12, 185, 267, 310, 924
BspCNI	CTCAG	3 cut(s)	432, 1138, 1144
BspEI	TCCGGA	2 cut(s)	97, 752
BspFNI	CGCG	1 cut(s)	350
BspLI	GGNNCC	4 cut(s)	168, 260, 884, 1113
BspPI	GGATC	3 cut(s)	775, 1106, 1119
BspT104I	TTCGAA	1 cut(s)	490
BspT107I	GGYRCC	1 cut(s)	166
BsrDI	GCAATG	1 cut(s)	659
BsrI	ACTGG	2 cut(s)	790, 842
BssECI	CCNNGG	7 cut(s)	56, 82, 83, 113, 262, 373, 823
BssMI	GATC	3 cut(s)	387, 780, 1111
BssNAI	GTATAC	1 cut(s)	915
BssNI	GRCGYC	1 cut(s)	110
BssT1I	CCWWGG	1 cut(s)	262
Bst1107I	GTATAC	1 cut(s)	915
Bst2UI	CCWGG	5 cut(s)	84, 374, 825, 926, 970
Bst4CI	ACNGT	1 cut(s)	1085
Bst6I	CTCTTC	1 cut(s)	140
BstACI	GRCGYC	1 cut(s)	110
BstBI	TTCGAA	1 cut(s)	490
BstC8I	GCNNGC	2 cut(s)	429, 608
BstDEI	CTNAG	5 cut(s)	34, 440, 694, 1131, 1146
BstDSI	CCRYGG	1 cut(s)	56
BstF5I	GGATG	1 cut(s)	383
BstFNI	CGCG	1 cut(s)	350
BstHHI	GCGC	2 cut(s)	25, 352
BstKTI	GATC	3 cut(s)	390, 783, 1114
BstMAI	GTCTC	2 cut(s)	95, 754
BstMBI	GATC	3 cut(s)	387, 780, 1111
BstMCI	CGRYCG	1 cut(s)	122
BstMWI	GCNNNNNNNGC	4 cut(s)	135, 347, 581, 616
BstNI	CCWGG	5 cut(s)	84, 374, 825, 926, 970
BstNSI	RCATGY	3 cut(s)	410, 610, 719
BstSCI	CCNGG	6 cut(s)	82, 372, 823, 924, 968, 1124
BstSFI	CTRYAG	1 cut(s)	133
BstSLI	GKGCMC	2 cut(s)	81, 586
BstUI	CGCG	1 cut(s)	350
BstV1I	GCAGC	4 cut(s)	7, 42, 668, 1147
BstV2I	GAAGAC	1 cut(s)	306
BstX2I	RGATCY	1 cut(s)	1111
BstXI	CCANNNNNNTGG	1 cut(s)	193
BstYI	RGATCY	1 cut(s)	1111
BstZ17I	GTATAC	1 cut(s)	915
BsuRI	GGCC	5 cut(s)	12, 185, 267, 310, 924
BtgI	CCRYGG	1 cut(s)	56
BtrI	CACGTC	1 cut(s)	830
BtsCI	GGATG	1 cut(s)	383
BtsI	GCAGTG	2 cut(s)	705, 961
BtsIMutI	CAGTG	2 cut(s)	705, 961
Cac8I	GCNNGC	2 cut(s)	429, 608
CfoI	GCGC	2 cut(s)	25, 352
Cfr13I	GGNCC	2 cut(s)	308, 883
CseI	GACGC	2 cut(s)	118, 356
Csp6I	GTAC	1 cut(s)	837
CviAII	CATG	6 cut(s)	159, 407, 422, 511, 607, 716
CviQI	GTAC	1 cut(s)	837
DdeI	CTNAG	5 cut(s)	34, 440, 694, 1131, 1146
DpnI	GATC	3 cut(s)	389, 782, 1113
DpnII	GATC	3 cut(s)	387, 780, 1111
DraI	TTTAAA	1 cut(s)	796
EaeI	YGGCCR	2 cut(s)	183, 265
Eam1104I	CTCTTC	1 cut(s)	140
EarI	CTCTTC	1 cut(s)	140
EciI	GGCGGA	2 cut(s)	76, 773
Ecl136II	GAGCTC	1 cut(s)	619
Eco130I	CCWWGG	1 cut(s)	262
Eco24I	GRGCYC	1 cut(s)	621
Eco47I	GGWCC	1 cut(s)	883
Eco53kI	GAGCTC	1 cut(s)	619
EcoICRI	GAGCTC	1 cut(s)	619
EcoO109I	RGGNCCY	1 cut(s)	883
EcoRI	GAATTC	2 cut(s)	459, 705
EcoRII	CCWGG	5 cut(s)	82, 372, 823, 924, 968
EcoT14I	CCWWGG	1 cut(s)	262
EcoT38I	GRGCYC	1 cut(s)	621
ErhI	CCWWGG	1 cut(s)	262
Esp3I	CGTCTC	1 cut(s)	95
FaeI	CATG	6 cut(s)	162, 410, 425, 514, 610, 719
FaqI	GGGAC	2 cut(s)	102, 977
FatI	CATG	6 cut(s)	158, 406, 421, 510, 606, 715
FblI	GTMKAC	1 cut(s)	914
Fnu4HI	GCNGC	6 cut(s)	21, 31, 268, 383, 657, 1136
FokI	GGATG	1 cut(s)	390
FriOI	GRGCYC	1 cut(s)	621
Fsp4HI	GCNGC	6 cut(s)	21, 31, 268, 383, 657, 1136
FspBI	CTAG	1 cut(s)	599
GlaI	GCGC	2 cut(s)	24, 351
GluI	GCNGC	6 cut(s)	21, 31, 268, 383, 657, 1136
GsaI	CCCAGC	1 cut(s)	1119
GsuI	CTGGAG	2 cut(s)	432, 825
HaeIII	GGCC	5 cut(s)	12, 185, 267, 310, 924
HapII	CCGG	3 cut(s)	98, 753, 1126
HgaI	GACGC	2 cut(s)	118, 356
HhaI	GCGC	2 cut(s)	25, 352
Hin1I	GRCGYC	1 cut(s)	110
Hin1II	CATG	6 cut(s)	162, 410, 425, 514, 610, 719
Hin6I	GCGC	2 cut(s)	23, 350
HinP1I	GCGC	2 cut(s)	23, 350
HinfI	GANTC	4 cut(s)	52, 442, 1054, 1129
HpaII	CCGG	3 cut(s)	98, 753, 1126
HphI	GGTGA	2 cut(s)	61, 217
Hpy166II	GTNNAC	7 cut(s)	56, 79, 220, 584, 596, 721, 915
Hpy188I	TCNGA	3 cut(s)	241, 616, 1111
Hpy188III	TCNNGA	3 cut(s)	98, 344, 753
Hpy8I	GTNNAC	7 cut(s)	56, 79, 220, 584, 596, 721, 915
Hpy99I	CGWCG	3 cut(s)	109, 112, 175
HpyAV	CCTTC	1 cut(s)	295
HpyCH4III	ACNGT	1 cut(s)	1085
HpyCH4IV	ACGT	6 cut(s)	72, 811, 829, 863, 998, 1070
HpyCH4V	TGCA	5 cut(s)	79, 249, 584, 1014, 1155
HpyF10VI	GCNNNNNNNGC	4 cut(s)	135, 347, 581, 616
HpyF3I	CTNAG	5 cut(s)	34, 440, 694, 1131, 1146
HpySE526I	ACGT	6 cut(s)	72, 811, 829, 863, 998, 1070
Hsp92I	GRCGYC	1 cut(s)	110
Hsp92II	CATG	6 cut(s)	162, 410, 425, 514, 610, 719
HspAI	GCGC	2 cut(s)	23, 350
Kpn2I	TCCGGA	2 cut(s)	97, 752
Kzo9I	GATC	3 cut(s)	387, 780, 1111
LmnI	GCTCC	3 cut(s)	63, 823, 971
Lsp1109I	GCAGC	4 cut(s)	7, 42, 668, 1147
MaeI	CTAG	1 cut(s)	599
MaeII	ACGT	6 cut(s)	72, 811, 829, 863, 998, 1070
MaeIII	GTNAC	4 cut(s)	205, 402, 928, 1017
MalI	GATC	3 cut(s)	389, 782, 1113
MboI	GATC	3 cut(s)	387, 780, 1111
MboII	GAAGA	3 cut(s)	157, 306, 752
MflI	RGATCY	1 cut(s)	1111
MhlI	GDGCHC	4 cut(s)	81, 343, 586, 621
MlsI	TGGCCA	1 cut(s)	185
MluCI	AATT	7 cut(s)	14, 459, 476, 492, 628, 705, 1009
MluNI	TGGCCA	1 cut(s)	185
MlyI	GAGTC	3 cut(s)	61, 451, 1123
MmeI	TCCRAC	2 cut(s)	264, 1089
MnlI	CCTC	8 cut(s)	105, 123, 141, 281, 734, 896, 935, 1132
Mox20I	TGGCCA	1 cut(s)	185
MroI	TCCGGA	2 cut(s)	97, 752
MroXI	GAANNNNTTC	1 cut(s)	1099
MscI	TGGCCA	1 cut(s)	185
MseI	TTAA	3 cut(s)	795, 846, 1067
Msp20I	TGGCCA	1 cut(s)	185
MspA1I	CMGCKG	1 cut(s)	1060
MspI	CCGG	3 cut(s)	98, 753, 1126
MspR9I	CCNGG	6 cut(s)	84, 374, 825, 926, 970, 1126
MvaI	CCWGG	5 cut(s)	84, 374, 825, 926, 970
MvnI	CGCG	1 cut(s)	350
MwoI	GCNNNNNNNGC	4 cut(s)	135, 347, 581, 616
NciI	CCSGG	1 cut(s)	1126
NdeII	GATC	3 cut(s)	387, 780, 1111
NlaIII	CATG	6 cut(s)	162, 410, 425, 514, 610, 719
NlaIV	GGNNCC	4 cut(s)	168, 260, 884, 1113
NmeAIII	GCCGAG	2 cut(s)	51, 94
NmuCI	GTSAC	2 cut(s)	205, 1017
NspI	RCATGY	3 cut(s)	410, 610, 719
NspV	TTCGAA	1 cut(s)	490
PaeI	GCATGC	1 cut(s)	610
PasI	CCCWGGG	1 cut(s)	83
PciI	ACATGT	1 cut(s)	715
PdmI	GAANNNNTTC	1 cut(s)	1099
PfeI	GAWTC	1 cut(s)	1054
PflMI	CCANNNNNTGG	1 cut(s)	305
PfoI	TCCNGGA	1 cut(s)	1124
PkrI	GCNGC	6 cut(s)	22, 32, 269, 384, 658, 1137
PleI	GAGTC	3 cut(s)	60, 450, 1123
PpsI	GAGTC	3 cut(s)	60, 450, 1123
PpuMI	RGGWCCY	1 cut(s)	883
PscI	ACATGT	1 cut(s)	715
Psp124BI	GAGCTC	1 cut(s)	621
Psp1406I	AACGTT	1 cut(s)	72
Psp5II	RGGWCCY	1 cut(s)	883
Psp6I	CCWGG	5 cut(s)	82, 372, 823, 924, 968
PspFI	CCCAGC	1 cut(s)	1115
PspGI	CCWGG	5 cut(s)	82, 372, 823, 924, 968
PspN4I	GGNNCC	4 cut(s)	168, 260, 884, 1113
PspPI	GGNCC	2 cut(s)	308, 883
PspPPI	RGGWCCY	1 cut(s)	883
PsuI	RGATCY	1 cut(s)	1111
PvuII	CAGCTG	1 cut(s)	1060
RsaI	GTAC	1 cut(s)	838
RsaNI	GTAC	1 cut(s)	837
SacI	GAGCTC	1 cut(s)	621
SaqAI	TTAA	3 cut(s)	795, 846, 1067
SatI	GCNGC	6 cut(s)	21, 31, 268, 383, 657, 1136
Sau3AI	GATC	3 cut(s)	387, 780, 1111
Sau96I	GGNCC	2 cut(s)	308, 883
ScaI	AGTACT	1 cut(s)	838
SchI	GAGTC	3 cut(s)	61, 451, 1123
ScrFI	CCNGG	6 cut(s)	84, 374, 825, 926, 970, 1126
SduI	GDGCHC	4 cut(s)	81, 343, 586, 621
SfcI	CTRYAG	1 cut(s)	133
SfuI	TTCGAA	1 cut(s)	490
SinI	GGWCC	1 cut(s)	883
SmlI	CTYRAG	1 cut(s)	467
SmoI	CTYRAG	1 cut(s)	467
SphI	GCATGC	1 cut(s)	610
Sse9I	AATT	7 cut(s)	14, 459, 476, 492, 628, 705, 1009
SsiI	CCGC	5 cut(s)	61, 118, 268, 382, 784
SspI	AATATT	1 cut(s)	1027
SspMI	CTAG	1 cut(s)	599
SstI	GAGCTC	1 cut(s)	621
StyD4I	CCNGG	6 cut(s)	82, 372, 823, 924, 968, 1124
StyI	CCWWGG	1 cut(s)	262
TaaI	ACNGT	1 cut(s)	1085
TaiI	ACGT	6 cut(s)	75, 814, 832, 866, 1001, 1073
TaqI	TCGA	4 cut(s)	173, 490, 940, 1040
TasI	AATT	7 cut(s)	14, 459, 476, 492, 628, 705, 1009
TatI	WGTACW	1 cut(s)	836
TauI	GCSGC	2 cut(s)	270, 385
TfiI	GAWTC	1 cut(s)	1054
Tru1I	TTAA	3 cut(s)	795, 846, 1067
Tru9I	TTAA	3 cut(s)	795, 846, 1067
TscAI	CASTG	2 cut(s)	705, 968
TseFI	GTSAC	2 cut(s)	205, 1017
TseI	GCWGC	4 cut(s)	20, 30, 656, 1135
Tsp45I	GTSAC	2 cut(s)	205, 1017
TspDTI	ATGAA	3 cut(s)	353, 442, 667
TspRI	CASTG	2 cut(s)	705, 968
Van91I	CCANNNNNTGG	1 cut(s)	305
VneI	GTGCAC	2 cut(s)	77, 582
VpaK11BI	GGWCC	1 cut(s)	883
XapI	RAATTY	3 cut(s)	459, 476, 705
XceI	RCATGY	3 cut(s)	410, 610, 719
XmiI	GTMKAC	1 cut(s)	914
XmnI	GAANNNNTTC	1 cut(s)	1099
XspI	CTAG	1 cut(s)	599
ZrmI	AGTACT	1 cut(s)	838

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.